BLASTX nr result
ID: Cocculus23_contig00018070
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00018070
(252 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316152.1| pentatricopeptide repeat-containing family p... 148 9e-34
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi... 146 3e-33
ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33
ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,... 145 4e-33
ref|XP_007213281.1| hypothetical protein PRUPE_ppa027212mg, part... 143 3e-32
ref|XP_003555011.2| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
ref|XP_007151569.1| hypothetical protein PHAVU_004G057900g [Phas... 141 8e-32
ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutr... 141 1e-31
ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containi... 141 1e-31
ref|XP_007011289.1| Pentatricopeptide repeat (PPR) superfamily p... 140 1e-31
emb|CBI22115.3| unnamed protein product [Vitis vinifera] 140 2e-31
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citr... 139 4e-31
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g... 139 4e-31
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar... 138 9e-31
ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Caps... 137 2e-30
gb|EXB51258.1| hypothetical protein L484_019251 [Morus notabilis] 136 3e-30
ref|XP_004504664.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
gb|EYU27583.1| hypothetical protein MIMGU_mgv1a027117mg, partial... 130 2e-28
>ref|XP_002316152.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865192|gb|EEF02323.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 148 bits (373), Expect = 9e-34
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S EWTEDI YLDE+G VI+SGKGIRSVEPGVDDHVM+GGLKKP NA+AVAKIVE+VKRW
Sbjct: 44 SGEWTEDIEYLDESGSVIYSGKGIRSVEPGVDDHVMIGGLKKPILNASAVAKIVEVVKRW 103
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
KWGPE+ET LDKL FVPNM+HV
Sbjct: 104 KWGPELETQLDKLQFVPNMTHV 125
>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
gi|449490234|ref|XP_004158545.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
Length = 823
Score = 146 bits (369), Expect = 3e-33
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = +2
Query: 8 EWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKW 187
EWTEDI YLDE+G VIFSGKG+RSVEPGVDDHVMVGGLKKPF NA+AVAKIVE+V+RWKW
Sbjct: 83 EWTEDIEYLDESGSVIFSGKGVRSVEPGVDDHVMVGGLKKPFLNASAVAKIVEVVRRWKW 142
Query: 188 GPEMETHLDKLHFVPNMSHV 247
GPE+E+ L+KL FVPNM+H+
Sbjct: 143 GPELESQLEKLQFVPNMTHI 162
>ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Solanum tuberosum]
Length = 794
Score = 145 bits (367), Expect = 4e-33
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S EWTED+ YLDE+G VI+SGKGIRSVEPG+DDHVMVGGLKKP NA+AVAK+VEIVKRW
Sbjct: 51 SDEWTEDVEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPILNASAVAKLVEIVKRW 110
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
+WGPEMET LDKL F+PNM+H+
Sbjct: 111 RWGPEMETQLDKLQFIPNMTHI 132
>ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Solanum lycopersicum]
Length = 794
Score = 145 bits (367), Expect = 4e-33
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S EWTED+ YLDE+G VI+SGKGIRSVEPG+DDHVMVGGLKKP NA+AVAK+VEIVKRW
Sbjct: 51 SDEWTEDVEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPILNASAVAKLVEIVKRW 110
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
+WGPEMET LDKL F+PNM+H+
Sbjct: 111 RWGPEMETQLDKLQFIPNMTHI 132
>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 841
Score = 145 bits (367), Expect = 4e-33
Identities = 67/82 (81%), Positives = 74/82 (90%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S +WTEDI YLDE+G VI+SGKGIRSVEPG+DDHVMVGGLKKPF N AVAKIVEIVKRW
Sbjct: 104 SAKWTEDIEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPFLNVAAVAKIVEIVKRW 163
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
KWGPE+ET LDKL FVP+M+HV
Sbjct: 164 KWGPELETQLDKLQFVPSMTHV 185
>ref|XP_007213281.1| hypothetical protein PRUPE_ppa027212mg, partial [Prunus persica]
gi|462409146|gb|EMJ14480.1| hypothetical protein
PRUPE_ppa027212mg, partial [Prunus persica]
Length = 747
Score = 143 bits (360), Expect = 3e-32
Identities = 63/80 (78%), Positives = 74/80 (92%)
Frame = +2
Query: 8 EWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKW 187
EWTE+I YLDE+G VI++GKGIRSVEPG+DDHVMVG LKKPF NA+A+AKIVE+VKRWKW
Sbjct: 8 EWTEEIEYLDESGSVIYTGKGIRSVEPGLDDHVMVGDLKKPFLNASAIAKIVEVVKRWKW 67
Query: 188 GPEMETHLDKLHFVPNMSHV 247
GPE+ET LDKL FVPNM+H+
Sbjct: 68 GPELETQLDKLQFVPNMTHI 87
>ref|XP_003555011.2| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 818
Score = 142 bits (359), Expect = 4e-32
Identities = 63/80 (78%), Positives = 73/80 (91%)
Frame = +2
Query: 8 EWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKW 187
EWTE+I YLDE+GGVI+ GKG+RSVEPGVDDHVMVG +KKPF NA AVAKIVE+VKRWKW
Sbjct: 79 EWTEEIEYLDESGGVIYKGKGVRSVEPGVDDHVMVGEVKKPFVNALAVAKIVEVVKRWKW 138
Query: 188 GPEMETHLDKLHFVPNMSHV 247
GPE++T LDKL FVPNM+H+
Sbjct: 139 GPELDTQLDKLQFVPNMTHI 158
>ref|XP_007151569.1| hypothetical protein PHAVU_004G057900g [Phaseolus vulgaris]
gi|561024878|gb|ESW23563.1| hypothetical protein
PHAVU_004G057900g [Phaseolus vulgaris]
Length = 755
Score = 141 bits (356), Expect = 8e-32
Identities = 63/82 (76%), Positives = 74/82 (90%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S +WTE+I YLDE+GGVI+ GKG+RSVEPG+DDHVMVG +KKPF NA AVAKIVE+VKRW
Sbjct: 14 SGKWTEEIEYLDESGGVIYKGKGVRSVEPGLDDHVMVGEVKKPFVNALAVAKIVEVVKRW 73
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
KWGPE+ET LDKL FVPNM+H+
Sbjct: 74 KWGPELETQLDKLQFVPNMTHI 95
>ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutrema salsugineum]
gi|557086318|gb|ESQ27170.1| hypothetical protein
EUTSA_v10018121mg [Eutrema salsugineum]
Length = 836
Score = 141 bits (355), Expect = 1e-31
Identities = 63/79 (79%), Positives = 72/79 (91%)
Frame = +2
Query: 11 WTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKWG 190
WTE++ YLDE+G VI SGKGIRSVEPG+DDHVMVGGLKKPF NA+AVAKIVE+V+RWKWG
Sbjct: 97 WTEEVEYLDESGSVIHSGKGIRSVEPGLDDHVMVGGLKKPFMNASAVAKIVEVVQRWKWG 156
Query: 191 PEMETHLDKLHFVPNMSHV 247
PE+ET LDKL FVPNM H+
Sbjct: 157 PELETQLDKLQFVPNMVHI 175
>ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 844
Score = 141 bits (355), Expect = 1e-31
Identities = 63/82 (76%), Positives = 73/82 (89%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S EWTE+I YLDE+G VI++GKGIRSVEPG+DDHVMVGGLKKP NA+ +AKIVE+VKRW
Sbjct: 102 SDEWTEEIEYLDESGSVIYTGKGIRSVEPGLDDHVMVGGLKKPLLNASVIAKIVEVVKRW 161
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
KWGPE+ET LDKL FVPNM H+
Sbjct: 162 KWGPELETQLDKLQFVPNMIHI 183
>ref|XP_007011289.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508728202|gb|EOY20099.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 820
Score = 140 bits (354), Expect = 1e-31
Identities = 65/82 (79%), Positives = 73/82 (89%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S EWTEDI YLDE+G VI+SGKGIRSVEPG+DDHVMVGGLKKP NA+AVAKIVE+VKRW
Sbjct: 78 SREWTEDIEYLDESGTVIYSGKGIRSVEPGLDDHVMVGGLKKPIMNASAVAKIVEVVKRW 137
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
KWGPE+E+ LDKL F+P M HV
Sbjct: 138 KWGPELESQLDKLQFMPKMIHV 159
>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 140 bits (353), Expect = 2e-31
Identities = 64/83 (77%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 SVEWT-EDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKR 178
S +W ED+ YLDE+G VIF+GKG+RSV+PG+DDHVMVGGLKKPF N +AVAKIVEIV R
Sbjct: 55 SSDWNQEDVEYLDESGSVIFTGKGVRSVDPGLDDHVMVGGLKKPFLNVSAVAKIVEIVNR 114
Query: 179 WKWGPEMETHLDKLHFVPNMSHV 247
W+WGPE+ET LDKLHFVPNMSHV
Sbjct: 115 WRWGPELETQLDKLHFVPNMSHV 137
>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 140 bits (353), Expect = 2e-31
Identities = 64/83 (77%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 SVEWT-EDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKR 178
S +W ED+ YLDE+G VIF+GKG+RSV+PG+DDHVMVGGLKKPF N +AVAKIVEIV R
Sbjct: 97 SSDWNQEDVEYLDESGSVIFTGKGVRSVDPGLDDHVMVGGLKKPFLNVSAVAKIVEIVNR 156
Query: 179 WKWGPEMETHLDKLHFVPNMSHV 247
W+WGPE+ET LDKLHFVPNMSHV
Sbjct: 157 WRWGPELETQLDKLHFVPNMSHV 179
>ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citrus clementina]
gi|568881878|ref|XP_006493776.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Citrus sinensis]
gi|557524134|gb|ESR35501.1| hypothetical protein
CICLE_v10004323mg [Citrus clementina]
Length = 827
Score = 139 bits (350), Expect = 4e-31
Identities = 62/80 (77%), Positives = 71/80 (88%)
Frame = +2
Query: 8 EWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKW 187
EWTE+I YLDE+G VI++GKGIRSVEPG DDHVMVGG+KKPF NA+AVAKIVE+V RWKW
Sbjct: 88 EWTEEIEYLDESGSVIYTGKGIRSVEPGFDDHVMVGGIKKPFLNASAVAKIVEVVNRWKW 147
Query: 188 GPEMETHLDKLHFVPNMSHV 247
GPE+ET LDKL FVP M H+
Sbjct: 148 GPELETQLDKLQFVPKMVHI 167
>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
subsp. lyrata]
Length = 832
Score = 139 bits (350), Expect = 4e-31
Identities = 61/79 (77%), Positives = 72/79 (91%)
Frame = +2
Query: 11 WTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKWG 190
WTE++ YLDE+G V+ SGKGIRSVEPG+DDHVMVGGLKKP+ NA+AVAKIVE+V+RWKWG
Sbjct: 93 WTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNASAVAKIVEVVQRWKWG 152
Query: 191 PEMETHLDKLHFVPNMSHV 247
PE+ET LDKL FVPNM H+
Sbjct: 153 PELETQLDKLQFVPNMVHI 171
>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 138 bits (347), Expect = 9e-31
Identities = 60/79 (75%), Positives = 72/79 (91%)
Frame = +2
Query: 11 WTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKWG 190
WTE++ YLDE+G V+ SGKGIRSVEPG+DDHVMVGGLKKP+ NA++VAKIVE+V+RWKWG
Sbjct: 97 WTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNASSVAKIVEVVQRWKWG 156
Query: 191 PEMETHLDKLHFVPNMSHV 247
PE+ET LDKL FVPNM H+
Sbjct: 157 PELETQLDKLQFVPNMVHI 175
>ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Capsella rubella]
gi|482569125|gb|EOA33313.1| hypothetical protein
CARUB_v10021690mg [Capsella rubella]
Length = 836
Score = 137 bits (345), Expect = 2e-30
Identities = 60/79 (75%), Positives = 71/79 (89%)
Frame = +2
Query: 11 WTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKWG 190
WTE++ YLDE+G V+ SGKGIRSVEPG+DDHVMVGGLKKP+ NA+AVAKIVE+V+RWKWG
Sbjct: 97 WTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNASAVAKIVEVVQRWKWG 156
Query: 191 PEMETHLDKLHFVPNMSHV 247
PE+E LDKL FVPNM H+
Sbjct: 157 PELENQLDKLQFVPNMVHI 175
>gb|EXB51258.1| hypothetical protein L484_019251 [Morus notabilis]
Length = 834
Score = 136 bits (342), Expect = 3e-30
Identities = 63/83 (75%), Positives = 72/83 (86%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 SVEWTE-DIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKR 178
S EWTE DI YLDE G VI++GKG+RSVEPGVDDH+MVGGLKKP N +AVAKIVE+V R
Sbjct: 91 SREWTEEDIEYLDELGSVIYTGKGVRSVEPGVDDHIMVGGLKKPILNPSAVAKIVEVVNR 150
Query: 179 WKWGPEMETHLDKLHFVPNMSHV 247
WKWGPE++T LDKL FVPNM+HV
Sbjct: 151 WKWGPELDTQLDKLQFVPNMTHV 173
>ref|XP_004504664.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cicer arietinum]
Length = 824
Score = 133 bits (335), Expect = 2e-29
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +2
Query: 2 SVEWTEDIVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRW 181
S EWTE+I YLDE+G VI+ GKG+RSV PGVDDHVMVG +KKPF NA A AKIV++V RW
Sbjct: 82 SKEWTEEIEYLDESGSVIYKGKGVRSVMPGVDDHVMVGEVKKPFLNALAGAKIVDVVMRW 141
Query: 182 KWGPEMETHLDKLHFVPNMSHV 247
KWGPE+ET LDKL FVPNM+H+
Sbjct: 142 KWGPELETQLDKLQFVPNMTHI 163
>gb|EYU27583.1| hypothetical protein MIMGU_mgv1a027117mg, partial [Mimulus
guttatus]
Length = 736
Score = 130 bits (326), Expect = 2e-28
Identities = 58/75 (77%), Positives = 67/75 (89%)
Frame = +2
Query: 23 IVYLDETGGVIFSGKGIRSVEPGVDDHVMVGGLKKPFSNATAVAKIVEIVKRWKWGPEME 202
I YLDE+G VI+SGKGIRSVEPG+DDHVMVGGL+KP N +AVAKIVE+VKRWKWGP+ME
Sbjct: 1 IDYLDESGSVIYSGKGIRSVEPGIDDHVMVGGLRKPILNISAVAKIVEVVKRWKWGPDME 60
Query: 203 THLDKLHFVPNMSHV 247
T LDKL F PNM+H+
Sbjct: 61 TQLDKLQFTPNMTHI 75