BLASTX nr result
ID: Cocculus23_contig00015629
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00015629
(679 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 72 2e-10
ref|XP_007226166.1| hypothetical protein PRUPE_ppa015256mg, part... 64 6e-08
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 63 8e-08
gb|EMT09680.1| Serine/threonine-protein kinase/endoribonuclease ... 61 4e-07
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia... 61 4e-07
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 60 5e-07
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera] 60 5e-07
ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302... 60 7e-07
ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prun... 60 8e-07
ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prun... 60 8e-07
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 60 8e-07
ref|XP_007212800.1| hypothetical protein PRUPE_ppa020180mg [Prun... 59 2e-06
ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, part... 59 2e-06
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 58 2e-06
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A... 58 3e-06
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A... 58 3e-06
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 58 3e-06
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 57 4e-06
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 57 4e-06
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 57 6e-06
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 71.6 bits (174), Expect = 2e-10
Identities = 41/127 (32%), Positives = 59/127 (46%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*SKILSKRDF 451
+W W+ LC+ K GGMGFR FN+++I K WRII E+LM ++ K + K ++
Sbjct: 762 HWAKWEKLCQAKMRGGMGFRDFTSFNQALIAKQGWRIIQHPESLMARVLK--VCIYKSNW 819
Query: 450 CGTIXXXXXXXXXXXXXXXXXXETIKMENNEWNKELLKASLVEIDANTIQEIPISKTGVE 271
+ I EN W KE++ ++ DA I I + KT
Sbjct: 820 LPRPEAFKPFSPPTLDIQPVVADLID-ENQNWKKEMIYQHFMKEDAAMIVRIQLPKTPKP 878
Query: 270 DQLAWHY 250
DQ WHY
Sbjct: 879 DQYLWHY 885
>ref|XP_007226166.1| hypothetical protein PRUPE_ppa015256mg, partial [Prunus persica]
gi|462423102|gb|EMJ27365.1| hypothetical protein
PRUPE_ppa015256mg, partial [Prunus persica]
Length = 533
Score = 63.5 bits (153), Expect = 6e-08
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Frame = -2
Query: 654 NTQQGERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*S 475
++ + ++ +W++WD LC K GGG+GF +L FN +++ K WR++ ++L+T++ K
Sbjct: 190 SSTENKKIHWMAWDRLCAPKEGGGLGFGNLHAFNIALLAKQGWRLLQNPDSLITRVLKAK 249
Query: 474 KILSK--------------RDFCGTIXXXXXXXXXXXXXXXXXXETIKMENNEWNKELLK 337
+ + C I ++ EWN LL+
Sbjct: 250 YFPTPFLETAVSPHASVVWKSLCEA--RTVIIQVSKWQCYHKSINLIHGDSREWNVTLLQ 307
Query: 336 ASLVEIDANTIQEIPISKTGVEDQLAWHY-RRIRFTVLS 223
+ I IP+S D L WHY ++ FTV S
Sbjct: 308 KIFFPKEVMLICSIPLSLRLTPDMLVWHYDKKSMFTVKS 346
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 63.2 bits (152), Expect = 8e-08
Identities = 25/63 (39%), Positives = 44/63 (69%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*SKILSKRDF 451
+W WD LC+ K+ GG+GFR LEGFN++++ KT WRI++ ++++ ++F +K + D+
Sbjct: 433 HWCKWDLLCRNKKEGGLGFRDLEGFNQALLAKTVWRIVLHPDSIINRVFH-AKYVRNGDW 491
Query: 450 CGT 442
T
Sbjct: 492 AAT 494
>gb|EMT09680.1| Serine/threonine-protein kinase/endoribonuclease ire-1 [Aegilops
tauschii]
Length = 1306
Score = 60.8 bits (146), Expect = 4e-07
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = -2
Query: 609 LCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*SKILSKRDFCGTIXXX 430
+ K KR GG+GFR + FN++++ + WR+I + E+L I K SK + T
Sbjct: 1 MTKPKRDGGIGFRDMHLFNQALLARQAWRLIQKPESLCAGILK-SKYFPNGNLLDT--GF 57
Query: 429 XXXXXXXXXXXXXXXETIKMENNEWNKELLKASLVEIDANTIQEIPISKTGVEDQLAWHY 250
E I E EWN EL++ DA I ++ K +ED +AWHY
Sbjct: 58 SSDASPVWRGIKFGLERIGDETKEWNVELVRQIFHNFDAEEICKLKTPKAEIEDCVAWHY 117
Query: 249 RRIR-FTVLS 223
+ FTV S
Sbjct: 118 EKSGIFTVKS 127
>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = -2
Query: 654 NTQQGERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*S 475
N Q+ + +W +WD L +K GG+GF+ +E FN +++ K WR++ R E+LM K+FK S
Sbjct: 32 NKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFK-S 90
Query: 474 KILSKRD 454
+ K D
Sbjct: 91 RYFHKSD 97
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 60.5 bits (145), Expect = 5e-07
Identities = 26/65 (40%), Positives = 43/65 (66%)
Frame = -2
Query: 675 WQDSGVVNTQQGERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLM 496
W DS +G + +W++WD +C K GG+GFR++E FN++++ K WRII L++L+
Sbjct: 787 WGDS-----DRGRKIHWVAWDKMCAPKNEGGLGFRNMELFNQALLAKKGWRIINSLDSLV 841
Query: 495 TKIFK 481
T+ K
Sbjct: 842 TRTLK 846
>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
Length = 517
Score = 60.5 bits (145), Expect = 5e-07
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -2
Query: 642 GERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*SKILS 463
G R NWLSWD LC K GG+GFR+L FN +++ K W +I + ++L+ ++ K ++
Sbjct: 235 GRRINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITKPDSLIARLLK-ARYYC 293
Query: 462 KRDF 451
RDF
Sbjct: 294 SRDF 297
>ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302635 [Fragaria vesca
subsp. vesca]
Length = 913
Score = 60.1 bits (144), Expect = 7e-07
Identities = 21/48 (43%), Positives = 37/48 (77%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKI 487
+W WD LC+ K+ GG+GFR LEGFN++++ KT WRI++ ++++ ++
Sbjct: 396 HWCKWDLLCRNKKEGGLGFRDLEGFNQALLAKTVWRIVLHPDSIINRV 443
>ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
gi|462424248|gb|EMJ28511.1| hypothetical protein
PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 59.7 bits (143), Expect = 8e-07
Identities = 25/71 (35%), Positives = 45/71 (63%)
Frame = -2
Query: 654 NTQQGERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*S 475
++ + ++ +W++WD LC K GG+GFR+L FN +++ K WR++ ++L+TK+ K +
Sbjct: 474 SSTENKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKVLK-A 532
Query: 474 KILSKRDFCGT 442
K R F T
Sbjct: 533 KYFPTRSFLET 543
>ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
gi|462423643|gb|EMJ27906.1| hypothetical protein
PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 59.7 bits (143), Expect = 8e-07
Identities = 25/71 (35%), Positives = 45/71 (63%)
Frame = -2
Query: 654 NTQQGERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*S 475
++ + ++ +W++WD LC K GG+GFR+L FN +++ K WR++ ++L+TK+ K +
Sbjct: 722 SSTENKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLITKVLK-A 780
Query: 474 KILSKRDFCGT 442
K R F T
Sbjct: 781 KYFPTRSFLET 791
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 59.7 bits (143), Expect = 8e-07
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = -2
Query: 648 QQGERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK 481
++ + +W SW LCK K GGMGFR L+ FN +++ K WR++ R ++L+ ++FK
Sbjct: 80 EETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFK 135
>ref|XP_007212800.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
gi|462408665|gb|EMJ13999.1| hypothetical protein
PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 58.5 bits (140), Expect = 2e-06
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK 481
+W+ W+ LCK K GG+GFR LE FN++++ K WRI+ E+L+ +IF+
Sbjct: 790 HWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFR 839
>ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
gi|462403415|gb|EMJ08972.1| hypothetical protein
PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 58.5 bits (140), Expect = 2e-06
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK 481
+W+ W+ LCK K GG+GFR LE FN++++ K WRI+ E+L+ +IF+
Sbjct: 540 HWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFR 589
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 58.2 bits (139), Expect = 2e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK 481
+W++WD LC K GG+GFR+++ FN +++ K WR+I ++L K+FK
Sbjct: 621 HWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFK 670
>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*SKILSKRDF 451
+W W+ LC K GG+GFR FN+++I K WR++ L++LM KI K +K DF
Sbjct: 182 HWARWEKLCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILK-AKYFKHTDF 240
>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 478
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*SKILSKRDF 451
+W W+ LC K GG+GFR FN+++I K WR++ L++LM KI K +K DF
Sbjct: 273 HWARWEKLCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILK-AKYFKHTDF 331
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 57.8 bits (138), Expect = 3e-06
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = -2
Query: 648 QQGERNNWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK 481
++ + +W SW LCK K GGMGFR L+ FN +++ K WR+ R ++L+ ++FK
Sbjct: 80 EETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFK 135
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 57.4 bits (137), Expect = 4e-06
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -2
Query: 630 NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK 481
+W++WD LC K+ GG+GFR + FNK+++ K WR++ R ++L+ ++ K
Sbjct: 595 HWIAWDKLCSSKKEGGLGFRDMHVFNKALLAKQGWRMLCRPQSLLAQVLK 644
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 57.4 bits (137), Expect = 4e-06
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 7/208 (3%)
Frame = -2
Query: 651 TQQGERN-NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLETLMTKIFK*S 475
+++G+R +W SWD + K K GG+GFR FN++++ + WR+I +L KI++
Sbjct: 693 SEKGKRKAHWKSWDCITKPKHCGGLGFRDFRLFNQALLARQAWRLIENPHSLSIKIWRDP 752
Query: 474 KILSKRDFCGTIXXXXXXXXXXXXXXXXXXETIKMENNEWNKELLKASLVEIDANTIQEI 295
+ RDF + +N W+++++ +D I+ I
Sbjct: 753 WL--PRDF------SRRPITPKGNCRLKWVADLLDQNGSWDRDVISQLFWPLDGEIIKSI 804
Query: 294 PISKTGVEDQLAWHYRRI-RFTVLSQDIGHIKIGTA-----RAGIKLIFIL*HMYDIQVF 133
+S ED +AW+ ++ +F++ S + +++ A +G + H++ +
Sbjct: 805 RLSSRQDEDFIAWYPDKMGQFSIRSAYMLAVQLANAGESSSSSGNDTKKVWNHVWKCNIP 864
Query: 132 QLRCIFSCRVR*GCPPYSIKFMQKENHE 49
Q +FS R C P + +K N E
Sbjct: 865 QKVKVFSWRAISNCLPTMVN-KKKRNPE 891
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 57.0 bits (136), Expect = 6e-06
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = -2
Query: 675 WQDSGVVNTQQGERN--NWLSWDGLCKFKRGGGMGFRSLEGFNKSIIRKTRWRIIMRLET 502
W SG G++N +W WD LC+ K GG+GFR +E FN++++ KT WRI+M+ +
Sbjct: 830 WWGSG------GKKNGIHWCKWDLLCRNKMDGGLGFRDIECFNQALLAKTVWRIVMQPTS 883
Query: 501 LMTKIFK 481
L ++ +
Sbjct: 884 LANRVLQ 890