BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00015262
         (266 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246415.1| PREDICTED: ribulose bisphosphate carboxylase...   171   1e-40
gb|AGL08672.1| chloroplast rubisco activase 1 [Sagittaria gramin...   171   1e-40
gb|AFU50383.1| chloroplast ribulose bisphosphate carboxylase/oxy...   169   4e-40
gb|AFU50382.1| chloroplast ribulose bisphosphate carboxylase/oxy...   169   4e-40
gb|AFU50380.1| chloroplast ribulose bisphosphate carboxylase/oxy...   169   4e-40
ref|XP_004980087.1| PREDICTED: ribulose bisphosphate carboxylase...   168   6e-40
prf||1909374A RuBisCO activase                                        168   8e-40
gb|AFB70995.1| ribulose bisphosphate carboxylase/oxygenase activ...   168   8e-40
ref|XP_006339015.1| PREDICTED: ribulose bisphosphate carboxylase...   168   8e-40
ref|XP_006339014.1| PREDICTED: ribulose bisphosphate carboxylase...   168   8e-40
sp|Q40460.1|RCA1_TOBAC RecName: Full=Ribulose bisphosphate carbo...   168   8e-40
gb|AFB70996.1| ribulose bisphosphate carboxylase/oxygenase activ...   167   1e-39
gb|ACB05667.1| chloroplast rubisco activase [Capsicum annuum]         167   1e-39
ref|XP_007009268.1| Rubisco activase isoform 2 [Theobroma cacao]...   166   2e-39
ref|XP_007009267.1| Ribulose bisphosphate carboxylase/oxygenase ...   166   2e-39
ref|XP_003577196.1| PREDICTED: ribulose bisphosphate carboxylase...   166   2e-39
sp|Q40565.1|RCA2_TOBAC RecName: Full=Ribulose bisphosphate carbo...   166   3e-39
gb|AFB70997.1| ribulose bisphosphate carboxylase/oxygenase activ...   166   3e-39
gb|AFD97617.1| rubisco activase (chloroplast) [Ammopiptanthus mo...   166   3e-39
ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase ...   166   4e-39

>ref|XP_004246415.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Solanum lycopersicum]
          Length = 441

 Score =  171 bits (433), Expect = 1e-40
 Identities = 77/88 (87%), Positives = 86/88 (97%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH A+++SYEYLSQGLR+YN+DNKLDGFYIAPAFMDKLVVH+ KNF+TLPNIK+PLILG
Sbjct: 106 GTHHAIMNSYEYLSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILG 165

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           VWGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 166 VWGGKGQGKSFQCELVFRKMGINPIMMS 193


>gb|AGL08672.1| chloroplast rubisco activase 1 [Sagittaria graminea]
           gi|488888874|gb|AGL08674.1| chloroplast rubisco activase
           1 [Sagittaria graminea]
          Length = 440

 Score =  171 bits (432), Expect = 1e-40
 Identities = 78/88 (88%), Positives = 85/88 (96%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVLSSYEY+SQGLREY +DNK+DGFYIAPAFMDKLVVH+AKNFM LPNIK+PLILG
Sbjct: 106 GTHHAVLSSYEYISQGLREYGLDNKMDGFYIAPAFMDKLVVHIAKNFMELPNIKVPLILG 165

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 166 IWGGKGQGKSFQCELVFRKMGINPIMMS 193


>gb|AFU50383.1| chloroplast ribulose bisphosphate carboxylase/oxygenase activase
           large isoform b [Ipomoea batatas]
          Length = 484

 Score =  169 bits (428), Expect = 4e-40
 Identities = 79/88 (89%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVLSSYEY+SQGLREYN+DN LDGFYIAPAFMDKLVVH+ KNF+ LPNIKIPLILG
Sbjct: 113 GTHHAVLSSYEYISQGLREYNIDNTLDGFYIAPAFMDKLVVHITKNFLKLPNIKIPLILG 172

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           VWGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 173 VWGGKGQGKSFQCELVFRKMGINPIMMS 200


>gb|AFU50382.1| chloroplast ribulose bisphosphate carboxylase/oxygenase activase
           large isoform a [Ipomoea batatas]
          Length = 484

 Score =  169 bits (428), Expect = 4e-40
 Identities = 79/88 (89%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVLSSYEY+SQGLREYN+DN LDGFYIAPAFMDKLVVH+ KNF+ LPNIKIPLILG
Sbjct: 113 GTHHAVLSSYEYISQGLREYNIDNTLDGFYIAPAFMDKLVVHITKNFLKLPNIKIPLILG 172

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           VWGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 173 VWGGKGQGKSFQCELVFRKMGINPIMMS 200


>gb|AFU50380.1| chloroplast ribulose bisphosphate carboxylase/oxygenase activase
           large isoform [Ipomoea batatas]
           gi|407911672|gb|AFU50384.1| chloroplast ribulose
           bisphosphate carboxylase/oxygenase activase large
           isoform c [Ipomoea batatas]
          Length = 484

 Score =  169 bits (428), Expect = 4e-40
 Identities = 79/88 (89%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVLSSYEY+SQGLREYN+DN LDGFYIAPAFMDKLVVH+ KNF+ LPNIKIPLILG
Sbjct: 113 GTHHAVLSSYEYISQGLREYNIDNTLDGFYIAPAFMDKLVVHITKNFLKLPNIKIPLILG 172

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           VWGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 173 VWGGKGQGKSFQCELVFRKMGINPIMMS 200


>ref|XP_004980087.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Setaria italica]
          Length = 473

 Score =  168 bits (426), Expect = 6e-40
 Identities = 75/88 (85%), Positives = 86/88 (97%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH+AVLSSYEYLSQGLR+YN+DN +DG+YIAPAFMDKLVVH+AKNFM+LPNIK+PLILG
Sbjct: 101 GTHEAVLSSYEYLSQGLRQYNLDNMMDGYYIAPAFMDKLVVHIAKNFMSLPNIKVPLILG 160

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVF K+GINP+MMS
Sbjct: 161 IWGGKGQGKSFQCELVFAKMGINPVMMS 188


>prf||1909374A RuBisCO activase
          Length = 383

 Score =  168 bits (425), Expect = 8e-40
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVL SYEY+SQGLR+YN+DNKLDGFYIAPAFMDKLVVH+ KNF+ LPNIK+PLILG
Sbjct: 48  GTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILG 107

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 108 IWGGKGQGKSFQCELVFRKMGINPIMMS 135


>gb|AFB70995.1| ribulose bisphosphate carboxylase/oxygenase activase 1
           (chloroplast) [Nicotiana attenuata]
          Length = 442

 Score =  168 bits (425), Expect = 8e-40
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVL SYEY+SQGLR+YN+DNKLDGFYIAPAFMDKLVVH+ KNF+ LPNIK+PLILG
Sbjct: 107 GTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILG 166

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 167 IWGGKGQGKSFQCELVFRKMGINPIMMS 194


>ref|XP_006339015.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 436

 Score =  168 bits (425), Expect = 8e-40
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH  VLSSYEY+SQGLR+YN+DN LDGFYIAPAFMDKLVVH+ KNF+TLPNIK+PLILG
Sbjct: 104 GTHHPVLSSYEYISQGLRQYNLDNTLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILG 163

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 164 IWGGKGQGKSFQCELVFRKMGINPIMMS 191


>ref|XP_006339014.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 438

 Score =  168 bits (425), Expect = 8e-40
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH  VLSSYEY+SQGLR+YN+DN LDGFYIAPAFMDKLVVH+ KNF+TLPNIK+PLILG
Sbjct: 106 GTHHPVLSSYEYISQGLRQYNLDNTLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILG 165

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 166 IWGGKGQGKSFQCELVFRKMGINPIMMS 193


>sp|Q40460.1|RCA1_TOBAC RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase
           1, chloroplastic; Short=RA 1; Short=RuBisCO activase 1;
           Flags: Precursor gi|1006835|gb|AAA78277.1| rubisco
           activase precursor [Nicotiana tabacum]
          Length = 442

 Score =  168 bits (425), Expect = 8e-40
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVL SYEY+SQGLR+YN+DNKLDGFYIAPAFMDKLVVH+ KNF+ LPNIK+PLILG
Sbjct: 107 GTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILG 166

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 167 IWGGKGQGKSFQCELVFRKMGINPIMMS 194


>gb|AFB70996.1| ribulose bisphosphate carboxylase/oxygenase activase 2
           (chloroplast) [Nicotiana attenuata]
          Length = 439

 Score =  167 bits (423), Expect = 1e-39
 Identities = 77/88 (87%), Positives = 83/88 (94%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVL SYEY+SQGLR+YNMDN LDGFYIAPAFMDKLVVH+ KNF+ LPNIK+PLILG
Sbjct: 107 GTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILG 166

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           VWGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 167 VWGGKGQGKSFQCELVFRKMGINPIMMS 194


>gb|ACB05667.1| chloroplast rubisco activase [Capsicum annuum]
          Length = 439

 Score =  167 bits (423), Expect = 1e-39
 Identities = 76/88 (86%), Positives = 85/88 (96%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH A+++SYEYLSQGL++Y+MDNKLDGFYIAPAFMDKLVVH+ KNF+ LPNIKIPLILG
Sbjct: 107 GTHHAIMNSYEYLSQGLKQYSMDNKLDGFYIAPAFMDKLVVHITKNFLQLPNIKIPLILG 166

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           VWGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 167 VWGGKGQGKSFQCELVFRKMGINPIMMS 194


>ref|XP_007009268.1| Rubisco activase isoform 2 [Theobroma cacao]
           gi|508726181|gb|EOY18078.1| Rubisco activase isoform 2
           [Theobroma cacao]
          Length = 476

 Score =  166 bits (421), Expect = 2e-39
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AV+SSYEYLSQGLR YN+DN +DGFYIAPAFMDKLVVH++KNFMTLPNIK+PLILG
Sbjct: 106 GTHYAVMSSYEYLSQGLRTYNLDNNVDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILG 165

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVF K+GINPIMMS
Sbjct: 166 IWGGKGQGKSFQCELVFAKMGINPIMMS 193


>ref|XP_007009267.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           isoform 1 [Theobroma cacao] gi|508726180|gb|EOY18077.1|
           Ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic isoform 1 [Theobroma cacao]
          Length = 440

 Score =  166 bits (421), Expect = 2e-39
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AV+SSYEYLSQGLR YN+DN +DGFYIAPAFMDKLVVH++KNFMTLPNIK+PLILG
Sbjct: 106 GTHYAVMSSYEYLSQGLRTYNLDNNVDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILG 165

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVF K+GINPIMMS
Sbjct: 166 IWGGKGQGKSFQCELVFAKMGINPIMMS 193


>ref|XP_003577196.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase B,
           chloroplastic-like [Brachypodium distachyon]
          Length = 440

 Score =  166 bits (421), Expect = 2e-39
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH+AVLSSYEY+SQGLR+Y+ DN +DG YIAPAFMDKLVVHLAKNFMTLPNIK+PLILG
Sbjct: 103 GTHEAVLSSYEYISQGLRQYDFDNTMDGLYIAPAFMDKLVVHLAKNFMTLPNIKVPLILG 162

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVF K+GINPIMMS
Sbjct: 163 IWGGKGQGKSFQCELVFAKMGINPIMMS 190


>sp|Q40565.1|RCA2_TOBAC RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase
           2, chloroplastic; Short=RA 2; Short=RuBisCO activase 2;
           Flags: Precursor gi|19990|emb|CAA78703.1| ribulose
           bisphosphate carboxylase activase [Nicotiana tabacum]
          Length = 439

 Score =  166 bits (420), Expect = 3e-39
 Identities = 76/88 (86%), Positives = 83/88 (94%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVL SYEY+SQGLR+YNMDN LDGFYIAP+FMDKLVVH+ KNF+ LPNIK+PLILG
Sbjct: 107 GTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILG 166

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           VWGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 167 VWGGKGQGKSFQCELVFRKMGINPIMMS 194


>gb|AFB70997.1| ribulose bisphosphate carboxylase/oxygenase activase [Nicotiana
           attenuata]
          Length = 439

 Score =  166 bits (420), Expect = 3e-39
 Identities = 75/88 (85%), Positives = 83/88 (94%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVL SYEY+SQGLR+YN+DN LDGFYIAPAFMDKLVVH+ KNF+ LPNIK+PLILG
Sbjct: 107 GTHHAVLQSYEYISQGLRQYNLDNTLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILG 166

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVFRK+GINPIMMS
Sbjct: 167 IWGGKGQGKSFQCELVFRKMGINPIMMS 194


>gb|AFD97617.1| rubisco activase (chloroplast) [Ammopiptanthus mongolicus]
          Length = 439

 Score =  166 bits (420), Expect = 3e-39
 Identities = 76/88 (86%), Positives = 83/88 (94%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AVLSSYEY+S GLREYN+DN +DGFYIAPAFMDKLVVH+ KNFMTLPNIK+PLILG
Sbjct: 105 GTHYAVLSSYEYISTGLREYNLDNNVDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILG 164

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVF K+GINPIMMS
Sbjct: 165 IWGGKGQGKSFQCELVFAKMGINPIMMS 192


>ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
           precursor, putative [Ricinus communis]
           gi|223536483|gb|EEF38130.1| Ribulose bisphosphate
           carboxylase/oxygenase activase 1, chloroplast precursor,
           putative [Ricinus communis]
          Length = 473

 Score =  166 bits (419), Expect = 4e-39
 Identities = 76/88 (86%), Positives = 83/88 (94%)
 Frame = +3

Query: 3   GTHDAVLSSYEYLSQGLREYNMDNKLDGFYIAPAFMDKLVVHLAKNFMTLPNIKIPLILG 182
           GTH AV+SSYEYLS GLR+YN+DN +DGFYIAPAFMDKLVVH+ KNFMTLPNIKIPLILG
Sbjct: 102 GTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILG 161

Query: 183 VWGGKGQGKSFQCELVFRKLGINPIMMS 266
           +WGGKGQGKSFQCELVF K+GINPIMMS
Sbjct: 162 IWGGKGQGKSFQCELVFAKMGINPIMMS 189