BLASTX nr result

ID: Cocculus23_contig00017216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00017216
         (602 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    73   5e-11
ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...    62   1e-07
ref|XP_002322767.1| hypothetical protein POPTR_0016s06660g [Popu...    60   6e-07
ref|XP_006577719.1| PREDICTED: uncharacterized protein LOC102660...    59   1e-06
ref|XP_002309264.1| hypothetical protein POPTR_0006s21440g [Popu...    56   9e-06

>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = +3

Query: 108 CRRAMRKNRRQKKLMNSGWFGQR-RTCKCGCDETEMMKIHSMLXXXXXXXXXXXXDSLEA 284
           CRRA+R+ RR K+LM  G    R + C+CGCDETE+ +IH  +            D  E 
Sbjct: 142 CRRALRRKRR-KQLMKEGLLPARTKRCRCGCDETEI-QIHPEMIRL---------DEEET 190

Query: 285 ENG-----NXXXXXXXXXXXXXXXMWDTFYSTGFWRSPSQRES 398
           ENG     N               MW+TFYSTGFWRSPSQRE+
Sbjct: 191 ENGDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRET 233


>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/96 (36%), Positives = 47/96 (48%)
 Frame = +3

Query: 108 CRRAMRKNRRQKKLMNSGWFGQRRTCKCGCDETEMMKIHSMLXXXXXXXXXXXXDSLEAE 287
           CRRA++K R ++ +       +RR C CGCD+TE+ +IH +             D  +A+
Sbjct: 68  CRRALKKKRLRRMIKKGLLQPRRRRCPCGCDDTEL-QIHPI-----------SGDVTDAD 115

Query: 288 NGNXXXXXXXXXXXXXXXMWDTFYSTGFWRSPSQRE 395
                             MWD FYSTGFWRS SQRE
Sbjct: 116 ISVKSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151


>ref|XP_002322767.1| hypothetical protein POPTR_0016s06660g [Populus trichocarpa]
           gi|222867397|gb|EEF04528.1| hypothetical protein
           POPTR_0016s06660g [Populus trichocarpa]
          Length = 171

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 40/98 (40%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = +3

Query: 108 CRRAMRKNRRQKKLMNSGWFGQR-RTCKCG-CDETEMMKIHSMLXXXXXXXXXXXXDSLE 281
           CRRA+++ +R KKL+  G F  R R   CG CD+ E+  IH M             DSL 
Sbjct: 69  CRRALKRKQR-KKLIKKGLFPPRGRGYGCGSCDDPEL-HIHPMARVE---------DSLR 117

Query: 282 AENGNXXXXXXXXXXXXXXXMWDTFYSTGFWRSPSQRE 395
             +G                MW+TFY TGFWRSPSQRE
Sbjct: 118 EFDGEEAVKKEEAMLRLEKEMWETFYGTGFWRSPSQRE 155


>ref|XP_006577719.1| PREDICTED: uncharacterized protein LOC102660779 [Glycine max]
          Length = 175

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
 Frame = +3

Query: 108 CRRAMRKNRRQKKLMNSGWFGQRRTCKCGC-DETEMMKIHSMLXXXXXXXXXXXXDSLEA 284
           CRR ++K R QK L        RR C CGC D+    +I+ M              + E 
Sbjct: 70  CRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGSRIYPMCANDAVDVKRLCSTTTEL 129

Query: 285 ENGNXXXXXXXXXXXXXXXMWDTFYSTGFWRSPSQRESR 401
           +N +               MWD FYSTGFWRS S RE R
Sbjct: 130 DNNDDATRALEKE------MWDQFYSTGFWRSSSNREVR 162


>ref|XP_002309264.1| hypothetical protein POPTR_0006s21440g [Populus trichocarpa]
           gi|222855240|gb|EEE92787.1| hypothetical protein
           POPTR_0006s21440g [Populus trichocarpa]
          Length = 188

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 38/97 (39%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = +3

Query: 108 CRRAMRKNRRQKKLMNSGWFGQR-RTCKCGCDETEMMKIHSMLXXXXXXXXXXXXDSLEA 284
           CRRA+R+ RR KKL+  G    R R+C C  D TE+ +IH M             DSL  
Sbjct: 85  CRRALRRKRR-KKLIKKGLLPPRTRSCSCDYDGTEL-QIHPMACVE---------DSLRE 133

Query: 285 ENGNXXXXXXXXXXXXXXXMWDTFYSTGFWRSPSQRE 395
            +                 MW+TF  TGFWRS SQRE
Sbjct: 134 FDEEAALKEEEAMVKLEKEMWETFCGTGFWRSSSQRE 170


Top