BLASTX nr result
ID: Cocculus23_contig00017118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00017118
(636 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobrom... 68 8e-22
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 71 2e-20
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 74 3e-20
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 72 5e-20
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 72 5e-20
gb|AAK29467.1| polyprotein-like [Solanum chilense] 69 1e-19
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 69 2e-19
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis] 60 4e-18
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 59 2e-17
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 63 3e-17
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz... 60 5e-17
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group] 65 3e-16
emb|CAN74741.1| hypothetical protein VITISV_025583 [Vitis vinifera] 63 5e-16
gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subc... 71 2e-15
emb|CAN60994.1| hypothetical protein VITISV_036935 [Vitis vinifera] 62 6e-15
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 54 9e-15
ref|XP_003625577.1| Ubiquitin-protein ligase [Medicago truncatul... 61 1e-14
ref|XP_003613324.1| Cc-nbs-lrr resistance protein [Medicago trun... 61 1e-14
ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citr... 58 2e-14
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 59 3e-14
>ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
gi|508786946|gb|EOY34202.1| Uncharacterized protein
TCM_041944 [Theobroma cacao]
Length = 698
Score = 68.2 bits (165), Expect(2) = 8e-22
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = -2
Query: 608 SEVKYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNG--GTMLSKASS 435
S KY I+KF+ + +FSL ++M +L QQGL AL K+ L NG ++ KA S
Sbjct: 4 SSTKYEIEKFNGRNDFSLWCVKMCALLVQQGLLKALKEKEHLLSNLSNGEKDNLMEKAHS 63
Query: 434 LIRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
I L L D VI EV +E +A +W KL+ +Y++K
Sbjct: 64 AILLALSDEVIREVTDEESAIAVWLKLKSIYMTK 97
Score = 62.0 bits (149), Expect(2) = 8e-22
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = -3
Query: 325 NKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH*H 146
N+L +KQ+ ++ + EGTS+ + ++FN+++ DL N + D +L CS+ + +
Sbjct: 101 NRLYIKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDEDLALILLCSLPPSYEN 160
Query: 145 LFNTLLYGRDNLTKEQVKLVLVSTE 71
+T+LYGRD T E V+ L S E
Sbjct: 161 FMDTMLYGRDTFTFEDVRASLNSKE 185
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 70.9 bits (172), Expect(2) = 2e-20
Identities = 35/89 (39%), Positives = 57/89 (64%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASSLIRLC 420
K+ + KFD NF L Q+R+KD+L QQG+ AL ++ + M ++A++ IRL
Sbjct: 8 KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPEKIDADKWNEMKAQAAATIRLS 67
Query: 419 LVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
L D+V+Y+V++E + E+W KL L++SK
Sbjct: 68 LSDSVMYQVMDEKSPKEIWDKLASLHMSK 96
Score = 54.3 bits (129), Expect(2) = 2e-20
Identities = 30/109 (27%), Positives = 58/109 (53%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
++KL LKQQ + Q +E + L ++ + FN+LV DL + DK +L CS+ +
Sbjct: 99 TSKLYLKQQLYGLQVQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPLSYE 158
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTEKLDGEGTQTSIADDSQPLVS*DR 2
H+ TL +G+D + E++ L++ + + + + A + L+ D+
Sbjct: 159 HVVTTLTHGKDTVKTEEIISSLLARDLRRSKKNEATKASQGKSLLVKDK 207
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 73.6 bits (179), Expect(2) = 3e-20
Identities = 37/89 (41%), Positives = 58/89 (65%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASSLIRLC 420
K+ + KFD NF L Q+R+KD+L QQG+ AL ++ + M ++A++ IRL
Sbjct: 8 KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLS 67
Query: 419 LVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
L D+V+Y+V++E T+ E+W KL LY+SK
Sbjct: 68 LSDSVMYQVMDEKTSKEIWVKLTSLYMSK 96
Score = 51.2 bits (121), Expect(2) = 3e-20
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
++KL LKQQ + Q +E + L ++ + FN+LV DL + DK +L CS+ +
Sbjct: 99 TSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSYE 158
Query: 148 HLFNTLLYGRDNLTKEQVKLVL 83
H+ L +G+D + E + +L
Sbjct: 159 HVVTILTHGKDTIKTEIISSLL 180
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 72.0 bits (175), Expect(2) = 5e-20
Identities = 41/92 (44%), Positives = 58/92 (63%)
Frame = -2
Query: 608 SEVKYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASSLI 429
S + IDKF + +FSL Q++M+ +L QQG A L+ KD+ + + + KA S I
Sbjct: 2 SALNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLS-KDKNAVVTPEMAILEEKAHSTI 60
Query: 428 RLCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
LCL D+VI EV +E TAA +W KLE LY++K
Sbjct: 61 MLCLADDVITEVSDEETAAGLWLKLESLYMTK 92
Score = 52.0 bits (123), Expect(2) = 5e-20
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+NKL+LKQ+ F + EGT L ++ E N L+ +L N + D +L S+
Sbjct: 95 TNKLLLKQRLFGLRMAEGTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFE 154
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTE-KLDGEGTQTSI 38
+ + + G+D ++ E+V+ L S E + GT T I
Sbjct: 155 NFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDI 192
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 72.0 bits (175), Expect(2) = 5e-20
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASSLIRLC 420
K+ + KFD NF L Q+R+KD+L QQG+ AL ++ + M ++A++ IRL
Sbjct: 8 KFEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLS 67
Query: 419 LVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
L D+V+Y V++E T E+W KL LY+SK
Sbjct: 68 LSDSVMYPVMDEKTPKEIWDKLASLYMSK 96
Score = 52.0 bits (123), Expect(2) = 5e-20
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
++KL LKQQ + Q +E + L ++ + FN+LV DL + D +L CS+ +
Sbjct: 99 TSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDMAIILLCSLPPSYE 158
Query: 148 HLFNTLLYGRDNL-TKEQVKLVL 83
H+ TL++G+D + T+E++ +L
Sbjct: 159 HVVTTLMHGKDTVKTEEKISSLL 181
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 69.3 bits (168), Expect(2) = 1e-19
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Frame = -2
Query: 608 SEVKYMIDKFD-KKQNFSL*QLRMKDMLTQQGLKAALNTKDQL--RLKSKNGGTMLSKAS 438
S VKY + KF+ K FS+ Q RMKD+L QQGL AL K + +K ++ + KA+
Sbjct: 2 SGVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAA 61
Query: 437 SLIRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
S IRL L D+V+ +++E +A +W KLE+LY+SK
Sbjct: 62 SAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSK 96
Score = 53.1 bits (126), Expect(2) = 1e-19
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+NKL LK+Q ++ EGT+ + N L+ L N G + DK VL S+ S +
Sbjct: 99 TNKLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYD 158
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTEKL 65
L T+L+G+D++ + V L+ EK+
Sbjct: 159 TLSTTILHGKDSIQLKDVTSALLLNEKM 186
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 68.6 bits (166), Expect(2) = 2e-19
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -2
Query: 608 SEVKYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALN--TKDQLRLKSKNGGTMLSKASS 435
S VKY + KF+ FS Q RM+D+L QQGL L+ +K +K+++ + +A+S
Sbjct: 2 SGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAAS 61
Query: 434 LIRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
IRL L D+V+ +++E TA +W +LE LY+SK
Sbjct: 62 AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSK 95
Score = 53.1 bits (126), Expect(2) = 2e-19
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+NKL LK+Q ++ EGT+ + FN L+ L N G + DK +L S+ S +
Sbjct: 98 TNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYD 157
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTEKL 65
+L T+L+G+ + + V L+ EK+
Sbjct: 158 NLATTILHGKTTIELKDVTSALLLNEKM 185
>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
Length = 289
Score = 60.5 bits (145), Expect(2) = 4e-18
Identities = 30/104 (28%), Positives = 59/104 (56%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+N+L+LKQ+ ++ EGT + + +FN ++ L ++ D+ +L CS+ +
Sbjct: 91 TNRLLLKQRLYTLWMSEGTPIKSHIGEFNSVITYLSKIDVKINDEDQALLLLCSLLPSYK 150
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTEKLDGEGTQTSIADDSQPL 17
H +T++YGRD++ + K L++TEK++ E T + D + L
Sbjct: 151 HFRDTMIYGRDSIGIKDAKENLLNTEKINKELTTSESGDKADGL 194
Score = 57.4 bits (137), Expect(2) = 4e-18
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAAL--NTKDQLRLKSKNGGTMLSKASSLIR 426
K+ I+KF+ +FSL + GLK AL +K + + ++ + +A + I+
Sbjct: 7 KWNIEKFEDNISFSL---------WESGLKKALFGKSKKPVTMTEEDWNQLEDRALTTIQ 57
Query: 425 LCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
LCL + V+ EVL E T A++W KLEDLYL K
Sbjct: 58 LCLTNEVMQEVLTEKTTADLWSKLEDLYLMK 88
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 59.3 bits (142), Expect(2) = 2e-17
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Frame = -2
Query: 608 SEVKYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLR--LKSKNGGTMLSKASS 435
S K+ ++KF+ +F+L +L+MK +L QQ A+ ++ L L + ++S+A S
Sbjct: 2 SSQKFEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEETLPVGLTAVEKEEVVSRAHS 61
Query: 434 LIRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
I L L D V+ EV +ETTA +W+K E Y K
Sbjct: 62 AILLSLADEVLREVADETTAVGLWRKFESKYQKK 95
Score = 56.2 bits (134), Expect(2) = 2e-17
Identities = 26/86 (30%), Positives = 49/86 (56%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+N+L K+Q + + EG + + +FN+++ DL G V D+ +L CS+ S +
Sbjct: 98 TNRLYQKRQLHTLKMSEGMQVRDHLNNFNRIILDLNGVGVKVEEEDQAMILLCSLPSSYE 157
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTE 71
+ +T++YGR++++ VK L S E
Sbjct: 158 NFVDTMMYGRBSISXNDVKDALQSKE 183
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 63.2 bits (152), Expect(2) = 3e-17
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQL--RLKSKNGGTMLSKASSLIR 426
K+ ++KF K +F L +L+M+ +L QQGL+ AL + L ++ K +L KA S I
Sbjct: 5 KFDVEKFTGKNDFGLXRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSAII 64
Query: 425 LCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
L L D V+ E + +AAE+W KLE LY++K
Sbjct: 65 LSLGDTVLREXAKAKSAAEVWLKLESLYMTK 95
Score = 51.6 bits (122), Expect(2) = 3e-17
Identities = 25/86 (29%), Positives = 52/86 (60%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+N+L K + ++ + G S+ + + FNK++ DL N +S DK +L S+ + +
Sbjct: 98 ANRLHKKIKLYTFKMTPGMSIEXHLDHFNKIILDLENIDITISDEDKAILLLTSLDASYT 157
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTE 71
++ + ++YGRD+LT ++V+ +L + E
Sbjct: 158 NMKDAIMYGRDSLTFDEVQSILHARE 183
>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
Group] gi|108706491|gb|ABF94286.1| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 556
Score = 60.5 bits (145), Expect(2) = 5e-17
Identities = 30/73 (41%), Positives = 47/73 (64%)
Frame = -2
Query: 551 QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASSLIRLCLVDNVIYEVLEETTAA 372
Q+R+KD+L QQG+ AL ++ M ++A+++IRL L D V+Y+V++E T
Sbjct: 155 QMRLKDLLAQQGISKALEETMPEKMDVGKWVEMKAQATAIIRLSLSDFVMYQVMDEKTPK 214
Query: 371 EMWKKLEDLYLSK 333
E+W KL LY+SK
Sbjct: 215 EIWDKLASLYMSK 227
Score = 53.5 bits (127), Expect(2) = 5e-17
Identities = 29/105 (27%), Positives = 55/105 (52%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
++KL LKQQ + Q +E + L ++ + FN+LV DL + DK +L CS+
Sbjct: 230 TSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSFE 289
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTEKLDGEGTQTSIADDSQPLV 14
H+ TL +G+D + E++ L++ + + + A ++ L+
Sbjct: 290 HVVTTLTHGKDTVKTEEIISSLLARDLRRSKKNEAMEASQAESLL 334
>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
Length = 478
Score = 65.5 bits (158), Expect(2) = 3e-16
Identities = 34/90 (37%), Positives = 55/90 (61%)
Frame = -2
Query: 602 VKYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASSLIRL 423
+K+ + KFD NF L Q R+KD+L QQ + AL +++ + M +A++ IR
Sbjct: 88 MKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVKPAKMEDDDCEEMQLQAAATIRR 147
Query: 422 CLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
CL D ++Y V+EET+ +W+KLE ++SK
Sbjct: 148 CLSDQIMYHVMEETSPKIIWEKLEAQFMSK 177
Score = 45.8 bits (107), Expect(2) = 3e-16
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+NK LKQ+ + + +EG LT + FN+LV DL+ V DK VL CS+ +
Sbjct: 180 TNKRYLKQKLYGLKMQEGADLTAHVNVFNQLVTDLVKMDVEVDDEDKAIVLLCSLPESYE 239
Query: 148 HL 143
H+
Sbjct: 240 HV 241
>emb|CAN74741.1| hypothetical protein VITISV_025583 [Vitis vinifera]
Length = 253
Score = 63.2 bits (152), Expect(2) = 5e-16
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQL--RLKSKNGGTMLSKASSLIR 426
K+ +++F K +F L +L+M+ L QQGL+ AL + L ++ K+ +L KA S I
Sbjct: 5 KFDVEEFTSKNDFRLWRLKMRAFLVQQGLQDALLREKNLLSTMQEKHKIELLEKAHSAIV 64
Query: 425 LCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
L L D ++ EV + +AAE+W KLE LY++K
Sbjct: 65 LSLGDTLLREVAKAKSAAELWLKLESLYMTK 95
Score = 47.4 bits (111), Expect(2) = 5e-16
Identities = 25/85 (29%), Positives = 50/85 (58%)
Frame = -3
Query: 325 NKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH*H 146
N+L K + ++ + G S+ ++ + FNK++ DL N VV DK +L S+ + + +
Sbjct: 99 NRLHKKIKLYTFKMIPGMSIEEHLDHFNKIILDLENIDIVVLDEDKAIMLPTSLDASYTN 158
Query: 145 LFNTLLYGRDNLTKEQVKLVLVSTE 71
+ ++Y RDN+T ++V+ +L + E
Sbjct: 159 MKEAIMYERDNMTFDEVQSILHARE 183
>gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 375
Score = 70.9 bits (172), Expect(2) = 2e-15
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASSLIRLC 420
K+ + KFD +NF L Q+R+KD+L QQG+ AL ++ M ++A++ IRL
Sbjct: 8 KFEVVKFDGTRNFVLSQMRLKDLLAQQGISKALEETMPEKMDDDKWDEMKAQAAATIRLR 67
Query: 419 LVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
L D V+Y+V++E + E+W KL LY+SK
Sbjct: 68 LSDFVMYQVMDEKSPKEIWDKLASLYMSK 96
Score = 37.7 bits (86), Expect(2) = 2e-15
Identities = 21/100 (21%), Positives = 48/100 (48%)
Frame = -3
Query: 313 LKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH*HLFNT 134
L + S + ++L ++ + FN+ V DL + DK +L CS+ + H+ T
Sbjct: 89 LASLYMSKSLTKESNLRKHVDVFNQWVVDLSKLDVKLDDKDKAIILLCSLPPSYEHVVTT 148
Query: 133 LLYGRDNLTKEQVKLVLVSTEKLDGEGTQTSIADDSQPLV 14
L +G+ + E++ L++ + + + + A ++ L+
Sbjct: 149 LTHGKGTVKTEEIISSLLARDLRRSKKNEATEASQAESLL 188
>emb|CAN60994.1| hypothetical protein VITISV_036935 [Vitis vinifera]
Length = 209
Score = 61.6 bits (148), Expect(2) = 6e-15
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTS-LTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH 152
+N L LK ++ Q KEGTS + + ++FNK + DL N + ++T +L CS+ + +
Sbjct: 49 TNLLNLKNWLYTLQMKEGTSTIKNHLDEFNKTIMDLRNIDVRIDDENQTIILMCSLSNSY 108
Query: 151 *HLFNTLLYGRDNLTKEQVKLVLVSTE 71
H NT++YGRD + E V+ L S E
Sbjct: 109 EHFLNTMVYGRDTIYIENVRAALNSRE 135
Score = 45.4 bits (106), Expect(2) = 6e-15
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = -2
Query: 455 MLSKASSLIRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSKEFQQI 318
++ KA S I LCL + V+ EV+EE T ++W KLE LY++K +
Sbjct: 6 LMEKAHSAILLCLGNEVLREVVEEDTTTKLWLKLESLYMTKSLTNL 51
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 53.5 bits (127), Expect(2) = 9e-15
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGG-------TMLSKA 441
++ I+KF +FSL +L+MK +L QGL++AL+ +D L++ G + ++A
Sbjct: 5 RHEIEKFTIGGDFSLWKLKMKALLVHQGLESALDEED---LEASTGSGIDDKRRQIQNRA 61
Query: 440 SSLIRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
S + L L D+++ E+ EE TA +W K+E L + K
Sbjct: 62 HSTLILSLGDSILREISEEKTALGIWNKVETLCMKK 97
Score = 52.8 bits (125), Expect(2) = 9e-15
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEV-VSPVDKTFVLFCSVRSLH 152
+++L LK++ ++ +EG ++ + + FNK++ DL V + DK F L S+ +
Sbjct: 100 AHRLFLKKRLYTFSMREGVTIQDHIDTFNKIILDLEGVENVKICDEDKAFFLLSSLPKSY 159
Query: 151 *HLFNTLLYGRDNLTKEQVKLVLVSTE 71
+T+LYGR LT E VK L S E
Sbjct: 160 EGFVDTMLYGRTTLTLEDVKASLSSKE 186
>ref|XP_003625577.1| Ubiquitin-protein ligase [Medicago truncatula]
gi|355500592|gb|AES81795.1| Ubiquitin-protein ligase
[Medicago truncatula]
Length = 1405
Score = 61.2 bits (147), Expect(2) = 1e-14
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQL--RLKSKNGGTMLSKASSLIR 426
K+ I+KF +F L +++M+ +L QQ + AL + L + M+ KA S +
Sbjct: 4 KWDIEKFTGDNDFGLWKVKMEAVLIQQKCEKALKGEGSLPVTMSQAEKTEMVDKARSAVV 63
Query: 425 LCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
LCL D V+ EV +E TAA +W KLE LY++K
Sbjct: 64 LCLGDKVLREVAKEATAASIWAKLESLYMTK 94
Score = 44.7 bits (104), Expect(2) = 1e-14
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+++ LKQQ +S + E ++ + +FNK++ DL N + DK +L C++
Sbjct: 97 AHRQFLKQQLYSFRMVESKAIMEQLTEFNKILDDLENIEVQLEDEDKAILLLCALPKSFE 156
Query: 148 HLFNTLLYGRD-NLTKEQVKLVLVSTE 71
+T+LYG++ +T E+V+ L + E
Sbjct: 157 SFKDTMLYGKEGTVTLEEVQAALRTKE 183
>ref|XP_003613324.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
gi|355514659|gb|AES96282.1| Cc-nbs-lrr resistance
protein [Medicago truncatula]
Length = 1104
Score = 61.2 bits (147), Expect(2) = 1e-14
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = -2
Query: 599 KYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQL--RLKSKNGGTMLSKASSLIR 426
K+ I+KF +F L +++M+ +L QQ + AL + L + M+ KA S +
Sbjct: 4 KWDIEKFTGDNDFGLWKVKMEAVLIQQKCEKALKGEGSLPVTMSQAEKTEMVDKARSAVV 63
Query: 425 LCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
LCL D V+ EV +E TAA +W KLE LY++K
Sbjct: 64 LCLGDKVLREVAKEATAASIWAKLESLYMTK 94
Score = 44.7 bits (104), Expect(2) = 1e-14
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
+++ LKQQ +S + E ++ + +FNK++ DL N + DK +L C++
Sbjct: 97 AHRQFLKQQLYSFRMVESKAIMEQLTEFNKILDDLENIEVQLEDEDKAILLLCALPKSFE 156
Query: 148 HLFNTLLYGRD-NLTKEQVKLVLVSTE 71
+T+LYG++ +T E+V+ L + E
Sbjct: 157 SFKDTMLYGKEGTVTLEEVQAALRTKE 183
>ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citrus clementina]
gi|557534133|gb|ESR45251.1| hypothetical protein
CICLE_v10003098mg [Citrus clementina]
Length = 182
Score = 58.2 bits (139), Expect(2) = 2e-14
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
SN+L LK++F + + EGT + + N +V +L G + DK L S+ + +
Sbjct: 76 SNRLYLKERFHTLRMTEGTKIFDHLSVLNGIVLELEAIGVKIEDGDKALRLLWSLPTSYK 135
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTE-KLDGEGTQTS 41
HL TL+YG++ + E+V L+S E +L GE T+T+
Sbjct: 136 HLLPTLMYGKETVNLEEVTNTLLSEERRLSGESTETT 172
Score = 47.0 bits (110), Expect(2) = 2e-14
Identities = 31/94 (32%), Positives = 43/94 (45%)
Frame = -2
Query: 614 YGSEVKYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLSKASS 435
+ S VK+ I+KFD + NF L Q+++KD+L Q GL AL K S +G
Sbjct: 6 FSSPVKFEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPSPASNSGSG--------- 56
Query: 434 LIRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSK 333
T E+W+KLE LY +K
Sbjct: 57 -----------------KTTKELWEKLEKLYRTK 73
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 58.5 bits (140), Expect(2) = 3e-14
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = -2
Query: 608 SEVKYMIDKFDKKQNFSL*QLRMKDMLTQQGLKAALNTKDQLRLKSKNGGTMLS-KASSL 432
+ +KY + D+ FSL Q++M+ +L QQ L AL+ D+ N KA S
Sbjct: 2 ASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSRFDKRTQDWSNDEKKRDRKAMSY 61
Query: 431 IRLCLVDNVIYEVLEETTAAEMWKKLEDLYLSKE 330
I L L +N+++EVL+E TAA +W KLE + ++K+
Sbjct: 62 IHLHLSNNILHEVLKEETAAGLWLKLEQICMTKD 95
Score = 45.8 bits (107), Expect(2) = 3e-14
Identities = 26/88 (29%), Positives = 48/88 (54%)
Frame = -3
Query: 328 SNKLILKQQFFSSQRKEGTSLTQYFEDFNKLVCDLINSGEVVSPVDKTFVLFCSVRSLH* 149
++K+ LKQ+ F + ++ S+ + F ++V DL + D +L CS+ S +
Sbjct: 97 TSKMHLKQKLFLHKLQDDESVMDHLSAFKEIVTDLESMEVKYDEEDLGLILLCSLPSSYA 156
Query: 148 HLFNTLLYGRDNLTKEQVKLVLVSTEKL 65
+ +T+LY RD LT ++V L + EK+
Sbjct: 157 NFRDTILYSRDTLTLKEVYDTLHAKEKM 184