BLASTX nr result

ID: Cocculus23_contig00014353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00014353
         (1936 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   669   0.0  
emb|CBI16383.3| unnamed protein product [Vitis vinifera]              660   0.0  
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   660   0.0  
gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]   655   0.0  
ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   645   0.0  
ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thi...   644   0.0  
ref|XP_003539065.2| PREDICTED: mitochondrial tRNA-specific 2-thi...   634   e-179
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   631   e-178
ref|XP_007132017.1| hypothetical protein PHAVU_011G059600g [Phas...   630   e-178
ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prun...   630   e-178
ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thi...   625   e-176
ref|XP_006850208.1| hypothetical protein AMTR_s00022p00251260 [A...   624   e-176
ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   622   e-175
ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Popu...   617   e-174
ref|XP_004301461.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   616   e-173
ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Caps...   615   e-173
ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   614   e-173
ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Caps...   613   e-172
dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]           612   e-172
ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-meth...   611   e-172

>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis sativus]
            gi|449524848|ref|XP_004169433.1| PREDICTED: tRNA-specific
            2-thiouridylase MnmA-like [Cucumis sativus]
          Length = 538

 Score =  669 bits (1726), Expect = 0.0
 Identities = 329/459 (71%), Positives = 367/459 (79%), Gaps = 4/459 (0%)
 Frame = +1

Query: 100  PLKRTLLRHTSNLRTPPKF---FSVASADLHTS-SPSSTFSTGALLDPYLSCSMPGKSLK 267
            PL  ++LR       P  F   FS +SA  +TS S SS   + A   P+LSCSMP   LK
Sbjct: 24   PLTPSILRPLLRRHNPRLFLTRFSASSAVHNTSLSSSSKPLSDADFLPFLSCSMPTYPLK 83

Query: 268  XXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDLKYAEAVCKQ 447
                              H AGHSCTAFYLKIWFQEDFENFWS CPWD+DLKYA+AVC Q
Sbjct: 84   VAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWDDDLKYAKAVCDQ 143

Query: 448  VGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSLEFDYVA 627
            V +PLEVVHLTEEYW+NVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAIS++EFDYVA
Sbjct: 144  VDVPLEVVHLTEEYWRNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISNMEFDYVA 203

Query: 628  SGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLGCICKNEVRR 807
            SGHYA ++H S  Q D  SVLELS+DMVKDQTYF             FPLGCI K+EVR+
Sbjct: 204  SGHYANVIHPSADQMDKPSVLELSKDMVKDQTYFLSHLSQNQLKRLLFPLGCIPKDEVRK 263

Query: 808  IAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLGKHRGFWFYT 987
            +AA+ NLPN+DRKDSQGICFLGKIKFSEFVARHIGE EGV+LEAE+GDFLGKHRGFWFYT
Sbjct: 264  LAAKFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEDEGVILEAESGDFLGKHRGFWFYT 323

Query: 988  IGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQ 1167
            IGQRQGLRLPGGPWYVV KD++NNVVFVSRNYFSFDK+RR F VGSL WLSG PPD F +
Sbjct: 324  IGQRQGLRLPGGPWYVVEKDIKNNVVFVSRNYFSFDKRRRVFRVGSLKWLSGFPPDQFTE 383

Query: 1168 LQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRGKTCLGSGII 1347
            LQCKVRHGP FYSC+LT+E  EDG    AVVH+SEDDQGLAAGQFAAFY+G++C+GSG+I
Sbjct: 384  LQCKVRHGPSFYSCNLTMEHSEDGHEDVAVVHLSEDDQGLAAGQFAAFYKGRSCIGSGVI 443

Query: 1348 LESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPES 1464
            LESW D+GFPVC +A+E A MEDKSKLG+PIKIKVKPES
Sbjct: 444  LESWDDQGFPVCQKAIENAQMEDKSKLGKPIKIKVKPES 482


>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  660 bits (1702), Expect = 0.0
 Identities = 331/489 (67%), Positives = 372/489 (76%), Gaps = 7/489 (1%)
 Frame = +1

Query: 55   QNPRSNLRCFSIFFAPLKRTLLRHTSNLRTPPKFFSVASADLH-------TSSPSSTFST 213
            +NP  NLR     F+P K   L    NLR      +VA+           T+ PS+ F+ 
Sbjct: 17   RNP--NLRFCISLFSP-KPFSLCFLPNLRPSITTAAVAATSAAASGTTTITTPPSNLFN- 72

Query: 214  GALLDPYLSCSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFW 393
             A L PYLSCS+P   LK                  H AGHSCTAFYLKIWFQEDFENFW
Sbjct: 73   -ADLQPYLSCSLPNNRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFW 131

Query: 394  SACPWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRI 573
            S CPW++DLKYA+AVC QV +PLEVVHLT+EYWKNVVSYIIEEYRCGRTPNPDVLCNTRI
Sbjct: 132  SECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRI 191

Query: 574  KFGAFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXX 753
            KFGAFMDAISS EFDYVASGHYA ++HS   Q D  SVLELS+DMVKDQTYF        
Sbjct: 192  KFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQ 251

Query: 754  XXXXXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLL 933
                 FPLGCI K+EVR +A +L+LPNRDRKDSQGICFLGKIKFSEFVARHIGE EG++L
Sbjct: 252  LKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIIL 311

Query: 934  EAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGF 1113
            EAETGD LGKHRGFWFYTIGQRQGLRLPGGPWYVV KDV+NNVVFVSRNYFS DK+RR F
Sbjct: 312  EAETGDLLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRRRLF 371

Query: 1114 HVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAA 1293
             VGSL W+S  PP   +QLQCKVRHGPGFY+CS T+EP EDG    AVV +SEDDQGLAA
Sbjct: 372  RVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQGLAA 431

Query: 1294 GQFAAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPESHP* 1473
            GQF AFY+G++C+GSG+ILESW D+GFPVCA+ALEIA MEDKSKLG+P+KIKV+PE+ P 
Sbjct: 432  GQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPETPPK 491

Query: 1474 NLKHDDAIE 1500
                 D I+
Sbjct: 492  GSDQIDGIK 500


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  660 bits (1702), Expect = 0.0
 Identities = 331/489 (67%), Positives = 372/489 (76%), Gaps = 7/489 (1%)
 Frame = +1

Query: 55   QNPRSNLRCFSIFFAPLKRTLLRHTSNLRTPPKFFSVASADLH-------TSSPSSTFST 213
            +NP  NLR     F+P K   L    NLR      +VA+           T+ PS+ F+ 
Sbjct: 13   RNP--NLRFCISLFSP-KPFSLCFLPNLRPSITTAAVAATSAAASGTTTITTPPSNLFN- 68

Query: 214  GALLDPYLSCSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFW 393
             A L PYLSCS+P   LK                  H AGHSCTAFYLKIWFQEDFENFW
Sbjct: 69   -ADLQPYLSCSLPNNRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFW 127

Query: 394  SACPWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRI 573
            S CPW++DLKYA+AVC QV +PLEVVHLT+EYWKNVVSYIIEEYRCGRTPNPDVLCNTRI
Sbjct: 128  SECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRI 187

Query: 574  KFGAFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXX 753
            KFGAFMDAISS EFDYVASGHYA ++HS   Q D  SVLELS+DMVKDQTYF        
Sbjct: 188  KFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQ 247

Query: 754  XXXXXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLL 933
                 FPLGCI K+EVR +A +L+LPNRDRKDSQGICFLGKIKFSEFVARHIGE EG++L
Sbjct: 248  LKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIIL 307

Query: 934  EAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGF 1113
            EAETGD LGKHRGFWFYTIGQRQGLRLPGGPWYVV KDV+NNVVFVSRNYFS DK+RR F
Sbjct: 308  EAETGDLLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRRRLF 367

Query: 1114 HVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAA 1293
             VGSL W+S  PP   +QLQCKVRHGPGFY+CS T+EP EDG    AVV +SEDDQGLAA
Sbjct: 368  RVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQGLAA 427

Query: 1294 GQFAAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPESHP* 1473
            GQF AFY+G++C+GSG+ILESW D+GFPVCA+ALEIA MEDKSKLG+P+KIKV+PE+ P 
Sbjct: 428  GQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPETPPK 487

Query: 1474 NLKHDDAIE 1500
                 D I+
Sbjct: 488  GSDQIDGIK 496


>gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
          Length = 580

 Score =  655 bits (1691), Expect = 0.0
 Identities = 327/474 (68%), Positives = 369/474 (77%), Gaps = 6/474 (1%)
 Frame = +1

Query: 61   PRSNLRCFSIFFA-PLK-RTLLRHTSNLRTPP----KFFSVASADLHTSSPSSTFSTGAL 222
            P S+L   S F + PLK RT L    +L T      + FSV++A   +SS  S    G +
Sbjct: 58   PSSSLIIQSRFISLPLKPRTRLPPKPHLPTSKSLVFRLFSVSAASAVSSSHHSKSFDGDI 117

Query: 223  LDPYLSCSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSAC 402
             +PYLSCSMP K L+                  H AGHSCTAFYLKIWFQEDFENFWS C
Sbjct: 118  -EPYLSCSMPHKRLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSEC 176

Query: 403  PWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFG 582
            PW+EDLKYA+AVC Q+ +PLEVVHLT+EYWKNVVSYII+EYRCGRTPNPDVLCNTRIKFG
Sbjct: 177  PWEEDLKYAKAVCSQIEVPLEVVHLTDEYWKNVVSYIIDEYRCGRTPNPDVLCNTRIKFG 236

Query: 583  AFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXX 762
            +FMDAISS+EFDYVASGHYA ++HS   +R   SVLELS+DMVKDQTYF           
Sbjct: 237  SFMDAISSMEFDYVASGHYANVVHSFTNERGDASVLELSQDMVKDQTYFLSHLSQAQLKR 296

Query: 763  XXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAE 942
              FPLGCI K EVR++A + +LPN+DRKDSQGICFLGKIKFSEFVARHIGE EG++LEAE
Sbjct: 297  LVFPLGCISKEEVRKLAKKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAE 356

Query: 943  TGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVG 1122
            TGDFLG HRGFWFYTIGQRQGLRLPGGPWYVV KDV+NNVVF SRNYFSFDK+RR F VG
Sbjct: 357  TGDFLGMHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFASRNYFSFDKRRRIFRVG 416

Query: 1123 SLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQF 1302
            SL WL+G PPD   QLQCKVRHGPGFY+CS T+E  E+     AVV +SEDDQGLA GQF
Sbjct: 417  SLKWLNGLPPDQTCQLQCKVRHGPGFYNCSFTMESGENSGEDVAVVQLSEDDQGLAVGQF 476

Query: 1303 AAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPES 1464
            AAFY+GK+CLGSGIILESW D+GFPVC +ALEIA MEDKS LG+P+KIKVKPES
Sbjct: 477  AAFYQGKSCLGSGIILESWDDQGFPVCEKALEIAKMEDKSLLGKPVKIKVKPES 530


>ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cicer arietinum]
          Length = 484

 Score =  645 bits (1664), Expect = 0.0
 Identities = 309/445 (69%), Positives = 346/445 (77%), Gaps = 15/445 (3%)
 Frame = +1

Query: 175  DLHTSSPSSTFSTGAL---------------LDPYLSCSMPGKSLKXXXXXXXXXXXXXX 309
            +LHT +P+  F T  L               LDPYL CSMP   L+              
Sbjct: 25   NLHTLNPNLLFPTSKLFCSASLQTSPSINGQLDPYLRCSMPHNPLRVAVLISGGVDSSVA 84

Query: 310  XXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDLKYAEAVCKQVGIPLEVVHLTEEY 489
                H AGHSCTAFYLKIWFQEDFENFWS CPW++DLKYA+ VC QV +PLEVVHLT+EY
Sbjct: 85   LRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKDVCNQVEVPLEVVHLTDEY 144

Query: 490  WKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSLEFDYVASGHYARLLHSSLGQ 669
            WKNVVSYIIEEY+CGRTPNPDVLCNTRIKFGAF+DAIS + FDYVASGHYA ++H S  Q
Sbjct: 145  WKNVVSYIIEEYQCGRTPNPDVLCNTRIKFGAFLDAISDMGFDYVASGHYANVIHPSADQ 204

Query: 670  RDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLGCICKNEVRRIAAELNLPNRDRKD 849
             DG S LELS+DMVKDQTYF             FPLGCI K+EVRR+A + +LPN+DRKD
Sbjct: 205  MDGPSTLELSQDMVKDQTYFLSHLSQSQLKQLLFPLGCIPKDEVRRLATKFDLPNKDRKD 264

Query: 850  SQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPW 1029
            SQGICFLGKIKFSEFVARHIGE EG++LEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPW
Sbjct: 265  SQGICFLGKIKFSEFVARHIGEKEGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPW 324

Query: 1030 YVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSC 1209
            YVV KDV+NNVVFVSRNYFS DK+RR F VGSL WLSG PP    QL+CKVRHGPGFY C
Sbjct: 325  YVVEKDVKNNVVFVSRNYFSIDKRRRVFRVGSLKWLSGLPPSQTSQLRCKVRHGPGFYDC 384

Query: 1210 SLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRGKTCLGSGIILESWGDEGFPVCAR 1389
            SL +E + +    SAVV ISEDDQGLAAGQF AFY G+TC+GSG+ILESW D+GFPVC +
Sbjct: 385  SLQMELEGENPIDSAVVRISEDDQGLAAGQFTAFYEGRTCIGSGVILESWDDQGFPVCTK 444

Query: 1390 ALEIAGMEDKSKLGQPIKIKVKPES 1464
            ALEIA MEDKSK+G P+KIKVKP++
Sbjct: 445  ALEIARMEDKSKIGNPVKIKVKPDN 469


>ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like [Citrus
            sinensis]
          Length = 525

 Score =  644 bits (1660), Expect = 0.0
 Identities = 314/426 (73%), Positives = 348/426 (81%), Gaps = 3/426 (0%)
 Frame = +1

Query: 196  SSTFSTGAL-LDP-YLSCSMPG-KSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIW 366
            S + ST A  ++P YLSCSMP  K LK                  H AGHSCTAFYLKIW
Sbjct: 45   SCSVSTAATQIEPRYLSCSMPHQKGLKVAVLLSGGVDSSVALRLLHSAGHSCTAFYLKIW 104

Query: 367  FQEDFENFWSACPWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPN 546
            FQEDFENFW+ CPW+ED+KYA+AVC QV +PLEVVHLT+EYWKNVVSYIIEEYRCGRTPN
Sbjct: 105  FQEDFENFWTECPWEEDMKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPN 164

Query: 547  PDVLCNTRIKFGAFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTY 726
            PDVLCNTRIKFGAFMDAISS+EFDYVASGHYA+++HSS  Q    SVLELS+D VKDQTY
Sbjct: 165  PDVLCNTRIKFGAFMDAISSMEFDYVASGHYAKVVHSSADQEYKPSVLELSKDKVKDQTY 224

Query: 727  FXXXXXXXXXXXXXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARH 906
            F             FPLGCI K EVR+ A + +LPN+DRKDSQGICFLGKIKFSEFVARH
Sbjct: 225  FLSHLSQAQLKRLIFPLGCISKEEVRKFATQFDLPNKDRKDSQGICFLGKIKFSEFVARH 284

Query: 907  IGEMEGVLLEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYF 1086
            IGEMEGV+LEAETGDFLGKH GFWFYTIGQRQGLRLPGGPWYVV KDV+NNVVFVSRNY+
Sbjct: 285  IGEMEGVILEAETGDFLGKHWGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYY 344

Query: 1087 SFDKKRRGFHVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHI 1266
            SFDKKRR F VGSL WLSG PP+   +LQCKVRHGPGFY+C+L +E  EDG    AVV +
Sbjct: 345  SFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQL 404

Query: 1267 SEDDQGLAAGQFAAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKI 1446
            SEDDQGLAAGQFAAFY+G  C+GSG+ILESW D+GFPVC +ALEIA MEDKSKLG+PIKI
Sbjct: 405  SEDDQGLAAGQFAAFYQGTRCIGSGVILESWDDQGFPVCEKALEIARMEDKSKLGKPIKI 464

Query: 1447 KVKPES 1464
            KVKPE+
Sbjct: 465  KVKPET 470


>ref|XP_003539065.2| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like isoform
            X1 [Glycine max]
          Length = 502

 Score =  634 bits (1634), Expect = e-179
 Identities = 313/470 (66%), Positives = 349/470 (74%), Gaps = 1/470 (0%)
 Frame = +1

Query: 58   NPRSNLRCFSIFFAPLKRTLLRHTSNLRTPPKFFSVASADLHTSSPSSTFSTGALLDPYL 237
            NPR   R F +F  P                     +SA  HTS P S       LD YL
Sbjct: 32   NPRPRCRTFKLFCRPS--------------------SSAVAHTSPPLS-----GDLDRYL 66

Query: 238  SCSMPGKS-LKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDE 414
             CSMP  S L+                  H AGHSCTAFYLKIWFQEDFENFWS CPW++
Sbjct: 67   RCSMPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWED 126

Query: 415  DLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMD 594
            DLKYA+ VC QV +PLEVVHLT+EYW NVVSY+IEEY  GRTPNPDVLCNTRIKFGAF+D
Sbjct: 127  DLKYAKDVCNQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTRIKFGAFLD 186

Query: 595  AISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFP 774
            AI  + FDYVASGHYA ++H    +RD  SVLELS+DMVKDQTYF             FP
Sbjct: 187  AIGGMGFDYVASGHYANVIHPCSDRRDEPSVLELSQDMVKDQTYFLSHLSQSQLKQLLFP 246

Query: 775  LGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDF 954
            LGCI K+EVR++A + +LPN+DRKDSQGICFLGKI+FSEFVARHIGE EGV+LEAETGDF
Sbjct: 247  LGCIPKDEVRKLATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGVILEAETGDF 306

Query: 955  LGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNW 1134
            LGKHRGFWFYTIGQRQGLRLPGGPWYVV KDV+NNVVFVSRNYFSFDK+RR F VGS  W
Sbjct: 307  LGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRVFRVGSFKW 366

Query: 1135 LSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFY 1314
            LSG PP    QLQCKVRHGPGFY CSL +E + DGQ  SAVV ISEDDQGLAAGQFAAFY
Sbjct: 367  LSGLPPGQTTQLQCKVRHGPGFYDCSLQMEVEADGQCHSAVVRISEDDQGLAAGQFAAFY 426

Query: 1315 RGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPES 1464
             G+TC+GSG+ILE W D+ FPVC +ALEIA MEDKSK+G P+KIKVKP++
Sbjct: 427  EGRTCIGSGVILEFWDDQSFPVCTKALEIARMEDKSKIGNPVKIKVKPDN 476


>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
            putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
            tRNA
            (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
            putative [Ricinus communis]
          Length = 497

 Score =  631 bits (1627), Expect = e-178
 Identities = 303/442 (68%), Positives = 347/442 (78%), Gaps = 1/442 (0%)
 Frame = +1

Query: 178  LHTSSPSSTFSTGALLDPYLSCSMPGKS-LKXXXXXXXXXXXXXXXXXXHYAGHSCTAFY 354
            L T + ++    G +   YLSC +P K+ L+                  H AGH CTAFY
Sbjct: 42   LTTRASNNNAGCGIIEPNYLSCCLPDKNNLRIALLLSGGVDSSVALRLLHAAGHHCTAFY 101

Query: 355  LKIWFQEDFENFWSACPWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCG 534
            LKIWFQEDFENFWS CPW+EDLKYA+AVC QV IPLEVVHLT+EYWKNVVSYIIEEYRCG
Sbjct: 102  LKIWFQEDFENFWSECPWEEDLKYAKAVCDQVDIPLEVVHLTDEYWKNVVSYIIEEYRCG 161

Query: 535  RTPNPDVLCNTRIKFGAFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVK 714
            RTPNPDVLCNTRIKFGAFMDAI+++EFDYVASGHYA+++H S  + +  SVLELS+DMVK
Sbjct: 162  RTPNPDVLCNTRIKFGAFMDAINNMEFDYVASGHYAKVIHPSADEINQPSVLELSKDMVK 221

Query: 715  DQTYFXXXXXXXXXXXXXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEF 894
            DQTYF             FPLG I K+EVR++A   NLPN+DRKDSQGICFLGKIKFSEF
Sbjct: 222  DQTYFLSHLSQAQLRRLIFPLGGISKDEVRKLATLFNLPNKDRKDSQGICFLGKIKFSEF 281

Query: 895  VARHIGEMEGVLLEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVS 1074
            VARHIGEMEG++LEAETGDFLG HRGFWFYTIGQRQGLRLPGGPWYVV KDV+NNVVFVS
Sbjct: 282  VARHIGEMEGIMLEAETGDFLGNHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVS 341

Query: 1075 RNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASA 1254
            RNYFSFDK+RR   VGSL W +GSPP    +LQCKVRHGPGFY+CS+ +EP E      A
Sbjct: 342  RNYFSFDKRRRLLRVGSLRWFNGSPPKETSELQCKVRHGPGFYNCSVVIEPGEVDDQDVA 401

Query: 1255 VVHISEDDQGLAAGQFAAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQ 1434
            +V + EDDQGLAAGQFAAFY+G+TC+GSG+ILESW D+GFPVC RALE+A +EDKS+LG+
Sbjct: 402  IVQLCEDDQGLAAGQFAAFYKGRTCIGSGVILESWNDQGFPVCERALELARIEDKSELGK 461

Query: 1435 PIKIKVKPESHP*NLKHDDAIE 1500
            P+KIKVKPE         D IE
Sbjct: 462  PVKIKVKPEIPVREFDGKDGIE 483


>ref|XP_007132017.1| hypothetical protein PHAVU_011G059600g [Phaseolus vulgaris]
            gi|561005017|gb|ESW04011.1| hypothetical protein
            PHAVU_011G059600g [Phaseolus vulgaris]
          Length = 488

 Score =  630 bits (1625), Expect = e-178
 Identities = 312/453 (68%), Positives = 347/453 (76%), Gaps = 6/453 (1%)
 Frame = +1

Query: 124  HTSNLRTPPKFFSV-----ASADLHTSSPSSTFSTGALLDPYLSCSMPGKS-LKXXXXXX 285
            HT N R P +   +     +SA  HTS P S     A L  YL CS+P  S L+      
Sbjct: 27   HTLNPRPPCRTVRLFCRPSSSAVAHTSLPLS-----ADLHRYLRCSLPQNSPLRVAVLVS 81

Query: 286  XXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDLKYAEAVCKQVGIPLE 465
                        H AGHSCTAFYLKIWFQEDFENFWS CPW+EDLKYA+AVC+QV +PLE
Sbjct: 82   GGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEEDLKYAKAVCEQVDVPLE 141

Query: 466  VVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSLEFDYVASGHYAR 645
            VVHLT+EYW NVVSY+IEEY  GRTPNPDVLCNTRIKFGAF+DAI  + FDYVASGHYA 
Sbjct: 142  VVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTRIKFGAFLDAIGGMGFDYVASGHYAN 201

Query: 646  LLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLGCICKNEVRRIAAELN 825
            ++H      +G SVLELS+DMVKDQTYF             FPLGCI K+EVRR+A E +
Sbjct: 202  VIHPCADGMNGPSVLELSQDMVKDQTYFLSHLSQSQLKQLLFPLGCIPKDEVRRLATEFD 261

Query: 826  LPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLGKHRGFWFYTIGQRQG 1005
            LPN+DRKDSQGICFLGKI+FSEFVARHIGE EG++LEAETGDFLGKHRGFWFYTIGQRQG
Sbjct: 262  LPNKDRKDSQGICFLGKIRFSEFVARHIGEREGIILEAETGDFLGKHRGFWFYTIGQRQG 321

Query: 1006 LRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQLQCKVR 1185
            LRLPGGPWYVV KDV+NNVVFVSRNYFSFDK+RR F VGS  WLS  PP    QLQCKVR
Sbjct: 322  LRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKRRRVFRVGSFKWLSELPPGQTSQLQCKVR 381

Query: 1186 HGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRGKTCLGSGIILESWGD 1365
            HGPGFY CSL +E + DGQ  SAVV ISEDDQGLAAGQFAAFY G+TCLGSG+ILE W +
Sbjct: 382  HGPGFYDCSLQMEVEGDGQGHSAVVRISEDDQGLAAGQFAAFYEGRTCLGSGVILEFWDE 441

Query: 1366 EGFPVCARALEIAGMEDKSKLGQPIKIKVKPES 1464
            + FPVC +ALEIA MEDKS LG P+KIKVKP+S
Sbjct: 442  QSFPVCTKALEIARMEDKSILGNPVKIKVKPDS 474


>ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prunus persica]
            gi|462405627|gb|EMJ11091.1| hypothetical protein
            PRUPE_ppa004048mg [Prunus persica]
          Length = 533

 Score =  630 bits (1625), Expect = e-178
 Identities = 303/433 (69%), Positives = 342/433 (78%)
 Frame = +1

Query: 166  ASADLHTSSPSSTFSTGALLDPYLSCSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCT 345
            +S+     +P    S    L PYLSCSMP +SLK                  H AGHSCT
Sbjct: 49   SSSSAVPQTPHPPNSINGDLGPYLSCSMPHQSLKVAVLLSGGVDSSVALRLLHAAGHSCT 108

Query: 346  AFYLKIWFQEDFENFWSACPWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEY 525
            AFYLKIWFQEDFENFWS CPW+EDLKYA+AVC QV +PLEVVHLT EYWKNVVSYIIEEY
Sbjct: 109  AFYLKIWFQEDFENFWSECPWEEDLKYAKAVCNQVDVPLEVVHLTNEYWKNVVSYIIEEY 168

Query: 526  RCGRTPNPDVLCNTRIKFGAFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSED 705
            RCGRTPNPDVLCNTRIKFGAFMDAIS ++FDYVASGHYA ++H S G+ D  SVLELS+D
Sbjct: 169  RCGRTPNPDVLCNTRIKFGAFMDAISCMKFDYVASGHYANVVHPSAGEMDEDSVLELSQD 228

Query: 706  MVKDQTYFXXXXXXXXXXXXXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKF 885
            M    TYF             FPLGC+ K+EVR++A + +L N+ RKDSQGICFLGK+KF
Sbjct: 229  M----TYFLSHLSQAQLKQLIFPLGCLSKDEVRKLATKFDLLNKQRKDSQGICFLGKLKF 284

Query: 886  SEFVARHIGEMEGVLLEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVV 1065
            SEF+ARHIGE EG++LEAETGDFLG HRGFWFYTIGQRQGLRLPGGPWYVV KD++NNVV
Sbjct: 285  SEFIARHIGEKEGIILEAETGDFLGTHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVV 344

Query: 1066 FVSRNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQA 1245
            FVSRNYFS DK+RR F VGSL WL+G P +   QLQCKVRHGPGF +CSL +EP   G  
Sbjct: 345  FVSRNYFSVDKRRRLFRVGSLKWLNGFPQNQISQLQCKVRHGPGFRNCSLIMEPGAYGHE 404

Query: 1246 ASAVVHISEDDQGLAAGQFAAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSK 1425
              AVVH+SEDDQGLAAGQFAAFY+G+TCLGSG+ILESW D+GFPVCARALEIA MEDKS 
Sbjct: 405  DVAVVHLSEDDQGLAAGQFAAFYQGRTCLGSGVILESWDDQGFPVCARALEIARMEDKSL 464

Query: 1426 LGQPIKIKVKPES 1464
            LG+P+KIKVKPE+
Sbjct: 465  LGKPVKIKVKPEN 477


>ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
            [Solanum tuberosum]
          Length = 488

 Score =  625 bits (1611), Expect = e-176
 Identities = 299/429 (69%), Positives = 340/429 (79%), Gaps = 1/429 (0%)
 Frame = +1

Query: 178  LHTSSPSSTFSTGALLDPYLSCSMPGKS-LKXXXXXXXXXXXXXXXXXXHYAGHSCTAFY 354
            L  SSP   +    +   YLSCSMP K+ LK                  H AGHSCTAFY
Sbjct: 55   LAVSSPIRNYGDEKINPTYLSCSMPHKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFY 114

Query: 355  LKIWFQEDFENFWSACPWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCG 534
            LKIWFQEDFEN+WS CPW++DLKYA+AVC QV +PLEVVHLT+EYW NVVSYIIEEY+CG
Sbjct: 115  LKIWFQEDFENYWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCG 174

Query: 535  RTPNPDVLCNTRIKFGAFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVK 714
            RTPNPDVLCNTRIKFGAFMDAIS +EFD+VASGHYA+++H+S  Q D  S+L+LS+DMVK
Sbjct: 175  RTPNPDVLCNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTAQLDEPSILKLSKDMVK 234

Query: 715  DQTYFXXXXXXXXXXXXXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEF 894
            DQTYF             FPLGCI K+EVR +A   NLPN+DRKDSQGICFLGKIKFSEF
Sbjct: 235  DQTYFLSHLSQAQLKRLIFPLGCIQKDEVRTLAKSFNLPNQDRKDSQGICFLGKIKFSEF 294

Query: 895  VARHIGEMEGVLLEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVS 1074
            VARHIGE EG++LEAE GD+LG HRGFWFYTIGQRQGLRLPGGPWYVV KD++NNVV+VS
Sbjct: 295  VARHIGESEGIILEAENGDYLGNHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVYVS 354

Query: 1075 RNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASA 1254
            RNYFS DKKRR F VGSL WLSG  P   ++LQCKVRHGP FY CSL +E D+ GQ   A
Sbjct: 355  RNYFSVDKKRRLFRVGSLKWLSGLFPKQINELQCKVRHGPSFYDCSLVMEVDQHGQEV-A 413

Query: 1255 VVHISEDDQGLAAGQFAAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQ 1434
            VV +S DDQGLAAGQFAAFY G+TC+GSGIILESW D+G+P+C +ALEIA MEDKSKLG+
Sbjct: 414  VVRLSGDDQGLAAGQFAAFYNGRTCIGSGIILESWDDQGYPICEKALEIARMEDKSKLGK 473

Query: 1435 PIKIKVKPE 1461
            P+KI VKPE
Sbjct: 474  PVKIMVKPE 482


>ref|XP_006850208.1| hypothetical protein AMTR_s00022p00251260 [Amborella trichopoda]
            gi|548853806|gb|ERN11789.1| hypothetical protein
            AMTR_s00022p00251260 [Amborella trichopoda]
          Length = 565

 Score =  624 bits (1609), Expect = e-176
 Identities = 295/413 (71%), Positives = 330/413 (79%)
 Frame = +1

Query: 232  YLSCSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWD 411
            YL CS+P K  K                   YAGHSCTAFYLKIWFQEDFENFWSACPWD
Sbjct: 114  YLECSLPEKRSKVAVLVSGGVDSSVALRLLCYAGHSCTAFYLKIWFQEDFENFWSACPWD 173

Query: 412  EDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFM 591
            EDLKYA+AVC +V +PLEVVHLT+EYW NVVS+II EYR GRTPNPDVLCNTRIKFGAF+
Sbjct: 174  EDLKYAKAVCDEVHVPLEVVHLTDEYWNNVVSHIISEYRSGRTPNPDVLCNTRIKFGAFL 233

Query: 592  DAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXF 771
            DAI +++FDYVASGHYAR++H    Q D  S LELS D VKDQTYF             F
Sbjct: 234  DAIGNMDFDYVASGHYARVVHPPPDQPDASSALELSADKVKDQTYFLSHLSQTQLNRLLF 293

Query: 772  PLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGD 951
            PLGC+ K+EVRR+AA++ LPN+DRKDSQGICFLGK+KFS+FV RHIGEMEGVLLEAETGD
Sbjct: 294  PLGCLSKDEVRRLAAKMGLPNKDRKDSQGICFLGKLKFSDFVTRHIGEMEGVLLEAETGD 353

Query: 952  FLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLN 1131
            FLGKH+G+WFYTIGQRQGLRLPGGPWYVV KD+ NNV+FVSRNYFSFDKKRR F VGSL 
Sbjct: 354  FLGKHQGYWFYTIGQRQGLRLPGGPWYVVNKDIENNVIFVSRNYFSFDKKRRSFRVGSLK 413

Query: 1132 WLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAF 1311
            WLSG+PP+H DQLQCKVRHGP FY C+  +E   D    SA++HISEDDQGLAAGQFAAF
Sbjct: 414  WLSGAPPEHLDQLQCKVRHGPCFYDCTFKIESRCDEHEDSALIHISEDDQGLAAGQFAAF 473

Query: 1312 YRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPESHP 1470
            YR   C+GSGIILESW D+ F VC++ALE A MEDKSKLG PIKIKVK E +P
Sbjct: 474  YRKNVCIGSGIILESWDDQNFSVCSKALERAKMEDKSKLGLPIKIKVKSEPNP 526


>ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Solanum
            lycopersicum]
          Length = 489

 Score =  622 bits (1604), Expect = e-175
 Identities = 307/465 (66%), Positives = 357/465 (76%), Gaps = 5/465 (1%)
 Frame = +1

Query: 82   FSIFFAPLKRTLLRHTSNLR----TPPKFFSVASADLHTSSPSSTFSTGALLDPYLSCSM 249
            FS++  P ++ L++  S  R    T  + FS+    L  SSP   +    +   YLSCSM
Sbjct: 19   FSLY--PFQKPLIQVFSQPRKITTTARRLFSLKP--LAVSSPIRNYGDERIDPTYLSCSM 74

Query: 250  PGKS-LKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDLKY 426
            P K+ LK                  H AGHSCTAFYLKIWFQEDFEN+WS CPW++DLKY
Sbjct: 75   PHKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENYWSECPWEDDLKY 134

Query: 427  AEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISS 606
            A+ VC QV +PLEVVHLT+EYW NVVSYIIEEY+CGRTPNPDVLCNTRIKFGAFMDAIS 
Sbjct: 135  AKGVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAFMDAISG 194

Query: 607  LEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLGCI 786
            +EFD+VASGHYA+++H+S  Q D  SVLELS+DMVKDQTYF             FPLGCI
Sbjct: 195  MEFDFVASGHYAKIVHASTEQLDEPSVLELSKDMVKDQTYFLSHLSQAQLKRLIFPLGCI 254

Query: 787  CKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLGKH 966
             K+EVR +A   NLPN++RKDSQGICFLGKIKFSEFVARHIGE EG++LEAE GD+LG H
Sbjct: 255  QKDEVRMLAKSFNLPNQERKDSQGICFLGKIKFSEFVARHIGESEGIILEAENGDYLGNH 314

Query: 967  RGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLSGS 1146
            RGFWFYTIGQRQGLRLPGGPWYVV KD++NNVV+VSRNYFS DKKRR F VGSL WLSG 
Sbjct: 315  RGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVYVSRNYFSVDKKRRLFRVGSLKWLSGL 374

Query: 1147 PPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRGKT 1326
             P   D+LQCKVRHGPGFY+CSL +E D+ GQ   AVV +S DDQGLAAGQFAAFY G+T
Sbjct: 375  FPKQIDELQCKVRHGPGFYNCSLVMEVDQHGQEV-AVVRLSGDDQGLAAGQFAAFYDGRT 433

Query: 1327 CLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPE 1461
            C+GSGIILESW D+G+P+C RALEIA MEDKSKLG+P+KI ++ +
Sbjct: 434  CIGSGIILESWDDQGYPICERALEIARMEDKSKLGKPVKIMLEEQ 478


>ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Populus trichocarpa]
            gi|550348245|gb|EEE83209.2| hypothetical protein
            POPTR_0001s26620g [Populus trichocarpa]
          Length = 512

 Score =  617 bits (1591), Expect = e-174
 Identities = 310/486 (63%), Positives = 355/486 (73%), Gaps = 6/486 (1%)
 Frame = +1

Query: 61   PRSNLRCFSIFFAPLKRTLLRHTSNLRTPPKFFSVASADLHTSSPSSTFSTGA---LLDP 231
            P  +L  FS   AP + +L+ H+ N    PK             P++ F +G     +DP
Sbjct: 32   PFFSLSSFST--APFQSSLVSHSFN----PK-------------PTTLFDSGKNAISVDP 72

Query: 232  Y-LSCSMPGKS--LKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSAC 402
            Y LSC M  K   L+                  H AGH CTAFYLKIWFQEDF NFWS C
Sbjct: 73   YYLSCCMADKDKPLRIAVLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFNNFWSEC 132

Query: 403  PWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFG 582
            PW+EDLK+A+ VC QVG+PLEVVHLT+EYW NVVSYIIEEYRCGRTPNPDVLCNTRIKFG
Sbjct: 133  PWEEDLKFAKGVCDQVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCNTRIKFG 192

Query: 583  AFMDAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXX 762
            AFMDAI+++EFDYVASGHYA ++H    Q +  SVLELS+D +KDQTYF           
Sbjct: 193  AFMDAINNMEFDYVASGHYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLTQAQLKR 252

Query: 763  XXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAE 942
              FPLGCI K EVR +A++ +LPN+DRKDSQGICFLGKIKFSEFV RHIGE EGV+LEAE
Sbjct: 253  LIFPLGCIPKEEVRNLASKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEGVILEAE 312

Query: 943  TGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVG 1122
            TGDFLG HRGFWFYTIGQRQGLRLPGGPWYVV KDV+NNVVFVSRNYFS DK+RR F VG
Sbjct: 313  TGDFLGIHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRRRSFRVG 372

Query: 1123 SLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQF 1302
            SL WLSGSP D   QLQCKVRHGP FY CS+ +E  ED       VH+ EDDQGLAAGQF
Sbjct: 373  SLKWLSGSPTDMTTQLQCKVRHGPTFYDCSVKIELGEDSPEEVVAVHLCEDDQGLAAGQF 432

Query: 1303 AAFYRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKPESHP*NLK 1482
             AFY+G+TC+GSG+ILESW D+GFPVC +ALE+A +EDKSKLG+P+KIKVKPE+      
Sbjct: 433  TAFYQGRTCIGSGVILESWDDKGFPVCQKALELARLEDKSKLGKPVKIKVKPETSDQESV 492

Query: 1483 HDDAIE 1500
              D IE
Sbjct: 493  QKDGIE 498


>ref|XP_004301461.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Fragaria vesca
            subsp. vesca]
          Length = 475

 Score =  616 bits (1589), Expect = e-173
 Identities = 296/439 (67%), Positives = 341/439 (77%), Gaps = 1/439 (0%)
 Frame = +1

Query: 151  KFFSVASADLHTSSPSSTFSTGALLDPYLSCSMPGKS-LKXXXXXXXXXXXXXXXXXXHY 327
            K FS+++A      P    S    +  YLSCSMP K  LK                  H 
Sbjct: 37   KSFSISAAISQNPEPPPN-SINVDIGSYLSCSMPHKKPLKVAVLLSGGVDSSVALRLLHA 95

Query: 328  AGHSCTAFYLKIWFQEDFENFWSACPWDEDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVS 507
            AGHSCTAFYLKIWFQE FENFWS CPW+EDL YA+AVC QV +PLEVVHLT+EYWKNVVS
Sbjct: 96   AGHSCTAFYLKIWFQEGFENFWSECPWEEDLNYAKAVCNQVDVPLEVVHLTDEYWKNVVS 155

Query: 508  YIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSLEFDYVASGHYARLLHSSLGQRDGISV 687
            YIIEEYRCGRTPNPDVLCNTRIKFG FMDAI S+EFDYVASGHYA+++H S  Q D  SV
Sbjct: 156  YIIEEYRCGRTPNPDVLCNTRIKFGVFMDAIDSMEFDYVASGHYAKVVHLSADQTDKDSV 215

Query: 688  LELSEDMVKDQTYFXXXXXXXXXXXXXFPLGCICKNEVRRIAAELNLPNRDRKDSQGICF 867
            LELS+DMVKDQTYF             FPLGC+ K++VR++A + +LPN++RKDSQGICF
Sbjct: 216  LELSQDMVKDQTYFLSHLSQDQLKKLIFPLGCLSKDKVRKLATKFDLPNKERKDSQGICF 275

Query: 868  LGKIKFSEFVARHIGEMEGVLLEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKD 1047
            LGK++FSEF+ +HIGE EGV+LEAETGD LGKHRGFWFYTIGQRQGLRLPGGPWYVV KD
Sbjct: 276  LGKVRFSEFIGKHIGEKEGVILEAETGDLLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKD 335

Query: 1048 VRNNVVFVSRNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEP 1227
            +++NVVFVSRNY+S DK+RR F VGSL WL GSPP    QLQCKVRHGP F +C++ +E 
Sbjct: 336  IKHNVVFVSRNYYSVDKRRRLFRVGSLKWLHGSPPAQISQLQCKVRHGPRFCNCTVKIEH 395

Query: 1228 DEDGQAASAVVHISEDDQGLAAGQFAAFYRGKTCLGSGIILESWGDEGFPVCARALEIAG 1407
             EDG    AVV +SEDDQGLAAGQFAAFY+G+TCLGSG+ILESW D+GFPVC +ALE A 
Sbjct: 396  GEDGNEDVAVVSLSEDDQGLAAGQFAAFYQGRTCLGSGVILESWDDQGFPVCTKALENAR 455

Query: 1408 MEDKSKLGQPIKIKVKPES 1464
            MEDKS LG+P+KIK  PE+
Sbjct: 456  MEDKSLLGKPVKIKFIPEA 474


>ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Capsella rubella]
            gi|482549064|gb|EOA13258.1| hypothetical protein
            CARUB_v10026287mg [Capsella rubella]
          Length = 494

 Score =  615 bits (1587), Expect = e-173
 Identities = 296/457 (64%), Positives = 347/457 (75%)
 Frame = +1

Query: 88   IFFAPLKRTLLRHTSNLRTPPKFFSVASADLHTSSPSSTFSTGALLDPYLSCSMPGKSLK 267
            +F  PL    +  +S+L   P+  +  +  L +S   S  S   ++D YLSCSMP K L+
Sbjct: 23   LFRLPLSSFSMFFSSSLLPAPQSSNPVTPLLSSSRNCS--SQAFIVDQYLSCSMPEKPLR 80

Query: 268  XXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDLKYAEAVCKQ 447
                              H AGHSCTAFYLKIWFQE FENFW+ CPW++DLKYA+ VC+Q
Sbjct: 81   VAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKYAKHVCEQ 140

Query: 448  VGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSLEFDYVA 627
            V +PLEVVHLT+EYW+ VVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAIS +E+DYVA
Sbjct: 141  VNVPLEVVHLTDEYWEKVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISDMEYDYVA 200

Query: 628  SGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLGCICKNEVRR 807
            SGHYA+++H    Q D  S+LELS+DMVKDQTYF             FPLGC+ K+EVR+
Sbjct: 201  SGHYAKVVHPPADQNDSSSLLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCVKKDEVRK 260

Query: 808  IAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLGKHRGFWFYT 987
            +A + +LPN+DRKDSQGICFLGKIKFS+FV  HIGEMEGV+LEAETGDFLG HRGFWFYT
Sbjct: 261  LATQFDLPNKDRKDSQGICFLGKIKFSDFVGTHIGEMEGVILEAETGDFLGNHRGFWFYT 320

Query: 988  IGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLSGSPPDHFDQ 1167
            IGQRQGLRLPGGPWYVV KD +NNVVFVSRNY+S DKKRR F VGSL WL G P D+  +
Sbjct: 321  IGQRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKKRRIFRVGSLRWLCGKPSDNVSK 380

Query: 1168 LQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRGKTCLGSGII 1347
            L+CKVRHGPGFYSCS  +E   D     AVVH+ EDDQGLAAGQFAAFY G TC+GSG+I
Sbjct: 381  LRCKVRHGPGFYSCSFEMEAKGD----VAVVHLDEDDQGLAAGQFAAFYEGTTCIGSGVI 436

Query: 1348 LESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKP 1458
            LESW D+ FPVCA+AL++A MEDK+KLG+P+KI   P
Sbjct: 437  LESWDDQCFPVCAKALQLAAMEDKTKLGKPVKILTMP 473


>ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis lyrata subsp. lyrata]
            gi|297340151|gb|EFH70568.1| tRNA
            (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score =  614 bits (1583), Expect = e-173
 Identities = 299/469 (63%), Positives = 347/469 (73%), Gaps = 16/469 (3%)
 Frame = +1

Query: 100  PLKRTLLRHTS-NLRTPPKFFSVASADLHTSSPSSTFST---------------GALLDP 231
            PL R  L   S + R  P FFS + +   +  PS   S                  LLD 
Sbjct: 15   PLFRLPLSSISISFRVFPSFFSSSPSSSSSLLPSPQSSDPITPLLSSGLNYSRHAFLLDQ 74

Query: 232  YLSCSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWD 411
            YLSCSMP K L+                  H AGHSCTAFYLKIWFQE FENFW+ CPW+
Sbjct: 75   YLSCSMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWE 134

Query: 412  EDLKYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFM 591
            +DLKYA+ VC+QV +PLEVVHLT+EYW+ VVSYIIEEYRCGRTPNPDVLCNTRIKFGAFM
Sbjct: 135  DDLKYAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFM 194

Query: 592  DAISSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXF 771
            DAIS +E+DYV SGHYA+++H  + Q D  SVLELS+DMVKDQTYF             F
Sbjct: 195  DAISDMEYDYVGSGHYAKVVHPPVDQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLIF 254

Query: 772  PLGCICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGD 951
            PLGC+ K+EVR++A + +LPN+DRKDSQGICFLGKIKFS+FV  HIGEMEG++LEAETGD
Sbjct: 255  PLGCVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCAHIGEMEGIILEAETGD 314

Query: 952  FLGKHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLN 1131
            FLG HRGFWFYTIGQRQGLRLPGGPWYVV KD +NNVVFVSRNY+S DK+RR F VGSL 
Sbjct: 315  FLGNHRGFWFYTIGQRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLR 374

Query: 1132 WLSGSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAF 1311
            WLSG P  +  +L+CKVRHGP FYSCS  +E D D     AVVH+ EDDQGLAAGQFAAF
Sbjct: 375  WLSGKPSGNVRELRCKVRHGPSFYSCSFEMEADGD----VAVVHLDEDDQGLAAGQFAAF 430

Query: 1312 YRGKTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKP 1458
            Y G TC+GSG+ILESW D+ FPVCA+AL++A MEDK+KLG+P+KI+  P
Sbjct: 431  YEGTTCIGSGVILESWDDQCFPVCAKALQLAAMEDKTKLGKPVKIRTMP 479


>ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Capsella rubella]
            gi|482576032|gb|EOA40219.1| hypothetical protein
            CARUB_v10008942mg [Capsella rubella]
          Length = 496

 Score =  613 bits (1580), Expect = e-172
 Identities = 297/465 (63%), Positives = 349/465 (75%)
 Frame = +1

Query: 64   RSNLRCFSIFFAPLKRTLLRHTSNLRTPPKFFSVASADLHTSSPSSTFSTGALLDPYLSC 243
            R  L  FSI F    R+    +S+L   P+  +  +    +S   S  +   ++D YLSC
Sbjct: 18   RLPLSSFSISFRGF-RSFFSSSSSLLPAPQSSNPVTPLFSSSRDCSRHAF--IVDQYLSC 74

Query: 244  SMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDLK 423
            SMP K L+                  H AGHSCTAFYLKIWFQE FENFW  CPW++DLK
Sbjct: 75   SMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWDQCPWEDDLK 134

Query: 424  YAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAIS 603
            YA+ VC+QVG+PLEVVHLT+EYW+ VVSY+IEEYRCGRTPNPDVLCNTRIKFGAFMDAIS
Sbjct: 135  YAKHVCEQVGVPLEVVHLTDEYWERVVSYLIEEYRCGRTPNPDVLCNTRIKFGAFMDAIS 194

Query: 604  SLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLGC 783
             +E+DYVASGHYA+++H    Q D  S+LELS+DMVKDQTYF             FPLGC
Sbjct: 195  DMEYDYVASGHYAKVVHPPADQNDSSSLLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGC 254

Query: 784  ICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLGK 963
            + K+EVR++A + +LPN+DRKDSQGICFLGKIKFS+FV RHIGEMEGV+LEAETGDFLG 
Sbjct: 255  VKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVGRHIGEMEGVILEAETGDFLGN 314

Query: 964  HRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLSG 1143
            HRGFWFYTIGQRQGLRLPGGPWYVV KD +NNVVF SRNY+S DK+RR F VGSL WLSG
Sbjct: 315  HRGFWFYTIGQRQGLRLPGGPWYVVEKDTKNNVVFASRNYYSIDKRRRVFRVGSLRWLSG 374

Query: 1144 SPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRGK 1323
             P  +  +L+CKVRHGPGFYSCS  +E   D     AVVH+ EDDQGLAAGQFAAFY G 
Sbjct: 375  KPSANVSELRCKVRHGPGFYSCSFEMETKGD----VAVVHLDEDDQGLAAGQFAAFYEGT 430

Query: 1324 TCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKP 1458
            TC+GSG+ILESW D+ FPVCA+AL++A MEDK+KLG+P+KI   P
Sbjct: 431  TCIGSGVILESWDDQCFPVCAKALQLAAMEDKTKLGKPVKIFTIP 475


>dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]
          Length = 497

 Score =  612 bits (1578), Expect = e-172
 Identities = 299/466 (64%), Positives = 346/466 (74%), Gaps = 13/466 (2%)
 Frame = +1

Query: 100  PLKRTLLRHTS-NLRTPPKFFSVASADLHTSSPSSTFST------------GALLDPYLS 240
            PL R  L   S + R  P FFS +S+    S  SS   T              ++D YLS
Sbjct: 15   PLFRLPLSSISISFRVFPSFFSSSSSSQLPSPQSSNPITPLISSNRNYSRHAFIVDQYLS 74

Query: 241  CSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDL 420
            CSMP K L+                  H AGHSCTAFYLKIWFQE FENFW+ CPW++DL
Sbjct: 75   CSMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDL 134

Query: 421  KYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI 600
            KYA+ VC+QV +PLEVVHLT+EYW+ VVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI
Sbjct: 135  KYAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI 194

Query: 601  SSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLG 780
            S +E+DYV SGHYAR++H    Q D  SVLELS+DMVKDQTYF             FPLG
Sbjct: 195  SDMEYDYVGSGHYARVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLG 254

Query: 781  CICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLG 960
            C+ K+EVR++A + +LPN+DRKDSQGICFLGKIKFS+FV RHIGEMEG++LEAE+GDFLG
Sbjct: 255  CVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLG 314

Query: 961  KHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLS 1140
             HRGFWFYTIGQRQGLRLPGGPWYVV KD +NNVVFVSRNY+S DK+RR F VGSL W S
Sbjct: 315  NHRGFWFYTIGQRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWNS 374

Query: 1141 GSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRG 1320
            G P     +L+CKVRHGPGFYSCS  +E D D     AVVH+ EDDQGLAAGQFAAFY G
Sbjct: 375  GKPSGKVRELRCKVRHGPGFYSCSFEMEGDGD----VAVVHLDEDDQGLAAGQFAAFYEG 430

Query: 1321 KTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKP 1458
             TC+GSG+ILESW D+ FPVCA+AL++A +EDK+KLG+P+KI   P
Sbjct: 431  TTCIGSGVILESWDDQCFPVCAKALQLAALEDKTKLGKPVKIMTMP 476


>ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis thaliana] gi|332194528|gb|AEE32649.1| tRNA
            (5-methylaminomethyl-2-thiouridylate)-methyltransferase
            [Arabidopsis thaliana]
          Length = 497

 Score =  611 bits (1575), Expect = e-172
 Identities = 298/466 (63%), Positives = 346/466 (74%), Gaps = 13/466 (2%)
 Frame = +1

Query: 100  PLKRTLLRHTS-NLRTPPKFFSVASADLHTSSPSSTFST------------GALLDPYLS 240
            PL R  L   S + R  P FFS +S+    S  SS   T              ++D YLS
Sbjct: 15   PLFRLPLSSISISFRVFPSFFSSSSSSQLPSPQSSNPITPLISSNRNYSRHAFIVDQYLS 74

Query: 241  CSMPGKSLKXXXXXXXXXXXXXXXXXXHYAGHSCTAFYLKIWFQEDFENFWSACPWDEDL 420
            CSMP K L+                  H AGHSCTAFYLKIWFQE FENFW+ CPW++DL
Sbjct: 75   CSMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDL 134

Query: 421  KYAEAVCKQVGIPLEVVHLTEEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI 600
            KYA+ VC+QV +PLEVVHLT+EYW+ VVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI
Sbjct: 135  KYAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI 194

Query: 601  SSLEFDYVASGHYARLLHSSLGQRDGISVLELSEDMVKDQTYFXXXXXXXXXXXXXFPLG 780
            S +E+DYV SGHYA+++H    Q D  SVLELS+DMVKDQTYF             FPLG
Sbjct: 195  SDMEYDYVGSGHYAKVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLG 254

Query: 781  CICKNEVRRIAAELNLPNRDRKDSQGICFLGKIKFSEFVARHIGEMEGVLLEAETGDFLG 960
            C+ K+EVR++A + +LPN+DRKDSQGICFLGKIKFS+FV RHIGEMEG++LEAE+GDFLG
Sbjct: 255  CVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLG 314

Query: 961  KHRGFWFYTIGQRQGLRLPGGPWYVVGKDVRNNVVFVSRNYFSFDKKRRGFHVGSLNWLS 1140
             HRGFWFYTIGQRQGLRLPGGPWYVV KD +NNVVFVSRNY+S DK+RR F VGSL W S
Sbjct: 315  NHRGFWFYTIGQRQGLRLPGGPWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGSLRWNS 374

Query: 1141 GSPPDHFDQLQCKVRHGPGFYSCSLTLEPDEDGQAASAVVHISEDDQGLAAGQFAAFYRG 1320
            G P     +L+CKVRHGPGFYSCS  +E D D     AVVH+ EDDQGLAAGQFAAFY G
Sbjct: 375  GKPSGKVRELRCKVRHGPGFYSCSFEMEGDGD----VAVVHLDEDDQGLAAGQFAAFYEG 430

Query: 1321 KTCLGSGIILESWGDEGFPVCARALEIAGMEDKSKLGQPIKIKVKP 1458
             TC+GSG+ILESW D+ FPVCA+AL++A +EDK+KLG+P+KI   P
Sbjct: 431  TTCIGSGVILESWDDQCFPVCAKALQLAALEDKTKLGKPVKIMTMP 476


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