BLASTX nr result
ID: Cocculus23_contig00016265
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00016265
(232 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Popu... 73 4e-11
ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu... 72 6e-11
ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citr... 67 2e-09
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi... 67 2e-09
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera] 67 2e-09
gb|EXC34539.1| Pumilio-12-like protein [Morus notabilis] 66 4e-09
ref|XP_004294948.1| PREDICTED: pumilio homolog 12-like [Fragaria... 63 5e-08
ref|XP_007208074.1| hypothetical protein PRUPE_ppa001655mg [Prun... 62 8e-08
ref|XP_007208073.1| hypothetical protein PRUPE_ppa001655mg [Prun... 62 8e-08
ref|XP_006386043.1| hypothetical protein POPTR_0003s20880g [Popu... 61 1e-07
emb|CBI29938.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250... 58 1e-06
emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera] 58 1e-06
>ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Populus trichocarpa]
gi|550346467|gb|ERP65100.1| hypothetical protein
POPTR_0001s03990g [Populus trichocarpa]
Length = 756
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = -1
Query: 220 NVNEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVV 41
N N KL ++ L S+ AG F+L+ SS + SPD ++ +LR P KYNSVDEV
Sbjct: 380 NHNGKLLSNAHLFHSLSTPTAGCFQLDPLSSWNLSPDFTVLKSTNLRAQPPKYNSVDEVT 439
Query: 40 GRIYVMAKDQHGC 2
GRIY+MAKDQHGC
Sbjct: 440 GRIYLMAKDQHGC 452
>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein,
putative [Ricinus communis]
Length = 771
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = -1
Query: 232 ESPANV--NEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYN 59
ES AN+ N K+ + L + +A F+L+ SS D SPD D++ +LR PQKYN
Sbjct: 359 ESLANLSQNGKVLLNGHLRHTLTPPSAECFQLDHLSSWDLSPDIIDLKSTNLRPQPQKYN 418
Query: 58 SVDEVVGRIYVMAKDQHGC 2
SVDEV GR+Y+MAKDQHGC
Sbjct: 419 SVDEVTGRVYLMAKDQHGC 437
>ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citrus clementina]
gi|568871549|ref|XP_006488946.1| PREDICTED: pumilio
homolog 12-like isoform X1 [Citrus sinensis]
gi|568871551|ref|XP_006488947.1| PREDICTED: pumilio
homolog 12-like isoform X2 [Citrus sinensis]
gi|557548186|gb|ESR58815.1| hypothetical protein
CICLE_v10017802mg [Citrus clementina]
Length = 769
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 220 NVNEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVV 41
N + KL + L S+ NAG F+++G +S S DS D++ +R PQKYNSV+EV
Sbjct: 395 NQSGKLLSNGHLCLSLSTPNAGCFQIDGLNSWPLSSDSMDLKI--IRPQPQKYNSVEEVT 452
Query: 40 GRIYVMAKDQHGC 2
GRIY+MAKDQHGC
Sbjct: 453 GRIYLMAKDQHGC 465
>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = -1
Query: 220 NVNEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVV 41
N N ++ P+ Q SS AG +L+ + S D+ ++ N LR PQKYNSVDEVV
Sbjct: 337 NQNGRVIPNGHFRQRLSSPTAGHLQLDSLCTWSLSTDTAHLKTNILRPQPQKYNSVDEVV 396
Query: 40 GRIYVMAKDQHGC 2
GRIY M+KDQ+GC
Sbjct: 397 GRIYHMSKDQNGC 409
>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = -1
Query: 220 NVNEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVV 41
N N ++ P+ Q SS AG +L+ + S D+ ++ N LR PQKYNSVDEVV
Sbjct: 378 NQNGRVIPNGHFRQRLSSPTAGHLQLDSLCTWSLSTDTAHLKTNILRPQPQKYNSVDEVV 437
Query: 40 GRIYVMAKDQHGC 2
GRIY M+KDQ+GC
Sbjct: 438 GRIYHMSKDQNGC 450
>gb|EXC34539.1| Pumilio-12-like protein [Morus notabilis]
Length = 717
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -1
Query: 178 YQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVVGRIYVMAKDQHGC 2
+ +S NAG ++ + + S D+ D D + DL+ LP KYNS++EV GRIY MAKDQHGC
Sbjct: 355 FHNSSNAGCYQFDSERSWDTYRDKRDFKSADLKYLPLKYNSLNEVTGRIYHMAKDQHGC 413
>ref|XP_004294948.1| PREDICTED: pumilio homolog 12-like [Fragaria vesca subsp. vesca]
Length = 752
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Frame = -1
Query: 214 NEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPD-----SEDVR-----HNDLRCLPQK 65
N K+ + L S+ NAG+F L+ S+ P S D++ +ND + LPQK
Sbjct: 368 NGKVVSNGHLRHNLSTPNAGNFPLDNVSTWGMFPGIMHLKSTDLKALPQKYNDTKALPQK 427
Query: 64 YNSVDEVVGRIYVMAKDQHGC 2
Y+S+DE+ GR+Y+MAKDQHGC
Sbjct: 428 YSSMDEISGRVYLMAKDQHGC 448
>ref|XP_007208074.1| hypothetical protein PRUPE_ppa001655mg [Prunus persica]
gi|462403716|gb|EMJ09273.1| hypothetical protein
PRUPE_ppa001655mg [Prunus persica]
Length = 784
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
Frame = -1
Query: 232 ESPANV--NEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVR----------HN 89
ES A+V N K+ + S+ N G F+L+ S+ P ++ +
Sbjct: 391 ESLAHVSHNGKVLSNGHFRHTFSTQNTGCFQLDSLSTWGMFPSLMHLKNTDMKALPQKYT 450
Query: 88 DLRCLPQKYNSVDEVVGRIYVMAKDQHGC 2
D++ LPQKYNS+DE+ GRIY+MAKDQHGC
Sbjct: 451 DMKALPQKYNSMDEITGRIYLMAKDQHGC 479
>ref|XP_007208073.1| hypothetical protein PRUPE_ppa001655mg [Prunus persica]
gi|462403715|gb|EMJ09272.1| hypothetical protein
PRUPE_ppa001655mg [Prunus persica]
Length = 783
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
Frame = -1
Query: 232 ESPANV--NEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVR----------HN 89
ES A+V N K+ + S+ N G F+L+ S+ P ++ +
Sbjct: 391 ESLAHVSHNGKVLSNGHFRHTFSTQNTGCFQLDSLSTWGMFPSLMHLKNTDMKALPQKYT 450
Query: 88 DLRCLPQKYNSVDEVVGRIYVMAKDQHGC 2
D++ LPQKYNS+DE+ GRIY+MAKDQHGC
Sbjct: 451 DMKALPQKYNSMDEITGRIYLMAKDQHGC 479
>ref|XP_006386043.1| hypothetical protein POPTR_0003s20880g [Populus trichocarpa]
gi|550343665|gb|ERP63840.1| hypothetical protein
POPTR_0003s20880g [Populus trichocarpa]
Length = 755
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = -1
Query: 220 NVNEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVV 41
N + K + L + AG F+L+ +S D PD D++ ++ KYNSVDEV
Sbjct: 379 NHHGKFLSNGHLLHSLPAPTAGCFQLDHLTSWDILPDFTDLKSSNFSSQSLKYNSVDEVT 438
Query: 40 GRIYVMAKDQHGC 2
GRIY+MAKDQHGC
Sbjct: 439 GRIYLMAKDQHGC 451
>emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = -1
Query: 214 NEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVVGR 35
N ++ + + + S ++G+ D++D RH++LR +KYNSVDEV GR
Sbjct: 340 NGRMISNGHFYHNAHIVGTRSSPVDGRKYWPQPLDTKDSRHDNLRLQTRKYNSVDEVTGR 399
Query: 34 IYVMAKDQHGC 2
IY+MAKDQ GC
Sbjct: 400 IYLMAKDQSGC 410
>ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = -1
Query: 214 NEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVVGR 35
N ++ + + + S ++G+ D++D RH++LR +KYNSVDEV GR
Sbjct: 441 NGRMISNGHFYHNAHIVGTRSSPVDGRKYWPQPLDTKDSRHDNLRLQTRKYNSVDEVTGR 500
Query: 34 IYVMAKDQHGC 2
IY+MAKDQ GC
Sbjct: 501 IYLMAKDQSGC 511
>emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
Length = 815
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = -1
Query: 214 NEKLFPDSQLHQYQSSLNAGSFKLNGQSSRDSSPDSEDVRHNDLRCLPQKYNSVDEVVGR 35
N ++ + + + S ++G+ D++D RH++LR +KYNSVDEV GR
Sbjct: 441 NGRMISNGHFYHNAHIVGTRSSPVDGRKYWPQPLDTKDSRHDNLRLQTRKYNSVDEVTGR 500
Query: 34 IYVMAKDQHGC 2
IY+MAKDQ GC
Sbjct: 501 IYLMAKDQSGC 511