BLASTX nr result
ID: Cocculus23_contig00019502
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00019502
(1006 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac... 114 8e-32
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat... 125 2e-26
emb|CBI23503.3| unnamed protein product [Vitis vinifera] 108 3e-21
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct... 93 1e-19
gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativ... 98 5e-18
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 97 1e-17
ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobrom... 92 3e-16
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu... 91 1e-15
ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabac... 86 2e-14
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm... 55 6e-14
ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp.... 84 7e-14
ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, part... 64 1e-07
ref|YP_588305.1| hypothetical protein ZeamMp043 [Zea mays subsp.... 61 8e-07
>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
gi|56806590|dbj|BAD83491.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 162
Score = 114 bits (285), Expect(2) = 8e-32
Identities = 68/112 (60%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Frame = -2
Query: 489 GILAGPSPRSARWPIGIAAFGLCLPFLFLIE*GIPARPGKALATTERKGSM*LLRPPTE- 313
G++AGPSPRSA PIGIAAFGLCLPF+ + + A RK + +
Sbjct: 57 GMIAGPSPRSAL-PIGIAAFGLCLPFIIK-----NSGSARESAGNNRKEGVHVAAVSAPF 110
Query: 312 -----QQVRHLLQKIESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 172
QQVRHLLQK ESTSDNH SARQRVEWPRADLFGYIIQVES VTG AV
Sbjct: 111 LVNGAQQVRHLLQKRESTSDNHVSARQRVEWPRADLFGYIIQVESRVTGKAV 162
Score = 50.8 bits (120), Expect(2) = 8e-32
Identities = 29/55 (52%), Positives = 32/55 (58%)
Frame = -3
Query: 659 PTTKGKARRREGDAAGEGKRFRISRFDLFFSSKTKKAEDGLRCVLSEGNTLFRPR 495
PT KGKARRREG AAGEGKRFR SRF FF K ++ +G F R
Sbjct: 4 PTIKGKARRREGGAAGEGKRFRRSRF--FFHRKRRRPRMAYGASYLKGTRFFDRR 56
Score = 81.6 bits (200), Expect = 5e-13
Identities = 50/98 (51%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Frame = -1
Query: 634 EGREMRREKENAFGYRDLICFFHRKRRRPKMAYGACYLKGTRFFDRGGWYSCRALSSFRP 455
EG+ RR + FFHRKRRRP+MAYGA YLKGTRFFDR G + + S P
Sbjct: 20 EGKRFRRSR----------FFFHRKRRRPRMAYGASYLKGTRFFDRRGMIAGPSPRSALP 69
Query: 454 --LAHWDSCLRALPALSISNRIRNSGSARESAGNNRKE 347
+A + CL + I+NSGSARESAGNNRKE
Sbjct: 70 IGIAAFGLCLPFI--------IKNSGSARESAGNNRKE 99
>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
[Medicago truncatula]
Length = 1094
Score = 125 bits (315), Expect = 2e-26
Identities = 100/252 (39%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Frame = -3
Query: 728 PMLKPNPPHSERMPAK----------FR*GLEPPTTKGKARRREGDAAGEGKRFRISRFD 579
PM KP PP K F L+ +G+ RR G+ F F
Sbjct: 325 PMFKPTPPPHLNKAGKNARQVQIRECFPQPLKERLDEGREMRR-----GKENAFGDRYFF 379
Query: 578 LFFSSKTKKAEDGLRCVLSEGNTLFRPRWXXXXXXXXXXXXXXXXXXXXXXXACPFYF** 399
++ SSKTKKAEDGLRCVLSEGNTLFRPRW CP Y
Sbjct: 380 IYLSSKTKKAEDGLRCVLSEGNTLFRPRWYDLGPSPRSARRPLGIAAFVA---CPLY--- 433
Query: 398 NKEFRLGPGKRWQQQKGRGPCSCCARPLSSRFGIYYKR*NPLQITTPLPGSVWNGRERTF 219
LGPGKRWQQQKGRG P + P F
Sbjct: 434 -----LGPGKRWQQQKGRG---------------------PCSASAP------------F 455
Query: 218 LDI*SKSRVELREQPSDGKPLSRSVQRALFSLRIPRSLSCEFPSGELTTCGALSIPSLEP 39
L DG S + FS RI RSLSCEFPSGE T ALSIPSL+P
Sbjct: 456 L--------------VDGAAGSST----FFSSRILRSLSCEFPSGEFNTFWALSIPSLKP 497
Query: 38 RRKPPSPSDSIS 3
R KPPSPSDSIS
Sbjct: 498 RIKPPSPSDSIS 509
>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 108 bits (271), Expect = 3e-21
Identities = 63/113 (55%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Frame = -3
Query: 572 FSSKTKKAEDGLRCVLSEGNTLFRPRWXXXXXXXXXXXXXXXXXXXXXXXACPFYF**NK 393
FSSKTKKAEDGLRC+ + P + NK
Sbjct: 168 FSSKTKKAEDGLRCLRA----------------------------------LPALY--NK 191
Query: 392 EFRLGPGKRWQQQKGRGPCSCCARPL----SSRFGIYYKR*NPLQITTPLPGS 246
EFRLGPGKRWQQQKGRGPCSCCARPL SRFGIYYKR NPLQITTPL GS
Sbjct: 192 EFRLGPGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPLLGS 244
>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
Full=NADH dehydrogenase subunit 2
gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
subunit 2 [Beta vulgaris subsp. vulgaris]
Length = 515
Score = 92.8 bits (229), Expect(2) = 1e-19
Identities = 71/174 (40%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Frame = -2
Query: 489 GILAGPSPRSARWPIGIAAFGLCLPFLFLIE*GIPARPGKALATTERKGSM*LLRPPTEQ 310
G++ GPSPRSARWPIGIAAFGLCL LFLI+ AR A RK + +
Sbjct: 51 GMIFGPSPRSARWPIGIAAFGLCL--LFLIKNSGSARES---AGNNRKEGVHVAAASAPF 105
Query: 309 QVRHLLQKIESTSD------NHASARQRVEWPRADLFGYIIQVESGVTGTAV*WKXXXXX 148
V +T + +ASA +DLFGYIIQVESGVTGTA
Sbjct: 106 LVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA------GLM 159
Query: 147 XXXXXXFVENSSFPFV*IPQRRIN------NLWGPIYSISRAPKKTPLPFGLHI 4
V+ + F + R+N N WGP S +P KTPLPFGL+I
Sbjct: 160 ENNFHGSVQRALFSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFGLNI 212
Score = 31.2 bits (69), Expect(2) = 1e-19
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -3
Query: 656 TTKGKARRREGDAAGEGKRFRISRFDLFFSSKTKKAED 543
T KGKARRR+ A G+ R L FSSKTKK E+
Sbjct: 5 TIKGKARRRKERAFGD-------RDFLTFSSKTKKTEN 35
Score = 78.6 bits (192), Expect = 4e-12
Identities = 72/205 (35%), Positives = 88/205 (42%), Gaps = 5/205 (2%)
Frame = -1
Query: 619 RREKENAFGYRDLICFFHRKRRRPKMAYGACYLKGTRFFDRGGWYSCRALSSFRPLAHWD 440
RR KE AFG RD + F + ++ + + KGTRFFDRGG + S A W
Sbjct: 11 RRRKERAFGDRDFLTFSSKTKKTENV--NLSFEKGTRFFDRGGMIFGPSPRS----ARWP 64
Query: 439 SCLRALPALSISNRIRNSGSARESAGNNRKE----XXXXXXXXXXXXXXXXSTTKDRIHF 272
+ A L + I+NSGSARESAGNNRKE +TTK+RIHF
Sbjct: 65 IGIAAF-GLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHF 123
Query: 271 R*PRL-CQAACGMAESGPFWIYNPSREWSYGNSRLMXXXXXXXXXXXXXXXXFLVPFRVN 95
+ AACGMA S F G + LM L RVN
Sbjct: 124 KITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLRILRSLRVN 183
Query: 94 SPAAN*QLVGPYLFHLSSPEENPPP 20
S A GP + SSP + P P
Sbjct: 184 SLARIQNFWGPSI-PSSSPAKTPLP 207
>gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gi|374277705|gb|AEZ03810.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
Length = 164
Score = 98.2 bits (243), Expect = 5e-18
Identities = 73/170 (42%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Frame = +1
Query: 316 SGRAQQLHGPLPFCCCQRFPGPSRNSLFY*K*KGQAKPEGSYPNGPAGGTRRGPGKNTNH 495
SGRAQQLHGPL CCCQRFPGPSRNSL + QAKPEG
Sbjct: 7 SGRAQQLHGPLSLCCCQRFPGPSRNSLLE---RRQAKPEG-------------------- 43
Query: 496 RGRKSVFPSDNTHRRPSSAFFVFDEKNKSNLDIRKRFPSPAASPSLRRAFPLVVGGSKPY 675
+ + P RPSS F KNKS K F P SP + G Y
Sbjct: 44 ---RQLSP------RPSS----FSMKNKSTSQSPKAFSLPGKSPPPSSSLSFSGKGYALY 90
Query: 676 LNL---AGILSLWGGFGFNMGSNMI*RVLATPCVQYQKRSLWKAAGMTKR 816
LN+ +GIL G N+GSNMI VLATPCVQY+K+ L KR
Sbjct: 91 LNVGRHSGILLF--GPRVNIGSNMIGGVLATPCVQYKKKPLGSCRDYKKR 138
>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 2-like, partial [Cucumis sativus]
Length = 472
Score = 97.1 bits (240), Expect = 1e-17
Identities = 58/128 (45%), Positives = 62/128 (48%)
Frame = -3
Query: 398 NKEFRLGPGKRWQQQKGRGPCSCCARPLSSRFGIYYKR*NPLQITTPLPGSVWNGRERTF 219
+KEFRLGPGKRWQQ+KGRGPCS P + GS
Sbjct: 8 HKEFRLGPGKRWQQEKGRGPCSAAPAPF---------------LVNGAAGS--------- 43
Query: 218 LDI*SKSRVELREQPSDGKPLSRSVQRALFSLRIPRSLSCEFPSGELTTCGALSIPSLEP 39
RALFSL IPRSLSC FPSGE TCGALSIPSL+P
Sbjct: 44 --------------------------RALFSLIIPRSLSCSFPSGEFETCGALSIPSLKP 77
Query: 38 RRKPPSPS 15
R KPP PS
Sbjct: 78 RXKPPLPS 85
>ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobroma cacao]
gi|508783907|gb|EOY31163.1| Uncharacterized protein
TCM_038148 [Theobroma cacao]
Length = 538
Score = 92.0 bits (227), Expect = 3e-16
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = -2
Query: 390 IPARPGKALATTERKGSM*LLRPPTEQQVRHLLQKIESTSDNHASARQRVEWPRADLFGY 211
+ + P + L E + +QVRHLL+K ESTSDNHASARQRVEWPRADLFGY
Sbjct: 466 VSSEPEELLVWVETTLAQDFYHNSEREQVRHLLEKRESTSDNHASARQRVEWPRADLFGY 525
Query: 210 IIQVESGVTGTAV 172
IIQVESGVTGTAV
Sbjct: 526 IIQVESGVTGTAV 538
>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
Length = 464
Score = 90.5 bits (223), Expect = 1e-15
Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Frame = -2
Query: 486 ILAGPSPRSARWPIGIAAFGLCLPFLFLIE*GIPARPGKALATTERKGSM*LLRPPTEQQ 307
++ GPSPRSARWPIGIAAFGLCL LFLI+ AR A RK + +
Sbjct: 1 MIFGPSPRSARWPIGIAAFGLCL--LFLIKNSGSARES---AGNNRKEGVHVAAASAPFL 55
Query: 306 VRHLLQKIESTSD------NHASARQRVEWPRADLFGYIIQVESGVTGTAV*WKXXXXXX 145
V +T + +ASA +DLFGYIIQVESGVTGTA
Sbjct: 56 VNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA------GLME 109
Query: 144 XXXXXFVENSSFPFV*IPQRRIN------NLWGPIYSISRAPKKTPLPFGLHI 4
V+ + F + R+N N WGP S +P KTPLPFGL+I
Sbjct: 110 NNFHGSVQRALFSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFGLNI 161
>ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabacum]
gi|56806589|dbj|BAD83490.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 105
Score = 86.3 bits (212), Expect = 2e-14
Identities = 51/82 (62%), Positives = 58/82 (70%)
Frame = +2
Query: 338 MDPFLSVVASAFPGRAGIPYSIRNRKGRQSPKAAIPMGQRAERGEGPARIPTTAVEKACS 517
MDPFLSVVASAFPGRAGI Y KG+ P+ + P + R GP TTAV+KACS
Sbjct: 1 MDPFLSVVASAFPGRAGIFYY----KGQAKPEGSYPNRKGGTR-RGPGN-HTTAVKKACS 54
Query: 518 LQITRTVGHLRPSSFSMKKTNQ 583
LQI RTVGH RPSSFSMKK ++
Sbjct: 55 LQIRRTVGHPRPSSFSMKKKSR 76
>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
gi|223525904|gb|EEF28320.1| conserved hypothetical
protein [Ricinus communis]
Length = 83
Score = 54.7 bits (130), Expect(2) = 6e-14
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -3
Query: 398 NKEFRLGPGKRWQQQKGRGPCSCCARPLSSRFG 300
NK FRL P +RWQQ KG+GPCSC RPL S++G
Sbjct: 45 NKNFRLDPRERWQQHKGKGPCSCYVRPLLSKWG 77
Score = 50.4 bits (119), Expect(2) = 6e-14
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -1
Query: 544 MAYGACYLKGTRFFDRGGWYSCRALSSFR-PLAHWDSCLRALPALSISN 401
M YGACYLKGTRFF+RGG + + S R P+ DS L+ALPALS N
Sbjct: 1 MVYGACYLKGTRFFNRGGMIAGPSPRSARWPIG--DSSLQALPALSNKN 47
>ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp. mays]
gi|40795129|gb|AAR91173.1| hypothetical protein
(mitochondrion) [Zea mays] gi|102579662|gb|ABF70942.1|
hypothetical protein (mitochondrion) [Zea mays subsp.
mays]
Length = 101
Score = 84.3 bits (207), Expect = 7e-14
Identities = 58/134 (43%), Positives = 61/134 (45%)
Frame = -3
Query: 692 MPAKFR*GLEPPTTKGKARRREGDAAGEGKRFRISRFDLFFSSKTKKAEDGLRCVLSEGN 513
MPA + TTKGKARRR G R +S DLFF K + D L G
Sbjct: 1 MPADVQIRCISLTTKGKARRRGGRV-----RKTLSEIDLFFIEKEEGRGDSS---LPSGF 52
Query: 512 TLFRPRWXXXXXXXXXXXXXXXXXXXXXXXACPFYF**NKEFRLGPGKRWQQQKGRGPCS 333
R NKEFRLGPGKRWQQ K RGPCS
Sbjct: 53 ACRRS---------------------------------NKEFRLGPGKRWQQHKERGPCS 79
Query: 332 CCARPLSSRFGIYY 291
CCARPLSSRFGIYY
Sbjct: 80 CCARPLSSRFGIYY 93
>ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, partial [Eutrema
salsugineum] gi|557103035|gb|ESQ43398.1| hypothetical
protein EUTSA_v10015951mg, partial [Eutrema salsugineum]
Length = 414
Score = 63.5 bits (153), Expect = 1e-07
Identities = 55/141 (39%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Frame = -3
Query: 758 VARTLQIMFEPMLKPNP-PHSERMPAKFR*GLEPPTTKGKARRREGDAAGEGKRFRISRF 582
+ LQIMFEPM K NP P + P + T+ KARRREGDAAG+GK F SR
Sbjct: 65 ITADLQIMFEPMFKQNPSPGWKECPPSSD---KVSTSPRKARRREGDAAGKGKGFWRSRD 121
Query: 581 DLFFSSKTKKAEDGLRCVLSEGNTLFRPRWXXXXXXXXXXXXXXXXXXXXXXXACPFYF* 402
L + A C L R A P Y
Sbjct: 122 FLSWPRMAYGA-----CYLKGARFFDR--------------------GAMIAGASPQY-- 154
Query: 401 *NKEFRLGPGKRWQQQKGRGP 339
NK+F LGPGKRWQQQK RGP
Sbjct: 155 -NKKFWLGPGKRWQQQKRRGP 174
Score = 62.8 bits (151), Expect = 2e-07
Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Frame = -1
Query: 865 VVRLLLGF-FSATQESALFLSSLQLSRGFFFGIERMA*LGPFKSCLSPC*NQT-HPIAKE 692
+ ++L G+ + +F+ L ++ GF F I + P Q P KE
Sbjct: 33 LAKILTGYEIIGARSRGIFMGILSIAVGFLFKIT-----ADLQIMFEPMFKQNPSPGWKE 87
Query: 691 CPPSSDKVWNPQPLKERLDEGREMRREKENAFGYRDLICFFHRKRRRPKMAYGACYLKGT 512
CPPSSDKV + P K R EG + K + RD + + P+MAYGACYLKG
Sbjct: 88 CPPSSDKV-STSPRKARRREGDAAGKGK-GFWRSRDFLSW-------PRMAYGACYLKGA 138
Query: 511 RFFDRG 494
RFFDRG
Sbjct: 139 RFFDRG 144
>ref|YP_588305.1| hypothetical protein ZeamMp043 [Zea mays subsp. mays]
gi|40795049|gb|AAR91093.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 140
Score = 60.8 bits (146), Expect = 8e-07
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +1
Query: 547 SAFFVFDEKNKSNLDIRKRFPSPAASPSLRRAFPLVVGGSKPYLNL---AGILSLWGGFG 717
SAFF+FDEK +++RKRFP P+ PS +F G PYLN+ +GIL
Sbjct: 30 SAFFLFDEKQ---INLRKRFPYPSP-PSSSLSFS--GKGYAPYLNVGRHSGILLFEPRV- 82
Query: 718 FNMGSNMI*RVLATPCVQYQKRSLWKAAGMTKR 816
N+GSNMI VLATPCVQY+K+ L + KR
Sbjct: 83 -NIGSNMIGGVLATPCVQYKKKPLGSSRDYKKR 114