BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00015425
         (917 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]      65   5e-08
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...    64   1e-07
ref|XP_007218906.1| hypothetical protein PRUPE_ppa000560mg [Prun...    60   9e-07
ref|XP_007143396.1| hypothetical protein PHAVU_007G069100g [Phas...    59   3e-06
ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [A...    57   8e-06
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...    57   8e-06

>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
          Length = 1080

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 42/112 (37%), Positives = 60/112 (53%)
 Frame = +1

Query: 1    DKSFGLNVARLAQLPSKCIAQAAAMSMKLEALISIRAATRLAQLHTLRRGYECCHGGMGG 180
            +KSFG  VA LAQLPS CI +A  M+ +LE ++S R+A +  ++H L     C       
Sbjct: 973  EKSFGFKVAELAQLPSSCINRAVTMASRLEMVVSNRSANKCGKMHLLETSSLCQKD---- 1028

Query: 181  CSLVEATKGTGKLNNAYYELFLILKSALVNTDAAPTTLQSLKCASSLAAEIL 336
               +     + K  + Y E FLILK+AL + D    +LQ L  A  LA E++
Sbjct: 1029 -EKMTLEMESSKCLDGYKEFFLILKNAL-SVDDHAKSLQLLNQARGLANELI 1078


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 49/112 (43%), Positives = 63/112 (56%)
 Frame = +1

Query: 1    DKSFGLNVARLAQLPSKCIAQAAAMSMKLEALISIRAATRLAQLHTLRRGYECCHGGMGG 180
            ++SFG  VA+LAQLPS CI +A  M+ +LEA+I  R     AQ  TL +G +       G
Sbjct: 1004 ERSFGFKVAQLAQLPSSCIRRANVMAAELEAMIVSRVKNSSAQ-KTL-QGSQQSISIQSG 1061

Query: 181  CSLVEATKGTGKLNNAYYELFLILKSALVNTDAAPTTLQSLKCASSLAAEIL 336
            CS  E     G   +A  E FL LKSAL N D    +LQ LK A S+A E++
Sbjct: 1062 CSRAEQ---IGLEEDACREFFLDLKSALGNAD-PERSLQFLKHARSIAKELI 1109


>ref|XP_007218906.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
            gi|462415368|gb|EMJ20105.1| hypothetical protein
            PRUPE_ppa000560mg [Prunus persica]
          Length = 1096

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
 Frame = +1

Query: 1    DKSFGLNVARLAQLPSKCIAQAAAMSMKLEALISIRAATR------LAQLHT-------- 138
            ++SFG  VA LAQLPS CI QA  M+ +LEA+++ RA  R      L  L T        
Sbjct: 975  ERSFGFKVAELAQLPSSCIRQATIMAARLEAVVNSRARNRHGKNWLLKSLVTDQKKEAQD 1034

Query: 139  -LRRGYECCHGGMGGCSLVEATKGTGKLNNAYYELFLILKSALVNTDAAPTTLQSLKCAS 315
             +    EC   G     ++E T G      AY + F+ LK+A+++ D    + Q L  A 
Sbjct: 1035 EMLESPECLREGWS--PVLEETNG-----GAYQKFFINLKAAIIDVDDPVKSCQYLNHAR 1087

Query: 316  SLAAEIL 336
            S+A E++
Sbjct: 1088 SIARELI 1094


>ref|XP_007143396.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
            gi|561016586|gb|ESW15390.1| hypothetical protein
            PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 1075

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = +1

Query: 1    DKSFGLNVARLAQLPSKCIAQAAAMSMKLEALISIRAATRLAQ---LHTLRRGYECCHGG 171
            D+SFG  VA+LAQLPS CI++A  M+ KLEAL++ R  +R  +   L TL  G E     
Sbjct: 965  DRSFGFKVAQLAQLPSHCISRALVMASKLEALVNSRIHSRSGKELLLDTLVIGQE----- 1019

Query: 172  MGGCSLVEATKGTGKLNNAYYELFLILKSALVNTDAAPTTLQSLKCASSLAAEIL 336
               C      +   +   AY + +L LK+A+ + D A  +   LK A S+A +++
Sbjct: 1020 QEQCMAQPHDRPLQEFGIAYKDFYLNLKAAIQDDDCA-KSFHLLKHARSIAKKLI 1073


>ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [Amborella trichopoda]
            gi|548832331|gb|ERM95127.1| hypothetical protein
            AMTR_s00009p00259730 [Amborella trichopoda]
          Length = 1092

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1    DKSFGLNVARLAQLPSKCIAQAAAMSMKLEALISIRAATRLAQLHTLRRGYECCHGGMGG 180
            DKSFGLNVA LAQLP+ CIA+AA M+ KLE+ +  R   RL+             G +  
Sbjct: 987  DKSFGLNVAGLAQLPASCIARAAVMAAKLESDVCSRLKNRLS-------------GNIQR 1033

Query: 181  CSLVEAT--KGTGKLNNAYYELFLILKSALVNTDAAPTTLQSLKCASSLAAEILKGHS 348
             S+++ +     G     Y E+F +L ++L+++D +   L SLK     A EI    +
Sbjct: 1034 VSVIDHSPFDEHGVREKEYLEVFSLLWNSLLDSDPS-NCLHSLKDIQKHALEIFSSEN 1090


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
 Frame = +1

Query: 1    DKSFGLNVARLAQLPSKCIAQAAAMSMKLEALISIRAATRL--------AQLHTLRRGYE 156
            ++SFG  VA+LAQLP+ CI +A  M+ +LE  IS R   RL         Q+  L+   E
Sbjct: 982  ERSFGFKVAQLAQLPTSCIERATVMAARLEEAISCRIRNRLDKSQLLKALQIDQLQEIQE 1041

Query: 157  CCHGGMGGCSLVEATKGTGKLNNAYYELFLILKSALVNTDAAPTTLQSLKCASSLAAEIL 336
                  G     +  +   +LNN Y + FL  KSAL+  DA   + Q L+ A S+A  ++
Sbjct: 1042 KIPESPGNFH-DKRIENYEELNNTYEKFFLNFKSALLGDDA--KSFQYLENARSIARALI 1098

Query: 337  K 339
            K
Sbjct: 1099 K 1099