BLASTX nr result
ID: Cocculus23_contig00019496
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00019496
(296 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 145 4e-33
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 139 5e-31
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 137 1e-30
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 137 1e-30
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 135 5e-30
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc... 135 6e-30
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 134 1e-29
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 134 1e-29
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 134 1e-29
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 134 2e-29
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 134 2e-29
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 134 2e-29
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 134 2e-29
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 133 2e-29
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 131 9e-29
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 131 1e-28
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 130 1e-28
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 130 1e-28
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera] 130 2e-28
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 130 3e-28
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 145 bits (367), Expect = 4e-33
Identities = 62/98 (63%), Positives = 78/98 (79%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+++ T Y S+GIIHR+SCPYTH+QNG AERKHRHIVE + LLA +S+P K+WDEA R
Sbjct: 636 EYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFR 695
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
T+V+L+NRLPTPVL KSP E+L+H P Y L+ FGC
Sbjct: 696 TSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGC 733
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 139 bits (349), Expect = 5e-31
Identities = 62/98 (63%), Positives = 77/98 (78%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q L T+F GI H VSCP+THQQNG AERKHRHIVE L+LLAH+S+PLKFWDEA +
Sbjct: 416 EYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLKFWDEAYQ 475
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
+ V+L+NR+PT VL SP E L+ +P+Y +LRTFGC
Sbjct: 476 SGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGC 513
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 137 bits (346), Expect = 1e-30
Identities = 60/98 (61%), Positives = 77/98 (78%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q+L ++F GI+H VSCP+THQQNG AERKHRHIVE L+LL+H+SMPLKFWDEA +
Sbjct: 581 EYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQ 640
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NR+P+ V+H SP E L+ P+Y SLR FGC
Sbjct: 641 VATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGC 678
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 137 bits (346), Expect = 1e-30
Identities = 60/98 (61%), Positives = 77/98 (78%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q+L ++F GI+H VSCP+THQQNG AERKHRHIVE L+LL+H+SMPLKFWDEA +
Sbjct: 614 EYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQ 673
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NR+P+ V+H SP E L+ P+Y SLR FGC
Sbjct: 674 AATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGC 711
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 135 bits (341), Expect = 5e-30
Identities = 60/98 (61%), Positives = 77/98 (78%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
EF++L TYF+ +GIIHR+SCP+T +QNG ERKHRHIVE LTLLA +S+PLK+W +A
Sbjct: 448 EFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFS 507
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
TAVFL+NRLPT VL +K P+E L++ P Y L+ FGC
Sbjct: 508 TAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGC 545
>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1001
Score = 135 bits (340), Expect = 6e-30
Identities = 61/98 (62%), Positives = 73/98 (74%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E++ L ++F GI HRVSCP+ HQQNG AERKHRHIVE L LLAH+SMPLKFWDEA
Sbjct: 326 EYEKLNSFFTKIGISHRVSCPHAHQQNGAAERKHRHIVEVGLALLAHASMPLKFWDEAFC 385
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
TA +L+NR P ++ +P E L+H PEY SLRTFGC
Sbjct: 386 TATYLINRTPAKTINFDTPLERLFHQKPEYASLRTFGC 423
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 134 bits (338), Expect = 1e-29
Identities = 57/98 (58%), Positives = 75/98 (76%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E++AL ++F GI+H VSCP+THQQNG AERKHRHIVE L+LL+H+ MPLKFWDEA +
Sbjct: 457 EYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSHAHMPLKFWDEAFQ 516
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NR+P+ V+ +P E +H P+Y SLR FGC
Sbjct: 517 AATYLINRVPSRVIQNTTPLEKFFHQKPDYSSLRVFGC 554
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 134 bits (338), Expect = 1e-29
Identities = 61/98 (62%), Positives = 73/98 (74%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q L T+F GI H VSCP+ HQQNG AERKHRHIVE L+LLAH+SMPLKFWDEA
Sbjct: 434 EYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFL 493
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NR PT +L+ +PFE L+H P+Y LR FGC
Sbjct: 494 AAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGC 531
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 134 bits (338), Expect = 1e-29
Identities = 61/98 (62%), Positives = 73/98 (74%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q L T+F GI H VSCP+ HQQNG AERKHRHIVE L+LLAH+SMPLKFWDEA
Sbjct: 434 EYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFL 493
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NR PT +L+ +PFE L+H P+Y LR FGC
Sbjct: 494 AAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGC 531
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 134 bits (336), Expect = 2e-29
Identities = 59/98 (60%), Positives = 76/98 (77%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
EF++L TYF+ +GIIHR+SCP+T +QNG ERKHRHIVE LTLLA +S+PLK+W +A
Sbjct: 694 EFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFS 753
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
T VFL+NRLPT VL +K P+E L++ P Y L+ FGC
Sbjct: 754 TXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGC 791
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 134 bits (336), Expect = 2e-29
Identities = 60/98 (61%), Positives = 74/98 (75%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q L ++F+ GI H+VSCP+THQQNG ERKHRHIVE L+LLAH+SMPLKFWDEA
Sbjct: 464 EYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFL 523
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NRLP V+ +P L+H P+Y SLRTFGC
Sbjct: 524 AATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGC 561
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 134 bits (336), Expect = 2e-29
Identities = 62/98 (63%), Positives = 74/98 (75%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q L ++F GI H VSCP+THQQNG AERKHRHIVE L LLA+SSMPLKFW EA
Sbjct: 585 EYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFL 644
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
+AV+L+NR P+ VLH+ SP E L H P+Y +LR FGC
Sbjct: 645 SAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGC 682
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 134 bits (336), Expect = 2e-29
Identities = 60/98 (61%), Positives = 74/98 (75%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q L ++F+ GI H+VSCP+THQQNG ERKHRHIVE L+LLAH+SMPLKFWDEA
Sbjct: 575 EYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFL 634
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NRLP V+ +P L+H P+Y SLRTFGC
Sbjct: 635 AATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGC 672
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 133 bits (335), Expect = 2e-29
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E++ L ++F GI H VSCP+THQQNG AERKHRHIVE LTLLA+SSMPLKFWDEA +
Sbjct: 587 EYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQ 646
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
AV+L+NR PT +L +P E L++ +P+Y SLR FGC
Sbjct: 647 AAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGC 684
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 131 bits (330), Expect = 9e-29
Identities = 58/98 (59%), Positives = 71/98 (72%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+Q L T+F GI H VSCPY HQQNG AERKHRH++E ALTLLAH+SMP+KFWDEA
Sbjct: 549 EYQKLNTFFAKIGISHHVSCPYAHQQNGSAERKHRHLIEVALTLLAHASMPIKFWDEAVL 608
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NR P+ V++ P E L+ P Y +LR FGC
Sbjct: 609 AAAYLINRTPSKVINFACPLEQLFKEKPNYTALRIFGC 646
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 131 bits (329), Expect = 1e-28
Identities = 60/98 (61%), Positives = 73/98 (74%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E+ L T+F GI H VSCP+THQQNG ERKHRHIVE L+LLAH+SMPLKFWDEA
Sbjct: 574 EYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFL 633
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NRLP+ V+ +P E L+ +P+Y SLRTFGC
Sbjct: 634 AATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGC 671
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 130 bits (328), Expect = 1e-28
Identities = 60/98 (61%), Positives = 70/98 (71%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E++ L F GI H VSCPY HQQNG AERKHRHIVE L+LLAH+SMPLKFWDEA
Sbjct: 502 EYEKLNAIFTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFL 561
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
TA +L+NR P+ V+ +P E L + P Y SLRTFGC
Sbjct: 562 TATYLINRTPSKVIQYSTPLERLLNQKPNYSSLRTFGC 599
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 130 bits (328), Expect = 1e-28
Identities = 59/98 (60%), Positives = 72/98 (73%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
E++ L +F GI H VSCP+THQQNG AERKHRHIVE L+LLAH+SMPLKFWDEA
Sbjct: 578 EYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFI 637
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
A +L+NR P+ V+ ++P E L+H P Y SLR FGC
Sbjct: 638 AATYLINRTPSKVIQYETPLEHLFHQKPSYTSLRVFGC 675
>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
Length = 846
Score = 130 bits (327), Expect = 2e-28
Identities = 60/98 (61%), Positives = 73/98 (74%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
EF+A +Y +GI+HRVSCP+T QQNG AERKHR IVE LTLL +S+PLKFWDE+ R
Sbjct: 235 EFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFR 294
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
T V+L NRLPT VLH K P E+L+ P+Y L+ FGC
Sbjct: 295 TVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGC 332
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 130 bits (326), Expect = 3e-28
Identities = 59/98 (60%), Positives = 73/98 (74%)
Frame = +2
Query: 2 EFQALTTYFQSSGIIHRVSCPYTHQQNGFAERKHRHIVEKALTLLAHSSMPLKFWDEAAR 181
EF+A +Y +GI+HRVSCP+T QQNG AERKHR IVE LTLL +S+PLKFWDE+ R
Sbjct: 653 EFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFR 712
Query: 182 TAVFLLNRLPTPVLHEKSPFEMLYHHSPEYPSLRTFGC 295
T V+L NRLPT +LH K P E+L+ P+Y L+ FGC
Sbjct: 713 TVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGC 750