BLASTX nr result

ID: Cocculus23_contig00019062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00019062
         (546 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA92742.2| POT family protein [Oryza sativa Japonica Group]        45   4e-06

>gb|ABA92742.2| POT family protein [Oryza sativa Japonica Group]
          Length = 569

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 24/71 (33%), Positives = 36/71 (50%)
 Frame = +3

Query: 51  PPFTCSRFLDKASILDGKNNGG*CLCTVTQVEVMKXXXXXXXXXXXXMVGYVPIRFVVTL 230
           PP  C   L+KA++  G + G   LC+V QVE  K            ++GY+P+  ++T 
Sbjct: 274 PPMWC---LEKAAVRTGNDAGAWSLCSVNQVEETKILLRMAPIFAAAVLGYIPMPLILTF 330

Query: 231 TVQQAAPSTPK 263
           TVQQ +    K
Sbjct: 331 TVQQGSTMNTK 341



 Score = 30.8 bits (68), Expect(2) = 4e-06
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = +2

Query: 242 GSTINAKVGMFESPXXXXXXXXXXXXXXXXXAHRRLFVLQVPRIT*CLTRIMHLQHVKLG 421
           GST+N K+G                       + R+ V  + R+T  +  + HLQ + +G
Sbjct: 335 GSTMNTKLGSVHISPATLFLIPIIFQLVILILYDRVIVPPLRRLTGYVGGVTHLQRIGVG 394

Query: 422 FLSALLAT 445
           F++ ++AT
Sbjct: 395 FIATIMAT 402


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