BLASTX nr result

ID: Cocculus23_contig00017423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00017423
         (860 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307948.1| hypothetical protein POPTR_0006s03000g [Popu...    63   2e-07
ref|XP_004249328.1| PREDICTED: uncharacterized protein LOC101250...    58   5e-06

>ref|XP_002307948.1| hypothetical protein POPTR_0006s03000g [Populus trichocarpa]
           gi|222853924|gb|EEE91471.1| hypothetical protein
           POPTR_0006s03000g [Populus trichocarpa]
          Length = 150

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 32/60 (53%), Positives = 38/60 (63%)
 Frame = -1

Query: 647 TCRKSKRRKNCPAALQKLEESEPLIRGFTFSFDTTIKSGRTPESTPKFGSFNSVGESAPR 468
           T R+SKRRK CP AL K+EE  P    F+F+FDT    G + E TPKFGSFN V  +  R
Sbjct: 38  TIRESKRRKKCPTALDKIEELAPSNPNFSFTFDTQF-GGNSQEPTPKFGSFNLVASTQER 96


>ref|XP_004249328.1| PREDICTED: uncharacterized protein LOC101250353 [Solanum
           lycopersicum]
          Length = 150

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = -1

Query: 641 RKSKRRKNCPAALQKLEESEPLIR-GFTFSFDTTIKSGRTPESTPKFGSFNSV 486
           R++KRRKNCP+AL K +        GF+FSFD+      TPE TPKFGSFN V
Sbjct: 50  RQAKRRKNCPSALDKFDSVNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRV 102


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