BLASTX nr result
ID: Cocculus23_contig00015483
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00015483
(1913 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 602 e-169
ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theob... 583 e-164
gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus... 570 e-160
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 567 e-159
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 565 e-158
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 538 e-150
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 538 e-150
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 537 e-150
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 526 e-146
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 525 e-146
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an... 523 e-145
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP... 521 e-145
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 514 e-143
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 513 e-142
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 513 e-142
ref|XP_007020447.1| RNA polymerase I subunit 43 isoform 4 [Theob... 511 e-142
ref|XP_007205309.1| hypothetical protein PRUPE_ppa006811mg [Prun... 507 e-141
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ... 506 e-140
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 505 e-140
ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thalia... 503 e-140
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 602 bits (1551), Expect = e-169
Identities = 293/372 (78%), Positives = 328/372 (88%)
Frame = -2
Query: 1726 MPRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLED 1547
M R ALDMPDVP GQLPPH+ELQRTRVLC DAPT TE+VQYSGAY+SMGVDNS+R++
Sbjct: 1 MHRSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQ 60
Query: 1546 FVMKFKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDE 1367
F F+VEVIRL+EDDMEFDMIGID S+ANAFRRILIAE+PTMAIEKVL ANNTS++QDE
Sbjct: 61 FCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDE 120
Query: 1366 VLAHRLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPN 1187
VLAHRLGLIPI ADP+LF+ +SENDTPNEKNTIVF +HV+C+R R+TVKS++LKWLP+
Sbjct: 121 VLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPH 180
Query: 1186 GSEFQLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIEL 1007
GSEF LA SFSCSQ SLPEFSD SI PKH DII+AKLGPGQEIEL
Sbjct: 181 GSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIEL 240
Query: 1006 EAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKG 827
EAHAVKG+GKTHAKWSPVATAWYRMLPEVVLLQE+EDEKAEELVKKCPVNVFDIED+ KG
Sbjct: 241 EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKG 300
Query: 826 RRRVTVARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKIL 647
+++ TVARPRACTLCRECIRG+DW+K VA+RRVKNHFIFTIESTGALPPEVLF EAVK+L
Sbjct: 301 KKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVL 360
Query: 646 EDKCERVISDLS 611
EDKCERVI++LS
Sbjct: 361 EDKCERVITELS 372
>ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
gi|508720072|gb|EOY11969.1| RNA polymerase I subunit 43
isoform 1 [Theobroma cacao]
Length = 383
Score = 583 bits (1503), Expect = e-164
Identities = 288/370 (77%), Positives = 320/370 (86%)
Frame = -2
Query: 1720 RVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFV 1541
+ S D+PDVP GQLPPHLELQRTRVLC DAP TESV YSGAYASMGVDNS+RL+ F
Sbjct: 14 KFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLDHFC 73
Query: 1540 MKFKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVL 1361
F+VEV+RLTE+DMEFDMIGIDA++ANAFRRILIAE+PTMAIEKVL ANNTSV+QDEVL
Sbjct: 74 HNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQDEVL 133
Query: 1360 AHRLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGS 1181
AHRLGLIPI DP+LFEYMSEND PNEKNTIVFK+HV CKR S R+TVKSD+LKWLPNGS
Sbjct: 134 AHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKWLPNGS 193
Query: 1180 EFQLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEA 1001
E SFSCSQ +LPEF++N IAPK+ DII++KLGPGQEIELEA
Sbjct: 194 ELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGPGQEIELEA 253
Query: 1000 HAVKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRR 821
HAVKG+GKTHAKWSPVATAWYRMLPEVVLL+EVED+ AE L KCPVNVFDIED+GKG++
Sbjct: 254 HAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDIEDLGKGKK 313
Query: 820 RVTVARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILED 641
R TVARPRACTLCRECIR E+WEKRVA+ RVK+HFIFTIESTGALPPEVLFTEAVKILED
Sbjct: 314 RATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFTEAVKILED 373
Query: 640 KCERVISDLS 611
KCERVI++LS
Sbjct: 374 KCERVITELS 383
>gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus guttatus]
Length = 381
Score = 570 bits (1470), Expect = e-160
Identities = 274/370 (74%), Positives = 317/370 (85%)
Frame = -2
Query: 1720 RVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFV 1541
++ D+PDVP G LP HLELQRTR +C +DAP TE++QYSGAYASMGVDNS+R E F
Sbjct: 12 KIPVWDLPDVPSGNLPAHLELQRTRTVCTNDAPIHTENIQYSGAYASMGVDNSMRFEKFC 71
Query: 1540 MKFKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVL 1361
F+VEVIRL +D+MEFDM+GIDASLANAFRRILI+E+PTMAIE VL ANNTSV+QDEVL
Sbjct: 72 KNFRVEVIRLGDDEMEFDMVGIDASLANAFRRILISELPTMAIENVLVANNTSVVQDEVL 131
Query: 1360 AHRLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGS 1181
AHRLGLIP+K DP+LF Y SEND P+EKNTIVFK+H +C++ S R+ VKS +LKWLP GS
Sbjct: 132 AHRLGLIPLKVDPRLFNYKSENDQPSEKNTIVFKLHSRCEKKSSRINVKSSELKWLPGGS 191
Query: 1180 EFQLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEA 1001
EF L+ SF+CSQ SLPEFS N IAP H+DI +A LGPGQEIELEA
Sbjct: 192 EFALSTEKPTQDSTSKVKTYTSFTCSQDSLPEFSSNPIAPTHDDITLAVLGPGQEIELEA 251
Query: 1000 HAVKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRR 821
HAVKG+GKTHAKWSPVATAWYRMLPEV+LLQE+EDEKAEEL+KKCPVNVFDIED+GKGR+
Sbjct: 252 HAVKGMGKTHAKWSPVATAWYRMLPEVILLQEIEDEKAEELIKKCPVNVFDIEDIGKGRK 311
Query: 820 RVTVARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILED 641
R TVARPR+CTLCRECIRG+DW+K VAL+RVK+HFIFTIESTGALPP+VLFTEAVKILED
Sbjct: 312 RATVARPRSCTLCRECIRGDDWDKLVALQRVKDHFIFTIESTGALPPDVLFTEAVKILED 371
Query: 640 KCERVISDLS 611
KCERVI+++S
Sbjct: 372 KCERVITEMS 381
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 567 bits (1461), Expect = e-159
Identities = 279/370 (75%), Positives = 315/370 (85%)
Frame = -2
Query: 1720 RVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFV 1541
+VS D+PD+P G+LPPH+ELQRTRVLC S APT TE+V YSGAYA+MGVDNSVR E F
Sbjct: 24 KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83
Query: 1540 MKFKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVL 1361
FKVE++RL ED++EFDMIGID SLANAFRRILIAE+PTMAIEKVL ANNTS+IQDEVL
Sbjct: 84 DNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVL 143
Query: 1360 AHRLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGS 1181
AHRLGLIPIK DP+LFEYMSEND PNEKNTIVFK+HV+C + S R+ V S +LKWLPNGS
Sbjct: 144 AHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCTKGSDRLRVLSSELKWLPNGS 203
Query: 1180 EFQLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEA 1001
E L SFSCSQ + PEFSD IAPK DIIVAKLGPGQEIELEA
Sbjct: 204 ELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEPIAPKDADIIVAKLGPGQEIELEA 263
Query: 1000 HAVKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRR 821
HAVKG+GKTHAKWSPVATAWYRMLPEV+LL+++ED++AE LVKKCP+ VFDIED+GKG++
Sbjct: 264 HAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDEAEALVKKCPLKVFDIEDIGKGKK 323
Query: 820 RVTVARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILED 641
R TVARPRACTLCRECIR E W+K VALRRV +HFIFTIESTGALPPEVLFTEAVKILE+
Sbjct: 324 RATVARPRACTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILEE 383
Query: 640 KCERVISDLS 611
KCERVI++LS
Sbjct: 384 KCERVITELS 393
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 565 bits (1457), Expect = e-158
Identities = 278/370 (75%), Positives = 315/370 (85%)
Frame = -2
Query: 1720 RVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFV 1541
+VS D+PD+P G+LPPH+ELQRTRVLC S APT TE+V YSGAYA+MGVDNSVR E F
Sbjct: 24 KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83
Query: 1540 MKFKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVL 1361
FKVE++RL ED++EFDMIGID SLANAFRRILIAE+PTMAIEKVL ANNTS+IQDEVL
Sbjct: 84 NNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVL 143
Query: 1360 AHRLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGS 1181
AHRLGLIPI+ DP+LFEYMSEND PNEKNTIVFK+H +C + S R+ V S +LKWLPNGS
Sbjct: 144 AHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCTKGSDRLRVLSSELKWLPNGS 203
Query: 1180 EFQLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEA 1001
E L SFSCSQ +LPEFS++ IAPK DIIVAKLGPGQEIELEA
Sbjct: 204 ELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSNDPIAPKDADIIVAKLGPGQEIELEA 263
Query: 1000 HAVKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRR 821
HAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED++AE LVKKCPV VFDIED+GKG++
Sbjct: 264 HAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIEDDEAEALVKKCPVKVFDIEDIGKGKK 323
Query: 820 RVTVARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILED 641
R TVARPR CTLCRECIR E W+K VALRRV +HFIFTIESTGALPPEVLFTEAVKILE+
Sbjct: 324 RATVARPRICTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILEE 383
Query: 640 KCERVISDLS 611
KCERVI++LS
Sbjct: 384 KCERVITELS 393
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 538 bits (1387), Expect = e-150
Identities = 267/370 (72%), Positives = 311/370 (84%)
Frame = -2
Query: 1720 RVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFV 1541
+ S D+PDVPMGQLPPHL+LQRTRV+C SDAP T+++ YSGAYAS+GVDNS++L+ F
Sbjct: 13 KFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFR 72
Query: 1540 MKFKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVL 1361
FKVEVI+LT+DDMEFDMIGIDA++ANAFRRILI+E+PTMAIEKVL ANNTS+IQDEVL
Sbjct: 73 DNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVL 132
Query: 1360 AHRLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGS 1181
AHRLGLIPI ADP+LFEY+S NDTPNEKNTIVFK+H CKR R TV S++LKWLP GS
Sbjct: 133 AHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSEELKWLPGGS 192
Query: 1180 EFQLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEA 1001
+ SF+ Q +P+ ++P + IIVAKLGPGQEIELEA
Sbjct: 193 QL----LKESEKADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKLGPGQEIELEA 244
Query: 1000 HAVKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRR 821
HAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++EDE AEEL KKCPVNVFDIED+G G++
Sbjct: 245 HAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIEDIGNGKK 304
Query: 820 RVTVARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILED 641
R TVARPRACTLCRECIRG +W+KRV+LRRVK+HFIFTIESTGALPPEVLFTEAVK+LED
Sbjct: 305 RATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAVKVLED 364
Query: 640 KCERVISDLS 611
KCERVI++LS
Sbjct: 365 KCERVITELS 374
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 538 bits (1386), Expect = e-150
Identities = 273/369 (73%), Positives = 312/369 (84%), Gaps = 1/369 (0%)
Frame = -2
Query: 1714 SALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMK 1535
S D+PDVP +LPPH+E QRTRV C DAP TE+V YSGAYASMGVDNS++L+ F
Sbjct: 17 SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 75
Query: 1534 FKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAH 1355
F+VEVIRLT+DDMEFD+IGIDA++ANAFRRILIAE+PTMAIEKVL ANNTSVIQDEVLAH
Sbjct: 76 FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 135
Query: 1354 RLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEF 1175
RLGLIPI DP+LFEYMSENDT NEKNTIVFK+HV C+R R+TVK+++LKWLPNGSE
Sbjct: 136 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSEL 195
Query: 1174 QLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHA 995
L SFS SQ SLPEFS+N I P DI +A+LGPGQEIELEAHA
Sbjct: 196 PL-ETKPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIRPM-LDITIARLGPGQEIELEAHA 253
Query: 994 VKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRV 815
VKG+GKTHAKWSPVATAWYRMLPE+VLL++VEDE AE+LVK CPVNVFDIED+G G++R
Sbjct: 254 VKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRA 313
Query: 814 TVARPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDK 638
TVA+PRACTLCREC+R GE+WEKRV++RRVK+HFIFTIESTGAL PE LFTEAVKILEDK
Sbjct: 314 TVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDK 373
Query: 637 CERVISDLS 611
CERVI++LS
Sbjct: 374 CERVITELS 382
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 537 bits (1384), Expect = e-150
Identities = 273/369 (73%), Positives = 311/369 (84%), Gaps = 1/369 (0%)
Frame = -2
Query: 1714 SALDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMK 1535
S D+PDVP +LPPH+E QRTRV C DAP TE+V YSGAYASMGVDNS++L+ F
Sbjct: 56 SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 114
Query: 1534 FKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAH 1355
F+VEVIRLT+DDMEFD+IGIDA++ANAFRRILIAE+PTMAIEKVL ANNTSVIQDEVLAH
Sbjct: 115 FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 174
Query: 1354 RLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEF 1175
RLGLIPI DP+LFEYMSENDT NEKNTIVFK+HV C+R R+TVK+++LKWLPNGSE
Sbjct: 175 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSEL 234
Query: 1174 QLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHA 995
L SFS SQ LPEFS+N I P DI +A+LGPGQEIELEAHA
Sbjct: 235 PL-ETKPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPM-LDITIARLGPGQEIELEAHA 292
Query: 994 VKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRV 815
VKG+GKTHAKWSPVATAWYRMLPE+VLL++VEDE AE+LVK CPVNVFDIED+G G++R
Sbjct: 293 VKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRA 352
Query: 814 TVARPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDK 638
TVARPRACTLCREC+R GE+WEKRV++RRVK+HFIFTIESTGAL PE LFTEAVKILEDK
Sbjct: 353 TVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDK 412
Query: 637 CERVISDLS 611
CERVI++LS
Sbjct: 413 CERVITELS 421
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 526 bits (1354), Expect = e-146
Identities = 270/368 (73%), Positives = 306/368 (83%), Gaps = 2/368 (0%)
Frame = -2
Query: 1708 LDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFK 1529
L + +VP +LPPHLEL +TRVLC +DAP T++VQYSGAYA +GVDNSVRL+ F FK
Sbjct: 24 LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCENFK 82
Query: 1528 VEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRL 1349
VEV RLT+ D+EFDMIGID ++ANAFRRILIAEVPTMAIE+V ANNTSV+QDEVL+HRL
Sbjct: 83 VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 142
Query: 1348 GLIPIKADPKLFEYMSE-NDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQ 1172
GLIPI+ADP+LFEY D NEKNTIVFK+HV+C+ R+TVKSD+LKWLPNGSE
Sbjct: 143 GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSE-- 200
Query: 1171 LAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAV 992
L SF+CSQ SLPEFS+NSI + DII+AKLGPGQEIELEAHAV
Sbjct: 201 LPCEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAV 260
Query: 991 KGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVT 812
KG+GKTHAKWSPVATAWYRMLPEVVLL+ VEDE AEEL KCPVNVFDIED+GKG+RR
Sbjct: 261 KGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAK 320
Query: 811 VARPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 635
VARPR CTLCRECIR G++WE RV+LRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC
Sbjct: 321 VARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 380
Query: 634 ERVISDLS 611
ERVI++LS
Sbjct: 381 ERVITELS 388
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 525 bits (1352), Expect = e-146
Identities = 270/368 (73%), Positives = 305/368 (82%), Gaps = 2/368 (0%)
Frame = -2
Query: 1708 LDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFK 1529
L + +VP +LPPHLEL +TRVLC +DAP T++VQYSGAYA MGVDNSVRL+ F FK
Sbjct: 29 LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENFK 87
Query: 1528 VEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRL 1349
VEV RLT+ D+EFDMIGID ++ANAFRRILIAEVPTMAIE+V ANNTSV+QDEVL+HRL
Sbjct: 88 VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 147
Query: 1348 GLIPIKADPKLFEYMSE-NDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQ 1172
GLIPI+ADP+LFEY D NEKNTIVFK+HV+C+ R+TVKSD+LKWLPNGSE
Sbjct: 148 GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSE-- 205
Query: 1171 LAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAV 992
L SF+CSQ SLPEFS+NSI + DII+AKLGPGQEIELEAHAV
Sbjct: 206 LPCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAV 265
Query: 991 KGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVT 812
KG GKTHAKWSPVAT WYRMLPEVVLL++VEDE AEEL KCPVNVFDIED+GKG+RR
Sbjct: 266 KGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKRRAK 325
Query: 811 VARPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 635
VARPR CTLCRECIR G++WE RV+LRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC
Sbjct: 326 VARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 385
Query: 634 ERVISDLS 611
ERVI++LS
Sbjct: 386 ERVITELS 393
>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cucumis sativus] gi|449522768|ref|XP_004168398.1|
PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cucumis sativus]
Length = 391
Score = 523 bits (1347), Expect = e-145
Identities = 264/367 (71%), Positives = 308/367 (83%), Gaps = 1/367 (0%)
Frame = -2
Query: 1708 LDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFK 1529
+++PDVPM +LPPH+ELQRTRV C +DAP T+++QYSGA+ASMG DNS+RL++F FK
Sbjct: 30 MNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFK 88
Query: 1528 VEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRL 1349
+EVI L EDD+EFDMIGID +LANAFRRILI+EVPTMAIEKVLFANNTS++QDEVLAHRL
Sbjct: 89 IEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHRL 148
Query: 1348 GLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQL 1169
GL+PI+ DP+LF+Y S+ D PNE NTIVF++H C+R R+TV S L WLPNGSEF L
Sbjct: 149 GLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFPL 207
Query: 1168 AXXXXXXXXXXXXXXXXSFSCSQASL-PEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAV 992
SFSCSQ +L EFS+N I PK DII+A+LGPGQEIELEAHAV
Sbjct: 208 V--SDKSVSNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAV 265
Query: 991 KGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVT 812
KG+GKTHAKWSPVATAWYRMLPEVVL++E+EDE AEEL KKCPVNVFDIED+ G++R T
Sbjct: 266 KGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRAT 324
Query: 811 VARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCE 632
VARPR CTLCRECIRG+ WEKRVALRRVK+HFIF IESTGALPPEVLFTEAVKILEDKCE
Sbjct: 325 VARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCE 384
Query: 631 RVISDLS 611
R+I++LS
Sbjct: 385 RLIAELS 391
>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
notabilis]
Length = 411
Score = 521 bits (1343), Expect = e-145
Identities = 267/366 (72%), Positives = 306/366 (83%), Gaps = 2/366 (0%)
Frame = -2
Query: 1702 MPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFKVE 1523
+ DVPMG+LPPHLE QRT V C +DAP T+++QYSGAYAS+GVDNSVR++ F F+VE
Sbjct: 49 LSDVPMGKLPPHLEFQRTHVECKADAPLHTDTIQYSGAYASLGVDNSVRMDSFCDNFRVE 108
Query: 1522 VIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRLGL 1343
V+RLTEDDMEFDMIGID +LANAFRRILI+EVPTMAIE+VL ANNTSV+QDEVLAHRLGL
Sbjct: 109 VMRLTEDDMEFDMIGIDPALANAFRRILISEVPTMAIERVLIANNTSVVQDEVLAHRLGL 168
Query: 1342 IPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQLA- 1166
IPI DP+LFE+ + N+TPNEKNTIVFK+HV+ ++ + +VKS++L W P GSEF LA
Sbjct: 169 IPINVDPRLFEF-AGNNTPNEKNTIVFKLHVR-RKPNEPSSVKSNELIWSPKGSEFLLAS 226
Query: 1165 XXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAVKG 986
SF+C Q SLPEFS+N+I E+I++AKLGPGQEIELEAHAVKG
Sbjct: 227 EDSKSADTSSKPRTYTSFTCRQDSLPEFSNNAIKVM-ENILIAKLGPGQEIELEAHAVKG 285
Query: 985 VGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVTVA 806
+GKTHAKWSPVATAWYRMLPEVVLLQEVEDE AEEL KCPV VFDIED+GKGR+R TVA
Sbjct: 286 IGKTHAKWSPVATAWYRMLPEVVLLQEVEDEAAEELKAKCPVGVFDIEDIGKGRKRATVA 345
Query: 805 RPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 629
RPR CTLCRECIR G+ WE RV+LRR KNHFIF IESTGALPPEVLFTEAVKILEDKCER
Sbjct: 346 RPRGCTLCRECIRGGQQWEDRVSLRRRKNHFIFNIESTGALPPEVLFTEAVKILEDKCER 405
Query: 628 VISDLS 611
VI+DLS
Sbjct: 406 VIADLS 411
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 514 bits (1325), Expect = e-143
Identities = 260/368 (70%), Positives = 303/368 (82%), Gaps = 2/368 (0%)
Frame = -2
Query: 1708 LDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFK 1529
+++ DVP +L PHLEL +TRV+C+ DAP T+++ YSGAYA++GVDNSVRL+ F FK
Sbjct: 24 MNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCQNFK 82
Query: 1528 VEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRL 1349
VEV +LT+DD+EFDMIGID SLANAFRRILIAEVPTMAIE+V ANNTS+IQDEVL+HRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 1348 GLIPIKADPKLFEYMSE-NDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQ 1172
GLIPI ADP LFEY NEKNTIVFK+HV+C++ R+TVKSD+LKWLPNGS+
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRITVKSDELKWLPNGSD-- 200
Query: 1171 LAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAV 992
L SFSCSQ SLPEFS + P + DII+AKLGPGQEIELE HAV
Sbjct: 201 LIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDIILAKLGPGQEIELEVHAV 260
Query: 991 KGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVT 812
KGVGKTHAKWSPVATAWYRMLPEVVL ++V DE A+ELV KCPVNVFDIED+GKGR+R T
Sbjct: 261 KGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCPVNVFDIEDIGKGRKRAT 320
Query: 811 VARPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 635
V +PRACTLCRECIR G++WE RV+LRRVK+HFIFTIESTGA+PPEVLFT+AVKILEDKC
Sbjct: 321 VVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPEVLFTQAVKILEDKC 380
Query: 634 ERVISDLS 611
ERVI++LS
Sbjct: 381 ERVITELS 388
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 513 bits (1321), Expect = e-142
Identities = 245/362 (67%), Positives = 298/362 (82%)
Frame = -2
Query: 1705 DMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFKV 1526
D+PDVP G+LPPHL+LQRTRVLC S+APT TE++QYSGAYA MGVDNS+ + F F+V
Sbjct: 3 DLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENFRV 62
Query: 1525 EVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRLG 1346
E++ + E D+EFD+IGIDA++ANAFRRILIAE+PTMAIEKVL ANNTSVI DEVL+HRLG
Sbjct: 63 EIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHRLG 122
Query: 1345 LIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQLA 1166
LIP+K DP+ F +MSE+D PNEKNT+VFK+HV C+R R TVK+D+LKWLPNGSE +L
Sbjct: 123 LIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKTVKTDELKWLPNGSELRLE 182
Query: 1165 XXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAVKG 986
SF+CSQ S+PEFS +++ P ++I +A+LGPGQEIELEAHAVKG
Sbjct: 183 TERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSDEITIARLGPGQEIELEAHAVKG 242
Query: 985 VGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVTVA 806
+GKTHAKWSPVATAWYR+LPE+ LL E++++KA+ELVKKCP VFDIED G R TVA
Sbjct: 243 MGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVKKCPQKVFDIEDAGGDGIRATVA 302
Query: 805 RPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCERV 626
RPR C+LCRECIR E+WEK V++RRVK+HFIF IESTGALPPEVLFTEAVKILE+KCE
Sbjct: 303 RPRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTGALPPEVLFTEAVKILEEKCENA 362
Query: 625 IS 620
++
Sbjct: 363 MA 364
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 513 bits (1321), Expect = e-142
Identities = 258/368 (70%), Positives = 304/368 (82%), Gaps = 2/368 (0%)
Frame = -2
Query: 1708 LDMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFK 1529
+++ DVP +L PHLEL +TRV+C+ DAP T+++ YSGAYA++GVDNSVRL+ F FK
Sbjct: 24 MNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCRNFK 82
Query: 1528 VEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRL 1349
VEV +LT+DD+EFDMIGID SLANAFRRILIAEVPTMAIE+V ANNTS+IQDEVL+HRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 1348 GLIPIKADPKLFEYMSE-NDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQ 1172
GLIPI ADP LFEY NEKNTIVFK+HV+C++ R+ VKSD+LKWLPNGS+
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRIIVKSDELKWLPNGSD-- 200
Query: 1171 LAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAV 992
L SFSCSQ SLPEFS + P + DII+AKLGPGQEIELE HAV
Sbjct: 201 LIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKRPLGPTYPDIILAKLGPGQEIELEVHAV 260
Query: 991 KGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVT 812
KGVGKTHAKWSPVATAWYRMLPEVVL+++V+DE A+ELV KCPVNVFDIED+GKGR+R T
Sbjct: 261 KGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADELVTKCPVNVFDIEDIGKGRKRAT 320
Query: 811 VARPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 635
V +PRACTLCRECIR G++WE RV+LRRVK+HFIFTIESTGA+PP+VLFT+AVKILEDKC
Sbjct: 321 VVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKC 380
Query: 634 ERVISDLS 611
ERVI++LS
Sbjct: 381 ERVITELS 388
>ref|XP_007020447.1| RNA polymerase I subunit 43 isoform 4 [Theobroma cacao]
gi|508720075|gb|EOY11972.1| RNA polymerase I subunit 43
isoform 4 [Theobroma cacao]
Length = 323
Score = 511 bits (1317), Expect = e-142
Identities = 252/323 (78%), Positives = 282/323 (87%)
Frame = -2
Query: 1579 MGVDNSVRLEDFVMKFKVEVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVL 1400
MGVDNS+RL+ F F+VEV+RLTE+DMEFDMIGIDA++ANAFRRILIAE+PTMAIEKVL
Sbjct: 1 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 60
Query: 1399 FANNTSVIQDEVLAHRLGLIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMT 1220
ANNTSV+QDEVLAHRLGLIPI DP+LFEYMSEND PNEKNTIVFK+HV CKR S R+T
Sbjct: 61 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 120
Query: 1219 VKSDQLKWLPNGSEFQLAXXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIV 1040
VKSD+LKWLPNGSE SFSCSQ +LPEF++N IAPK+ DII+
Sbjct: 121 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 180
Query: 1039 AKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPV 860
+KLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+EVED+ AE L KCPV
Sbjct: 181 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 240
Query: 859 NVFDIEDVGKGRRRVTVARPRACTLCRECIRGEDWEKRVALRRVKNHFIFTIESTGALPP 680
NVFDIED+GKG++R TVARPRACTLCRECIR E+WEKRVA+ RVK+HFIFTIESTGALPP
Sbjct: 241 NVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPP 300
Query: 679 EVLFTEAVKILEDKCERVISDLS 611
EVLFTEAVKILEDKCERVI++LS
Sbjct: 301 EVLFTEAVKILEDKCERVITELS 323
>ref|XP_007205309.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
gi|462400951|gb|EMJ06508.1| hypothetical protein
PRUPE_ppa006811mg [Prunus persica]
Length = 394
Score = 507 bits (1306), Expect = e-141
Identities = 253/366 (69%), Positives = 304/366 (83%), Gaps = 1/366 (0%)
Frame = -2
Query: 1705 DMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFKV 1526
++ DVPMG+LP ++E QRTRV C +DAP T++ QYSGAY+SM V+NS L++F F+V
Sbjct: 31 NLSDVPMGRLPSNIEFQRTRVDCKADAPIHTDTFQYSGAYSSMRVENSF-LDNFCDNFRV 89
Query: 1525 EVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRLG 1346
EVIRLTED+MEFDMIGID +LANAFRRILI+EVPTMAIEKVL ANNTSVIQDEVLAHRLG
Sbjct: 90 EVIRLTEDEMEFDMIGIDPALANAFRRILISEVPTMAIEKVLIANNTSVIQDEVLAHRLG 149
Query: 1345 LIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQLA 1166
LIPIKADP+LFEY +EN+T +EKNTIVFK+HV C+R +R++VKS +L WLPNGSEF L
Sbjct: 150 LIPIKADPRLFEY-AENNTASEKNTIVFKLHVCCERSGQRLSVKSKELIWLPNGSEFPLE 208
Query: 1165 XXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAVKG 986
SF+CSQ SLPEFS N IAP DI++A+LGPGQEIELEAHAVKG
Sbjct: 209 SQDSKTGSSSKPKTYTSFTCSQDSLPEFSSNPIAPALGDILIARLGPGQEIELEAHAVKG 268
Query: 985 VGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVTVA 806
+GKTH+KWSPV WY+MLPE+VLL+++ED++AE+LV CPV VFDIED+GKG++R TVA
Sbjct: 269 IGKTHSKWSPVTPVWYKMLPEIVLLEDIEDQQAEKLVAICPVKVFDIEDIGKGKKRATVA 328
Query: 805 RPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 629
RPRACTLCRECIR G+ WE ++L+R K+HFIFTIES+G PPEVL TEAVKILE+KC+R
Sbjct: 329 RPRACTLCRECIREGKGWENAISLQRKKDHFIFTIESSGVFPPEVLVTEAVKILEEKCDR 388
Query: 628 VISDLS 611
VISDLS
Sbjct: 389 VISDLS 394
>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
subsp. lyrata]
Length = 385
Score = 506 bits (1302), Expect = e-140
Identities = 259/366 (70%), Positives = 293/366 (80%), Gaps = 1/366 (0%)
Frame = -2
Query: 1705 DMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFKV 1526
D+PDVP G LPPHLELQRTR +C +DAP SV YSGAYASMGVDNSVRLE+F FKV
Sbjct: 25 DLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDFKV 83
Query: 1525 EVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRLG 1346
+VI LTE M FDMIG+ A +ANAFRRIL+AE+P+MAIEKV ANNTSVIQDEVLAHRLG
Sbjct: 84 DVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHRLG 143
Query: 1345 LIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQLA 1166
LIPI ADP+LFEY+SEND PNEKNTIVFK+HV+C + R V + +LKWLPNGSE
Sbjct: 144 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWLPNGSEL--- 200
Query: 1165 XXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAVKG 986
SFS SQ S P F+ N I P +DI++AKLGPGQEIELEAHAVKG
Sbjct: 201 -VKESGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEAHAVKG 259
Query: 985 VGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVTVA 806
+GKTHAKWSPVATAWYRMLPEV+LL+E E + AEELVK CP VFDIED+G+GR+R TVA
Sbjct: 260 IGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVA 319
Query: 805 RPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 629
RPR C+LCRECIR G +W K+V LRRVKNHFIFTIESTG+ PP+VLF EAVKILEDKCER
Sbjct: 320 RPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILEDKCER 379
Query: 628 VISDLS 611
VIS+LS
Sbjct: 380 VISELS 385
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 505 bits (1300), Expect = e-140
Identities = 256/366 (69%), Positives = 293/366 (80%), Gaps = 1/366 (0%)
Frame = -2
Query: 1705 DMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFKV 1526
++ DV GQLPPH+ Q TRV C DAPT TE++QYSG+YASMGVDNS+RL+ F F++
Sbjct: 30 NLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRI 89
Query: 1525 EVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRLG 1346
+VI L +D MEFDMIGIDA++ANAFRRILI+EVPTMAIEKV ANNTSVIQDEVLAHRLG
Sbjct: 90 KVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRLG 149
Query: 1345 LIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQLA 1166
LIPIK DP+LFEY+S NDTPNEKNTIV K+H +C R R +V S +LKWLPNGSEF
Sbjct: 150 LIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQELKWLPNGSEF--- 206
Query: 1165 XXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAVKG 986
SFSC Q SLPEF+ N I+ EDII+AKLGPGQEIELEAHAVKG
Sbjct: 207 -AKESEKPDSKPSTYTSFSCGQDSLPEFAGNPISTV-EDIILAKLGPGQEIELEAHAVKG 264
Query: 985 VGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVTVA 806
+GKTHAKWSPV TAWYRM PEVVLL+ ++ E AEEL++KCP VFDIED G +++ VA
Sbjct: 265 MGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDIEDTGNAKKKAIVA 324
Query: 805 RPRACTLCRECIRG-EDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 629
RACTLCRECIRG E+WEKRVAL RVK+HFIFTIESTGALPPEVLFTEAVKILE KCER
Sbjct: 325 DSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFTEAVKILEAKCER 384
Query: 628 VISDLS 611
VI++LS
Sbjct: 385 VITELS 390
>ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thaliana]
gi|14423464|gb|AAK62414.1|AF386969_1 RNA polymerase
subunit (isoform B) [Arabidopsis thaliana]
gi|514324|gb|AAB00529.1| RNA polymerase subunit
[Arabidopsis thaliana] gi|2462755|gb|AAB71974.1| RNA
polymerase subunit (isoform B) [Arabidopsis thaliana]
gi|24899667|gb|AAN65048.1| RNA polymerase subunit
(isoform B) [Arabidopsis thaliana]
gi|332195585|gb|AEE33706.1| RNA polymerase I subunit 43
[Arabidopsis thaliana] gi|1586550|prf||2204246B RNA
polymerase
Length = 385
Score = 503 bits (1296), Expect = e-140
Identities = 257/366 (70%), Positives = 295/366 (80%), Gaps = 1/366 (0%)
Frame = -2
Query: 1705 DMPDVPMGQLPPHLELQRTRVLCASDAPTQTESVQYSGAYASMGVDNSVRLEDFVMKFKV 1526
D+PDVP G LPPHLELQRTRV+C D+ ++ +SGAY+SMGVDNSVRLE+F FKV
Sbjct: 25 DLPDVPTG-LPPHLELQRTRVVCKKDSNIHPTAITFSGAYSSMGVDNSVRLENFSEDFKV 83
Query: 1525 EVIRLTEDDMEFDMIGIDASLANAFRRILIAEVPTMAIEKVLFANNTSVIQDEVLAHRLG 1346
+VI LTE DM FDMIG+ A +ANAFRRIL+AE+P+MAIEKV ANNTSVIQDEVLAHRLG
Sbjct: 84 DVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYVANNTSVIQDEVLAHRLG 143
Query: 1345 LIPIKADPKLFEYMSENDTPNEKNTIVFKMHVQCKRDSRRMTVKSDQLKWLPNGSEFQLA 1166
LIPI ADP+LFEY+SEND PNEKNTIVFK+HV+C + R V + +LKWLPNGSE
Sbjct: 144 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKVLTSELKWLPNGSEL--- 200
Query: 1165 XXXXXXXXXXXXXXXXSFSCSQASLPEFSDNSIAPKHEDIIVAKLGPGQEIELEAHAVKG 986
SF+ SQ S PEF++N I P +DI++AKLGPGQEIELEAHAVKG
Sbjct: 201 -IKESGGSTTTPKTYTSFNHSQDSFPEFAENPIRPTLKDILIAKLGPGQEIELEAHAVKG 259
Query: 985 VGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKAEELVKKCPVNVFDIEDVGKGRRRVTVA 806
+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEELVK CP VFDIED+G+GR+R TVA
Sbjct: 260 IGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVA 319
Query: 805 RPRACTLCRECIR-GEDWEKRVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 629
RPR C+LCRECIR G +WE +V LRRVKNHFIFTIESTG+ PPEVLF EAVKILEDKCER
Sbjct: 320 RPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAVKILEDKCER 379
Query: 628 VISDLS 611
VIS+LS
Sbjct: 380 VISELS 385