BLASTX nr result
ID: Cocculus23_contig00016628
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00016628
(1365 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor... 540 e-151
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [... 533 e-149
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun... 532 e-148
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 522 e-145
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr... 522 e-145
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 521 e-145
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob... 521 e-145
ref|XP_002304926.2| pseudouridine synthase family protein [Popul... 520 e-145
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [... 509 e-142
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl... 508 e-141
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor... 508 e-141
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl... 506 e-140
ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phas... 501 e-139
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor... 500 e-139
ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chl... 499 e-138
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl... 499 e-138
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor... 499 e-138
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 498 e-138
gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus... 496 e-138
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor... 494 e-137
>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
gi|302144082|emb|CBI23187.3| unnamed protein product
[Vitis vinifera]
Length = 472
Score = 540 bits (1390), Expect = e-151
Identities = 255/348 (73%), Positives = 294/348 (84%), Gaps = 20/348 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCPEPPP+ATPEQ+ +FKEVTAPSVL+KR S+KGKTIREAQKTFRIT V
Sbjct: 124 LIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDV 183
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
NEFVEAG YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 184 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 243
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PL+TTHQIDNCTEGCVVLAR+KEYCSVFH KIREKKVKKLY AL+ AP
Sbjct: 244 ATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAP 303
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+GI+T YMRPVNIAPRL+S+DF++GW+LC+LEVL CKEV WPS L+EE+Y +++ GWP
Sbjct: 304 MPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWP 363
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
K A++C+INLLTGRTHQ+R QLAACGAPIVGDSMY+PA +AE T+PGLNPFG+++K+Y
Sbjct: 364 LKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKY 423
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWW 986
T+++DR A+ EWIAQHGKEP V IGLQACQISWDDG+HFYKAGSPWW
Sbjct: 424 TTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471
>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 476
Score = 533 bits (1372), Expect = e-149
Identities = 250/350 (71%), Positives = 291/350 (83%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LI FGAV+YALVCP PP TATPEQI +F++ TAPSVL+KRSS+KGKT+REAQKTFRITHV
Sbjct: 124 LIDFGAVHYALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHV 183
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++++EAG YVVLDKPAGTSVGGT DNIEESC
Sbjct: 184 DQYLEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESC 243
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PLKTTHQIDNCTEGCVVLARSKEYCSVFH KIREKKVKKLYLAL+ +P
Sbjct: 244 ATFATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASP 303
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+G+I +YMRPVNIAPRL+S++FV GWHLC+LEVL C++V WP A +EE+YSV++CGWP
Sbjct: 304 VPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWP 363
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC+INLLTGRTHQ+R QLAA GAP+VGDSMY+PA +AE NPGLNPFG+HRKQY
Sbjct: 364 SKDFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQY 423
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
T++ D S A+ EW+AQHGKEP V IGLQAC+ISWD+G+H YKAGSPWWRC
Sbjct: 424 TNESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWRC 473
>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
gi|462409392|gb|EMJ14726.1| hypothetical protein
PRUPE_ppa020640mg [Prunus persica]
Length = 477
Score = 532 bits (1370), Expect = e-148
Identities = 248/350 (70%), Positives = 293/350 (83%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PPPTATPEQ+ +FKEVTAPSVL+ R+S+KGKT+REAQKTFRITH
Sbjct: 127 LIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHA 186
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+EFVEAG +VVLDKPAGT+VGGTTDNIEESC
Sbjct: 187 DEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESC 246
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PL TTHQIDNCTEGCVVLAR+KEYCSVFH KIREKKVKKLYLAL+ AP
Sbjct: 247 ATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 306
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P GIIT YMRP+N+APRL+S+DF+E W LC+LEV+ CKE+ WP+A+VEE+Y V++CGWP
Sbjct: 307 VPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWP 366
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC+INLLTGRTHQVR QLAACGAPIVGDSMY+PA +AE +PGLNPFG+++K Y
Sbjct: 367 SKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHY 426
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
T+++D+ A+ EWIA+HGKEP+V IGLQACQISWDDG+H ++A +PWWRC
Sbjct: 427 TTENDKETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWRC 476
>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551677|gb|ESR62306.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 522 bits (1345), Expect = e-145
Identities = 247/350 (70%), Positives = 290/350 (82%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PP TATPEQ+ +FKEVT PSVL KRSS+KGKT+REAQKTFRITHV
Sbjct: 130 LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 189
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++ VEAG +VVLDKPAGTSVGGTTDNIEESC
Sbjct: 190 DQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 249
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFASRALGLT PL+TTHQIDNCTEGCVVLAR++EYCS+FHRKIREKKVKKLYLAL+ AP
Sbjct: 250 ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAP 309
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP+GI+T YMRP+NIAPRL+S+DF++GW+LC+LEV+ CK+V WP A V + YS+++CGWP
Sbjct: 310 LPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 369
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
S+ AYEC+I LLTGRTHQVR QLAACGAPIVGDSMY+PA +A+ ++PGLNPFG+ +K+Y
Sbjct: 370 SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 429
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
SDDD+ A+ EWI+QHGKEPSV IGLQAC ISWDDG+ Y+A SPWWRC
Sbjct: 430 ASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWRC 479
>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551674|gb|ESR62303.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 392
Score = 522 bits (1345), Expect = e-145
Identities = 247/350 (70%), Positives = 290/350 (82%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PP TATPEQ+ +FKEVT PSVL KRSS+KGKT+REAQKTFRITHV
Sbjct: 35 LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 94
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++ VEAG +VVLDKPAGTSVGGTTDNIEESC
Sbjct: 95 DQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 154
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFASRALGLT PL+TTHQIDNCTEGCVVLAR++EYCS+FHRKIREKKVKKLYLAL+ AP
Sbjct: 155 ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAP 214
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP+GI+T YMRP+NIAPRL+S+DF++GW+LC+LEV+ CK+V WP A V + YS+++CGWP
Sbjct: 215 LPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 274
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
S+ AYEC+I LLTGRTHQVR QLAACGAPIVGDSMY+PA +A+ ++PGLNPFG+ +K+Y
Sbjct: 275 SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 334
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
SDDD+ A+ EWI+QHGKEPSV IGLQAC ISWDDG+ Y+A SPWWRC
Sbjct: 335 ASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWRC 384
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 487
Score = 521 bits (1343), Expect = e-145
Identities = 248/350 (70%), Positives = 289/350 (82%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PP TATPEQ+ +FKEVT PSVL KRSS+KGKT+REAQKTFRITHV
Sbjct: 130 LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 189
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++ VEAG +VVLDKPAGTSVGGTTDNIEESC
Sbjct: 190 DQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 249
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFASRALGLT PL+TTHQIDNCTEGCVVLAR++EYCS+FHRKIREKKVKKLYLAL+TAP
Sbjct: 250 ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAP 309
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP+GI+T YMRP+NIAPRLVS+DF+ GW+LC+LEV+ CK+V WP A V + YS+++CGWP
Sbjct: 310 LPVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 369
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
S+ AYEC+I LLTGRTHQVR QLAACGAPIVGDSMY+PA +A+ ++PGLNPFG+ +K+Y
Sbjct: 370 SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 429
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
SDDD+ A+ EWI+QHG EPSV IGLQAC ISWDDG+ Y+A SPWWRC
Sbjct: 430 ASDDDKEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWRC 479
>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508781387|gb|EOY28643.1| Pseudouridine synthase family
protein [Theobroma cacao]
Length = 491
Score = 521 bits (1341), Expect = e-145
Identities = 248/349 (71%), Positives = 290/349 (83%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PPP+ATPEQI IFKEVTAPSVL KR+S++GKT+REAQKTFRITHV
Sbjct: 140 LIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHV 199
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++FVEAG YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 200 DQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESC 259
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALG + PLKTTHQIDNCTEGCVVLAR+KEYCSVFH KIREKKVKKLYLAL+ AP
Sbjct: 260 ATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAP 319
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP+G+IT YMRP+N+APRLVS+DF++GW+LC+LEV+ CK+V WP +++E Y +++ GWP
Sbjct: 320 LPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGWP 379
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
K AYEC+INLLTGRTHQVR QLAACGAPI+GDSMY+P +AE NPGLNPFG+++K +
Sbjct: 380 LKDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKYKK-H 438
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
TS++D+ AI EWI+Q GKEPSV IGLQACQISWDDG+HFYKA SPWWR
Sbjct: 439 TSENDKEIAITEWISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWR 487
>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
gi|550340110|gb|EEE85437.2| pseudouridine synthase family
protein [Populus trichocarpa]
Length = 470
Score = 520 bits (1338), Expect = e-145
Identities = 240/350 (68%), Positives = 291/350 (83%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAV+YALVCP+PP TATPEQI +F+EVTAPSVL+KR+S+KGKT+REAQKTFRITHV
Sbjct: 118 LIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHV 177
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++F+EAG +VVLDKPAGTSVGGTTDNIEESC
Sbjct: 178 DQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESC 237
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PL+TTHQIDNCTEGCVVLAR++E CSVFH KIREK VKKLY+AL+ +P
Sbjct: 238 ATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASP 297
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+G++ YMRP+N+APRLVS++F++GWHLC+LEV+ CK V WP A++EE+Y V +CGWP
Sbjct: 298 VPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWP 357
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC+INLLTGRTHQ+R QLAA GAP+VGDSMY+PA +AE +PG NPFG+++KQY
Sbjct: 358 SKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQY 417
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
TS+DD++ A+EEW+ HGKEP+V IGLQACQISWDDG+H Y AGSPWWRC
Sbjct: 418 TSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWRC 467
>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 395
Score = 509 bits (1312), Expect = e-142
Identities = 235/349 (67%), Positives = 283/349 (81%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAV+YALVCP+PPPTATPEQI +F+E TAPSVL+KR+S+KGKT+REAQKTFR++ V
Sbjct: 47 LIHFGAVHYALVCPQPPPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSV 106
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++F+E G YVVLDKPAGTSVGGTT+NIEE+C
Sbjct: 107 HQFLEVGTYLRVYVHPRRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETC 166
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PLKTTHQIDNCTEGCVVLAR+ EYC VFH KIRE KVKKLYLAL+ P
Sbjct: 167 ATFATRALGLTIPLKTTHQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACP 226
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+G+IT YMRP NI PRLVS++F+EGW+LC+LEVL C++V WP + EE+YSV++CGWP
Sbjct: 227 VPVGVITHYMRPGNIPPRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWP 286
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC+INLLTGRTHQ+R QLAACGAP+VGDSMY+PA +AE NPG+NPFG+H+KQY
Sbjct: 287 SKDFAYECKINLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQY 346
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
T ++D S + EW+ +HGKEPS+ IGLQAC+ISW D +H YKAG PWWR
Sbjct: 347 TGENDESMGVAEWVERHGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395
>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Glycine max]
Length = 478
Score = 508 bits (1309), Expect = e-141
Identities = 231/350 (66%), Positives = 286/350 (81%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LI FGAVYYALVCP+PPP AT EQI +FKEVT PSVL+KR+S+KGKT+REAQKTFR+THV
Sbjct: 129 LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 188
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++FVE G YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 189 DQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESC 248
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALG+T PL TTHQIDNCTEGCVVLAR+K+YCS+FH KIREKKVKKLYLAL+ +P
Sbjct: 249 ATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASP 308
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP GIIT YMRP+N+APRL+S+DF++GWHLC+LEVL C+++ WP+ ++++Y V++CGWP
Sbjct: 309 LPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWP 368
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
S+ AYEC+INLLTG+THQ+R Q AA AP++GDSMY+PA +A+ +NPGLNPFG+++K +
Sbjct: 369 SQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDF 428
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
+S+ ++ A+ W+AQHGKEPSV IGLQACQISWDD +HFY+AG PWWRC
Sbjct: 429 SSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWRC 478
>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 477
Score = 508 bits (1308), Expect = e-141
Identities = 235/349 (67%), Positives = 283/349 (81%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PPPTATPEQ+ ++KEVTAPSVL+KR S+KGKT+REAQKTFRITH
Sbjct: 127 LIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHA 186
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+++VE G +VVLDKPAGT+VGGTTDNIEESC
Sbjct: 187 DQYVEDGTYLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESC 246
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATF SRALGL+ PL TTHQIDNCTEGCVVLAR+K+YCSVFH KIREKKVKKLYLAL+ AP
Sbjct: 247 ATFTSRALGLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAP 306
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+PLG IT YMRP+N+APRL+S+D +E W LC+LEV+ CK+V WPS+++EE+Y V++CGWP
Sbjct: 307 VPLGTITHYMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWP 366
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC+INLLTG+THQ+R QLAACG P+VGDSMY+PA +AE NP LNPFG+H+K Y
Sbjct: 367 SKDYAYECKINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHY 426
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
++D A+ EW+A+HGKEP V IGLQACQISWDDG+H ++A +PWWR
Sbjct: 427 AGENDEEIAVTEWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475
>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Glycine max]
Length = 478
Score = 506 bits (1302), Expect = e-140
Identities = 232/350 (66%), Positives = 283/350 (80%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LI FGAVYYALVCP+PPP AT EQI +FKEVT PSVL+KR+S+KGKT+REAQKTFR+THV
Sbjct: 129 LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 188
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++FVE G YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 189 DQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESC 248
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALG+T PL TTHQIDNCTEGCVVLAR+KEYCSVFH KIREKKVKK YLAL+ P
Sbjct: 249 ATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFP 308
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP GIIT YMRP+++APRL+S+DF++GWHLC+LEVL C++V WP+ ++++Y +++CGWP
Sbjct: 309 LPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWP 368
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
S+ AYEC+INLLTG+THQ+R Q AA AP++GDSMY+PA +A +NPGLNPFG+++K +
Sbjct: 369 SQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDF 428
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
+S+ ++ A+ WIAQHGKEPSV IGLQACQISWDD +HFY+A SPWWRC
Sbjct: 429 SSESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWRC 478
>ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
gi|561020966|gb|ESW19737.1| hypothetical protein
PHAVU_006G151200g [Phaseolus vulgaris]
Length = 478
Score = 501 bits (1290), Expect = e-139
Identities = 229/350 (65%), Positives = 283/350 (80%), Gaps = 20/350 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LI FGAVYYALVCP+PPP+AT EQI +FKEVT PSVL++R+S+KGKT+REAQKTFR+TH
Sbjct: 129 LIQFGAVYYALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHA 188
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
++FVE G YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 189 DQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEESC 248
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PL TTHQIDNCTEGCVVLAR+KEYCSVFH KIREKKVKKLYLAL+++P
Sbjct: 249 ATFATRALGLTAPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALASSP 308
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP GIIT YMRP+N+APRL+S+DF++GW +C+LE+ C++V WP+ ++++Y V++CGWP
Sbjct: 309 LPTGIITHYMRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCGWP 368
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
+ AYEC+INLLTGRTHQ+R Q AAC AP+VGDSMY+PA + + +NPGLNPFG++++ +
Sbjct: 369 YQDFAYECKINLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYKRDF 428
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWRC 992
+S+ ++ A+ WIAQHGKEP V IGLQACQISWDD HFY++GSPWWRC
Sbjct: 429 SSESEKETAVVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWRC 478
>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
sativus]
Length = 475
Score = 500 bits (1288), Expect = e-139
Identities = 238/349 (68%), Positives = 278/349 (79%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PP TATPEQI +FK+ T PS L+ R S+KGKT+REAQKTFRITHV
Sbjct: 123 LIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHV 182
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+EFVE G YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 183 DEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 242
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PL TTHQIDNCTEGCV+ AR+KEYCS+FH KIREKKV KLYLALS AP
Sbjct: 243 ATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAP 302
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+GIIT YMRP+NIAPRLVSKD ++GW +C+LEVL C+EVSWP A +E +Y V++CGWP
Sbjct: 303 VPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWP 362
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC INLLTGRTHQ+R QLA CGAP+VGDSMY+PAV+AE +PGLNPFG+ +K+Y
Sbjct: 363 SKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEY 422
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
T+++D+ A+ EW A HGKEP+V IGLQA +ISWD +H Y AG+PWWR
Sbjct: 423 TNEEDKETAVAEWSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471
>ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X3 [Solanum tuberosum]
Length = 440
Score = 499 bits (1284), Expect = e-138
Identities = 236/349 (67%), Positives = 283/349 (81%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LI FGAVYYALVCP+PPPTA+PEQI +++EVT PS+L++R+S+KGKT+REAQKTF+IT
Sbjct: 92 LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRA 151
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+E VEAG YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 152 DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESC 211
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALG + PL TTHQIDNCTEGCVVLARSKEYCSVFH KIREKKVKKLYLAL+ AP
Sbjct: 212 ATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAP 271
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+GI+T YMRP+N+APRLVS+DFV+GW LC+LEVL CK+V WPS+ ++ Y++++CGW
Sbjct: 272 VPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWA 331
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
K AYEC+INLLTGRTHQ+R QLAAC AP+VGDSMY+PA +AE PG NPFG+++K Y
Sbjct: 332 LKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLY 391
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
++++D+S AI+EWIAQHGKEPSV +GLQACQISWDDGQH Y A PWWR
Sbjct: 392 SNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 440
>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 483
Score = 499 bits (1284), Expect = e-138
Identities = 236/349 (67%), Positives = 283/349 (81%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LI FGAVYYALVCP+PPPTA+PEQI +++EVT PS+L++R+S+KGKT+REAQKTF+IT
Sbjct: 135 LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRA 194
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+E VEAG YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 195 DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESC 254
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALG + PL TTHQIDNCTEGCVVLARSKEYCSVFH KIREKKVKKLYLAL+ AP
Sbjct: 255 ATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAP 314
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+GI+T YMRP+N+APRLVS+DFV+GW LC+LEVL CK+V WPS+ ++ Y++++CGW
Sbjct: 315 VPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWA 374
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
K AYEC+INLLTGRTHQ+R QLAAC AP+VGDSMY+PA +AE PG NPFG+++K Y
Sbjct: 375 LKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLY 434
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
++++D+S AI+EWIAQHGKEPSV +GLQACQISWDDGQH Y A PWWR
Sbjct: 435 SNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483
>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
lycopersicum]
Length = 448
Score = 499 bits (1284), Expect = e-138
Identities = 236/349 (67%), Positives = 283/349 (81%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LI FGAVYYALVCP+PPPTA+PEQI +++EVT PSVL+KR+S+KGKT+REAQKTF+IT
Sbjct: 100 LIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRA 159
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+E VEAG YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 160 DEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESC 219
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALG + PL TTHQIDNCTEGCVVLARSKEYCSVFH KIREKKV+KLYLAL+ AP
Sbjct: 220 ATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVRKLYLALAAAP 279
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+GI+T YMRP+N+APRLVS+DFV+GW LC+LEVL C++V WPS+ ++ Y++++CGW
Sbjct: 280 VPIGILTHYMRPINMAPRLVSRDFVKGWLLCQLEVLECQKVPWPSSEIQRTYNLEDCGWA 339
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
K AYEC+INLLTGRTHQ+R QLAAC AP+VGDSMY+PA +AE PG NPFG+++K Y
Sbjct: 340 LKDYAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLY 399
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
++++D+S AI+EWIAQHGKEPSV +GLQACQISWDDGQH Y A PWWR
Sbjct: 400 SNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARMPWWR 448
>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
chloroplastic-like [Cucumis sativus]
Length = 475
Score = 498 bits (1283), Expect = e-138
Identities = 237/349 (67%), Positives = 276/349 (79%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PP TATPEQI +FK T PS L+ R S+KGKT+REAQKTFRITHV
Sbjct: 123 LIHFGAVYYALVCPQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHV 182
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+EFVE G YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 183 DEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 242
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
ATFA+RALGLT PL TTHQIDNCTEGCV+ AR+KEYCS+FH KIREKKV KLYLALS AP
Sbjct: 243 ATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAP 302
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+P+GIIT YMRP+NIAPRLVSKD ++GW +C+LEVL C+EVSWP A E +Y V++CGWP
Sbjct: 303 VPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWP 362
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC INLLTGRTHQ+R QLA CGAP+VGDSMY+PAV+AE +PGLNPFG+ +K+Y
Sbjct: 363 SKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEY 422
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
T+++D+ ++ EW A HGKEP+V IGLQA +ISWD +H Y AG+PWWR
Sbjct: 423 TNEEDKETSVAEWSALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 471
>gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus guttatus]
Length = 483
Score = 496 bits (1278), Expect = e-138
Identities = 238/351 (67%), Positives = 278/351 (79%), Gaps = 22/351 (6%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAV+YALVCP+PPPTATPEQI FKE T PS+L+KRSS+KGKT REAQKTFRI+
Sbjct: 133 LIHFGAVFYALVCPDPPPTATPEQINFFKEYTDPSLLRKRSSIKGKTFREAQKTFRISRT 192
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+EFVE G YVVLDKPAGTSVGGTTDNIEESC
Sbjct: 193 DEFVETGTYLRVHVHPKRFPRCYETDWRSRVIAVAESYVVLDKPAGTSVGGTTDNIEESC 252
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
TF +RALGL PL TTHQIDNCTEGCVVLAR+KEYCSVFH KIREKKVKKLYLAL+ AP
Sbjct: 253 VTFTTRALGLEAPLITTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 312
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
+ +G+IT YMRPVNIAPRLVS+D V GWHLC+LEVL C+++ WPS++ EE+ V++CGWP
Sbjct: 313 VSIGVITHYMRPVNIAPRLVSEDLVNGWHLCQLEVLECRKIPWPSSIAEEKNRVEDCGWP 372
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK AYEC++NLLTGRTHQ+R Q AACGAP+VGDSMY+PA +AE P LNPFG+++K+Y
Sbjct: 373 SKDFAYECKVNLLTGRTHQIRAQFAACGAPLVGDSMYMPAAIAEVDRPELNPFGKNKKEY 432
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISW--DDGQHFYKAGSPWWR 989
SDD ++ A+EEWIA+HGKEP V IGLQAC+ISW D+ QH Y+AG PWWR
Sbjct: 433 ASDDIKAVAVEEWIARHGKEPIVAIGLQACKISWDSDEEQHSYEAGRPWWR 483
>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
sativus]
Length = 475
Score = 494 bits (1273), Expect = e-137
Identities = 233/349 (66%), Positives = 278/349 (79%), Gaps = 20/349 (5%)
Frame = +3
Query: 3 LIHFGAVYYALVCPEPPPTATPEQIWIFKEVTAPSVLQKRSSLKGKTIREAQKTFRITHV 182
LIHFGAVYYALVCP+PPPTA+ E+I +FK+ T PS L R S+KGKT+REAQKTFRITH+
Sbjct: 123 LIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHI 182
Query: 183 NEFVEAGXXXXXXXXXX--------------------YVVLDKPAGTSVGGTTDNIEESC 302
+EFVE G YVVLDKPAGTSVGGTT+NIEE+C
Sbjct: 183 DEFVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETC 242
Query: 303 ATFASRALGLTEPLKTTHQIDNCTEGCVVLARSKEYCSVFHRKIREKKVKKLYLALSTAP 482
TFA+RALGLT PL TTHQIDNCTEGCV+LAR+KEYCS+FHRKIREKKV KLYLAL P
Sbjct: 243 VTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVP 302
Query: 483 LPLGIITSYMRPVNIAPRLVSKDFVEGWHLCKLEVLGCKEVSWPSALVEEQYSVDNCGWP 662
LP GI+T YMRP N+APRLVS+D ++GW+LC+LEVL C+EVSWP A +E +YS+++CGWP
Sbjct: 303 LPKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWP 362
Query: 663 SKCVAYECEINLLTGRTHQVRTQLAACGAPIVGDSMYIPAVMAEETNPGLNPFGEHRKQY 842
SK A+EC+INLLTGRTHQ+R QLA CGAP+VGDSMY+PAV+AE NPGLNPFG+ +K+Y
Sbjct: 363 SKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMANPGLNPFGKCKKEY 422
Query: 843 TSDDDRSKAIEEWIAQHGKEPSVVIGLQACQISWDDGQHFYKAGSPWWR 989
TS++D+ A+ EWIA HGKEP+V IGLQA +ISWD +H Y AG+PWWR
Sbjct: 423 TSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471