BLASTX nr result

ID: Cocculus23_contig00019282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00019282
         (564 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99338.1| gag [Silene latifolia]                                  55   1e-05

>gb|AAY99338.1| gag [Silene latifolia]
          Length = 209

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 31/85 (36%), Positives = 49/85 (57%)
 Frame = -2

Query: 275 KPDIVLCRIFNLTLTGPALKLYEKLTLGSISLFHQRYNKFISRFMSSRDDKMRSCHLLTI 96
           +PD V CR+F  TL G A   Y+ L  GS+  +    + FI+++  ++   + +  LLTI
Sbjct: 6   QPDEVWCRVFPTTLHGMAQSWYKGLPNGSVYCYADLRDNFIAQYACNKRRAVETSDLLTI 65

Query: 95  KQEKGESLKKYLMCFNAKAV*IEDL 21
           +Q   ESL+ Y+  F+AKA  I +L
Sbjct: 66  RQGDDESLRSYVKRFDAKAQQIREL 90


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