BLASTX nr result

ID: Cocculus23_contig00016363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00016363
         (233 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313658.2| hypothetical protein POPTR_0009s14970g [Popu...    59   7e-07
ref|XP_002267642.1| PREDICTED: uncharacterized protein LOC100243...    57   3e-06

>ref|XP_002313658.2| hypothetical protein POPTR_0009s14970g [Populus trichocarpa]
           gi|550331757|gb|EEE87613.2| hypothetical protein
           POPTR_0009s14970g [Populus trichocarpa]
          Length = 188

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/43 (74%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +1

Query: 106 KIKSSGSI-NYSESVLAMEDKDEEMSRSALNSFRAKEEEIEKK 231
           K+KSSG I NY+ES L  ++KDEEMSRSAL  FRAKEEEIEKK
Sbjct: 18  KLKSSGIISNYNESSLLRDEKDEEMSRSALAMFRAKEEEIEKK 60


>ref|XP_002267642.1| PREDICTED: uncharacterized protein LOC100243168 [Vitis vinifera]
           gi|297734837|emb|CBI17071.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/44 (65%), Positives = 38/44 (86%)
 Frame = +1

Query: 100 VHKIKSSGSINYSESVLAMEDKDEEMSRSALNSFRAKEEEIEKK 231
           + K+K+SG I+Y+ S L  +DKDEEMSRSAL++FRAKEEEIE+K
Sbjct: 15  MQKVKNSGVISYNGSPLT-DDKDEEMSRSALSAFRAKEEEIERK 57


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