BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00019521
         (718 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGR55589.1| polyprotein [Soybean mosaic virus]                     124   4e-26
ref|YP_001816826.1| P1 protein [Telosma mosaic virus]                 119   1e-24
ref|YP_001427386.1| polyprotein [Telosma mosaic virus] gi|113367...   119   1e-24
ref|YP_001974419.1| polyprotein [Fritillary virus Y] gi|89267030...   119   1e-24
ref|YP_001974436.1| P1 protein [Fritillary virus Y]                   119   1e-24
ref|NP_734349.1| P1 protein [Bean common mosaic necrosis virus]       118   2e-24
ref|NP_660175.1| polyprotein [Bean common mosaic necrosis virus]...   118   2e-24
sp|P0CJ94.2|MVP_BCMNN RecName: Full=P3N-PIPO polyprotein; Contai...   118   2e-24
gb|AAP38183.1| polyprotein [Bean common mosaic necrosis virus]        118   2e-24
gb|AAN27999.1| polyprotein [Bean common mosaic necrosis virus]        118   2e-24
emb|CDK12644.1| polyprotein [Bean common mosaic necrosis virus]       117   3e-24
gb|ADR80231.1| polyprotein [Bean common mosaic necrosis virus]        117   4e-24
gb|ADR80232.1| polyprotein [Bean common mosaic necrosis virus]        117   4e-24
gb|ADR80233.1| polyprotein [Bean common mosaic necrosis virus]        116   7e-24
gb|AAW50598.1| polyprotein [Bean common mosaic necrosis virus]        115   1e-23
ref|YP_004940319.1| P1 protein [Yam bean mosaic virus]                114   4e-23
ref|YP_004936165.1| polyprotein [Yam bean mosaic virus] gi|35939...   114   4e-23
gb|ACZ13440.1| polyprotein [Watermelon mosaic virus]                  112   2e-22
emb|CAG25895.1| serine protease [Soybean mosaic virus]                111   2e-22
gb|AEP69134.1| polyprotein [Soybean mosaic virus]                     111   3e-22

>gb|AGR55589.1| polyprotein [Soybean mosaic virus]
          Length = 3219

 Score =  124 bits (310), Expect = 4e-26
 Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 13/213 (6%)
 Frame = +1

Query: 112 IVTPLMGEQPKCSSLNVAPEVMQPTPRSTYVTCGERYKTFNNQSQVE------------- 252
           +V P++G    CS  N+     Q    S  VT     ++  +  QV              
Sbjct: 136 LVQPMVGT---CSGNNICITNAQTKATSNIVTKDMMARSGPSSKQVSRALVVASRKEVDS 192

Query: 253 YNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKKLQRQQ 432
           YN AI+KMD  + KN  +Q+RL I + STI+++  GA+ L+  T+ QA  R+    +R+Q
Sbjct: 193 YNLAIKKMDEAMQKNPALQRRLFIQQQSTIKQQPKGAVQLRLCTYEQAKERDELARKRKQ 252

Query: 433 EDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRVDVVKL 612
           ED DFL GKYE  AY+G  AG ++   G SV FRT  +R TP+  K +  K++  +  ++
Sbjct: 253 EDEDFLNGKYEQQAYIGTAAGKIAKFAGGSVGFRTTHWRPTPKKTKTKRAKRQCGNPTRV 312

Query: 613 IDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
           ++EI++L   +GKP+EFI   +G   +  +V+K
Sbjct: 313 LEEILSLAARNGKPVEFITKHKGKNFKVNYVRK 345


>ref|YP_001816826.1| P1 protein [Telosma mosaic virus]
          Length = 317

 Score =  119 bits (298), Expect = 1e-24
 Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVTPLMGEQPKCSSLN----------VAPEVMQPTPRSTYVTCGERYKTFNN 237
           MA I+ G++  PL        SL           +    M  T +S+        K   +
Sbjct: 1   MASIVIGSVSIPLSCYSTGAISLPCDNTGTKSPLIVTRQMMATEKSSSKAVAYALKQVCS 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
           +    YN A+ KMD  L +++ +QKRL IN+ S I  +KN  L ++  +   A  R    
Sbjct: 61  KVAEPYNLAVMKMDLALKQDSELQKRLFINKFSPIVLRKNRTLGIRHLSLEHANERMNAA 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L R+QE+ DFLAG+Y + AY G V G      GSSV FRT FY+RTP+   QQP KK ++
Sbjct: 121 LLREQEEKDFLAGRYANCAYTGDVLGSTEPSRGSSVGFRTTFYKRTPKRVVQQPKKKAQL 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
            +  +  +++ +    GK +E+IG G+ A  R  FV++
Sbjct: 181 RLDNVFSQVMQIVSTYGKQVEYIGKGKNAHARVHFVQR 218


>ref|YP_001427386.1| polyprotein [Telosma mosaic virus] gi|113367110|gb|ABI34612.1|
           polyprotein [Telosma mosaic virus]
          Length = 3082

 Score =  119 bits (298), Expect = 1e-24
 Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVTPLMGEQPKCSSLN----------VAPEVMQPTPRSTYVTCGERYKTFNN 237
           MA I+ G++  PL        SL           +    M  T +S+        K   +
Sbjct: 1   MASIVIGSVSIPLSCYSTGAISLPCDNTGTKSPLIVTRQMMATEKSSSKAVAYALKQVCS 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
           +    YN A+ KMD  L +++ +QKRL IN+ S I  +KN  L ++  +   A  R    
Sbjct: 61  KVAEPYNLAVMKMDLALKQDSELQKRLFINKFSPIVLRKNRTLGIRHLSLEHANERMNAA 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L R+QE+ DFLAG+Y + AY G V G      GSSV FRT FY+RTP+   QQP KK ++
Sbjct: 121 LLREQEEKDFLAGRYANCAYTGDVLGSTEPSRGSSVGFRTTFYKRTPKRVVQQPKKKAQL 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
            +  +  +++ +    GK +E+IG G+ A  R  FV++
Sbjct: 181 RLDNVFSQVMQIVSTYGKQVEYIGKGKNAHARVHFVQR 218


>ref|YP_001974419.1| polyprotein [Fritillary virus Y] gi|89267030|emb|CAJ01678.1|
           polyprotein [Fritillary virus Y]
          Length = 3078

 Score =  119 bits (297), Expect = 1e-24
 Identities = 73/213 (34%), Positives = 114/213 (53%), Gaps = 4/213 (1%)
 Frame = +1

Query: 88  MAFIMFGTIVTPLMGEQPKCSSLN-VAPEVMQPTPRSTYVTCGERYKTFNNQSQVEYNEA 264
           MA I  G    PL    P C+ +  V P +  P   +  +T  +  +   +    +YN  
Sbjct: 1   MASITIGAFSVPLAIGAPMCTRVEAVRPAMNTPQAINKGLTV-QMCRAVGSMMVADYNAT 59

Query: 265 IEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALY-LQRPTFHQAVRRNMKKLQRQQEDA 441
           + K +  L KN  VQ+RLLIN HS ++  K    + L+  +F  AV+ NMK + +Q+E+ 
Sbjct: 60  MAKFEESLRKNTAVQRRLLINTHSAVKYNKFKKTHNLRHVSFSTAVQENMKLIAQQKEEQ 119

Query: 442 DFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKK--KRVDVVKLI 615
           DFL GK+E+  YVG +   ++   GSSV FRT  Y RT +      P +     DV KL+
Sbjct: 120 DFLDGKFENREYVGGIREPLNITKGSSVGFRTTHYTRTAKKRPVVAPIRTPHTTDVKKLL 179

Query: 616 DEIIALQRDSGKPLEFIGTGRGAPLRAKFVKKN 714
            E++   +   KP+EFIGTG+   ++AKF++++
Sbjct: 180 HEVLTTAKLMQKPVEFIGTGKRNVIKAKFIERH 212


>ref|YP_001974436.1| P1 protein [Fritillary virus Y]
          Length = 310

 Score =  119 bits (297), Expect = 1e-24
 Identities = 73/213 (34%), Positives = 114/213 (53%), Gaps = 4/213 (1%)
 Frame = +1

Query: 88  MAFIMFGTIVTPLMGEQPKCSSLN-VAPEVMQPTPRSTYVTCGERYKTFNNQSQVEYNEA 264
           MA I  G    PL    P C+ +  V P +  P   +  +T  +  +   +    +YN  
Sbjct: 1   MASITIGAFSVPLAIGAPMCTRVEAVRPAMNTPQAINKGLTV-QMCRAVGSMMVADYNAT 59

Query: 265 IEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALY-LQRPTFHQAVRRNMKKLQRQQEDA 441
           + K +  L KN  VQ+RLLIN HS ++  K    + L+  +F  AV+ NMK + +Q+E+ 
Sbjct: 60  MAKFEESLRKNTAVQRRLLINTHSAVKYNKFKKTHNLRHVSFSTAVQENMKLIAQQKEEQ 119

Query: 442 DFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKK--KRVDVVKLI 615
           DFL GK+E+  YVG +   ++   GSSV FRT  Y RT +      P +     DV KL+
Sbjct: 120 DFLDGKFENREYVGGIREPLNITKGSSVGFRTTHYTRTAKKRPVVAPIRTPHTTDVKKLL 179

Query: 616 DEIIALQRDSGKPLEFIGTGRGAPLRAKFVKKN 714
            E++   +   KP+EFIGTG+   ++AKF++++
Sbjct: 180 HEVLTTAKLMQKPVEFIGTGKRNVIKAKFIERH 212


>ref|NP_734349.1| P1 protein [Bean common mosaic necrosis virus]
          Length = 317

 Score =  118 bits (296), Expect = 2e-24
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVTPL-------MGEQPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I   +       M   PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSIAAEIPVIKEAIMIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  R+ K 
Sbjct: 61  NAIKAYDSQLKAFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDRKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>ref|NP_660175.1| polyprotein [Bean common mosaic necrosis virus]
           gi|3914397|sp|Q65399.1|POLG_BCMNN RecName: Full=Genome
           polyprotein; Contains: RecName: Full=P1 proteinase;
           AltName: Full=N-terminal protein; Contains: RecName:
           Full=Helper component proteinase; Short=HC-pro;
           Contains: RecName: Full=Protein P3; Contains: RecName:
           Full=6 kDa protein 1; Short=6K1; Contains: RecName:
           Full=Cytoplasmic inclusion protein; Short=CI; Contains:
           RecName: Full=6 kDa protein 2; Short=6K2; Contains:
           RecName: Full=Viral genome-linked protein; AltName:
           Full=VPg; Contains: RecName: Full=Nuclear inclusion
           protein A; Short=NI-a; Short=NIa; AltName: Full=49 kDa
           proteinase; Short=49 kDa-Pro; AltName: Full=NIa-pro;
           Contains: RecName: Full=Nuclear inclusion protein B;
           Short=NI-b; Short=NIb; AltName: Full=RNA-directed RNA
           polymerase; Contains: RecName: Full=Coat protein;
           Short=CP gi|1373002|gb|AAB02170.1| polyprotein [Bean
           common mosaic necrosis virus]
          Length = 3066

 Score =  118 bits (296), Expect = 2e-24
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVTPL-------MGEQPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I   +       M   PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSIAAEIPVIKEAIMIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  R+ K 
Sbjct: 61  NAIKAYDSQLKAFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDRKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>sp|P0CJ94.2|MVP_BCMNN RecName: Full=P3N-PIPO polyprotein; Contains: RecName: Full=P1
           proteinase; AltName: Full=N-terminal protein; Contains:
           RecName: Full=Helper component proteinase; Short=HC-pro;
           Contains: RecName: Full=Movement protein P3N-PIPO;
           AltName: Full=Pretty interesting potyviridae ORF;
           Short=PIPO
          Length = 999

 Score =  118 bits (296), Expect = 2e-24
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVTPL-------MGEQPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I   +       M   PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSIAAEIPVIKEAIMIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  R+ K 
Sbjct: 61  NAIKAYDSQLKAFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDRKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>gb|AAP38183.1| polyprotein [Bean common mosaic necrosis virus]
          Length = 3071

 Score =  118 bits (296), Expect = 2e-24
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVTPL-------MGEQPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I   +       M   PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSIAAEIPVIKEAIMIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  R+ K 
Sbjct: 61  NAIKAYDSQLKAFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDRKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>gb|AAN27999.1| polyprotein [Bean common mosaic necrosis virus]
          Length = 3071

 Score =  118 bits (296), Expect = 2e-24
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVTPL-------MGEQPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I   +       M   PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSIAAEIPVIKEAIMIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  R+ K 
Sbjct: 61  NAIKAYDSQLKAFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDRKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>emb|CDK12644.1| polyprotein [Bean common mosaic necrosis virus]
          Length = 3071

 Score =  117 bits (294), Expect = 3e-24
 Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVT--PLMGE-----QPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I    P++ E      PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSIAAEIPVIKEAIVIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  R+ K 
Sbjct: 61  NAIKAYDSQLKIFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDQKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>gb|ADR80231.1| polyprotein [Bean common mosaic necrosis virus]
          Length = 3071

 Score =  117 bits (293), Expect = 4e-24
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVT--PLMGE-----QPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I    P++ E      PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSITAEIPVIKEAIVIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+  QKRL I ++S I++KK GA +++  +F QA  R+ K 
Sbjct: 61  NAIKAYDSQLKAFDELLKKNSDPQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDQKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>gb|ADR80232.1| polyprotein [Bean common mosaic necrosis virus]
          Length = 3071

 Score =  117 bits (293), Expect = 4e-24
 Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 11/219 (5%)
 Frame = +1

Query: 88  MAFIMFGTIVT--PLMGE-------QPKCSSLNVAPEVMQPTPRSTYVTCGERY--KTFN 234
           MA IMFG+I    P++ E       +PK  +L+V     +     T    G+ Y  K F 
Sbjct: 1   MATIMFGSIAVEIPVIKEAIVIAMPEPK-HTLHVVQVEAKHMATETRSERGKLYVAKRFA 59

Query: 235 NQSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMK 414
           + +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  R  K
Sbjct: 60  DNAIKTYDSQLKAFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRNLSFKQAEVRRAK 119

Query: 415 KLQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKR 594
            L+ Q+E+  F +G YED AYVG V G +  +    VSF++ +Y+RT +  +Q    KK 
Sbjct: 120 YLKLQEEEHQFSSGAYEDKAYVGSVQGTLDRKVVEKVSFKSPYYKRTCKAVRQVKVLKKA 179

Query: 595 VDVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
           V   K++++++ +  ++G P+ F+G G    LRA++V++
Sbjct: 180 VGSEKVLNQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>gb|ADR80233.1| polyprotein [Bean common mosaic necrosis virus]
          Length = 3071

 Score =  116 bits (291), Expect = 7e-24
 Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 10/218 (4%)
 Frame = +1

Query: 88  MAFIMFGTIVT--PLMGE-----QPKCS-SLNVAPEVMQPTPRSTYVTCGERY--KTFNN 237
           MA IMFG+I    P++ E      PK   +L+V     +          G+ Y  K F +
Sbjct: 1   MATIMFGSIAAEIPVIKEAIVIAMPKSKHTLHVVQVEAKHMATEIRSERGKLYVAKRFAD 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
            +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +  QA  R+ K 
Sbjct: 61  NAIKAYDSQLKAFDELLKKNSDLQKRLFIGQNSPIKQKKGGACFVRNLSLKQAEERHAKY 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRV 597
           L+ Q+E+  FL+G Y D AYVG V G +  +    VSF++ +Y+RT +  +Q    KK V
Sbjct: 121 LKLQEEEHQFLSGAYGDKAYVGSVQGTLDRKVAEKVSFKSPYYKRTCKAVRQVKVLKKAV 180

Query: 598 DVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
              K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 181 GSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 218


>gb|AAW50598.1| polyprotein [Bean common mosaic necrosis virus]
          Length = 3169

 Score =  115 bits (288), Expect = 1e-23
 Identities = 57/163 (34%), Positives = 99/163 (60%)
 Frame = +1

Query: 223 KTFNNQSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVR 402
           K F + +   Y+  ++  D  L KN+ +QKRL I ++S I++KK GA +++  +F QA  
Sbjct: 154 KRFADNAIKAYDSQLKAFDGLLKKNSDLQKRLFIGQNSPIKQKKGGACFVRSLSFKQAEE 213

Query: 403 RNMKKLQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPP 582
           R+ K L+ Q+E+  FL+G Y D  YVG V G +  +    VSF++ +Y+RT +  +Q   
Sbjct: 214 RHAKYLKLQEEEHQFLSGAYGDKVYVGSVQGTLDRKVAEKVSFKSPYYKRTCKAVRQVKV 273

Query: 583 KKKRVDVVKLIDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKK 711
            KK V   K++D+++ +  ++G P+ F+G G    LRA++V++
Sbjct: 274 LKKAVGSGKVLDQVLEIVAETGVPVTFVGKGANKTLRAQYVRR 316


>ref|YP_004940319.1| P1 protein [Yam bean mosaic virus]
          Length = 317

 Score =  114 bits (284), Expect = 4e-23
 Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 15/223 (6%)
 Frame = +1

Query: 88  MAFIMFGTIVTPL----------MGEQPKCSSLNVAPEVMQPTPRSTYVTCGERYKTFNN 237
           MA IM G++  PL          + ++    +  V P+ +      +  +   +    + 
Sbjct: 1   MATIMIGSVQIPLSNMARNHHEKLEKRVVTQNSVVPPKSLMAVEMPSLRSISHKLSLASK 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
           + +  YN++I KMD  L +N+ +QKRLLIN++S I++KK+GA+ ++  T  QA  R  + 
Sbjct: 61  EMEAAYNDSIRKMDEALQRNSELQKRLLINKYSHIQQKKHGAVCIRHCTQMQATVRETRA 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPR--THKQQPPKKK 591
            QR++E+ DFLAG YE  +Y+G +   ++   G SV FR+ ++RR+ +   H ++ PKK 
Sbjct: 121 EQRRKEELDFLAGNYEHKSYIGSIIEPIARATGQSVGFRSPYWRRSIKKAVHMKKTPKK- 179

Query: 592 RVDVVKLIDEIIALQRDSGK---PLEFIGTGRGAPLRAKFVKK 711
            VDV  ++D    LQ  SG+    +EFIG  RG  L A++VK+
Sbjct: 180 -VDVCVVMD--ATLQMASGERRLTIEFIGK-RGRKLEARYVKR 218


>ref|YP_004936165.1| polyprotein [Yam bean mosaic virus] gi|359390878|gb|AEV45179.1|
           polyprotein [Yam bean mosaic virus]
          Length = 3084

 Score =  114 bits (284), Expect = 4e-23
 Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 15/223 (6%)
 Frame = +1

Query: 88  MAFIMFGTIVTPL----------MGEQPKCSSLNVAPEVMQPTPRSTYVTCGERYKTFNN 237
           MA IM G++  PL          + ++    +  V P+ +      +  +   +    + 
Sbjct: 1   MATIMIGSVQIPLSNMARNHHEKLEKRVVTQNSVVPPKSLMAVEMPSLRSISHKLSLASK 60

Query: 238 QSQVEYNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKK 417
           + +  YN++I KMD  L +N+ +QKRLLIN++S I++KK+GA+ ++  T  QA  R  + 
Sbjct: 61  EMEAAYNDSIRKMDEALQRNSELQKRLLINKYSHIQQKKHGAVCIRHCTQMQATVRETRA 120

Query: 418 LQRQQEDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPR--THKQQPPKKK 591
            QR++E+ DFLAG YE  +Y+G +   ++   G SV FR+ ++RR+ +   H ++ PKK 
Sbjct: 121 EQRRKEELDFLAGNYEHKSYIGSIIEPIARATGQSVGFRSPYWRRSIKKAVHMKKTPKK- 179

Query: 592 RVDVVKLIDEIIALQRDSGK---PLEFIGTGRGAPLRAKFVKK 711
            VDV  ++D    LQ  SG+    +EFIG  RG  L A++VK+
Sbjct: 180 -VDVCVVMD--ATLQMASGERRLTIEFIGK-RGRKLEARYVKR 218


>gb|ACZ13440.1| polyprotein [Watermelon mosaic virus]
          Length = 3220

 Score =  112 bits (279), Expect = 2e-22
 Identities = 57/154 (37%), Positives = 96/154 (62%)
 Frame = +1

Query: 253 YNEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKKLQRQQ 432
           YN AI+KMD  +  + ++Q+RLLI + STI++   GA+ L+  ++ QA +R     +R+Q
Sbjct: 193 YNLAIKKMDEAMKHDPVLQRRLLIQQQSTIKQLSKGAVQLRLCSYEQAKKRAELARKRKQ 252

Query: 433 EDADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRVDVVKL 612
           E+ DF  GKYE +AYVG  A + +   G SV FRT  +R TP+ +K +  KK+   ++ +
Sbjct: 253 EEEDFRNGKYEQLAYVGTTASNTTKLTGGSVGFRTIHWRPTPKQNKAKRVKKQCDKLIHV 312

Query: 613 IDEIIALQRDSGKPLEFIGTGRGAPLRAKFVKKN 714
           ++ +++L   SGKP+EFI   +    +  +V+K+
Sbjct: 313 LEGVLSLAAKSGKPVEFITKRKRKNFKVNYVRKH 346


>emb|CAG25895.1| serine protease [Soybean mosaic virus]
          Length = 309

 Score =  111 bits (278), Expect = 2e-22
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
 Frame = +1

Query: 88  MAFIMFGTIVTPLMGEQPKCSSLNVAPEVMQPTPRSTYVTCGERY--KTFNNQSQVEYNE 261
           MA IM G++   +      C+S +V P       +      G  Y  K   N    ++ E
Sbjct: 1   MATIMIGSMAISVPNTHISCASNSVMPVRAVQMAKQVPSVRGVLYTLKREGNTQVHKHEE 60

Query: 262 AIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKKLQRQQEDA 441
           A+ K      ++A +Q+RLL+N+HS+I+  K   L L+     QA  +     +R+QE+ 
Sbjct: 61  ALRKFQEAFDQDAGIQRRLLVNKHSSIQSTKKNGLTLRHLALEQARAKEAAIARRKQEEE 120

Query: 442 DFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRVDVVKLIDE 621
           DFL GKYE   Y G          G SV FRT ++R TP+  K++    +R     +++E
Sbjct: 121 DFLNGKYEQQFYAGVSTTKSMKSEGGSVGFRTKYWRPTPKKTKERRATSQRTKPTYVLEE 180

Query: 622 IIALQRDSGKPLEFIGTGRGAPLRAKFVKKN 714
           ++++   SGKP+EFI  G+G  ++  +V+K+
Sbjct: 181 VLSIASKSGKPVEFITGGKGKRVKVCYVRKH 211


>gb|AEP69134.1| polyprotein [Soybean mosaic virus]
          Length = 3067

 Score =  111 bits (277), Expect = 3e-22
 Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 4/213 (1%)
 Frame = +1

Query: 88  MAFIMFGTIVTPLMGEQPKCSSLNVAPEVMQPTPRSTYVTCGE----RYKTFNNQSQVEY 255
           MA IM G++  P+   +  C+S  V P  +Q    +T V   +      K   N    ++
Sbjct: 1   MATIMIGSVAIPVPNTRISCASNTVMP--IQAVQMATQVPSAKGVLYTLKREGNTQVRKH 58

Query: 256 NEAIEKMDAFLHKNAIVQKRLLINEHSTIRRKKNGALYLQRPTFHQAVRRNMKKLQRQQE 435
            EA+ K      ++A  Q+RLL+N+HS+I+  K   L L+R T  QA  +     +R+QE
Sbjct: 59  EEALRKFQEAFDQDAGTQRRLLVNKHSSIQSTKKNGLTLRRLTLEQAREKEAAIARRRQE 118

Query: 436 DADFLAGKYEDVAYVGCVAGDMSAQNGSSVSFRTAFYRRTPRTHKQQPPKKKRVDVVKLI 615
           + DFL GKYE   Y G  A       G SV FRT ++R TP+  K++    +      ++
Sbjct: 119 EEDFLNGKYEQQFYAGVSATKSMKFEGGSVGFRTKYWRPTPKKTKERRATSQCRKPTYVL 178

Query: 616 DEIIALQRDSGKPLEFIGTGRGAPLRAKFVKKN 714
           +E++++   SGK +EFI  G+G  ++  +V+K+
Sbjct: 179 EEVLSIASRSGKLVEFITGGKGKRVKVCYVRKH 211