BLASTX nr result

ID: Cocculus23_contig00016308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00016308
         (278 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006650476.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   1e-06
ref|XP_002464016.1| hypothetical protein SORBIDRAFT_01g010590 [S...    58   1e-06
ref|NP_001152536.1| ATP-dependent RNA helicase DDX23 [Zea mays] ...    58   1e-06
ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group] g...    58   1e-06
gb|ACN26564.1| unknown [Zea mays] gi|413933312|gb|AFW67863.1| pu...    58   2e-06
ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays] ...    58   2e-06
ref|XP_006849741.1| hypothetical protein AMTR_s00024p00248520 [A...    57   3e-06
ref|XP_006348179.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
ref|XP_002322111.2| DEAD box RNA helicase family protein [Populu...    57   3e-06
ref|XP_004982019.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
gb|EMS59667.1| DEAD-box ATP-dependent RNA helicase 21 [Triticum ...    57   3e-06
ref|XP_004232673.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    57   3e-06
ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
gb|ADP02213.1| putative DEAD-box ATP-dependent RNA helicase [Tri...    57   3e-06
ref|XP_003560754.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicag...    57   3e-06
dbj|BAK00777.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06
ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putativ...    57   3e-06
ref|XP_004507582.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   6e-06

>ref|XP_006650476.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like, partial
           [Oryza brachyantha]
          Length = 674

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 88  LEKMAEREREKELDAIKEQYLGSKKPKKRVI 118


>ref|XP_002464016.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
           gi|241917870|gb|EER91014.1| hypothetical protein
           SORBIDRAFT_01g010590 [Sorghum bicolor]
          Length = 750

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 164 LEKMAEREREKELDAIKEQYLGSKKPKKRVI 194


>ref|NP_001152536.1| ATP-dependent RNA helicase DDX23 [Zea mays]
           gi|195657271|gb|ACG48103.1| ATP-dependent RNA helicase
           DDX23 [Zea mays] gi|224030151|gb|ACN34151.1| unknown
           [Zea mays] gi|414872390|tpg|DAA50947.1| TPA: putative
           DEAD-box ATP-dependent RNA helicase family protein
           isoform 1 [Zea mays] gi|414872391|tpg|DAA50948.1| TPA:
           putative DEAD-box ATP-dependent RNA helicase family
           protein isoform 2 [Zea mays]
          Length = 758

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 172 LEKMAEREREKELDAIKEQYLGSKKPKKRVI 202


>ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
           gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 21
           gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase,
           putative [Oryza sativa Japonica Group]
           gi|108710689|gb|ABF98484.1| transposon protein,
           putative, CACTA, En/Spm sub-class, expressed [Oryza
           sativa Japonica Group] gi|108710690|gb|ABF98485.1|
           transposon protein, putative, CACTA, En/Spm sub-class,
           expressed [Oryza sativa Japonica Group]
           gi|108710691|gb|ABF98486.1| transposon protein,
           putative, CACTA, En/Spm sub-class, expressed [Oryza
           sativa Japonica Group] gi|113549509|dbj|BAF12952.1|
           Os03g0708600 [Oryza sativa Japonica Group]
           gi|125545447|gb|EAY91586.1| hypothetical protein
           OsI_13221 [Oryza sativa Indica Group]
           gi|125587655|gb|EAZ28319.1| hypothetical protein
           OsJ_12293 [Oryza sativa Japonica Group]
           gi|215697317|dbj|BAG91311.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 736

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 150 LEKMAEREREKELDAIKEQYLGSKKPKKRVI 180


>gb|ACN26564.1| unknown [Zea mays] gi|413933312|gb|AFW67863.1| putative DEAD-box
           ATP-dependent RNA helicase family protein [Zea mays]
          Length = 734

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 148 LEKIAEREREKELDAIKEQYLGSKKPKKRVI 178


>ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays]
           gi|195614524|gb|ACG29092.1| ATP-dependent RNA helicase
           DDX23 [Zea mays]
          Length = 736

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 150 LEKIAEREREKELDAIKEQYLGSKKPKKRVI 180


>ref|XP_006849741.1| hypothetical protein AMTR_s00024p00248520 [Amborella trichopoda]
           gi|548853316|gb|ERN11322.1| hypothetical protein
           AMTR_s00024p00248520 [Amborella trichopoda]
          Length = 676

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           +EK AEREREKEL++IK+QYLGTKKPKKRVI
Sbjct: 91  IEKQAEREREKELESIKEQYLGTKKPKKRVI 121


>ref|XP_006348179.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Solanum
           tuberosum]
          Length = 707

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           L+K AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 122 LDKLAEREREKELDAIKEQYLGSKKPKKRVI 152


>ref|XP_002322111.2| DEAD box RNA helicase family protein [Populus trichocarpa]
           gi|550321941|gb|EEF06238.2| DEAD box RNA helicase family
           protein [Populus trichocarpa]
          Length = 710

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           L+K AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 125 LDKLAEREREKELDAIKEQYLGSKKPKKRVI 155


>ref|XP_004982019.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Setaria
           italica]
          Length = 744

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 90  EKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           EK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 159 EKMAEREREKELDAIKEQYLGSKKPKKRVI 188


>gb|EMS59667.1| DEAD-box ATP-dependent RNA helicase 21 [Triticum urartu]
          Length = 656

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKEL+AIK+QYLG+KKPKKRVI
Sbjct: 70  LEKMAEREREKELEAIKEQYLGSKKPKKRVI 100


>ref|XP_004232673.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Solanum
           lycopersicum]
          Length = 711

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           L+K AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 126 LDKLAEREREKELDAIKEQYLGSKKPKKRVI 156


>ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           21-like [Cucumis sativus]
          Length = 715

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AERER+KELDAIK+QYLG+KKPKKRVI
Sbjct: 130 LEKLAERERDKELDAIKEQYLGSKKPKKRVI 160


>ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
           sativus]
          Length = 715

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AERER+KELDAIK+QYLG+KKPKKRVI
Sbjct: 130 LEKLAERERDKELDAIKEQYLGSKKPKKRVI 160


>gb|ADP02213.1| putative DEAD-box ATP-dependent RNA helicase [Triticum aestivum]
          Length = 742

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKEL+AIK+QYLG+KKPKKRVI
Sbjct: 156 LEKMAEREREKELEAIKEQYLGSKKPKKRVI 186


>ref|XP_003560754.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
           [Brachypodium distachyon]
           gi|357118015|ref|XP_003560755.1| PREDICTED: DEAD-box
           ATP-dependent RNA helicase 21-like isoform 2
           [Brachypodium distachyon]
          Length = 734

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKEL+AIK+QYLG+KKPKKRVI
Sbjct: 148 LEKMAEREREKELEAIKEQYLGSKKPKKRVI 178


>ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 781

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKELD+IK+QYLG+KKPKKRVI
Sbjct: 121 LEKLAEREREKELDSIKEQYLGSKKPKKRVI 151


>dbj|BAK00777.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 731

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKEL+AIK+QYLG+KKPKKRVI
Sbjct: 145 LEKMAEREREKELEAIKEQYLGSKKPKKRVI 175


>ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 714

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           +EK AEREREKELDAIK+QYLG+KKPKKRVI
Sbjct: 129 VEKVAEREREKELDAIKEQYLGSKKPKKRVI 159


>ref|XP_004507582.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cicer
           arietinum]
          Length = 694

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  LEKHAEREREKELDAIKDQYLGTKKPKKRVI 1
           LEK AEREREKEL+ IKDQYLG+KKPKKRVI
Sbjct: 109 LEKLAEREREKELELIKDQYLGSKKPKKRVI 139


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