BLASTX nr result
ID: Cocculus23_contig00016690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00016690
(265 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 118 4e-28
emb|CAN76841.1| hypothetical protein VITISV_004490 [Vitis vinifera] 112 2e-27
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera] 108 3e-26
emb|CAN74164.1| hypothetical protein VITISV_026444 [Vitis vinifera] 108 4e-26
emb|CAN64190.1| hypothetical protein VITISV_002428 [Vitis vinifera] 106 2e-25
emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera] 108 7e-23
emb|CAN64507.1| hypothetical protein VITISV_008916 [Vitis vinifera] 97 9e-23
emb|CAN67331.1| hypothetical protein VITISV_010354 [Vitis vinifera] 100 1e-22
emb|CAN78206.1| hypothetical protein VITISV_023427 [Vitis vinifera] 98 2e-22
emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera] 95 3e-22
emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera] 100 6e-22
emb|CBI20118.3| unnamed protein product [Vitis vinifera] 95 1e-17
emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera] 91 1e-16
emb|CAN82950.1| hypothetical protein VITISV_032128 [Vitis vinifera] 90 4e-16
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa] 87 2e-15
emb|CAE05252.2| OSJNBb0115I09.14 [Oryza sativa Japonica Group] 84 2e-14
gb|ABA97777.1| transposon protein, putative, unclassified [Oryza... 82 8e-14
gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sa... 82 8e-14
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group] 82 8e-14
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group] 82 8e-14
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 118 bits (295), Expect(2) = 4e-28
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P +VR+YNPQEKKLDPRTIS YFIGYAERSKGYRFYCP++ TRIVESRNAKF+ENDLISG
Sbjct: 628 PSEVRIYNPQEKKLDPRTISGYFIGYAERSKGYRFYCPHHITRIVESRNAKFIENDLISG 687
Query: 83 SDNQR 69
SD R
Sbjct: 688 SDQLR 692
Score = 32.3 bits (72), Expect(2) = 4e-28
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q +D+ SE D+I +QPSTS++RL+++
Sbjct: 690 QLRDLGSEIDYIESQPSTSNERLVVI 715
>emb|CAN76841.1| hypothetical protein VITISV_004490 [Vitis vinifera]
Length = 906
Score = 112 bits (280), Expect(2) = 2e-27
Identities = 52/64 (81%), Positives = 58/64 (90%)
Frame = -3
Query: 260 FKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGS 81
F+VR+YNPQEKKLDPRTIS YFIGYAE+SKGYRFYCP ++TRIVESRNAKFLE DL+ GS
Sbjct: 497 FEVRIYNPQEKKLDPRTISGYFIGYAEKSKGYRFYCPSHNTRIVESRNAKFLEYDLVGGS 556
Query: 80 DNQR 69
D R
Sbjct: 557 DQFR 560
Score = 35.4 bits (80), Expect(2) = 2e-27
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IVS+ DH +QPSTSSDRL IV
Sbjct: 558 QFRNIVSDIDHTESQPSTSSDRLFIV 583
>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
Length = 745
Score = 108 bits (271), Expect(2) = 3e-26
Identities = 50/63 (79%), Positives = 58/63 (92%)
Frame = -3
Query: 257 KVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSD 78
+VR+YNPQEKKLDPRTIS YFIGYAE+SKGY+FYCP ++TRIVESRNAKFL+ DL+SGSD
Sbjct: 9 EVRIYNPQEKKLDPRTISGYFIGYAEKSKGYKFYCPSHNTRIVESRNAKFLKYDLVSGSD 68
Query: 77 NQR 69
R
Sbjct: 69 QFR 71
Score = 35.4 bits (80), Expect(2) = 3e-26
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IVS+ DH +QPSTSSDRL IV
Sbjct: 69 QFRNIVSDIDHTESQPSTSSDRLFIV 94
>emb|CAN74164.1| hypothetical protein VITISV_026444 [Vitis vinifera]
Length = 689
Score = 108 bits (271), Expect(2) = 4e-26
Identities = 52/63 (82%), Positives = 56/63 (88%)
Frame = -3
Query: 257 KVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSD 78
KVR+YNPQEKKLDPRTIS YFI YAE+SKGYRFYCP +S RIVESRNAKFLE DL+SGSD
Sbjct: 568 KVRIYNPQEKKLDPRTISGYFIRYAEKSKGYRFYCPSHSIRIVESRNAKFLEYDLVSGSD 627
Query: 77 NQR 69
R
Sbjct: 628 QFR 630
Score = 34.7 bits (78), Expect(2) = 4e-26
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IV + DH ++QPSTSSDRL IV
Sbjct: 628 QFRNIVFDIDHTMSQPSTSSDRLFIV 653
>emb|CAN64190.1| hypothetical protein VITISV_002428 [Vitis vinifera]
Length = 950
Score = 106 bits (264), Expect(2) = 2e-25
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = -3
Query: 257 KVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSD 78
+VR+YNPQEKKLDPRTIS YFIGY E+SKGYRFYCP ++TRIVESRN KFLE DL+ GSD
Sbjct: 492 EVRIYNPQEKKLDPRTISGYFIGYVEKSKGYRFYCPSHNTRIVESRNDKFLEYDLVGGSD 551
Query: 77 NQR 69
R
Sbjct: 552 QFR 554
Score = 35.4 bits (80), Expect(2) = 2e-25
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IVS+ DH +QPSTSSDRL IV
Sbjct: 552 QFRNIVSDIDHTESQPSTSSDRLFIV 577
>emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera]
Length = 635
Score = 108 bits (271), Expect(2) = 7e-23
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = -3
Query: 254 VRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSDN 75
VR+YNPQEKKLDPRTIS YFIGYA+ SKGYRFYCP ++TRIVESRNAKFLE DL+SGSD
Sbjct: 440 VRIYNPQEKKLDPRTISGYFIGYAKNSKGYRFYCPSHNTRIVESRNAKFLEYDLVSGSDQ 499
Query: 74 QR 69
R
Sbjct: 500 FR 501
Score = 23.9 bits (50), Expect(2) = 7e-23
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTS 22
Q ++IVS+ DH QPSTS
Sbjct: 499 QFRNIVSDIDHTEYQPSTS 517
>emb|CAN64507.1| hypothetical protein VITISV_008916 [Vitis vinifera]
Length = 621
Score = 96.7 bits (239), Expect(2) = 9e-23
Identities = 46/62 (74%), Positives = 52/62 (83%)
Frame = -3
Query: 254 VRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSDN 75
+R+YN QEKKLD RTIS YFIGY ERSKGYRFYCP + T+IVESRN KFLE DL+SGS+
Sbjct: 93 MRIYNLQEKKLDRRTISGYFIGYVERSKGYRFYCPSHITKIVESRNTKFLEYDLVSGSNQ 152
Query: 74 QR 69
R
Sbjct: 153 FR 154
Score = 35.8 bits (81), Expect(2) = 9e-23
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IVS+ DHI +QPSTSSD+L +V
Sbjct: 152 QFRNIVSDIDHIESQPSTSSDKLFVV 177
>emb|CAN67331.1| hypothetical protein VITISV_010354 [Vitis vinifera]
Length = 490
Score = 100 bits (249), Expect(2) = 1e-22
Identities = 47/63 (74%), Positives = 56/63 (88%)
Frame = -3
Query: 257 KVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSD 78
+VR+Y+ QEKKLDPRTIS YFIGY +RSKGYRFYCP +ST+IVESRNAKFLE DL++GS+
Sbjct: 9 EVRIYHLQEKKLDPRTISGYFIGYIKRSKGYRFYCPSHSTKIVESRNAKFLEYDLVNGSN 68
Query: 77 NQR 69
R
Sbjct: 69 QFR 71
Score = 31.6 bits (70), Expect(2) = 1e-22
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IVS+ D I +QPSTSSD+L +V
Sbjct: 69 QFRNIVSDIDLIESQPSTSSDKLFVV 94
>emb|CAN78206.1| hypothetical protein VITISV_023427 [Vitis vinifera]
Length = 339
Score = 97.8 bits (242), Expect(2) = 2e-22
Identities = 48/61 (78%), Positives = 54/61 (88%)
Frame = -3
Query: 260 FKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGS 81
+KVRVYN QE KLD RTIS YFIGY+ERSKGYRFY P ++T+IVE RNAKFLENDLISGS
Sbjct: 133 WKVRVYNLQENKLDSRTISVYFIGYSERSKGYRFYYPSHNTKIVEVRNAKFLENDLISGS 192
Query: 80 D 78
+
Sbjct: 193 N 193
Score = 33.5 bits (75), Expect(2) = 2e-22
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2
Query: 72 KDIVSERDHIIAQPSTSSDRLIIV 1
+DI ER HI AQPST SDRLI++
Sbjct: 196 QDIGFERAHIDAQPSTLSDRLIVI 219
>emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera]
Length = 1255
Score = 95.1 bits (235), Expect(2) = 3e-22
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = -3
Query: 236 QEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSDNQR 69
+EKKLDPRTIS YFIGY E+SKGYRFYCP +STRIVESRNAKFLE DL+ GSD R
Sbjct: 728 KEKKLDPRTISGYFIGYVEKSKGYRFYCPSHSTRIVESRNAKFLEYDLVXGSDQFR 783
Score = 35.4 bits (80), Expect(2) = 3e-22
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IVS+ DH +QPSTSSDRL IV
Sbjct: 781 QFRNIVSDIDHTESQPSTSSDRLFIV 806
>emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera]
Length = 1077
Score = 100 bits (248), Expect(2) = 6e-22
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = -3
Query: 257 KVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSD 78
+VR+YNPQEKKLDPRTIS YFIGY E+ KGY FYCP ++TRIVESRNAKF++ DL+SG D
Sbjct: 350 EVRIYNPQEKKLDPRTISGYFIGYVEKFKGYIFYCPSHNTRIVESRNAKFMKYDLVSGID 409
Query: 77 NQR 69
R
Sbjct: 410 QFR 412
Score = 29.6 bits (65), Expect(2) = 6e-22
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2
Query: 78 QSKDIVSERDHIIAQPSTSSDRLIIV 1
Q ++IVS+ DH +Q ST SDRL +V
Sbjct: 410 QFRNIVSDIDHTKSQSSTLSDRLFVV 435
>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
Length = 1354
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P + R+YNP EKKLD RT+S YFIGY ++SKGYRFYCP +S RIVE+ NA+FLEN ISG
Sbjct: 1043 PAEARIYNPHEKKLDSRTVSGYFIGYPDKSKGYRFYCPNHSVRIVETGNARFLENGEISG 1102
Query: 83 SDNQR 69
S+ R
Sbjct: 1103 SNEPR 1107
>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
Length = 2026
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P + R+YNP EKKLD RTIS YFIGY ++SKGY FYCP + RIVE+ NA+FLEN ISG
Sbjct: 436 PAETRIYNPHEKKLDSRTISGYFIGYPDKSKGYXFYCPNHXVRIVETXNARFLENGEISG 495
Query: 83 SDNQR 69
S+ R
Sbjct: 496 SNEPR 500
>emb|CAN82950.1| hypothetical protein VITISV_032128 [Vitis vinifera]
Length = 460
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = -3
Query: 254 VRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGSDN 75
+R+YNPQEKKLDP TI+ YFIGY E SK YRFYCP ++T IVESRNAKFLE DL + +
Sbjct: 93 MRIYNPQEKKLDPMTINGYFIGYVESSKRYRFYCPSHNTNIVESRNAKFLEYDLYNAMKD 152
Query: 74 Q 72
+
Sbjct: 153 E 153
>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
Length = 931
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P +V++YNP EKKLD RT+S +FIGY E+SKGY FYCP +S RIVE+ NA+F+EN SG
Sbjct: 367 PAEVKLYNPHEKKLDSRTVSGFFIGYPEKSKGYTFYCPNHSMRIVETGNARFIENIETSG 426
Query: 83 SDNQR 69
S R
Sbjct: 427 SGKPR 431
>emb|CAE05252.2| OSJNBb0115I09.14 [Oryza sativa Japonica Group]
Length = 853
Score = 84.3 bits (207), Expect = 2e-14
Identities = 36/64 (56%), Positives = 50/64 (78%)
Frame = -3
Query: 260 FKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISGS 81
F+ +++NPQ KKLDP+T+S +FIGY E SKGYRFYCP T+ +E+R+A FLEN+ + GS
Sbjct: 554 FQAKIFNPQLKKLDPKTVSCHFIGYPETSKGYRFYCPDRVTKFLETRHAVFLENNEVCGS 613
Query: 80 DNQR 69
+R
Sbjct: 614 SQER 617
>gb|ABA97777.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1378
Score = 82.0 bits (201), Expect = 8e-14
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P + +V+NP KLDP+T+S +FIGY ERSKGYRFYCP + T+ VE+R+A FLE+++I G
Sbjct: 681 PAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRG 740
Query: 83 S 81
S
Sbjct: 741 S 741
>gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1787
Score = 82.0 bits (201), Expect = 8e-14
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P + +V+NP KLDP+T+S +FIGY ERSKGYRFYCP + T+ VE+R+A FLE+++I G
Sbjct: 570 PAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRG 629
Query: 83 S 81
S
Sbjct: 630 S 630
>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
Length = 1405
Score = 82.0 bits (201), Expect = 8e-14
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P + +V+NP KLDP+T+S +FIGY ERSKGYRFYCP + T+ VE+R+A FLE+++I G
Sbjct: 695 PAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRG 754
Query: 83 S 81
S
Sbjct: 755 S 755
>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
Length = 1405
Score = 82.0 bits (201), Expect = 8e-14
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = -3
Query: 263 PFKVRVYNPQEKKLDPRTISRYFIGYAERSKGYRFYCPYNSTRIVESRNAKFLENDLISG 84
P + +V+NP KLDP+T+S +FIGY ERSKGYRFYCP + T+ VE+R+A FLE+++I G
Sbjct: 695 PAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRG 754
Query: 83 S 81
S
Sbjct: 755 S 755