BLASTX nr result

ID: Cocculus23_contig00016894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00016894
         (345 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299438.2| hypothetical protein POPTR_0001s11190g [Popu...    60   2e-07

>ref|XP_002299438.2| hypothetical protein POPTR_0001s11190g [Populus trichocarpa]
           gi|550347004|gb|EEE84243.2| hypothetical protein
           POPTR_0001s11190g [Populus trichocarpa]
          Length = 353

 Score = 60.5 bits (145), Expect(2) = 2e-07
 Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 35/99 (35%)
 Frame = +1

Query: 94  KRF*RAIASRELSKLIEPWEAWCLKP-----------------FVEFNTAIPFF*SI--- 213
           K F RA+AS ELSKL+EPW+ W LK                   V+    + FF S+   
Sbjct: 105 KHFQRAVASGELSKLVEPWDPWWLKKEPDLFSHLPKRKHHHHMMVQGTNLVRFFLSLIPP 164

Query: 214 ---------------HLINVVYNYCFTLQLYDGEWHSDA 285
                          HL +++Y+YCFT +LY+G+W SDA
Sbjct: 165 VRKLVSREPSPFLAYHLGDIIYSYCFTQRLYNGDWQSDA 203



 Score = 20.4 bits (41), Expect(2) = 2e-07
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 62  LSFDDLSGEEINVFE 106
           ++FDDLS EE   F+
Sbjct: 94  INFDDLSAEEKKHFQ 108


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