BLASTX nr result

ID: Cocculus23_contig00015535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00015535
         (436 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277486.1| PREDICTED: uncharacterized protein LOC100250...    64   3e-08
ref|XP_006843596.1| hypothetical protein AMTR_s00007p00129140 [A...    57   2e-06
ref|XP_002525659.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>ref|XP_002277486.1| PREDICTED: uncharacterized protein LOC100250230 [Vitis vinifera]
           gi|297745882|emb|CBI15938.3| unnamed protein product
           [Vitis vinifera]
          Length = 77

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = +3

Query: 51  WWCVVLSFAILCCSARHSTVSFLGNEIM-MQGRSLMAM-TDDYNDPSANRGHDPRNKGGI 224
           WWCV  + + L C+AR++ +  +  E     GR L A+ TDDY+DPSAN+GHDPRN+ G 
Sbjct: 8   WWCVFFA-SFLICTARNTLIFPVDEEAAGAVGRRLKAVSTDDYSDPSANKGHDPRNRIGG 66

Query: 225 GGRRSRDN 248
           GG + RD+
Sbjct: 67  GGWKGRDS 74


>ref|XP_006843596.1| hypothetical protein AMTR_s00007p00129140 [Amborella trichopoda]
           gi|548845964|gb|ERN05271.1| hypothetical protein
           AMTR_s00007p00129140 [Amborella trichopoda]
          Length = 91

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
 Frame = +3

Query: 126 EIMMQG--RSLMAMTDDYNDPSANRGHDPRNKGGIGGRRSR--DNP 251
           EIMM+   R L+A TDDY DPSANRGHDP++KGG GG R    DNP
Sbjct: 46  EIMMEEGRRELIANTDDYTDPSANRGHDPKSKGGGGGGRKTRGDNP 91


>ref|XP_002525659.1| conserved hypothetical protein [Ricinus communis]
           gi|223535095|gb|EEF36777.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 91

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
 Frame = +3

Query: 54  WCVVLSFAILCCSARHSTVSFLGNEIMMQGRSLMAMTDDYNDPSANRGHDPR----NKGG 221
           +C++L FA+L  +     +S  G  +   GRSL AM +DY++PSAN+GHDPR    N  G
Sbjct: 9   FCLLLVFALLSSARNPIPISENGIALANTGRSLKAMLNDYSEPSANQGHDPRSKDGNNNG 68

Query: 222 IGGRRSR 242
            GG  SR
Sbjct: 69  GGGGNSR 75


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