BLASTX nr result
ID: Cocculus23_contig00015075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00015075
(394 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007218796.1| hypothetical protein PRUPE_ppa009799mg [Prun... 103 3e-20
gb|EYU39873.1| hypothetical protein MIMGU_mgv1a011311mg [Mimulus... 100 2e-19
emb|CBI30155.3| unnamed protein product [Vitis vinifera] 100 3e-19
gb|EXB96179.1| Glycine-rich RNA-binding, abscisic acid-inducible... 96 5e-18
ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein ... 96 5e-18
ref|XP_006436516.1| hypothetical protein CICLE_v100325201mg [Cit... 96 5e-18
ref|XP_006436514.1| hypothetical protein CICLE_v100325201mg [Cit... 96 5e-18
ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207... 95 9e-18
ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Popu... 93 4e-17
ref|XP_002315330.1| glycine-rich RNA-binding family protein [Pop... 91 1e-16
ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [... 90 3e-16
ref|XP_006392135.1| hypothetical protein EUTSA_v10023624mg [Eutr... 88 1e-15
ref|XP_007010019.1| RNA-binding family protein with retrovirus z... 88 1e-15
ref|XP_007010018.1| RNA-binding family protein with retrovirus z... 88 1e-15
ref|XP_004307343.1| PREDICTED: uncharacterized protein LOC101306... 88 1e-15
ref|XP_006364447.1| PREDICTED: TATA-binding protein-associated f... 87 2e-15
ref|XP_006364446.1| PREDICTED: TATA-binding protein-associated f... 87 2e-15
ref|XP_004234911.1| PREDICTED: uncharacterized protein LOC101261... 87 2e-15
ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202... 86 4e-15
ref|XP_006288277.1| hypothetical protein CARUB_v10001522mg [Caps... 85 1e-14
>ref|XP_007218796.1| hypothetical protein PRUPE_ppa009799mg [Prunus persica]
gi|462415258|gb|EMJ19995.1| hypothetical protein
PRUPE_ppa009799mg [Prunus persica]
Length = 277
Score = 103 bits (256), Expect = 3e-20
Identities = 50/89 (56%), Positives = 54/89 (60%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF D RAMEDAIREMHGRELGDR+ISVNKAQPKM
Sbjct: 50 FGFITFGDRRAMEDAIREMHGRELGDRIISVNKAQPKMGGGGEDLDHGYRGGYSTGGRRN 109
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGRPGHWAR+CPSA
Sbjct: 110 YGGGDRPVGQDECFKCGRPGHWARDCPSA 138
>gb|EYU39873.1| hypothetical protein MIMGU_mgv1a011311mg [Mimulus guttatus]
Length = 286
Score = 100 bits (250), Expect = 2e-19
Identities = 50/89 (56%), Positives = 55/89 (61%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D RAM+DAIR+MHGRELGDRVISVNKAQPKM
Sbjct: 51 FGFLTFADRRAMDDAIRDMHGRELGDRVISVNKAQPKMGGEDSGPGYGSYSSGGRGSNYG 110
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
DCFKCGRPGHWAR+CPSA
Sbjct: 111 GGGDNRSAGPDDCFKCGRPGHWARDCPSA 139
>emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 100 bits (248), Expect = 3e-19
Identities = 50/88 (56%), Positives = 53/88 (60%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+DHRAMEDAIREMHGREL RVISVNKAQPKM
Sbjct: 50 FGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPKMGSEDSGYGYGGRDRMLGGRDSY 109
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPS 129
DCFKCGRPGHWAR+CPS
Sbjct: 110 RGVDKPVGRSDDCFKCGRPGHWARDCPS 137
>gb|EXB96179.1| Glycine-rich RNA-binding, abscisic acid-inducible protein [Morus
notabilis]
Length = 275
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/89 (55%), Positives = 52/89 (58%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF D R MEDAIREMHGRE GDR+ISVNKAQPKM
Sbjct: 50 FGFITFGDRRGMEDAIREMHGREFGDRIISVNKAQPKM--GDDDADHGYRGSYSSGGRKG 107
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
DCFKCGRPGHWAR+CPSA
Sbjct: 108 YGGGDRSVGQDDCFKCGRPGHWARDCPSA 136
>ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein 10-like isoform X1
[Citrus sinensis]
Length = 280
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/89 (55%), Positives = 54/89 (60%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+T++D RAM+DAIREMHGRE GDRVISVNKAQPKM
Sbjct: 50 FGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDHGYRGGGYSSGGRG 107
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
DCFKCGRPGHWAR+CPSA
Sbjct: 108 SYGADRPGGQDDCFKCGRPGHWARDCPSA 136
>ref|XP_006436516.1| hypothetical protein CICLE_v100325201mg [Citrus clementina]
gi|568864382|ref|XP_006485578.1| PREDICTED: glycine-rich
RNA-binding protein 10-like isoform X2 [Citrus sinensis]
gi|557538712|gb|ESR49756.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
Length = 255
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/89 (55%), Positives = 54/89 (60%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+T++D RAM+DAIREMHGRE GDRVISVNKAQPKM
Sbjct: 25 FGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDHGYRGGGYSSGGRG 82
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
DCFKCGRPGHWAR+CPSA
Sbjct: 83 SYGADRPGGQDDCFKCGRPGHWARDCPSA 111
>ref|XP_006436514.1| hypothetical protein CICLE_v100325201mg [Citrus clementina]
gi|567887986|ref|XP_006436515.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
gi|557538710|gb|ESR49754.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
gi|557538711|gb|ESR49755.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
Length = 242
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/89 (55%), Positives = 54/89 (60%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+T++D RAM+DAIREMHGRE GDRVISVNKAQPKM
Sbjct: 12 FGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDHGYRGGGYSSGGRG 69
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
DCFKCGRPGHWAR+CPSA
Sbjct: 70 SYGADRPGGQDDCFKCGRPGHWARDCPSA 98
>ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED:
uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/88 (50%), Positives = 53/88 (60%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D R M+DAIREMHG+ELG+R+ISVNKA+PKM
Sbjct: 50 FGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASF 109
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPS 129
+CFKCGRPGHWAR+CPS
Sbjct: 110 GRGKDRSVGQDECFKCGRPGHWARDCPS 137
>ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Populus trichocarpa]
gi|550332329|gb|EEE89356.2| hypothetical protein
POPTR_0008s03290g [Populus trichocarpa]
Length = 279
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/89 (52%), Positives = 53/89 (59%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D RAM+DAIREMHGR+ GDRVISVNKAQPKM
Sbjct: 50 FGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKM--GGDDSDHGYRGGYSTGSRGG 107
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGR GHWAR+CPSA
Sbjct: 108 YGGGDRPAGQDECFKCGRSGHWARDCPSA 136
>ref|XP_002315330.1| glycine-rich RNA-binding family protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 280
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D RAM+DAIREMHGR+ GDRVISVNKAQPK+
Sbjct: 50 FGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKI--GGDDSDHGYRGGYSTGSRGG 107
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGR GHWAR+CPSA
Sbjct: 108 YGGGDRPAGQDECFKCGRSGHWARDCPSA 136
>ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 276
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/89 (52%), Positives = 52/89 (58%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TFSD R+M+DAIREMHGRE GDRVISVNKAQPKM
Sbjct: 50 FGFITFSDRRSMDDAIREMHGREFGDRVISVNKAQPKM--GDDLDHGYRGGYSSSGGRGG 107
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGR GHWAR+C SA
Sbjct: 108 GYGGDRPLGQDECFKCGRIGHWARDCTSA 136
>ref|XP_006392135.1| hypothetical protein EUTSA_v10023624mg [Eutrema salsugineum]
gi|557088641|gb|ESQ29421.1| hypothetical protein
EUTSA_v10023624mg [Eutrema salsugineum]
Length = 290
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/89 (49%), Positives = 52/89 (58%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D R ++AI+ MHGRELGDRVISVNKA+PK+
Sbjct: 55 FGFITFTDRRGADNAIKHMHGRELGDRVISVNKAEPKV------GGDDVDHFHKGGGYSS 108
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGRPGHWARECPSA
Sbjct: 109 RGKGSHGGAEDECFKCGRPGHWARECPSA 137
>ref|XP_007010019.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 2 [Theobroma cacao] gi|508726932|gb|EOY18829.1|
RNA-binding family protein with retrovirus zinc
finger-like domain isoform 2 [Theobroma cacao]
Length = 265
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/89 (49%), Positives = 53/89 (59%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D R+M++AIREMHGRE G+R+ISVNKAQPKM
Sbjct: 50 FGFITFADRRSMDEAIREMHGREFGERIISVNKAQPKM----GEDLDHGYRGYSSSGRGG 105
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGR GHWAR+CPSA
Sbjct: 106 YAGGDRPVGQDECFKCGRFGHWARDCPSA 134
>ref|XP_007010018.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 1 [Theobroma cacao] gi|508726931|gb|EOY18828.1|
RNA-binding family protein with retrovirus zinc
finger-like domain isoform 1 [Theobroma cacao]
Length = 276
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/89 (49%), Positives = 53/89 (59%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D R+M++AIREMHGRE G+R+ISVNKAQPKM
Sbjct: 50 FGFITFADRRSMDEAIREMHGREFGERIISVNKAQPKM----GEDLDHGYRGYSSSGRGG 105
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGR GHWAR+CPSA
Sbjct: 106 YAGGDRPVGQDECFKCGRFGHWARDCPSA 134
>ref|XP_004307343.1| PREDICTED: uncharacterized protein LOC101306961 [Fragaria vesca
subsp. vesca]
Length = 284
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/93 (49%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKM----XXXXXXXXXXXXXXXXXX 225
FGF+TF D RAMEDAIREMHG+ELG R ISVNKAQP+M
Sbjct: 50 FGFITFGDRRAMEDAIREMHGQELGSRTISVNKAQPRMGGEDSDHGYRGGGGGGGYSSGG 109
Query: 224 XXXXXXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGR GHWAR+CPSA
Sbjct: 110 RRSYGGGGDRSVGQDECFKCGRTGHWARDCPSA 142
>ref|XP_006364447.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform
X2 [Solanum tuberosum]
Length = 266
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/87 (51%), Positives = 49/87 (56%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D RAMEDAIREM G E+GDRVISVNKAQPKM
Sbjct: 46 FGFLTFADRRAMEDAIREMDGAEVGDRVISVNKAQPKM--GSEDPDHGYGGGYVSGGRAS 103
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECP 132
CF CGRPGHWAR+CP
Sbjct: 104 YVGGNRSVGQDTCFSCGRPGHWARDCP 130
>ref|XP_006364446.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform
X1 [Solanum tuberosum]
Length = 271
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/87 (51%), Positives = 49/87 (56%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D RAMEDAIREM G E+GDRVISVNKAQPKM
Sbjct: 51 FGFLTFADRRAMEDAIREMDGAEVGDRVISVNKAQPKM--GSEDPDHGYGGGYVSGGRAS 108
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECP 132
CF CGRPGHWAR+CP
Sbjct: 109 YVGGNRSVGQDTCFSCGRPGHWARDCP 135
>ref|XP_004234911.1| PREDICTED: uncharacterized protein LOC101261205 [Solanum
lycopersicum]
Length = 271
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/87 (51%), Positives = 49/87 (56%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKMXXXXXXXXXXXXXXXXXXXXXX 213
FGF+TF+D RAMEDAIREM G E+GDRVISVNKAQPKM
Sbjct: 51 FGFLTFADRRAMEDAIREMDGAEVGDRVISVNKAQPKM--GSEDPDHGYGGGYISGGRAS 108
Query: 212 XXXXXXXXXXXDCFKCGRPGHWARECP 132
CF CGRPGHWAR+CP
Sbjct: 109 YGGGNRSVGQDTCFSCGRPGHWARDCP 135
>ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202917 [Cucumis sativus]
gi|449487254|ref|XP_004157539.1| PREDICTED:
uncharacterized protein LOC101231083 [Cucumis sativus]
Length = 286
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKM-XXXXXXXXXXXXXXXXXXXXX 216
FGF+TFSD R M+DAIREMHG+E G+R+ISVNKA+PKM
Sbjct: 50 FGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYG 109
Query: 215 XXXXXXXXXXXXDCFKCGRPGHWARECPS 129
+CFKCGR GHWAR+CPS
Sbjct: 110 GGGGGDRSARQDECFKCGRLGHWARDCPS 138
>ref|XP_006288277.1| hypothetical protein CARUB_v10001522mg [Capsella rubella]
gi|482556983|gb|EOA21175.1| hypothetical protein
CARUB_v10001522mg [Capsella rubella]
Length = 272
Score = 84.7 bits (208), Expect = 1e-14
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Frame = -3
Query: 392 FGFVTFSDHRAMEDAIREMHGRELGDRVISVNKAQPKM----XXXXXXXXXXXXXXXXXX 225
FGF+TF+D RAM+++IREMHGR+ GDRVISVN+A+PK+
Sbjct: 12 FGFITFADRRAMDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSFAG 71
Query: 224 XXXXXXXXXXXXXXXDCFKCGRPGHWARECPSA 126
+CFKCGR GHWAR+CPSA
Sbjct: 72 KGSFGGGGGGRVAEDECFKCGRVGHWARDCPSA 104