BLASTX nr result
ID: Cocculus23_contig00016336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00016336
(561 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ... 86 8e-15
ref|XP_003606875.1| Helicase-like protein [Medicago truncatula] ... 86 8e-15
ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [S... 86 8e-15
ref|XP_002464702.1| hypothetical protein SORBIDRAFT_01g024321 [S... 85 1e-14
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S... 85 1e-14
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S... 85 1e-14
ref|XP_002437537.1| hypothetical protein SORBIDRAFT_10g028975 [S... 84 2e-14
ref|XP_003614418.1| DNA repair and recombination protein PIF1 [M... 84 3e-14
ref|XP_002455487.1| hypothetical protein SORBIDRAFT_03g011730 [S... 84 3e-14
ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [S... 83 4e-14
ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [S... 83 4e-14
emb|CDJ84245.1| Protein of unknown function DUF889 domain contai... 83 6e-14
ref|XP_003601370.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 83 6e-14
ref|XP_002460870.1| hypothetical protein SORBIDRAFT_02g036600 [S... 83 6e-14
ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [S... 83 6e-14
gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata] 82 7e-14
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S... 82 9e-14
ref|XP_002460255.1| hypothetical protein SORBIDRAFT_02g025546 [S... 82 9e-14
gb|ABA97607.1| hypothetical protein LOC_Os12g23030 [Oryza sativa... 82 1e-13
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon... 82 1e-13
>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
gi|355509000|gb|AES90142.1| Helicase-like protein
[Medicago truncatula]
Length = 1651
Score = 85.5 bits (210), Expect = 8e-15
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNRTK 377
+AMTINK+QGQTLDSVG+YLP VFSHGQLYVA SR R +KIL+ LE+K + T
Sbjct: 1581 YAMTINKSQGQTLDSVGLYLPRSVFSHGQLYVAFSRVRTKAGLKILIH-DLEKKPLSNTT 1639
Query: 376 NIVYKEL 356
N+VYKE+
Sbjct: 1640 NVVYKEV 1646
>ref|XP_003606875.1| Helicase-like protein [Medicago truncatula]
gi|355507930|gb|AES89072.1| Helicase-like protein
[Medicago truncatula]
Length = 1674
Score = 85.5 bits (210), Expect = 8e-15
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNRTK 377
+AMTINK+QGQTLDSVG+YLP VFSHGQLYVA SR R +KIL+ LE+K + T
Sbjct: 1604 YAMTINKSQGQTLDSVGLYLPRSVFSHGQLYVAFSRVRTKAGLKILIH-DLEKKPLSNTT 1662
Query: 376 NIVYKEL 356
N+VYKE+
Sbjct: 1663 NVVYKEV 1669
>ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [Sorghum bicolor]
gi|241937278|gb|EES10423.1| hypothetical protein
SORBIDRAFT_06g001660 [Sorghum bicolor]
Length = 1484
Score = 85.5 bits (210), Expect = 8e-15
Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 8/78 (10%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQTL +VG+YLP+ VFSHGQLYVALSRA ++++IL+ P +R
Sbjct: 1407 FAMTINKAQGQTLPNVGVYLPEPVFSHGQLYVALSRATARSNIRILVVPPSDRNDKKNKT 1466
Query: 382 ------TKNIVYKELLAL 347
TKNIVYKE+L L
Sbjct: 1467 KINGIYTKNIVYKEVLTL 1484
>ref|XP_002464702.1| hypothetical protein SORBIDRAFT_01g024321 [Sorghum bicolor]
gi|241918556|gb|EER91700.1| hypothetical protein
SORBIDRAFT_01g024321 [Sorghum bicolor]
Length = 88
Score = 85.1 bits (209), Expect = 1e-14
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQTL +VG+YLP+ VFSHGQLYVALSRA ++++IL+ P +R +
Sbjct: 12 FAMTINKAQGQTLPNVGVYLPEPVFSHGQLYVALSRATARSNIRILVVPPCDRNDKKKKT 71
Query: 382 ------TKNIVYKELL 353
TKNIVYKE+L
Sbjct: 72 KINGIYTKNIVYKEVL 87
>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
gi|241944914|gb|EES18059.1| hypothetical protein
SORBIDRAFT_09g017230 [Sorghum bicolor]
Length = 512
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERK-CFNRT 380
FAMTINKAQGQT+ +VGIYLP+ VFSHGQLYVALSR ++ ++L KP+ E N T
Sbjct: 442 FAMTINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRSTTRVLAKPNQELDGTGNTT 501
Query: 379 KNIVYKELL 353
KNIVYK++L
Sbjct: 502 KNIVYKDIL 510
>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
gi|241937646|gb|EES10791.1| hypothetical protein
SORBIDRAFT_06g016400 [Sorghum bicolor]
Length = 998
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERK-CFNRT 380
FAMTINKAQGQT+ +VGIYLP+ VFSHGQLYVALSR ++ ++L KP+ E N T
Sbjct: 928 FAMTINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRSTTRVLAKPNQELDGTGNTT 987
Query: 379 KNIVYKELL 353
KNIVYK++L
Sbjct: 988 KNIVYKDIL 996
>ref|XP_002437537.1| hypothetical protein SORBIDRAFT_10g028975 [Sorghum bicolor]
gi|241915760|gb|EER88904.1| hypothetical protein
SORBIDRAFT_10g028975 [Sorghum bicolor]
Length = 103
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/76 (56%), Positives = 57/76 (75%), Gaps = 8/76 (10%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQT+ ++G+YLP+ VFS+GQLYVALSRA +++KIL P +++K R
Sbjct: 27 FAMTINKAQGQTIPNIGVYLPESVFSYGQLYVALSRATTRSNIKILTIPPIDKKNTKRET 86
Query: 382 ------TKNIVYKELL 353
T+NIVYKE+L
Sbjct: 87 KINGKYTRNIVYKEVL 102
>ref|XP_003614418.1| DNA repair and recombination protein PIF1 [Medicago truncatula]
gi|355515753|gb|AES97376.1| DNA repair and recombination
protein PIF1 [Medicago truncatula]
Length = 99
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/68 (61%), Positives = 50/68 (73%)
Frame = -3
Query: 559 CFAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNRT 380
CFAMTINK+QGQ+L VGIYLP VFSHGQLYVA+SR S+KILL + C + T
Sbjct: 29 CFAMTINKSQGQSLKQVGIYLPQSVFSHGQLYVAISRVTSRDSLKILLTDN-NGDCISTT 87
Query: 379 KNIVYKEL 356
N+VYKE+
Sbjct: 88 SNVVYKEI 95
>ref|XP_002455487.1| hypothetical protein SORBIDRAFT_03g011730 [Sorghum bicolor]
gi|241927462|gb|EES00607.1| hypothetical protein
SORBIDRAFT_03g011730 [Sorghum bicolor]
Length = 754
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = -3
Query: 559 CFAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNRT 380
C+ MTINK+QGQTL +VG+YL VFSHGQLYVA+SR +KIL++ + + C N T
Sbjct: 680 CYGMTINKSQGQTLVAVGVYLKRPVFSHGQLYVAVSRVTCKQGLKILIEDA-QGNCTNET 738
Query: 379 KNIVYKELLA 350
KNIVYKE+LA
Sbjct: 739 KNIVYKEVLA 748
>ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [Sorghum bicolor]
gi|241940954|gb|EES14099.1| hypothetical protein
SORBIDRAFT_07g024540 [Sorghum bicolor]
Length = 1185
Score = 83.2 bits (204), Expect = 4e-14
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 11/79 (13%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQT+ +VG+YLP+ VFSHGQLYVALSRA +++KIL+ P E+
Sbjct: 1105 FAMTINKAQGQTIPTVGVYLPEPVFSHGQLYVALSRATARSNIKILVVPPDEKDVTKEKG 1164
Query: 382 ---------TKNIVYKELL 353
TKNIVYKE+L
Sbjct: 1165 KKKLTKDIFTKNIVYKEVL 1183
>ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [Sorghum bicolor]
gi|241933195|gb|EES06340.1| hypothetical protein
SORBIDRAFT_04g004660 [Sorghum bicolor]
Length = 1145
Score = 83.2 bits (204), Expect = 4e-14
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 6/74 (8%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQTL +VG+YLP+ VFSHGQLYVALSRA ++++IL P ++ +
Sbjct: 1070 FAMTINKAQGQTLPNVGVYLPEPVFSHGQLYVALSRATARSNIRILAVPPSDKNDKKQKN 1129
Query: 382 ----TKNIVYKELL 353
TKNIVYKE+L
Sbjct: 1130 NGTFTKNIVYKEVL 1143
>emb|CDJ84245.1| Protein of unknown function DUF889 domain containing protein
[Haemonchus contortus]
Length = 1720
Score = 82.8 bits (203), Expect = 6e-14
Identities = 46/68 (67%), Positives = 51/68 (75%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNRTK 377
FA TINKAQGQTL VG+YLPD VFSHGQLYVALSR+R A SVK+ L PS + K
Sbjct: 1660 FATTINKAQGQTLSKVGVYLPDHVFSHGQLYVALSRSRNADSVKV-LSPS------TKIK 1712
Query: 376 NIVYKELL 353
NIVYK +L
Sbjct: 1713 NIVYKSIL 1720
>ref|XP_003601370.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355490418|gb|AES71621.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 390
Score = 82.8 bits (203), Expect = 6e-14
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = -3
Query: 559 CFAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNRT 380
CFAMTINK+QGQ+L VG+YLP +FSHGQLYVA+SR + +KILL + C N T
Sbjct: 319 CFAMTINKSQGQSLKQVGVYLPQPMFSHGQLYVAISRVTSRSGLKILLTDD-DGACINTT 377
Query: 379 KNIVYKEL 356
N+VYKE+
Sbjct: 378 SNVVYKEV 385
>ref|XP_002460870.1| hypothetical protein SORBIDRAFT_02g036600 [Sorghum bicolor]
gi|241924247|gb|EER97391.1| hypothetical protein
SORBIDRAFT_02g036600 [Sorghum bicolor]
Length = 303
Score = 82.8 bits (203), Expect = 6e-14
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQTL +VG+YLP+ VFSHGQLYVALSRA ++ +IL+ P ++K +
Sbjct: 226 FAMTINKAQGQTLPNVGVYLPEPVFSHGQLYVALSRATARSNNRILVIPPSDKKDKKKTT 285
Query: 382 ------TKNIVYKELL 353
TKNIVYKE+L
Sbjct: 286 KTNGAYTKNIVYKEVL 301
>ref|XP_002436742.1| hypothetical protein SORBIDRAFT_10g007990 [Sorghum bicolor]
gi|241914965|gb|EER88109.1| hypothetical protein
SORBIDRAFT_10g007990 [Sorghum bicolor]
Length = 143
Score = 82.8 bits (203), Expect = 6e-14
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-T 380
FAMTINKAQGQT+ +VGIYLP+ VFSHGQLYVALSR + +IL KP+ E + T
Sbjct: 73 FAMTINKAQGQTIPNVGIYLPEHVFSHGQLYVALSRGVSRQTTRILSKPNKELDSTGKST 132
Query: 379 KNIVYKELL 353
KNIVYK++L
Sbjct: 133 KNIVYKDVL 141
>gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata]
Length = 1605
Score = 82.4 bits (202), Expect = 7e-14
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 6/74 (8%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQTL +VG+YLP+ VFSHGQLYVA+SRA ++++IL P ++ +
Sbjct: 1530 FAMTINKAQGQTLPNVGVYLPEPVFSHGQLYVAISRATARSNIRILAVPPSDKNDKKQKN 1589
Query: 382 ----TKNIVYKELL 353
TKNIVYKE+L
Sbjct: 1590 NGTFTKNIVYKEVL 1603
>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
gi|241946187|gb|EES19332.1| hypothetical protein
SORBIDRAFT_09g016160 [Sorghum bicolor]
Length = 1379
Score = 82.0 bits (201), Expect = 9e-14
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-T 380
FAMTINKAQGQT+ +VGIYLP+ VFSHGQLYVALSR + +IL KP+ E R T
Sbjct: 1310 FAMTINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRQTTRILSKPNKELDSTGRST 1369
Query: 379 KNIVYKELL 353
KNIV+K++L
Sbjct: 1370 KNIVWKDVL 1378
>ref|XP_002460255.1| hypothetical protein SORBIDRAFT_02g025546 [Sorghum bicolor]
gi|241923632|gb|EER96776.1| hypothetical protein
SORBIDRAFT_02g025546 [Sorghum bicolor]
Length = 101
Score = 82.0 bits (201), Expect = 9e-14
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 6/74 (8%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-- 383
FAMTINKAQGQTL +VG+YLP+ VFSHGQLYVALSR+ ++++IL P ++ +
Sbjct: 27 FAMTINKAQGQTLPNVGVYLPEPVFSHGQLYVALSRSTARSNIRILAVPPSDKNDKKQKN 86
Query: 382 ----TKNIVYKELL 353
TKNIVYKE+L
Sbjct: 87 NGTFTKNIVYKEVL 100
>gb|ABA97607.1| hypothetical protein LOC_Os12g23030 [Oryza sativa Japonica Group]
Length = 1005
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLERKCFNR-T 380
FAMTINK+QGQT+ +VGIYLP+ VFSHGQLYVALSR+ + +IL KP E + T
Sbjct: 935 FAMTINKSQGQTIPNVGIYLPEPVFSHGQLYVALSRSVSRLTTRILAKPKKEVDSTGKST 994
Query: 379 KNIVYKELL 353
KNIVYK++L
Sbjct: 995 KNIVYKDVL 1003
>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
Length = 1443
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 5/73 (6%)
Frame = -3
Query: 556 FAMTINKAQGQTLDSVGIYLPDLVFSHGQLYVALSRARIATSVKILLKPSLER--KCFNR 383
FAMTINKAQGQT+ +VG+YLPD VFSHGQLYVALSRA ++KIL S ++ + +R
Sbjct: 1369 FAMTINKAQGQTIPNVGVYLPDPVFSHGQLYVALSRATARMNIKILAVQSKDKSHRSMSR 1428
Query: 382 ---TKNIVYKELL 353
T+NIVY+E+L
Sbjct: 1429 GTYTRNIVYREVL 1441