BLASTX nr result

ID: Cocculus23_contig00015302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00015302
         (230 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycin...    58   2e-06
ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycin...    56   5e-06
ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus...    56   5e-06
ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloro...    55   8e-06
ref|XP_007021565.1| 30S ribosomal protein S20 isoform 3 [Theobro...    55   8e-06
ref|XP_007021563.1| 30S ribosomal protein S20 isoform 1 [Theobro...    55   8e-06
ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...    55   8e-06

>ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycine max]
           gi|255625577|gb|ACU13133.1| unknown [Glycine max]
          Length = 180

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -2

Query: 229 TGANRKSRLARRKKSVEIHHGWYTPA 152
           TGANRKSRLARRKK+VEIHHGWYTPA
Sbjct: 150 TGANRKSRLARRKKAVEIHHGWYTPA 175


>ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycine max]
           gi|255640470|gb|ACU20521.1| unknown [Glycine max]
          Length = 164

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -2

Query: 229 TGANRKSRLARRKKSVEIHHGWYTP 155
           TGANRKSRLARRKK+VEIHHGWYTP
Sbjct: 134 TGANRKSRLARRKKAVEIHHGWYTP 158


>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
           gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 185

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -2

Query: 229 TGANRKSRLARRKKSVEIHHGWYTPAAVTA 140
           TGA RKSRLARRKK+VEIHHGWYTPA   A
Sbjct: 153 TGARRKSRLARRKKAVEIHHGWYTPAPAEA 182


>ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
           tuberosum]
          Length = 184

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = -2

Query: 229 TGANRKSRLARRKKSVEIHHGWYTPAAVT 143
           TGA RKSRLARRKK+VEIHHGWY P A T
Sbjct: 148 TGARRKSRLARRKKAVEIHHGWYVPVAAT 176


>ref|XP_007021565.1| 30S ribosomal protein S20 isoform 3 [Theobroma cacao]
           gi|508721193|gb|EOY13090.1| 30S ribosomal protein S20
           isoform 3 [Theobroma cacao]
          Length = 186

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -2

Query: 229 TGANRKSRLARRKKSVEIHHGWYTPA 152
           TGA RKSRLARRKK+VEIHHGWYTPA
Sbjct: 155 TGARRKSRLARRKKAVEIHHGWYTPA 180


>ref|XP_007021563.1| 30S ribosomal protein S20 isoform 1 [Theobroma cacao]
           gi|508721191|gb|EOY13088.1| 30S ribosomal protein S20
           isoform 1 [Theobroma cacao]
          Length = 193

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -2

Query: 229 TGANRKSRLARRKKSVEIHHGWYTPA 152
           TGA RKSRLARRKK+VEIHHGWYTPA
Sbjct: 162 TGARRKSRLARRKKAVEIHHGWYTPA 187


>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -2

Query: 229 TGANRKSRLARRKKSVEIHHGWYTPA 152
           TGA RKSRLARRKK+VEIHHGWYTPA
Sbjct: 153 TGARRKSRLARRKKAVEIHHGWYTPA 178


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