BLASTX nr result
ID: Cocculus23_contig00016808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00016808
(286 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group] g... 68 1e-09
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera] 67 3e-09
gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis] 67 3e-09
ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006645208.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily p... 66 4e-09
ref|XP_004301025.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_006829716.1| hypothetical protein AMTR_s00126p00080460 [A... 66 6e-09
ref|XP_004972303.1| PREDICTED: putative pentatricopeptide repeat... 65 7e-09
ref|XP_007203614.1| hypothetical protein PRUPE_ppa002292mg [Prun... 65 7e-09
ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat... 65 7e-09
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat... 65 7e-09
tpg|DAA56180.1| TPA: hypothetical protein ZEAMMB73_301223 [Zea m... 65 1e-08
gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays] 65 1e-08
ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat... 65 1e-08
gb|EYU37438.1| hypothetical protein MIMGU_mgv1a002659mg [Mimulus... 65 1e-08
gb|EYU26534.1| hypothetical protein MIMGU_mgv1a024701mg, partial... 65 1e-08
>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDN 122
QKLF+++P+ G + +LAN+YA MWDK A VR AME+K + KTPG SW E N
Sbjct: 640 QKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRN 694
>ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|20161377|dbj|BAB90301.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa
Japonica Group] gi|125573076|gb|EAZ14591.1| hypothetical
protein OsJ_04514 [Oryza sativa Japonica Group]
Length = 533
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = -1
Query: 283 KLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEE 128
KLFE+EP N GNY +L+N+YAEK W++A +R M + FK PGSSW E+
Sbjct: 470 KLFELEPHNTGNYIMLSNIYAEKEQWEEAERIRSVMRTRLPFKQPGSSWVED 521
>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDNYNNM 110
+KLFE+EP NPGNY +L+N+YA K MW++ VR M+ K + K PG SW E N +M
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHM 637
>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDNYNNM 110
+KLFE+EP NPGNY +L+N+YA K MW++ VR M+ K + K PG SW E N +M
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHM 637
>gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]
Length = 728
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDNYNNM 110
+KLFE+EP NPGNY +L+N+Y K MW + VR M +K + K PG SW E N +M
Sbjct: 549 EKLFELEPRNPGNYVILSNIYGSKGMWSQVDRVRDMMNQKGLRKNPGCSWIEVKNEVHM 607
>ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 776
Score = 66.6 bits (161), Expect = 3e-09
Identities = 26/52 (50%), Positives = 40/52 (76%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTE 131
++LFE+EP N GNY +LA++YAE +MWD+ V+R +E++++ K PG SW E
Sbjct: 597 KRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKRLLEDRELQKVPGRSWME 648
>ref|XP_006645208.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like isoform X1 [Oryza brachyantha]
gi|573915102|ref|XP_006645209.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g29230-like isoform X2 [Oryza brachyantha]
Length = 540
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = -1
Query: 283 KLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTE 131
KLFE+EP N GNY +L+++YAEK W++A +R M+ K FK PGSSW E
Sbjct: 477 KLFELEPRNTGNYIMLSSIYAEKEQWEEAERIRSLMKMKLPFKQPGSSWVE 527
>ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508723216|gb|EOY15113.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 758
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDNYNNM 110
Q LF++EP NPGNY +L+N+YA K MWD+ +VR M + + K PG SW E N +M
Sbjct: 579 QNLFKLEPSNPGNYILLSNIYASKGMWDEVDAVRDVMRSRGMKKNPGCSWIEIKNQVHM 637
>ref|XP_004301025.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Fragaria vesca subsp. vesca]
Length = 568
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTE 131
+KLF +EPEN GNY +L+++YA K WD+A VR AM +K K PG SW E
Sbjct: 504 EKLFRLEPENTGNYMLLSSIYASKEQWDEARKVREAMNKKSGIKLPGFSWVE 555
>ref|XP_006829716.1| hypothetical protein AMTR_s00126p00080460 [Amborella trichopoda]
gi|548835235|gb|ERM97132.1| hypothetical protein
AMTR_s00126p00080460 [Amborella trichopoda]
Length = 358
Score = 65.9 bits (159), Expect = 6e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDNY 119
++LF +EPENPGNY L+N+Y WD AASVRR ME + + K G SW E + +
Sbjct: 303 ERLFVLEPENPGNYITLSNIYVRVGRWDDAASVRRRMESRALMKPSGCSWIEAEGH 358
>ref|XP_004972303.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Setaria italica]
Length = 462
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = -1
Query: 283 KLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEE 128
KLFE+EP N GNY +L+N+YA K +W++A VR M K FK PGS+W E+
Sbjct: 399 KLFELEPGNTGNYILLSNIYAGKELWEEAERVRSLMRTKLPFKKPGSTWVED 450
>ref|XP_007203614.1| hypothetical protein PRUPE_ppa002292mg [Prunus persica]
gi|462399145|gb|EMJ04813.1| hypothetical protein
PRUPE_ppa002292mg [Prunus persica]
Length = 691
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTE 131
+ LFE+EPENP Y LAN+YA MWD+ VR+ M+E+ V K PG SW E
Sbjct: 512 EALFEIEPENPATYITLANIYATGGMWDEVTKVRKTMDERGVIKKPGLSWIE 563
>ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEED 125
QKL E+EPEN GNY +L+N+YA W+ ++R M+EK V K PG SW E D
Sbjct: 459 QKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELD 512
>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDN 122
+KL EM+P+N G +LAN+YAE WD+ VRR ++EK +KTPG SW E DN
Sbjct: 480 KKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDN 534
>ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEED 125
QKL E+EPEN GNY +L+N+YA W+ ++R M+EK V K PG SW E D
Sbjct: 487 QKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELD 540
>tpg|DAA56180.1| TPA: hypothetical protein ZEAMMB73_301223 [Zea mays]
Length = 534
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1
Query: 283 KLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEE 128
KLFE+EP N GNY +L+N+YA K +W++A VR M K FK+PGS+W E+
Sbjct: 471 KLFELEPWNTGNYILLSNIYAGKELWEEAERVRSLMRTKLPFKSPGSTWFED 522
>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 65.1 bits (157), Expect = 1e-08
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEEDN 122
+KLF +EP N GNY +L+N+Y+ + MWD+ A VR+ M+E+ V K PG SW + N
Sbjct: 742 EKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKN 796
>ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 531
Score = 65.1 bits (157), Expect = 1e-08
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 283 KLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTEE 128
KLFE+EP N GNY +L+N+YA K W++A +R M K FK PGS+W E+
Sbjct: 470 KLFELEPRNTGNYILLSNIYAGKEQWEEAERIRSLMRTKLPFKQPGSTWVED 521
>gb|EYU37438.1| hypothetical protein MIMGU_mgv1a002659mg [Mimulus guttatus]
Length = 649
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTE 131
++LFE+EP NPGNY +L+N+YA+ +WDK SVR MEE+ + K G SW +
Sbjct: 469 KQLFEIEPTNPGNYVMLSNIYAKAGIWDKVHSVRELMEERGIKKEAGCSWVQ 520
>gb|EYU26534.1| hypothetical protein MIMGU_mgv1a024701mg, partial [Mimulus
guttatus]
Length = 518
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = -1
Query: 286 QKLFEMEPENPGNYAVLANMYAEKRMWDKAASVRRAMEEKKVFKTPGSSWTE 131
+KLF +EPEN GNY +L+NMYAE MW++ S+R ++ K V K PG SW E
Sbjct: 339 KKLFVLEPENSGNYVILSNMYAEAGMWEEVDSLRGVLKSKCVKKNPGCSWIE 390