BLASTX nr result
ID: Cocculus23_contig00019574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00019574
(834 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB55400.1| hypothetical protein L484_016768 [Morus notabilis] 86 7e-17
ref|XP_004501051.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-16
ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago t... 85 3e-16
ref|XP_007226519.1| hypothetical protein PRUPE_ppa025518mg [Prun... 82 6e-16
ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago t... 84 9e-16
ref|XP_006339746.1| PREDICTED: pentatricopeptide repeat-containi... 82 3e-13
ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containi... 82 3e-13
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-12
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi... 77 6e-12
emb|CBI40590.3| unnamed protein product [Vitis vinifera] 77 6e-12
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera] 77 6e-12
ref|XP_006292869.1| hypothetical protein CARUB_v10019129mg [Caps... 77 1e-11
ref|XP_007150033.1| hypothetical protein PHAVU_005G120400g [Phas... 76 1e-11
ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 76 2e-11
ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat... 76 2e-11
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis] 75 2e-11
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr... 75 2e-11
ref|XP_007214997.1| hypothetical protein PRUPE_ppa002316mg [Prun... 75 2e-11
ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containi... 75 3e-11
gb|ADE76509.1| unknown [Picea sitchensis] 75 3e-11
>gb|EXB55400.1| hypothetical protein L484_016768 [Morus notabilis]
Length = 508
Score = 86.3 bits (212), Expect(2) = 7e-17
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -1
Query: 795 RKVLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNE 616
R VLLANMYA MG WE V+ LR++M+ER V WSFIEV+G VH+FV DDKSH +L
Sbjct: 426 RYVLLANMYADMGCWEDVMRLRKMMEEREVVKSFAWSFIEVDGVVHKFVADDKSHPKLRS 485
Query: 615 IYGLLCLLNKDLSA 574
IY +L L ++L +
Sbjct: 486 IYRILDQLKRELKS 499
Score = 28.1 bits (61), Expect(2) = 7e-17
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2
Query: 833 VGKQLIQVEPQHSGR 789
VGK LIQ+EP HSGR
Sbjct: 412 VGKLLIQLEPTHSGR 426
>ref|XP_004501051.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cicer arietinum]
Length = 534
Score = 84.0 bits (206), Expect(2) = 2e-16
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = -1
Query: 795 RKVLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNE 616
R VLLANMYA +G+WEGV E+R+LMK+RGV + WSFIE++ +H+FV DDK+ E
Sbjct: 448 RYVLLANMYANVGKWEGVSEIRKLMKDRGVLFISAWSFIEIDQTIHKFVADDKNCLYSRE 507
Query: 615 IYGLLCLLNKDL 580
IY +L L K L
Sbjct: 508 IYEVLSHLGKKL 519
Score = 28.9 bits (63), Expect(2) = 2e-16
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2
Query: 833 VGKQLIQVEPQHSGR 789
VGK LI+ EPQHSGR
Sbjct: 434 VGKYLIEFEPQHSGR 448
>ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 515
Score = 84.7 bits (208), Expect(2) = 3e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -1
Query: 795 RKVLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNE 616
R VLLANMYA MG+WEGV E+R+LMK+RGV V GWSFIE++ +H+F DDK E
Sbjct: 427 RYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFADDKCCLYSRE 486
Query: 615 IYGLLCLLNK 586
IY +L L K
Sbjct: 487 IYDVLSHLGK 496
Score = 27.3 bits (59), Expect(2) = 3e-16
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 833 VGKQLIQVEPQHSGR 789
VGK LI+ EP+HSGR
Sbjct: 413 VGKYLIEFEPKHSGR 427
>ref|XP_007226519.1| hypothetical protein PRUPE_ppa025518mg [Prunus persica]
gi|462423455|gb|EMJ27718.1| hypothetical protein
PRUPE_ppa025518mg [Prunus persica]
Length = 528
Score = 82.0 bits (201), Expect(2) = 6e-16
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = -1
Query: 795 RKVLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNE 616
R VLLANMYA MG WE +R++MK+R V WSFIE++G VH+FV DDKSH +
Sbjct: 445 RYVLLANMYAEMGNWEDATRIRKMMKDREVVTSSAWSFIEIDGVVHKFVADDKSHSHSRK 504
Query: 615 IYGLLCLLNKDL 580
IY L L +DL
Sbjct: 505 IYKTLNQLRRDL 516
Score = 29.3 bits (64), Expect(2) = 6e-16
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2
Query: 833 VGKQLIQVEPQHSGR 789
VGK LI++EPQHSGR
Sbjct: 431 VGKLLIELEPQHSGR 445
>ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 629
Score = 84.0 bits (206), Expect(2) = 9e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -1
Query: 795 RKVLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNE 616
R VLLANMYA MG+WEGV E+R+LMK+RGV V GWSFIE++ +H+F DDK E
Sbjct: 463 RYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIEIDQTLHKFSADDKCCLYSGE 522
Query: 615 IYGLLCLLNK 586
IY +L L K
Sbjct: 523 IYEVLSHLGK 532
Score = 26.6 bits (57), Expect(2) = 9e-16
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2
Query: 833 VGKQLIQVEPQHSGR 789
VGK LI+ +P+HSGR
Sbjct: 449 VGKYLIEFDPEHSGR 463
>ref|XP_006339746.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Solanum tuberosum]
Length = 508
Score = 81.6 bits (200), Expect = 3e-13
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
V+L+N+YA GRW+GV LR+LMK +T G+SFIE G++H+F+V+DKSH + NEIY
Sbjct: 423 VILSNIYARTGRWDGVARLRKLMKSSQITKAAGYSFIEEGGDIHKFIVEDKSHPKSNEIY 482
Query: 609 GLLCLLNKDL 580
LL L+ L
Sbjct: 483 SLLDLVTTRL 492
>ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Solanum lycopersicum]
Length = 508
Score = 81.6 bits (200), Expect = 3e-13
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
V+L+N+YA GRW+GV LR+LMK +T G+SFIE G++H+F+V+DKSH + NEIY
Sbjct: 423 VILSNIYARAGRWDGVARLRKLMKSSQITKAAGYSFIEEGGDIHKFIVEDKSHPKSNEIY 482
Query: 609 GLLCLLNKDL 580
LL L+ L
Sbjct: 483 SLLDLVTTRL 492
>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 74.7 bits (182), Expect(2) = 1e-12
Identities = 37/74 (50%), Positives = 50/74 (67%)
Frame = -1
Query: 795 RKVLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNE 616
R VLL+N+YAA GRW+ V ELRR+M+ER V+ G SFI++ +H FV D SH QL
Sbjct: 473 RYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEM 532
Query: 615 IYGLLCLLNKDLSA 574
IY L ++++L A
Sbjct: 533 IYAKLGEMSQELKA 546
Score = 25.0 bits (53), Expect(2) = 1e-12
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -2
Query: 833 VGKQLIQVEPQHSGR 789
VGK+L++++P H GR
Sbjct: 459 VGKRLLELDPNHGGR 473
>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 77.4 bits (189), Expect = 6e-12
Identities = 33/63 (52%), Positives = 48/63 (76%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
V+L+N+YA GRW+GV LR+LMK +T G+SFIE G++H+F+V+D+SH + +EIY
Sbjct: 423 VILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIY 482
Query: 609 GLL 601
LL
Sbjct: 483 ALL 485
>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 77.4 bits (189), Expect = 6e-12
Identities = 33/63 (52%), Positives = 48/63 (76%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
V+L+N+YA GRW+GV LR+LMK +T G+SFIE G++H+F+V+D+SH + +EIY
Sbjct: 380 VILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIY 439
Query: 609 GLL 601
LL
Sbjct: 440 ALL 442
>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 77.4 bits (189), Expect = 6e-12
Identities = 33/63 (52%), Positives = 48/63 (76%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
V+L+N+YA GRW+GV LR+LMK +T G+SFIE G++H+F+V+D+SH + +EIY
Sbjct: 878 VILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIY 937
Query: 609 GLL 601
LL
Sbjct: 938 ALL 940
>ref|XP_006292869.1| hypothetical protein CARUB_v10019129mg [Capsella rubella]
gi|482561576|gb|EOA25767.1| hypothetical protein
CARUB_v10019129mg [Capsella rubella]
Length = 589
Score = 76.6 bits (187), Expect = 1e-11
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
VLL N Y+++G+WE V ELR LMKE+ + GWS IE+ G VH F+VDD SH ++ EIY
Sbjct: 423 VLLLNTYSSVGKWEKVTELRSLMKEKRIQTKPGWSAIELQGTVHEFIVDDVSHPRMEEIY 482
Query: 609 GLLCLLNKDL 580
L +N+ L
Sbjct: 483 KKLAEINQQL 492
>ref|XP_007150033.1| hypothetical protein PHAVU_005G120400g [Phaseolus vulgaris]
gi|561023297|gb|ESW22027.1| hypothetical protein
PHAVU_005G120400g [Phaseolus vulgaris]
Length = 514
Score = 76.3 bits (186), Expect = 1e-11
Identities = 33/70 (47%), Positives = 54/70 (77%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
VLL+N+YAA+G+W+G ++RR+MKERG+ + G+S IE++ ++H+FV DKSH + + +Y
Sbjct: 427 VLLSNIYAAVGKWDGANKVRRIMKERGIQKIPGFSSIEIDSSIHKFVAGDKSHEENDHVY 486
Query: 609 GLLCLLNKDL 580
L LL+ +L
Sbjct: 487 AALELLSFEL 496
>ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
VLL+NMY + RW+ +++RLMKERGV V GWS+IEVN NVH F+ D SH +IY
Sbjct: 612 VLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIY 671
Query: 609 GLLCLLNKDLS 577
LL +L ++++
Sbjct: 672 FLLEVLLEEIT 682
>ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
VLL+NMY + RW+ +++RLMKERGV V GWS+IEVN NVH F+ D SH +IY
Sbjct: 612 VLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIY 671
Query: 609 GLLCLLNKDLS 577
LL +L ++++
Sbjct: 672 FLLEVLLEEIT 682
>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
Length = 508
Score = 75.5 bits (184), Expect = 2e-11
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
VLLANMYAA+G+W+G ++R+ MK G+ G+S IE++ N+H FV DKSH N IY
Sbjct: 424 VLLANMYAAVGKWDGAGKVRKTMKALGIQKTPGFSSIEIDCNIHEFVAGDKSHVDKNCIY 483
Query: 609 GLLCLLNKDLSA 574
+L LL+ +L A
Sbjct: 484 SMLELLSSELKA 495
>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
gi|557096454|gb|ESQ36962.1| hypothetical protein
EUTSA_v10002407mg [Eutrema salsugineum]
Length = 784
Score = 75.5 bits (184), Expect = 2e-11
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
V L+NMYAA G+WE V E+R MK++G+ GWS IE G +HRF+V D+SH Q EIY
Sbjct: 617 VALSNMYAAAGKWEKVSEVRETMKKKGIKKEAGWSLIERKGVIHRFIVGDRSHPQSEEIY 676
Query: 609 GLLCLLNKDLSA 574
L + + L A
Sbjct: 677 AKLKEMREKLKA 688
>ref|XP_007214997.1| hypothetical protein PRUPE_ppa002316mg [Prunus persica]
gi|462411147|gb|EMJ16196.1| hypothetical protein
PRUPE_ppa002316mg [Prunus persica]
Length = 688
Score = 75.5 bits (184), Expect = 2e-11
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
V+L+N+YA+ GRW VL +RRLMK+RG+ G S+IEV VH F +D SHCQL EIY
Sbjct: 616 VMLSNIYASAGRWGDVLNIRRLMKDRGLKKSGGCSWIEVKNEVHCFYSEDASHCQLAEIY 675
Query: 609 GLLCLLNKDLSA 574
LL L+ ++ A
Sbjct: 676 DLLELVRFEMLA 687
>ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Fragaria vesca subsp. vesca]
Length = 764
Score = 75.1 bits (183), Expect = 3e-11
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
+LL+NMYA+ GRW+ V+ +R M+ GV GWS++E NG +H+F+ D+SH +EIY
Sbjct: 599 ILLSNMYASAGRWDDVVRVREAMRNAGVKKATGWSWVEYNGKMHKFIAGDRSHEMSDEIY 658
Query: 609 GLLCLLNKDL 580
LL L + L
Sbjct: 659 RLLAELGRKL 668
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 75.1 bits (183), Expect = 3e-11
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = -1
Query: 789 VLLANMYAAMGRWEGVLELRRLMKERGVTPVLGWSFIEVNGNVHRFVVDDKSHCQLNEIY 610
VLL+N+YAA GRW+ V ++R++MK+RGV G S+IEV VH F+V+DKSH Q EIY
Sbjct: 81 VLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIY 140
Query: 609 GLLCLLNKDLSA 574
L L + + A
Sbjct: 141 STLEELARQMEA 152