BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00015018
         (1738 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]    64   4e-16
gb|ABI34306.1| Polyprotein, putative [Solanum demissum]                66   1e-15
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]    64   2e-13
emb|CAN80619.1| hypothetical protein VITISV_005064 [Vitis vinifera]    65   2e-13
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]    61   7e-13
emb|CAN77977.1| hypothetical protein VITISV_010463 [Vitis vinifera]    55   1e-12
ref|XP_004301658.1| PREDICTED: uncharacterized protein LOC101293...    62   4e-12
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                55   7e-12
emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]    57   1e-11
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    64   2e-11
gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subc...    57   6e-11
gb|AAM00978.1|AC090482_7 Putative retrovirus-related pol polypro...    54   6e-11
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    58   1e-10
emb|CAH66607.1| H0211A12.10 [Oryza sativa Indica Group]                54   2e-10
emb|CAD37106.2| OSJNBa0024J22.17 [Oryza sativa Japonica Group]         54   2e-10
gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]      55   2e-10
gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sa...    54   2e-10
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...    55   3e-10
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]    56   4e-10
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...    55   4e-10

>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
          Length = 839

 Score = 63.5 bits (153), Expect(2) = 4e-16
 Identities = 34/62 (54%), Positives = 43/62 (69%)
 Frame = +2

Query: 479 FWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFK 658
           FWKEAI SEIESI+     KLVDLP   K L CK IFK + K +G+I K + +L+A GFK
Sbjct: 493 FWKEAINSEIESIMHNHTWKLVDLPPGNKHLGCKWIFKKKMKPDGTIDKYKARLVAKGFK 552

Query: 659 KE 664
           ++
Sbjct: 553 QK 554



 Score = 49.7 bits (117), Expect(2) = 4e-16
 Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
 Frame = +1

Query: 658 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI--------- 792
           K SLDFF+T SP+T +TS RVLIA+ A+      +M+VK T LNG L+E+I         
Sbjct: 554 KESLDFFDTYSPVTRITSIRVLIAIVALHNLEIHQMDVKTTFLNGELEEKIYMEQPEGFV 613

Query: 793 --------CVPWKSLIKCE*TDSQWNLSF--*LWINGFGEFLEDIPYWVKNQSLQYTHVM 942
                   C   KSL   +    QW+  F   +  N F     D   ++KN   +Y  V 
Sbjct: 614 ALGQEKKVCNLIKSLYGLKQAPKQWHEKFDKVMLSNDFKINESDKCVYIKNTQSEYVIVC 673

Query: 943 L 945
           L
Sbjct: 674 L 674


>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score = 66.2 bits (160), Expect(2) = 1e-15
 Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = +2

Query: 308  SLK*EDVTSFKLRKGHKPSCKYLECGGVAKAFGLDFLILKM-NPRHSKRHCLHKMLIFFW 484
            +LK ++V  F+LR+  +          V K FG DF +  + + R + +  L      FW
Sbjct: 748  TLKNKEVNDFELRRSKRAR--------VEKDFGPDFYVFNVGDDRLTLKEALSSHDSIFW 799

Query: 485  KEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFKK 661
            KEA+  E+ES++     KLVDLP   K + CK + + + K +GSI K + +L+A GFK+
Sbjct: 800  KEAVNDEMESLISNKTWKLVDLPPGCKTIGCKWVLRKKLKPDGSIDKYKARLVAKGFKQ 858



 Score = 45.8 bits (107), Expect(2) = 1e-15
 Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 6/48 (12%)
 Frame = +1

Query: 667  LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
            L+FF+T SP+T +TS R+LIAM AI      +M+VK   LNG L EEI
Sbjct: 862  LEFFDTFSPVTRITSIRLLIAMAAIFDLQIHQMDVKTAFLNGDLNEEI 909


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score = 64.3 bits (155), Expect(2) = 2e-13
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +2

Query: 395 KAFGLDFL--ILKMNPRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCTKP 568
           K+FG DFL  +L+  P+  K   ++      WKEAIKSEI+SILQ    +LVDLP   KP
Sbjct: 582 KSFGPDFLTFMLEGEPQTFKE-AVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKP 640

Query: 569 LRCKSIFK*EFKANGSITKDEVKLIA*GFKK 661
           L  K IFK + K +GSI K + +L+  G+++
Sbjct: 641 LSSKWIFKRKMKVDGSIDKYKARLVIKGYRQ 671



 Score = 39.7 bits (91), Expect(2) = 2e-13
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
 Frame = +1

Query: 667 LDFFNTISPMTIVTSKRVLIAMKAIK------MNVKKTVLNGGLKEEI 792
           LD+F+T SP+T + S R+++A+ A++      M+VK   LNG L EEI
Sbjct: 675 LDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLDEEI 722


>emb|CAN80619.1| hypothetical protein VITISV_005064 [Vitis vinifera]
          Length = 965

 Score = 64.7 bits (156), Expect(2) = 2e-13
 Identities = 41/87 (47%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
 Frame = +2

Query: 425 KMNPRHSKRHCLHKML--------IFFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCK 580
           K  PR SKR      L          FWKEAI SEIESI+     +LVDLP   K + CK
Sbjct: 505 KFEPRRSKRDKKETNLRDAISSPDAPFWKEAINSEIESIMYNHTWELVDLPPGVKTIGCK 564

Query: 581 SIFK*EFKANGSITKDEVKLIA*GFKK 661
            IFK + K NGSI K + +L+A GFK+
Sbjct: 565 WIFKSKLKQNGSIEKYKARLVAKGFKQ 591



 Score = 39.3 bits (90), Expect(2) = 2e-13
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
 Frame = +1

Query: 658 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEICV 798
           +  +D+FNT + +T + S RVLIA+ +I      +M+VK   LNG L+EEI +
Sbjct: 592 RNEVDYFNTFAHVTRLASIRVLIALASIHNLVIHQMDVKIAFLNGDLEEEIYI 644


>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score = 61.2 bits (147), Expect(2) = 7e-13
 Identities = 37/86 (43%), Positives = 52/86 (60%)
 Frame = +2

Query: 404 GLDFLILKMNPRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKS 583
           G    ++  NPR S +  +  +   FWKEAI SEIESI+     +LV+LP   K + CK 
Sbjct: 595 GFYTFLIDDNPR-SYKEVITSLDASFWKEAINSEIESIMCNHTWELVNLPPGAKTIGCKW 653

Query: 584 IFK*EFKANGSITKDEVKLIA*GFKK 661
           IFK + K +GSI K + +L+A GFK+
Sbjct: 654 IFKRKLKQDGSIEKYKARLVAKGFKQ 679



 Score = 41.2 bits (95), Expect(2) = 7e-13
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
 Frame = +1

Query: 667 LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI--------CVPW 804
           +D+F+T +P+T + S RVLIA+ +I      +M+VK   LNG L+EEI         VP 
Sbjct: 683 VDYFDTFAPVTRIASIRVLIALASIHNLVIHQMDVKIAFLNGDLEEEIYMDQPEGCVVPR 742

Query: 805 KSLIKCE*TDSQWNLSF--*LWINGFGEF 885
           K    C+   S + L+     W N F  F
Sbjct: 743 KEKNVCKLVKSPYGLTQAPKQWHNKFDHF 771


>emb|CAN77977.1| hypothetical protein VITISV_010463 [Vitis vinifera]
          Length = 167

 Score = 55.5 bits (132), Expect(2) = 1e-12
 Identities = 26/62 (41%), Positives = 42/62 (67%)
 Frame = +2

Query: 479 FWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFK 658
           +W+EA+  EI SI+Q    +LV+LP   KP+ CK IFK + + NG+I K +  L+A G++
Sbjct: 8   YWQEAVNDEINSIMQNHTWELVNLPPGNKPIGCKWIFKRKLQTNGTIDKYKAHLVAKGYR 67

Query: 659 KE 664
           ++
Sbjct: 68  QK 69



 Score = 46.6 bits (109), Expect(2) = 1e-12
 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
 Frame = +1

Query: 658 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           K  LDFF+T SP+T +TS R+LIA  AI      +M+VK T LNG L EEI
Sbjct: 69  KEGLDFFDTYSPVTRITSIRMLIATTAIHNFEIHQMDVKITFLNGDLDEEI 119


>ref|XP_004301658.1| PREDICTED: uncharacterized protein LOC101293311 [Fragaria vesca
           subsp. vesca]
          Length = 1096

 Score = 62.4 bits (150), Expect(2) = 4e-12
 Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +2

Query: 395 KAFGLDFLILKMNPRHSK-RHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCTKPL 571
           K FG DF++  +    +  +  +      FWKEAI SE+ESILQ    +L +LP  T+P+
Sbjct: 574 KNFGEDFVVFHIEGDPATYKEAMASSDAPFWKEAINSEVESILQNHTWELTNLPPGTRPI 633

Query: 572 RCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            CK +F+ + K +GSI K + +L+A GF ++
Sbjct: 634 GCKWVFRKKLKPDGSIDKYKARLVAKGFTQK 664



 Score = 37.4 bits (85), Expect(2) = 4e-12
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
 Frame = +1

Query: 658 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           K  +D+F+T S ++ +T+ R LIA+ +I      +M+VK   LNG L EEI
Sbjct: 664 KKGIDYFDTYSRVSSITTIRTLIALASIHDLVIHQMDVKTAFLNGDLDEEI 714


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 54.7 bits (130), Expect(2) = 7e-12
 Identities = 28/61 (45%), Positives = 41/61 (67%)
 Frame = +2

Query: 482 WKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFKK 661
           W +AIK+E+ESI +     LVDLP   KP+ CK IFK ++  +GSI K + +L+A GF +
Sbjct: 784 WDKAIKTELESIKKNNTWTLVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQ 843

Query: 662 E 664
           +
Sbjct: 844 K 844



 Score = 44.3 bits (103), Expect(2) = 7e-12
 Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 6/51 (11%)
 Frame = +1

Query: 658 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           K ++D+F+T +P+T ++S RVL+A+ +I      +M+VK T LNG L+EEI
Sbjct: 844 KHNIDYFDTFAPVTRISSIRVLLALASIHKLVIHQMDVKTTFLNGELEEEI 894


>emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]
          Length = 635

 Score = 57.4 bits (137), Expect(2) = 1e-11
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = +2

Query: 479 FWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFK 658
           FWKEAI SEIESI+     +LVDLP   K +  K IFK + K +GSI K + +L+A GFK
Sbjct: 233 FWKEAINSEIESIMYNHTCELVDLPPGAKTIGFKWIFKRKLKQDGSIEKYKARLVAKGFK 292

Query: 659 K 661
           +
Sbjct: 293 Q 293



 Score = 40.8 bits (94), Expect(2) = 1e-11
 Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
 Frame = +1

Query: 664 SLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           ++D+F+T +P+T + S RVL+A+ +I      +M+VK   LNG L+EEI
Sbjct: 296 NIDYFDTFAPVTRIXSIRVLLALASIHNLVIHQMDVKTAFLNGDLEEEI 344


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 64.3 bits (155), Expect(2) = 2e-11
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +2

Query: 395  KAFGLDFL--ILKMNPRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCTKP 568
            K+FG DFL  +L+  P+  K   ++      WKEAIKSEI+SILQ    +LVDLP   KP
Sbjct: 799  KSFGPDFLTFMLEGEPQTFKE-AVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKP 857

Query: 569  LRCKSIFK*EFKANGSITKDEVKLIA*GFKK 661
            L  K IFK + K +GSI K + +L+  G+++
Sbjct: 858  LSSKWIFKRKMKVDGSIDKYKARLVIKGYRQ 888



 Score = 33.5 bits (75), Expect(2) = 2e-11
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
 Frame = +1

Query: 667  LDFFNTISPMTIVTSKRVLIAMKAIK------MNVKKTVLN-------GGLKEEICVPWK 807
            LD+F+T SP+T + S R+++A+ A++      M++K+  +         G ++++C   K
Sbjct: 892  LDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDMKEIYMEQPEGFSAPGQEKKVCKLVK 951

Query: 808  SLIKCE*TDSQWNLSF 855
            SL   +    QW+  F
Sbjct: 952  SLYGLKQAPKQWHEKF 967


>gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1022

 Score = 57.4 bits (137), Expect(2) = 6e-11
 Identities = 47/164 (28%), Positives = 90/164 (54%), Gaps = 3/164 (1%)
 Frame = +2

Query: 182  VKSKSYRSLSESFIVDAILISIRSS*NC-GEAILFASHNFN*ISLK*EDVTSFKLRKGHK 358
            V  +  R+L+E  +V+A+L ++  S    GEAIL A H  N I  K ++       + + 
Sbjct: 623  VAERKNRTLTE--MVNAMLDTVGLSKEWWGEAILIACHVLNRIPTKHKEENP---EEDNI 677

Query: 359  PSCKYLECGGVAKAFGLDFLILKMN--PRHSKRHCLHKMLIFFWKEAIKSEIESILQC*I 532
             + +  +    AK+FG D+++  ++  PR +           +WKEA++SE++SI+    
Sbjct: 678  VATRKSKRQRTAKSFGDDYIVYLVDDTPR-TIEEAYSSPDTDYWKEAVRSEMDSIMSNGT 736

Query: 533  QKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
             ++V+ P   KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 737  WEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 780



 Score = 38.5 bits (88), Expect(2) = 6e-11
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
 Frame = +1

Query: 670 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           DFF+T SP+  +T+ RVL+A+ A       +M+VK   LNG L+EEI
Sbjct: 784 DFFDTYSPVARLTTIRVLLALAASHGLLIHQMDVKTAFLNGELEEEI 830


>gb|AAM00978.1|AC090482_7 Putative retrovirus-related pol polyprotein from transposon Tnt
           1-94 [Oryza sativa Japonica Group]
           gi|31431305|gb|AAP53107.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 536

 Score = 53.5 bits (127), Expect(2) = 6e-11
 Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
 Frame = +2

Query: 389 VAKAFGLDFLILKMN--PRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCT 562
           VAK+FG D+++  ++  PR +           +WKEA++SE++SI+     ++V+ P   
Sbjct: 36  VAKSFGDDYIVYLVDDTPR-TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGC 94

Query: 563 KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
           KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 95  KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 128



 Score = 42.4 bits (98), Expect(2) = 6e-11
 Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 6/49 (12%)
 Frame = +1

Query: 670 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEICV 798
           DFF+T SP+  +T+ RVL+A+ A       +M+VK   LNG L+EEIC+
Sbjct: 132 DFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEICM 180


>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score = 57.8 bits (138), Expect(2) = 1e-10
 Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
 Frame = +2

Query: 359  PSCKYLECGGVAKAFGLDFLILKMNPRHSKR-----HCLH----------KML---IFFW 484
            P+ +  + G + K+FG DF +  +     +      +C H           M+   + FW
Sbjct: 714  PTLRKSKRGRIEKSFGPDFQLYLVEGTRDETGFQYSYCYHIDDEPRTFSEAMMSNDVIFW 773

Query: 485  KEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            KEA+  E++SI+      L DLP   KPL CK IFK + K +G+I K + +L+  GF+++
Sbjct: 774  KEAVNDEMDSIMGNNTWFLTDLPPGCKPLACKWIFKKKIKVDGTIDKFKARLVVQGFRQK 833



 Score = 37.0 bits (84), Expect(2) = 1e-10
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
 Frame = +1

Query: 658 KGSLDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           K  +D+F+T +P+  ++S R+LI + +I      +M+VK   LNG L+EE+
Sbjct: 833 KEGIDYFDTYAPVVRISSIRLLIGLASIHNLVIHQMDVKTAFLNGVLEEEV 883


>emb|CAH66607.1| H0211A12.10 [Oryza sativa Indica Group]
          Length = 1200

 Score = 53.9 bits (128), Expect(2) = 2e-10
 Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = +2

Query: 389  VAKAFGLDFLILKMNPRHSKRHCLHKML-IFFWKEAIKSEIESILQC*IQKLVDLPSCTK 565
            VAK+FG D+++  ++        ++  L   +WKEA+ SE++SI+     ++V+ P   K
Sbjct: 749  VAKSFGDDYIVYLVDDTPRTIEEVYSSLDADYWKEAVHSEMDSIMSNVTWEVVERPYGCK 808

Query: 566  PLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            P+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 809  PVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 841



 Score = 40.4 bits (93), Expect(2) = 2e-10
 Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
 Frame = +1

Query: 670 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           DFF+T SP+ ++T+ RVL+A+ A       +M+VK   LNG L+EEI
Sbjct: 845 DFFDTYSPVALLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 891


>emb|CAD37106.2| OSJNBa0024J22.17 [Oryza sativa Japonica Group]
          Length = 1200

 Score = 53.9 bits (128), Expect(2) = 2e-10
 Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = +2

Query: 389  VAKAFGLDFLILKMNPRHSKRHCLHKML-IFFWKEAIKSEIESILQC*IQKLVDLPSCTK 565
            VAK+FG D+++  ++        ++  L   +WKEA+ SE++SI+     ++V+ P   K
Sbjct: 749  VAKSFGDDYIVYLVDDTPRTIEEVYSSLDADYWKEAVHSEMDSIMSNGTWEVVERPYGCK 808

Query: 566  PLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            P+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 809  PVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 841



 Score = 40.4 bits (93), Expect(2) = 2e-10
 Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
 Frame = +1

Query: 670 DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
           DFF+T SP+ ++T+ RVL+A+ A       +M+VK   LNG L+EEI
Sbjct: 845 DFFDTYSPVALLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 891


>gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1342

 Score = 55.5 bits (132), Expect(2) = 2e-10
 Identities = 31/94 (32%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
 Frame = +2

Query: 389  VAKAFGLDFLILKMN--PRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCT 562
            VAK+FG D+++  ++  PR +           +WKEA++SE++SI+     ++V+ P   
Sbjct: 856  VAKSFGDDYIVYLVDDTPR-TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVECPYGC 914

Query: 563  KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            KP+ CK +FK + + +G+I K +V+L+A G+ ++
Sbjct: 915  KPVGCKWVFKKKLRPDGTIEKYKVRLVAKGYTQK 948



 Score = 38.5 bits (88), Expect(2) = 2e-10
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
 Frame = +1

Query: 670  DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
            DFF+T SP+  +T+ RVL+A+ A       +M+VK   LNG L+EEI
Sbjct: 952  DFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 998


>gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31429942|gb|AAP51926.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1109

 Score = 53.5 bits (127), Expect(2) = 2e-10
 Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
 Frame = +2

Query: 389  VAKAFGLDFLILKMN--PRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCT 562
            VAK+FG D+++  ++  PR +           +WKEA++SE++SI+     ++V+ P   
Sbjct: 861  VAKSFGDDYIVYLVDDTPR-TIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGC 919

Query: 563  KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 920  KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 953



 Score = 40.4 bits (93), Expect(2) = 2e-10
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
 Frame = +1

Query: 670  DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
            DFFNT SP+  +T+ RVL+A+ A       +M+VK   LNG L+EEI
Sbjct: 957  DFFNTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 1003


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1448

 Score = 55.1 bits (131), Expect(2) = 3e-10
 Identities = 30/94 (31%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
 Frame = +2

Query: 389  VAKAFGLDFLILKMN--PRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCT 562
            VAK+FG D+++  ++  PR +       +   +WKEA++SE++SI+     ++V+ P   
Sbjct: 919  VAKSFGDDYIVYLVDDTPR-TIEEAYSSLDADYWKEAVRSEMDSIMSNGTWEVVERPYGC 977

Query: 563  KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 978  KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 1011



 Score = 38.5 bits (88), Expect(2) = 3e-10
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
 Frame = +1

Query: 670  DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
            DFF+T SP+  +T+ RVL+A+ A       +M+VK   LNG L+EEI
Sbjct: 1015 DFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 1061


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score = 55.8 bits (133), Expect(2) = 4e-10
 Identities = 26/63 (41%), Positives = 42/63 (66%)
 Frame = +2

Query: 473  IFFWKEAIKSEIESILQC*IQKLVDLPSCTKPLRCKSIFK*EFKANGSITKDEVKLIA*G 652
            + FWKEAI  E++SI+     +LVDLP  +KP+ CK +F+ ++  +G I   + +L+A G
Sbjct: 813  VAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKG 872

Query: 653  FKK 661
            FK+
Sbjct: 873  FKQ 875



 Score = 37.4 bits (85), Expect(2) = 4e-10
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
 Frame = +1

Query: 667  LDFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
            +D+F+T +P+   TS R+L A+ +I      +M+VK   LNG L EE+
Sbjct: 879  IDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEV 926


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1453

 Score = 54.7 bits (130), Expect(2) = 4e-10
 Identities = 31/94 (32%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
 Frame = +2

Query: 389  VAKAFGLDFLILKMN--PRHSKRHCLHKMLIFFWKEAIKSEIESILQC*IQKLVDLPSCT 562
            VAK+FG D+++  ++  PR +           +WKEA++SEI+SI+     ++V+ P   
Sbjct: 924  VAKSFGDDYIVYLVDDTPR-TIEEAYSSPDADYWKEAVRSEIDSIISNGTWEVVERPYGC 982

Query: 563  KPLRCKSIFK*EFKANGSITKDEVKLIA*GFKKE 664
            KP+ CK +FK + + +G+I K + +L+A G+ ++
Sbjct: 983  KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 1016



 Score = 38.5 bits (88), Expect(2) = 4e-10
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
 Frame = +1

Query: 670  DFFNTISPMTIVTSKRVLIAMKAI------KMNVKKTVLNGGLKEEI 792
            DFF+T SP+  +T+ RVL+A+ A       +M+VK   LNG L+EEI
Sbjct: 1020 DFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEI 1066