BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00016267
         (818 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37506.3| unnamed protein product [Vitis vinifera]              269   1e-69
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   259   6e-67
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   243   8e-62
gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]     241   2e-61
ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcr...   241   2e-61
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   241   2e-61
ref|XP_007046443.1| Major facilitator superfamily protein isofor...   238   2e-60
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   234   2e-59
ref|XP_006467185.1| PREDICTED: RNA polymerase I-specific transcr...   234   4e-59
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   234   4e-59
ref|XP_004232589.1| PREDICTED: RNA polymerase I-specific transcr...   233   5e-59
ref|XP_006364840.1| PREDICTED: RNA polymerase I-specific transcr...   232   1e-58
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   229   9e-58
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   229   9e-58
ref|XP_002524432.1| transcription initiation factor ia, putative...   213   9e-53
ref|XP_007134114.1| hypothetical protein PHAVU_010G020100g [Phas...   210   6e-52
ref|XP_006450178.1| hypothetical protein CICLE_v10010838mg [Citr...   208   2e-51
ref|XP_006296428.1| hypothetical protein CARUB_v10025608mg [Caps...   200   5e-49
ref|XP_002881355.1| RNA polymerase I specific transcription init...   192   2e-46
gb|AAC16259.1| unknown protein [Arabidopsis thaliana]                 191   2e-46

>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  269 bits (687), Expect = 1e-69
 Identities = 144/223 (64%), Positives = 175/223 (78%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MGVELA+    F EME+ +FSDSE+V HVR AL+SV  GDSD Y+QLIGV++  +RLAPD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
           EVALLVT LKALS  V  ID+ HH +LLS+IFGMSLWNYGPDVMDAL+ELI++LAASSGN
Sbjct: 61  EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            +D  L MLVSNF+PP SLL  L QP    RK QVL RVHS   +IADLVPLAP  L  I
Sbjct: 121 YLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPI 180

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + +RMP+VF+KE +I+ YVENML+LE  ++ ELVG+ M+VA++
Sbjct: 181 VIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALM 223


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  259 bits (663), Expect = 6e-67
 Identities = 144/232 (62%), Positives = 174/232 (75%), Gaps = 9/232 (3%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MGVELA+    F EME+ +FSDSE+V HVR AL+SV  GDSD Y+QLIGV++  +RLAPD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
           EVALLVT LKALS  V  ID+ HH +LLS+IFGMSLWNYGPDVMDAL+ELI++LAASSGN
Sbjct: 61  EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            +D  L MLVSNF+PP SLL  L QP    RK QVL RVHS   +IADLVPLAP  L  I
Sbjct: 121 YLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPI 180

Query: 130 IPRRMPHVFSKEAM---------IVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + +RMP+VF+KE +         I  YVENML+LE  ++ ELVG+ M+VA++
Sbjct: 181 VIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGGAIRELVGNMMLVALM 232


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  243 bits (619), Expect = 8e-62
 Identities = 134/226 (59%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MGVEL   +    EMED + SD E+V HVR AL SV  GD+D+YNQL+ VM+ S RL PD
Sbjct: 1   MGVELPIDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
             ALL T LKALS  V +IDI HH +LL +IFGMS+WNY PDVMDAL  LI++LAAS+G 
Sbjct: 61  NRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDVMDALKGLIISLAASNGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VDSCL MLVSNF PP   L  L +P    RK QVL RVH+A  +I DLVPLAP  L  I
Sbjct: 121 YVDSCLTMLVSNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPTRLLPI 180

Query: 130 IPRRMPHVFSKE---AMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + +RMP V +K     MIV Y ENMLKLES+++GELV ST+++AVV
Sbjct: 181 VVQRMPTVHNKHERLKMIVVYTENMLKLESSAMGELVRSTLLMAVV 226


>gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
          Length = 616

 Score =  241 bits (616), Expect = 2e-61
 Identities = 130/223 (58%), Positives = 158/223 (70%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MGVEL +    F E++D DF+D ++V HVR AL SV  GDSD YN+L+ VM+    LAPD
Sbjct: 1   MGVELRNGEAGFHELDDADFTDYDLVYHVRDALTSVSMGDSDKYNELVAVMHHRGPLAPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
           EVALLVT LKALS  V +ID   H +LLS+IF M++WNY PDVMDAL+ELI++LAAS+G 
Sbjct: 61  EVALLVTSLKALSGAVSYIDSVLHESLLSSIFSMNMWNYRPDVMDALLELIISLAASNGT 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            +DSCL MLV NF PP      L QP    RK QVL RVHS+   +ADLVPL+P+ L  I
Sbjct: 121 YIDSCLDMLVGNFTPPNYFTDMLKQPRGIARKDQVLSRVHSSLKVLADLVPLSPMRLLPI 180

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           I +R PH  SKE ++V YVENMLKLES   GELVGS M+  +V
Sbjct: 181 IIQRKPHYCSKEIILVIYVENMLKLESGIFGELVGSAMLSGLV 223


>ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor rrn3-like isoform X3 [Citrus sinensis]
          Length = 534

 Score =  241 bits (616), Expect = 2e-61
 Identities = 131/226 (57%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG+EL   +    EMED + SD E+V HVR AL SV  GD+D+YNQL+ VM+ S RL PD
Sbjct: 1   MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
             ALL T LKALS  V +IDI HH +LL +IFGMS+WNY PD+MDAL  LI++LAASSG 
Sbjct: 61  NRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VDSCL MLV NF PP   L  L +P    RK QVL RVH+A  +I DLVPLAP+ L  I
Sbjct: 121 YVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPI 180

Query: 130 IPRRMPHVFSKE---AMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + +RMP V +K     +IV Y ENMLKLES+++GELV ST+++AVV
Sbjct: 181 VVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVV 226


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  241 bits (616), Expect = 2e-61
 Identities = 131/226 (57%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG+EL   +    EMED + SD E+V HVR AL SV  GD+D+YNQL+ VM+ S RL PD
Sbjct: 1   MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
             ALL T LKALS  V +IDI HH +LL +IFGMS+WNY PD+MDAL  LI++LAASSG 
Sbjct: 61  NRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VDSCL MLV NF PP   L  L +P    RK QVL RVH+A  +I DLVPLAP+ L  I
Sbjct: 121 YVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPI 180

Query: 130 IPRRMPHVFSKE---AMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + +RMP V +K     +IV Y ENMLKLES+++GELV ST+++AVV
Sbjct: 181 VVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVV 226


>ref|XP_007046443.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
           gi|590701668|ref|XP_007046444.1| Major facilitator
           superfamily protein isoform 1 [Theobroma cacao]
           gi|590701672|ref|XP_007046445.1| Major facilitator
           superfamily protein isoform 1 [Theobroma cacao]
           gi|508698704|gb|EOX90600.1| Major facilitator
           superfamily protein isoform 1 [Theobroma cacao]
           gi|508698705|gb|EOX90601.1| Major facilitator
           superfamily protein isoform 1 [Theobroma cacao]
           gi|508698706|gb|EOX90602.1| Major facilitator
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  238 bits (607), Expect = 2e-60
 Identities = 133/226 (58%), Positives = 160/226 (70%), Gaps = 3/226 (1%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMED---FDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRL 500
           MG+EL     ++ EME+    +F+DSEIVSHV+ AL SVL GDS+ YNQL+ VM+ S RL
Sbjct: 1   MGLELP----KYPEMEEDNFVNFTDSEIVSHVKDALTSVLSGDSNSYNQLVAVMHHSKRL 56

Query: 499 APDEVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAAS 320
           APDEVALL T LKAL   V  ID   H +LLSAIF MS+WNYGP V DAL ELIV+LA S
Sbjct: 57  APDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVSLAIS 116

Query: 319 SGNLVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLML 140
           +G  +D CL MLVSNF PP   L  L  P    RK QVL  VH+AF  I+D +PLAPL L
Sbjct: 117 NGKYLDLCLGMLVSNFTPPPYFLDKLKLPRGLERKGQVLSLVHAAFKKISDYIPLAPLRL 176

Query: 139 EHIIPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
            +I+ + MP ++ K+  IV YVENMLKLES  +GELVGSTM++AVV
Sbjct: 177 SNIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTMLMAVV 222


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Glycine max]
          Length = 628

 Score =  234 bits (598), Expect = 2e-59
 Identities = 124/223 (55%), Positives = 160/223 (71%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG    S    F++ME+ DFSDS++V H RG L +V  GD ++Y++L+G ++    L PD
Sbjct: 1   MGRVQVSDKEEFSQMENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
           EVA+LVT LKALS  V +ID  HH +LL A+  MSLWN G D+MDAL+ELI++LA S+G 
Sbjct: 61  EVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            +D CL+MLV NF+PP  LL +L Q    +RK +VL RVH+A   IADLVPLAPL L  I
Sbjct: 121 YIDWCLEMLVKNFVPPFYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPI 180

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + ++MP VFSKE  IV YVENML+LES +LGE VGSTM+ A+V
Sbjct: 181 VIQKMPSVFSKETEIVMYVENMLRLESGALGETVGSTMLPALV 223


>ref|XP_006467185.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Citrus sinensis]
          Length = 588

 Score =  234 bits (596), Expect = 4e-59
 Identities = 129/226 (57%), Positives = 157/226 (69%), Gaps = 3/226 (1%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG EL   +    EMED + SD E+V HVR AL SV  GD+D+YNQL+ VM+ S  L PD
Sbjct: 1   MGRELPKDSAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGCLDPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
             ALL T LKALS  V +IDI HH +LL +IFGMS+WN  PD+MDA+  LI++LAAS G 
Sbjct: 61  NRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNSDPDIMDAMKGLIISLAASDGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VDSCL MLVSNF PP   L  L +P    RK QVL RVH+A  +I+DLVPLAP+ L  I
Sbjct: 121 YVDSCLTMLVSNFTPPSYFLDKLKEPHGIERKHQVLSRVHAALKSISDLVPLAPMRLLPI 180

Query: 130 IPRRMPHVFSKE---AMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + +RMP V +K     MIV Y ENMLKLES+++GE V STM++AVV
Sbjct: 181 VLQRMPTVHNKHERLKMIVVYTENMLKLESSTMGEFVRSTMLMAVV 226


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like isoform X1 [Glycine max]
           gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
           polymerase I-specific transcription initiation factor
           RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  234 bits (596), Expect = 4e-59
 Identities = 122/223 (54%), Positives = 162/223 (72%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG    ++   F++ME+ DFSDS++V H RG L +V  GD ++Y++L+G ++    L PD
Sbjct: 1   MGRVQVNNKEEFSQMENDDFSDSQLVRHFRGVLVAVTTGDRENYDELVGYLHPKKNLNPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
           EVA+LVT LKALS  V +ID  HH +LL A+  MSLWNYG D+MDAL+ELI++LAAS+G 
Sbjct: 61  EVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            +D CL+MLV +F+PP  LL +L Q    +RK +VL RVH+A   IADLVPLAPL L  I
Sbjct: 121 YIDWCLEMLVKHFVPPFYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPI 180

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           + ++MP VFSKE  IV YVENML+LES ++GE VGS M+ A+V
Sbjct: 181 VIQKMPSVFSKETEIVMYVENMLRLESGAIGETVGSIMLPALV 223


>ref|XP_004232589.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Solanum lycopersicum]
          Length = 617

 Score =  233 bits (595), Expect = 5e-59
 Identities = 123/223 (55%), Positives = 163/223 (73%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG+EL + +    EME  + +DS++   VR ALKSV++GD D Y QL+ VM+  + + PD
Sbjct: 1   MGMELHAESAGCAEMEIAEITDSDLFKLVRHALKSVIQGDPDQYEQLLRVMHPDEGVLPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
            VALLVT LKALS  V  +DI HH +L+++I  MS+WNYG DVMDAL+E  ++LA SSG 
Sbjct: 61  -VALLVTCLKALSGSVSCLDIVHHKSLIASILQMSMWNYGTDVMDALMEFNISLATSSGQ 119

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VD CL+MLVSNF+PP S +  L+QP    RK QV++RVHS    IA LVPL+PL LE +
Sbjct: 120 YVDLCLEMLVSNFMPPDSFISLLNQPRGILRKGQVIDRVHSTLTYIAKLVPLSPLRLERM 179

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           I  RMPH+F+KE +I+ YVENMLKLES ++G+LVG TM+VA++
Sbjct: 180 ITERMPHIFTKEPLILIYVENMLKLESGAIGDLVGRTMLVAIM 222


>ref|XP_006364840.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Solanum tuberosum]
          Length = 618

 Score =  232 bits (592), Expect = 1e-58
 Identities = 123/223 (55%), Positives = 162/223 (72%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG+EL +      EME  + +DS++   VR ALKS L+GD D Y QL+ VM+  + + PD
Sbjct: 1   MGMELHAEKAGCAEMEIAEITDSDLFKLVRHALKSALQGDPDQYEQLLRVMHPDEGVLPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
            VALLVT LKALS  V  +DI HH +L+++I  MS+WNYG DVMDAL+E  ++LAASSG 
Sbjct: 61  -VALLVTCLKALSGSVSCLDIVHHKSLIASILQMSMWNYGTDVMDALMEFNISLAASSGQ 119

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VD CL+MLVSNF+PP S +  L+QP    RK QV++RVHS    IA L+PL+PL LE +
Sbjct: 120 YVDLCLEMLVSNFMPPDSFISLLNQPPGILRKGQVIDRVHSTLTYIAKLLPLSPLRLERM 179

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           I  RMPH+F+KE +I+ YVENMLKLES ++G+LVG TM+VA++
Sbjct: 180 ITERMPHIFTKEPLILIYVENMLKLESGAIGDLVGRTMLVAIM 222


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score =  229 bits (584), Expect = 9e-58
 Identities = 120/223 (53%), Positives = 158/223 (70%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG EL ++  +   MED + +D+++V  +RG L SV  GD D YNQL+GV++  DRL+PD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
           EVALLVT LKALS  V  IDI  H +LL+AIF MSLW+YG +VMDAL+ELI++LA S+G 
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VDSCL MLV+NF+PP S +  L +P    RK +VL RVH+A  +I+DLVPLAPL LE  
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           +  +M  VF  E++   YVENML+LE  +L E VG  ++ A+V
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALV 223


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 626

 Score =  229 bits (584), Expect = 9e-58
 Identities = 120/223 (53%), Positives = 158/223 (70%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG EL ++  +   MED + +D+++V  +RG L SV  GD D YNQL+GV++  DRL+PD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
           EVALLVT LKALS  V  IDI  H +LL+AIF MSLW+YG +VMDAL+ELI++LA S+G 
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VDSCL MLV+NF+PP S +  L +P    RK +VL RVH+A  +I+DLVPLAPL LE  
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 130 IPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           +  +M  VF  E++   YVENML+LE  +L E VG  ++ A+V
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALV 223


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
           gi|223536316|gb|EEF37967.1| transcription initiation
           factor ia, putative [Ricinus communis]
          Length = 640

 Score =  213 bits (541), Expect = 9e-53
 Identities = 121/238 (50%), Positives = 162/238 (68%), Gaps = 15/238 (6%)
 Frame = -2

Query: 670 MGVELASSNTRFTE-MED--FDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRL 500
           MGVEL S   +  E MED   +++DS++V HVR AL SV  GD++ Y+QL+GVM+ S RL
Sbjct: 1   MGVELDSQYKKEIEDMEDDGVNYTDSDLVYHVRDALHSVQYGDTNSYDQLVGVMHHSQRL 60

Query: 499 APDEVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAAS 320
            PD+VALL+T LKALS  V +ID  HH  LL +IFGMS+WNYGPDVM+AL+ELI+ALAAS
Sbjct: 61  TPDDVALLLTSLKALSGAVSYIDECHHDRLLQSIFGMSIWNYGPDVMEALLELIIALAAS 120

Query: 319 SGNLVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLML 140
           +G  +D CL+MLV+NF+PP  L+  L  P  + +K QVL R+H+A  +IA L+P+A   L
Sbjct: 121 NGKYIDPCLKMLVTNFVPPMYLIDILKLPRGQAKKEQVLSRLHTALEDIAHLIPMAASRL 180

Query: 139 EHIIP---RRMPHVFSKEA---------MIVTYVENMLKLESNSLGELVGSTMIVAVV 2
              +    +R+P  F K+              YVENML+LES ++ E VGS M++AVV
Sbjct: 181 STEVVSEIQRIPTTFKKDQYHEKDRVKYRTEIYVENMLRLESGAIREFVGSRMLMAVV 238


>ref|XP_007134114.1| hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris]
           gi|561007159|gb|ESW06108.1| hypothetical protein
           PHAVU_010G020100g [Phaseolus vulgaris]
          Length = 620

 Score =  210 bits (534), Expect = 6e-52
 Identities = 109/209 (52%), Positives = 150/209 (71%)
 Frame = -2

Query: 628 MEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPDEVALLVTGLKALSK 449
           ME+  +SD ++V H R  L+ V +GD  +Y++L+G ++    L PDEVA+LVT L+ALS 
Sbjct: 15  MENGGYSDYQLVRHFRSVLEEVTKGDRGNYDELVGYLHPKKNLNPDEVAILVTTLRALSG 74

Query: 448 VVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGNLVDSCLQMLVSNFI 269
            V  ID  HH +LL A+  MSLWNYG +VMDAL+ELI++LAAS+G  +D CL+MLV +F+
Sbjct: 75  AVCCIDPNHHESLLFAVSRMSLWNYGTEVMDALLELIISLAASNGKYIDWCLEMLVKHFV 134

Query: 268 PPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHIIPRRMPHVFSKEAM 89
           PP  L+ +L+     +RK +VL RVH+A   IADLVPLAPL L  I+ + MP+VFSKE  
Sbjct: 135 PPFYLIDSLNNENGIDRKNKVLSRVHAALKEIADLVPLAPLRLCPIVVQNMPNVFSKERE 194

Query: 88  IVTYVENMLKLESNSLGELVGSTMIVAVV 2
           IV Y ENM KLE  ++GE+VG+T++ A+V
Sbjct: 195 IVIYFENMFKLEGGAIGEIVGATILPALV 223


>ref|XP_006450178.1| hypothetical protein CICLE_v10010838mg [Citrus clementina]
           gi|557553404|gb|ESR63418.1| hypothetical protein
           CICLE_v10010838mg [Citrus clementina]
          Length = 198

 Score =  208 bits (530), Expect = 2e-51
 Identities = 111/195 (56%), Positives = 134/195 (68%)
 Frame = -2

Query: 670 MGVELASSNTRFTEMEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDRLAPD 491
           MG+EL   +    EMED + SD E+V HVR AL SV  GD+D+YNQL+ VM+ S RL PD
Sbjct: 1   MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 490 EVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGN 311
             ALL T LKALS  V +IDI HH +LL +IFGMS+WNY PD+MDAL  LI++LAASSG 
Sbjct: 61  NRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSGK 120

Query: 310 LVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHI 131
            VDSCL MLV NF PP   L  L +P    RK QVL RVH+A  +I DLVPLAP+ L  I
Sbjct: 121 YVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPI 180

Query: 130 IPRRMPHVFSKEAMI 86
           + +RMP V +K   +
Sbjct: 181 VVQRMPTVHNKHERV 195


>ref|XP_006296428.1| hypothetical protein CARUB_v10025608mg [Capsella rubella]
           gi|482565136|gb|EOA29326.1| hypothetical protein
           CARUB_v10025608mg [Capsella rubella]
          Length = 608

 Score =  200 bits (509), Expect = 5e-49
 Identities = 111/224 (49%), Positives = 152/224 (67%), Gaps = 5/224 (2%)
 Frame = -2

Query: 658 LASSNTRFTE--MEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDR---LAP 494
           L  S++ +TE  + + D SD  +V  +R AL SV  GDSD Y+Q++ +MN   +     P
Sbjct: 7   LNDSSSLYTEDYVGNVDLSDMGLVQTLRKALTSVKTGDSDLYHQIVEIMNRDMKEFHADP 66

Query: 493 DEVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSG 314
           D VA L T LKALS  V  IDI HH  LLSA+FGM LW+Y P+VMDALV L+++LA SSG
Sbjct: 67  DAVAQLETVLKALSGSVSCIDIAHHSKLLSALFGMKLWDYRPNVMDALVNLVISLAISSG 126

Query: 313 NLVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEH 134
             +DSCL ML+ NF+PP  ++ NLS P   N+K +VL RVH+A + I+ LVPL P  L  
Sbjct: 127 KYLDSCLNMLICNFLPPHWVIRNLSNPRVLNKKIEVLSRVHAALLKISILVPLTPSRLMP 186

Query: 133 IIPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           ++ + MP ++ K+ +IV YVEN+LKLE++S+G  VG +MI+ VV
Sbjct: 187 MLSQNMPKIYKKDHLIVVYVENLLKLENSSIGR-VGGSMILDVV 229


>ref|XP_002881355.1| RNA polymerase I specific transcription initiation factor RRN3
           family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327194|gb|EFH57614.1| RNA polymerase I specific
           transcription initiation factor RRN3 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 614

 Score =  192 bits (487), Expect = 2e-46
 Identities = 104/211 (49%), Positives = 146/211 (69%), Gaps = 2/211 (0%)
 Frame = -2

Query: 628 MEDFDFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVMNSSDR--LAPDEVALLVTGLKAL 455
           +++ D SD+++V  VR AL SV  GD D Y++L+GV+N   +    PD VA L T LKAL
Sbjct: 19  VDNVDLSDTDLVQTVRNALTSVKTGDPDLYSELVGVINKDIKEFRDPDAVAQLETVLKAL 78

Query: 454 SKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAASSGNLVDSCLQMLVSN 275
           S  V  IDI HH  LLS++FGM LW++ P VMDALV L+++LA + G  +D CL MLVSN
Sbjct: 79  SGSVACIDIVHHQKLLSSLFGMKLWDHRPVVMDALVNLVISLAVTRGKYLDPCLNMLVSN 138

Query: 274 FIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLMLEHIIPRRMPHVFSKE 95
           F+PP S+++NLS P   N+K +VL RVH+A + I+ LVPL P  L  ++ + MP +  K+
Sbjct: 139 FVPPPSVVNNLSHPRVLNKKIEVLSRVHAALLKISILVPLTPSRLVPMLFQEMPKIHKKD 198

Query: 94  AMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
             IV YVE++LKLE++ +G+ VG +MI+ VV
Sbjct: 199 HSIVIYVESLLKLENSPIGQ-VGGSMILGVV 228


>gb|AAC16259.1| unknown protein [Arabidopsis thaliana]
          Length = 602

 Score =  191 bits (486), Expect = 2e-46
 Identities = 109/227 (48%), Positives = 154/227 (67%), Gaps = 6/227 (2%)
 Frame = -2

Query: 664 VELASSNTRFTEMEDF----DFSDSEIVSHVRGALKSVLEGDSDHYNQLIGVM--NSSDR 503
           VEL S  +    +E++    D SD+++V  VR AL SV  GDSD Y++++GVM  +  + 
Sbjct: 4   VELMSDPSSLCTVENYVDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEF 63

Query: 502 LAPDEVALLVTGLKALSKVVFHIDIPHHGTLLSAIFGMSLWNYGPDVMDALVELIVALAA 323
             PD VA L T LKALS  V  ID+ HH  LLSA+F M LW++ PDVMDALV L+++LA 
Sbjct: 64  KDPDVVAQLETVLKALSGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDALVNLVISLAV 123

Query: 322 SSGNLVDSCLQMLVSNFIPPQSLLHNLSQPWCRNRKRQVLERVHSAFINIADLVPLAPLM 143
           +SG  +DSCL MLVSNF+PP  +++NLS     N+K  VL RVH+A + I+ LVPL P  
Sbjct: 124 TSGKYLDSCLNMLVSNFVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISILVPLTPSR 183

Query: 142 LEHIIPRRMPHVFSKEAMIVTYVENMLKLESNSLGELVGSTMIVAVV 2
           L  ++ ++MP +  K+  IV YVE++LKLE++S+G+ VG +MI+ +V
Sbjct: 184 LVPMLFQQMPKMHKKDHSIVIYVESLLKLENSSIGQ-VGGSMILGMV 229