BLASTX nr result
ID: Cocculus23_contig00017333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00017333
(2787 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s... 333 3e-88
emb|CBI22720.3| unnamed protein product [Vitis vinifera] 333 3e-88
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot... 305 8e-80
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr... 304 1e-79
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s... 292 7e-76
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s... 276 4e-71
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s... 274 1e-70
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor... 268 1e-68
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas... 266 3e-68
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s... 263 3e-67
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s... 261 2e-66
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun... 256 5e-65
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s... 253 3e-64
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s... 252 8e-64
ref|XP_004489522.1| PREDICTED: DNA-directed RNA polymerase III s... 250 3e-63
ref|XP_004489521.1| PREDICTED: DNA-directed RNA polymerase III s... 250 3e-63
emb|CBI26210.3| unnamed protein product [Vitis vinifera] 249 4e-63
ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3... 244 1e-61
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s... 238 9e-60
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei... 238 1e-59
>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
vinifera]
Length = 511
Score = 333 bits (854), Expect = 3e-88
Identities = 166/249 (66%), Positives = 204/249 (81%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC NV++RLDDGA+ VL+AMLEATR EK + TENSVPL+MD IFE VMKS+ GR+MTL
Sbjct: 261 ACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTL 320
Query: 753 DHVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSK 574
+ VR +L QLGC P +R E +SVD+KNIIE+AQNDEVESI LKRYG+DAYR+FRLLSK
Sbjct: 321 ERVRGSLIQLGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSK 380
Query: 573 TGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLK 394
+ L+ETDK+SD FVE+K+ KILY LWKD YL MEK+ HGS QSQFLLWKV K L
Sbjct: 381 SCRLLETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLW 440
Query: 393 EHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMK 214
H+L+EM H+A+NL R+AYEL +E EI+QLP+ K++GA G R++R+RKV+ILL+SSLMK
Sbjct: 441 GHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMK 500
Query: 213 LDDAIMLFS 187
LDDAIMLF+
Sbjct: 501 LDDAIMLFN 509
>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
Length = 524
Score = 333 bits (854), Expect = 3e-88
Identities = 166/249 (66%), Positives = 204/249 (81%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC NV++RLDDGA+ VL+AMLEATR EK + TENSVPL+MD IFE VMKS+ GR+MTL
Sbjct: 274 ACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTL 333
Query: 753 DHVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSK 574
+ VR +L QLGC P +R E +SVD+KNIIE+AQNDEVESI LKRYG+DAYR+FRLLSK
Sbjct: 334 ERVRGSLIQLGCAPCVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSK 393
Query: 573 TGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLK 394
+ L+ETDK+SD FVE+K+ KILY LWKD YL MEK+ HGS QSQFLLWKV K L
Sbjct: 394 SCRLLETDKISDTTFVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLW 453
Query: 393 EHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMK 214
H+L+EM H+A+NL R+AYEL +E EI+QLP+ K++GA G R++R+RKV+ILL+SSLMK
Sbjct: 454 GHVLNEMYHSALNLSLRVAYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMK 513
Query: 213 LDDAIMLFS 187
LDDAIMLF+
Sbjct: 514 LDDAIMLFN 522
>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
[Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
polymerase III subunit RPC82 family protein, putative
isoform 1 [Theobroma cacao]
Length = 523
Score = 305 bits (781), Expect = 8e-80
Identities = 155/244 (63%), Positives = 194/244 (79%)
Frame = -1
Query: 921 NVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLDHVR 742
NVR+ LDDGA V++AMLEATR EK + TENSVPL++++I+EEV+KS+EGR +T D VR
Sbjct: 284 NVRACLDDGAVIVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVR 343
Query: 741 AALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKTGHL 562
A+L QL C P ++ E +S+D K IIE+AQNDEVESI+LKRYG+DAYRMFRLLS T L
Sbjct: 344 ASLVQLSCPPFVKAVNESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARL 403
Query: 561 VETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLKEHIL 382
+ETDK++D AFVE+K+ KILY LWKD YLHMEK+ G+ QSQFLLWKVNK+ L EH+L
Sbjct: 404 LETDKIADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVL 463
Query: 381 DEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMKLDDA 202
DEM HAA+NL R+A+EL +E E+L LP Q KR +R+RKV++LL+SS MKLDDA
Sbjct: 464 DEMFHAALNLSLRVAHELEQEKELLNLP-------QDKRVNRLRKVRLLLESSQMKLDDA 516
Query: 201 IMLF 190
IMLF
Sbjct: 517 IMLF 520
>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC3-like isoform X1 [Citrus
sinensis] gi|557523806|gb|ESR35173.1| hypothetical
protein CICLE_v10004721mg [Citrus clementina]
Length = 527
Score = 304 bits (779), Expect = 1e-79
Identities = 151/247 (61%), Positives = 196/247 (79%)
Frame = -1
Query: 930 CALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLD 751
C +VR+ LDDGA+ VL+AML+AT EK + T+NSVPL++ +I+EEV+KS+ GR MTLD
Sbjct: 278 CIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLD 337
Query: 750 HVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKT 571
HVRA+L QLG + + +S+D + IIEIAQN+EVES++ KRYG+DAYR+FRLLSK+
Sbjct: 338 HVRASLVQLGELSFVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKS 397
Query: 570 GHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLKE 391
G L+ETDK+SD FVE+K+A KILY LWKDGYL MEK++ G+ QSQFLLWKVN+ L +
Sbjct: 398 GRLLETDKISDTTFVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWK 457
Query: 390 HILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMKL 211
H+LDEM HAA+NL R++YEL +E E+L LP K+ G RY+RIRKV+ILL+SS MKL
Sbjct: 458 HVLDEMFHAALNLSLRVSYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKL 517
Query: 210 DDAIMLF 190
DDAI+LF
Sbjct: 518 DDAILLF 524
>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X2 [Citrus sinensis]
Length = 512
Score = 292 bits (747), Expect = 7e-76
Identities = 149/247 (60%), Positives = 190/247 (76%)
Frame = -1
Query: 930 CALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLD 751
C +VR+ LDDGA+ VL+AML+AT EK + T+NSVPL++ +I+EEV+KS+ GR MTLD
Sbjct: 278 CIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLD 337
Query: 750 HVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKT 571
HVRA+L QL D + IIEIAQN+EVES++ KRYG+DAYR+FRLLSK+
Sbjct: 338 HVRASLVQL---------------DFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKS 382
Query: 570 GHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLKE 391
G L+ETDK+SD FVE+K+A KILY LWKDGYL MEK++ G+ QSQFLLWKVN+ L +
Sbjct: 383 GRLLETDKISDTTFVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWK 442
Query: 390 HILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMKL 211
H+LDEM HAA+NL R++YEL +E E+L LP K+ G RY+RIRKV+ILL+SS MKL
Sbjct: 443 HVLDEMFHAALNLSLRVSYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKL 502
Query: 210 DDAIMLF 190
DDAI+LF
Sbjct: 503 DDAILLF 509
>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
tuberosum]
Length = 525
Score = 276 bits (706), Expect = 4e-71
Identities = 137/248 (55%), Positives = 189/248 (76%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC NV+ R+++ A+ VL A LE +R +E + +NSVP +++AI++EV+K + G M L
Sbjct: 275 ACVANVKVRVNNDAAVVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDL 334
Query: 753 DHVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSK 574
+ +RA+L LGC + E +E +SVD+KNIIE A+ +EVESI+LKRYG++AYRMFRLLSK
Sbjct: 335 ERIRASLDDLGCEAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSK 394
Query: 573 TGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLK 394
LVETDK+SD FVE+K+A+KIL+ LWKD YL M+K+I+ + QS+F+LWK+NK L
Sbjct: 395 ADRLVETDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLW 454
Query: 393 EHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMK 214
EHILDEM HAA+NL R+ +E +E EILQ+PK K +G G +Y R+RKV I+L+SSLM
Sbjct: 455 EHILDEMYHAALNLRLRITHEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMN 514
Query: 213 LDDAIMLF 190
LDD++MLF
Sbjct: 515 LDDSLMLF 522
>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
lycopersicum]
Length = 525
Score = 274 bits (701), Expect = 1e-70
Identities = 137/248 (55%), Positives = 187/248 (75%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC NV+ R+++ A+ VL A LE +R +E + +NSVP +++AI++EV+K + G M L
Sbjct: 275 ACVANVKVRVNNDAAIVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDL 334
Query: 753 DHVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSK 574
+ +RA+L LGC + E +E +SVD+KNIIE A+ +EVESI+LKRYG++AYRMFRLLSK
Sbjct: 335 ERIRASLDDLGCEAPLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSK 394
Query: 573 TGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLK 394
LVETDK+SD FVE+K+A+KIL+ LWKD YL M+K+I+ QS+F+LWK+NK L
Sbjct: 395 ADRLVETDKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLW 454
Query: 393 EHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMK 214
EHILDEM HAA+NL R +E +E EILQ+PK K +G G +Y R+RKV I+L+SSLM
Sbjct: 455 EHILDEMYHAALNLRLRTTHEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMN 514
Query: 213 LDDAIMLF 190
LDD++MLF
Sbjct: 515 LDDSLMLF 522
>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
Length = 564
Score = 268 bits (684), Expect = 1e-68
Identities = 151/312 (48%), Positives = 193/312 (61%), Gaps = 44/312 (14%)
Frame = -1
Query: 987 IFFW*MIHHTYEYYFAL*ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTM 808
+ W + Y AC NVR+RLD GA+TVL AML+ATR EK + TENSV L+M
Sbjct: 254 VILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAMLDATRSAEKKVKTENSVSLSM 313
Query: 807 DAIFEEVMKSKEGRTMTLDHVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESI 628
D IFEEVMKS+ GR++TLD VRA+L QLGC S ++ +S+D+K IIE+AQ +EVESI
Sbjct: 314 DTIFEEVMKSEAGRSLTLDRVRASLVQLGCSSS--GTDDTYSIDLKQIIELAQKEEVESI 371
Query: 627 MLKRYGKDAYRMFRLLSKTGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHME----- 463
+L+RYG+DAYRMFRLLSK G L ETDK++DM FVE+KEA KIL LWKD YLHME
Sbjct: 372 VLRRYGRDAYRMFRLLSKAGLLQETDKIADMTFVEKKEAPKILGKLWKDEYLHMEVEYFN 431
Query: 462 ---KIISHGSM------------------------------------QSQFLLWKVNKHF 400
K +M + F LWKVNK
Sbjct: 432 LLIKFTLSSNMAICDVVDKPRLTLSGMSDLVLMDQNKEIVNKFVVDRNTTFYLWKVNKPI 491
Query: 399 LKEHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSL 220
L +H+LDEM HAA+NL R+ +EL ++ E+L +P K+ G K + R++ K L+SSL
Sbjct: 492 LWQHVLDEMYHAALNLSLRVIHELDQKKELLTIPPEKRTGPLEKEFKRLKNAKFFLESSL 551
Query: 219 MKLDDAIMLFSY 184
MKLDDA+MLF +
Sbjct: 552 MKLDDALMLFRH 563
>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
gi|561016615|gb|ESW15419.1| hypothetical protein
PHAVU_007G071300g [Phaseolus vulgaris]
Length = 517
Score = 266 bits (681), Expect = 3e-68
Identities = 138/246 (56%), Positives = 184/246 (74%), Gaps = 2/246 (0%)
Frame = -1
Query: 921 NVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLDHVR 742
N+R++ DDG +TVL+A+LEAT+ EK + ENSVPL++D I EVMK+ GRTMT+D +R
Sbjct: 270 NIRTQHDDGTATVLSAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIR 329
Query: 741 AALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKTGHL 562
A+L+QLGC + + Y S+D+K IIE AQN+EVESI+LKRYG+DAYRMFRLLSK
Sbjct: 330 ASLSQLGCSQRMIVDDAY-SIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCF 388
Query: 561 VETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLKEHIL 382
+TD+++ VE+KEA K+LY LWKD YL+MEK+I+ G Q+ L+WKVNK + EH+L
Sbjct: 389 HDTDQIAASTLVEKKEAPKLLYRLWKDNYLYMEKVIATGVKQTTILMWKVNKPLVWEHVL 448
Query: 381 DEMCHAAVNLMQRMAYELGKEHEILQLPKS--KKIGAQGKRYDRIRKVKILLDSSLMKLD 208
DEM HAA+NL RMA+E K+ E+L +PK K+ G K+Y R+ V +LL SSLMKLD
Sbjct: 449 DEMYHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLD 508
Query: 207 DAIMLF 190
+A+MLF
Sbjct: 509 EALMLF 514
>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
max]
Length = 518
Score = 263 bits (672), Expect = 3e-67
Identities = 138/247 (55%), Positives = 186/247 (75%), Gaps = 3/247 (1%)
Frame = -1
Query: 921 NVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLDHVR 742
NVR++ DDG +TVL+A+LEATR +K + TENSVPL++D I EVMK+ GRTMT+D +R
Sbjct: 270 NVRTQHDDGTATVLSAVLEATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIR 329
Query: 741 AALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKTGHL 562
A+L QLGC PS+ EE +S+D+K IIE A+N+EVESI+LKRYG D YR+FRLL+K
Sbjct: 330 ASLVQLGCSPSMIL-EESYSIDLKKIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCF 388
Query: 561 VETDKVSDMAFVERKEALKILYNLWKDGYLHMEKI-ISHGSMQSQFLLWKVNKHFLKEHI 385
+TD+++ VE+KEA K+LY LWKD YL+MEK+ + G+ Q+ L+WKVNK L E++
Sbjct: 389 HDTDQIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATVGAKQTTILMWKVNKPLLWEYV 448
Query: 384 LDEMCHAAVNLMQRMAYELGKEHEILQLPKSKK--IGAQGKRYDRIRKVKILLDSSLMKL 211
LDEM HAA+NL RMA+E K+ E+L++PK K+ G K+Y ++ V +LL SSLMKL
Sbjct: 449 LDEMYHAALNLSLRMAFEQEKDEELLKVPKDKRQGPGPLQKKYKKLLNVWLLLGSSLMKL 508
Query: 210 DDAIMLF 190
DDA+MLF
Sbjct: 509 DDALMLF 515
>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
max]
Length = 518
Score = 261 bits (666), Expect = 2e-66
Identities = 136/247 (55%), Positives = 185/247 (74%), Gaps = 3/247 (1%)
Frame = -1
Query: 921 NVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLDHVR 742
NVR++ DDG +TVL+A+LEAT EK + +NSVPL++D I EVMK+ GRTMT+D +R
Sbjct: 270 NVRTQHDDGTATVLSAVLEATGSVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIR 329
Query: 741 AALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKTGHL 562
A+L QLGC PS+ EE + +D+K IIE A+N+EVESI+LKRYG+DAYRMFRLL+K
Sbjct: 330 ASLVQLGCSPSMIL-EESYCIDLKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCF 388
Query: 561 VETDKVSDMAFVERKEALKILYNLWKDGYLHMEKI-ISHGSMQSQFLLWKVNKHFLKEHI 385
+TD+++ VE+KEA K+LY LWKD YL+MEK+ + G+ Q L+WKVNK L E++
Sbjct: 389 HDTDQIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATAGAKQITILMWKVNKPLLWEYV 448
Query: 384 LDEMCHAAVNLMQRMAYELGKEHEILQLPKSK--KIGAQGKRYDRIRKVKILLDSSLMKL 211
LDEM HAA+NL RMA+E K+ E+L++PK K + G K+Y R+ V++L+ SSL+KL
Sbjct: 449 LDEMYHAALNLSLRMAFEQEKDEELLKVPKDKLREPGPLQKKYKRLLNVRLLMGSSLLKL 508
Query: 210 DDAIMLF 190
DDA+MLF
Sbjct: 509 DDALMLF 515
>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
gi|462415465|gb|EMJ20202.1| hypothetical protein
PRUPE_ppa004195mg [Prunus persica]
Length = 524
Score = 256 bits (653), Expect = 5e-65
Identities = 134/254 (52%), Positives = 183/254 (72%), Gaps = 6/254 (2%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC NVR+RLDD A+ VL AML+ATR EK + TENSVPL+++ I+EEV+ S+ GR++T+
Sbjct: 269 ACVENVRARLDDEAAVVLRAMLKATRTAEKKVKTENSVPLSLNTIYEEVINSEAGRSLTM 328
Query: 753 DHVRAALTQLGCHPSIR---EGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRL 583
VR +L+ L C S + +E +S D+K I+E+AQ+DEVE I+LKRYGKDAY MFR+
Sbjct: 329 GRVRDSLSGL-CDSSQERDVDEDESYSADLKKILELAQDDEVELIVLKRYGKDAYTMFRI 387
Query: 582 LSKTGHLVETDKVSDMA---FVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKV 412
LS G +ETDK+SDM+ VE+ E KILYNLWKD YLHME+++ G+ QSQFL+W+V
Sbjct: 388 LSLAGRPIETDKISDMSQLSLVEKNETPKILYNLWKDDYLHMERLVVTGARQSQFLVWRV 447
Query: 411 NKHFLKEHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILL 232
+K + +H+LDEM H A+NL R+A E + EI LP K +G K++ R V ++L
Sbjct: 448 DKPIIWKHVLDEMFHTALNLSLRLACEEERFKEITDLPAHKLLGEMAKQWQLYRNVILVL 507
Query: 231 DSSLMKLDDAIMLF 190
+SL+KLDDA+MLF
Sbjct: 508 QASLLKLDDALMLF 521
>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
sativus]
Length = 518
Score = 253 bits (646), Expect = 3e-64
Identities = 137/250 (54%), Positives = 180/250 (72%), Gaps = 2/250 (0%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC +VRS+ DDG VL+A+LEATR +EK + TE +VPL++D I+EEVMK++ GR+MTL
Sbjct: 267 ACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTL 326
Query: 753 DHVRAALTQLGCHPSIREGE--EYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLL 580
D V A+L LGC P I + + + +VD IIE AQ DEVESI+LKRYG+DAYRMFR L
Sbjct: 327 DRVEASLAALGC-PGIDDYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFL 385
Query: 579 SKTGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHF 400
SKTG LVET+K+SD +FV++ EA KILY LWKD YL+MEK+ S LLW+V+++
Sbjct: 386 SKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYN 445
Query: 399 LKEHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSL 220
L EH+LDEM HA++NL R+A+E+ + E+L LPK K+ V+ LL SSL
Sbjct: 446 LWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSL 505
Query: 219 MKLDDAIMLF 190
+KLDDA+MLF
Sbjct: 506 VKLDDALMLF 515
>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
sativus]
Length = 518
Score = 252 bits (643), Expect = 8e-64
Identities = 136/250 (54%), Positives = 180/250 (72%), Gaps = 2/250 (0%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC +VRS+ DDG VL+A+LEATR +EK + TE +VPL++D I+EEVMK++ GR+MTL
Sbjct: 267 ACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTL 326
Query: 753 DHVRAALTQLGCHPSIREGE--EYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLL 580
D V A+L LGC P + + + + +VD IIE AQ DEVESI+LKRYG+DAYRMFR L
Sbjct: 327 DRVEASLAALGC-PGMDDYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFL 385
Query: 579 SKTGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHF 400
SKTG LVET+K+SD +FV++ EA KILY LWKD YL+MEK+ S LLW+V+++
Sbjct: 386 SKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYN 445
Query: 399 LKEHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSL 220
L EH+LDEM HA++NL R+A+E+ + E+L LPK K+ V+ LL SSL
Sbjct: 446 LWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSL 505
Query: 219 MKLDDAIMLF 190
+KLDDA+MLF
Sbjct: 506 VKLDDALMLF 515
>ref|XP_004489522.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
X2 [Cicer arietinum]
Length = 515
Score = 250 bits (638), Expect = 3e-63
Identities = 131/249 (52%), Positives = 180/249 (72%), Gaps = 5/249 (2%)
Frame = -1
Query: 921 NVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLDHVR 742
NVR+R+DDGA+TV+ AMLEATR +K + ENSVPL +D +F EV+K++ G MT+D V+
Sbjct: 267 NVRARMDDGAATVVRAMLEATRNVDKRVKIENSVPLELDQLFTEVIKTENGLQMTMDRVK 326
Query: 741 AALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKTGHL 562
A L QLGC I +++D+K+II +A+N+EVESI+LKRYG+DAYRMFR LSK
Sbjct: 327 AYLVQLGCSSQISFA---YTIDLKHIIHLARNEEVESIVLKRYGRDAYRMFRHLSKEKQF 383
Query: 561 VETDKVSDMAFVERKEALKILYNLWKDGYLHMEKI---ISHGSMQSQFLLWKVNKHFLKE 391
TDK+++ VE+KEA K+L L KD YLHMEK+ + + Q+Q L+W+VN+ L E
Sbjct: 384 CPTDKIAESTLVEKKEAPKLLNRLLKDNYLHMEKLNVSVVGSNKQTQLLMWRVNQPLLWE 443
Query: 390 HILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQ--GKRYDRIRKVKILLDSSLM 217
++LDEM HAA+NL RMA+E K+ EIL +PK K ++ K+Y R++ V +LL SSL+
Sbjct: 444 YVLDEMYHAALNLSLRMAFEQEKDEEILNVPKDKITASEPLQKKYKRLQNVCLLLGSSLL 503
Query: 216 KLDDAIMLF 190
KLDDA+MLF
Sbjct: 504 KLDDALMLF 512
>ref|XP_004489521.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
X1 [Cicer arietinum] gi|502119266|ref|XP_004496559.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC3-like [Cicer arietinum]
Length = 513
Score = 250 bits (638), Expect = 3e-63
Identities = 131/249 (52%), Positives = 180/249 (72%), Gaps = 5/249 (2%)
Frame = -1
Query: 921 NVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLDHVR 742
NVR+R+DDGA+TV+ AMLEATR +K + ENSVPL +D +F EV+K++ G MT+D V+
Sbjct: 265 NVRARMDDGAATVVRAMLEATRNVDKRVKIENSVPLELDQLFTEVIKTENGLQMTMDRVK 324
Query: 741 AALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSKTGHL 562
A L QLGC I +++D+K+II +A+N+EVESI+LKRYG+DAYRMFR LSK
Sbjct: 325 AYLVQLGCSSQISFA---YTIDLKHIIHLARNEEVESIVLKRYGRDAYRMFRHLSKEKQF 381
Query: 561 VETDKVSDMAFVERKEALKILYNLWKDGYLHMEKI---ISHGSMQSQFLLWKVNKHFLKE 391
TDK+++ VE+KEA K+L L KD YLHMEK+ + + Q+Q L+W+VN+ L E
Sbjct: 382 CPTDKIAESTLVEKKEAPKLLNRLLKDNYLHMEKLNVSVVGSNKQTQLLMWRVNQPLLWE 441
Query: 390 HILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQ--GKRYDRIRKVKILLDSSLM 217
++LDEM HAA+NL RMA+E K+ EIL +PK K ++ K+Y R++ V +LL SSL+
Sbjct: 442 YVLDEMYHAALNLSLRMAFEQEKDEEILNVPKDKITASEPLQKKYKRLQNVCLLLGSSLL 501
Query: 216 KLDDAIMLF 190
KLDDA+MLF
Sbjct: 502 KLDDALMLF 510
>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 249 bits (637), Expect = 4e-63
Identities = 135/248 (54%), Positives = 179/248 (72%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC NVR+RLD GA+ VL+AMLEAT+ EKN+ E SV L++ I E VM+S+ G +MTL
Sbjct: 280 ACIENVRARLDSGAAIVLSAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTL 339
Query: 753 DHVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSK 574
+ +RA+L QLGCHP+ + +++D+K IIE+AQNDEVES++LKRYG++A+R+FRLLSK
Sbjct: 340 ERIRASLVQLGCHPNGVGADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSK 399
Query: 573 TGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLK 394
+ +ET K+SD F+E+KEA KILY LWKD LHMEKI+ + S QSQF+LWKV K
Sbjct: 400 SCCPLETTKISDTTFIEKKEAAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFW 459
Query: 393 EHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMK 214
HILDEM HAA+NL +I++L + K +GA +R R+ ILL +SLMK
Sbjct: 460 RHILDEMYHAALNL----------SIQIIELRRDKHVGALRERDVRL---AILLQASLMK 506
Query: 213 LDDAIMLF 190
LDDA+MLF
Sbjct: 507 LDDALMLF 514
>ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3 [Medicago truncatula]
gi|355481329|gb|AES62532.1| DNA-directed RNA polymerase
III subunit RPC3 [Medicago truncatula]
Length = 505
Score = 244 bits (624), Expect = 1e-61
Identities = 135/270 (50%), Positives = 177/270 (65%), Gaps = 5/270 (1%)
Frame = -1
Query: 984 FFW*MIHHTYEYYFAL*ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMD 805
F W + Y A NVR+R+DDGA+TVL+A+LEATR +KN+ E S P T+D
Sbjct: 240 FLWRANFEEFIRYLRDKALIENVRARMDDGAATVLSAILEATRNIDKNVKIEQSAPCTLD 299
Query: 804 AIFEEVMKSKEGRTMTLDHVRAALTQLGCHPSIREGEEYFSVDVKNIIEIAQNDEVESIM 625
I EVMK++ GRTMT+D V+AAL QLGC VD K II +A+N+EVESI+
Sbjct: 300 TISSEVMKTENGRTMTMDRVKAALVQLGC-------ANQNIVDFKRIIHLARNEEVESIV 352
Query: 624 LKRYGKDAYRMFRLLSKTGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHG 445
LKRYG+DAYRMFR L K TD++++ VE+KEA K+L+ LW++ YL MEK+
Sbjct: 353 LKRYGRDAYRMFRHLLKENQFRPTDQIAEATLVEKKEAPKLLFKLWRENYLQMEKLTVSM 412
Query: 444 SMQ---SQFLLWKVNKHFLKEHILDEMCHAAVNLMQRMAYELGKEHEILQLPKS--KKIG 280
+ Q S L+WKVN+ L EH+LDEM H A+NL RMA+E K+ EIL + K +
Sbjct: 413 TSQNGTSPILMWKVNQPLLWEHVLDEMYHGALNLKLRMAFEEEKDEEILNISKKTRNESA 472
Query: 279 AQGKRYDRIRKVKILLDSSLMKLDDAIMLF 190
K+Y+R+R V +LL SSLMKLDDA+MLF
Sbjct: 473 PLQKKYERLRNVLLLLKSSLMKLDDALMLF 502
>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
[Fragaria vesca subsp. vesca]
Length = 534
Score = 238 bits (608), Expect = 9e-60
Identities = 132/257 (51%), Positives = 176/257 (68%), Gaps = 9/257 (3%)
Frame = -1
Query: 933 ACALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTL 754
AC +VR+R DDGA+ VL A+L+ATR E + T+ S PL MDAI+EEVM S+ ++
Sbjct: 275 ACIESVRARHDDGAAVVLRAVLKATRNQETKVKTDYSGPLKMDAIYEEVMDSEACPSLEQ 334
Query: 753 DHVRAALTQLGCHPSIR-----EGEEY-FSVDVKNIIEIAQNDEVESIMLKRYGKDAYRM 592
+ VRA L L P + E E+ +SVD+K IIE+ QNDEVESI+LKRYGKDAYR+
Sbjct: 335 ECVRAHLRLLCGAPLVTGEYEDENEDVLYSVDLKKIIELLQNDEVESIVLKRYGKDAYRI 394
Query: 591 FRLL---SKTGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLL 421
FRLL S G ETDK+S+MA V++KE KILY LWKD Y+HMEK+ + QSQ ++
Sbjct: 395 FRLLTSQSNAGRFFETDKISEMALVDKKETPKILYKLWKDDYVHMEKLSLTAAKQSQVMV 454
Query: 420 WKVNKHFLKEHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVK 241
WKV+K + EH+LDEM HAA NL++R +E + E+ PK K+IG K+ +R V+
Sbjct: 455 WKVHKSIVWEHVLDEMYHAAYNLVKRYDHEREENKEVTNTPKEKRIGELEKKANRFLAVR 514
Query: 240 ILLDSSLMKLDDAIMLF 190
++ SSL+KLDDA+MLF
Sbjct: 515 KIMASSLLKLDDALMLF 531
>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
RPC82 family protein [Populus trichocarpa]
Length = 520
Score = 238 bits (606), Expect = 1e-59
Identities = 130/248 (52%), Positives = 177/248 (71%), Gaps = 1/248 (0%)
Frame = -1
Query: 930 CALNVRSRLDDGASTVLNAMLEATRRTEKNIITENSVPLTMDAIFEEVMKSKEGRTMTLD 751
C VR+RLDD A+TV AML+A+R EK I T +SVPL+ ++I+ EV+KS++GR MTLD
Sbjct: 278 CIETVRTRLDDEAATVFTAMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLD 337
Query: 750 HVRAALTQLGCHPS-IREGEEYFSVDVKNIIEIAQNDEVESIMLKRYGKDAYRMFRLLSK 574
+V + L L P +R + +S+D K+ IE+AQ DE SI+ K+YGKDAYRMFRLLSK
Sbjct: 338 YVISVLVGLSSSPPFVRVVDNSYSIDFKHTIEVAQTDE--SIVYKKYGKDAYRMFRLLSK 395
Query: 573 TGHLVETDKVSDMAFVERKEALKILYNLWKDGYLHMEKIISHGSMQSQFLLWKVNKHFLK 394
G L+ETDK+SD F+E+KE IL +W+ YL MEK+I+ +QFLLWKVN L+
Sbjct: 396 AGCLLETDKISDSIFLEKKETANILSKMWQGDYLQMEKLIAG---PTQFLLWKVNMINLR 452
Query: 393 EHILDEMCHAAVNLMQRMAYELGKEHEILQLPKSKKIGAQGKRYDRIRKVKILLDSSLMK 214
E +LD+M HAA+NL R+AYEL ++ EIL L G ++Y++++KV+ LL+SS MK
Sbjct: 453 ERVLDDMFHAALNLSLRVAYELEQQKEILHLGVD---GPMKEKYEKLKKVRFLLESSRMK 509
Query: 213 LDDAIMLF 190
LDDAIM+F
Sbjct: 510 LDDAIMIF 517