BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00014118
         (2315 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1217   0.0  
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1192   0.0  
ref|XP_007225297.1| hypothetical protein PRUPE_ppa001274mg [Prun...  1190   0.0  
ref|XP_007034151.1| DNA topoisomerase, type IA, core [Theobroma ...  1184   0.0  
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...  1182   0.0  
emb|CBI39422.3| unnamed protein product [Vitis vinifera]             1182   0.0  
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1164   0.0  
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1158   0.0  
ref|XP_007163790.1| hypothetical protein PHAVU_001G264300g [Phas...  1157   0.0  
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr...  1151   0.0  
ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1142   0.0  
ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1142   0.0  
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1140   0.0  
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi...  1136   0.0  
ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group] g...  1134   0.0  
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1133   0.0  
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1131   0.0  
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t...  1130   0.0  
gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indi...  1130   0.0  
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1129   0.0  

>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score = 1217 bits (3149), Expect = 0.0
 Identities = 584/711 (82%), Positives = 635/711 (89%), Gaps = 2/711 (0%)
 Frame = -3

Query: 2181 VLMVAEKPXXXXXXXXXXSGGRMSTRRG--STSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            +L VAEKP          SGG MSTRRG  ST VHEF+G FRGS A YKVTSVIGHVFSV
Sbjct: 32   ILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSV 91

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP KYQ W  TDPLDLF AP LK ESNPKAHIR+HLSQEAR CG LVLWLDCDREGENI
Sbjct: 92   DFPAKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENI 151

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            CFEV+ECTGFHG E  RRVYRARFSSVT+KDILKA+DNLVEPN DEA AVDARQEIDLKV
Sbjct: 152  CFEVVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKV 211

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAFTRFQT+YFQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FKPEKFWA+HPY+ 
Sbjct: 212  GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALHPYIT 271

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              GYELQLEWER+KLFD++VAVMFQ LV++DGI+EVT++S K+E K RPSGLNTVNLLKV
Sbjct: 272  HNGYELQLEWERNKLFDLDVAVMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVNLLKV 331

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALGFGPQ AM LAERLYTQGFISYPRTESTAYP+SFDFKSTLG Q NNPTWGD+V+ 
Sbjct: 332  ASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGDYVQK 391

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL DGF +PR+GTDAGDHPPITPM +A EDMLG+DAW+LYQY+CQHFIG+VSPDCKYVR 
Sbjct: 392  LLDDGFHRPRSGTDAGDHPPITPMRAANEDMLGNDAWKLYQYVCQHFIGTVSPDCKYVRN 451

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
            KVEFS GGE+F C GQHV   GFTS+MPW+AVNEKNLP FKKG K+++SKVEL+EG TSP
Sbjct: 452  KVEFSIGGEIFRCIGQHVIVKGFTSIMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSP 511

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PDYLSESELISLMEKNGIGTDASI VHINNICERN+VQV AGR LVPT LGI+LIRGYQC
Sbjct: 512  PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQC 571

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            IDPDLCLPDIRSFIEQQI L+AKGQ DH RVV+HVLQQF QK+ YFVKQIENMDALFEAQ
Sbjct: 572  IDPDLCLPDIRSFIEQQITLVAKGQVDHSRVVEHVLQQFKQKFIYFVKQIENMDALFEAQ 631

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FSPLADSGR LSKCGKC+RYMKYIS QPSR+YCGTCEEVYYLPQKGTIKLYKEL CPLDN
Sbjct: 632  FSPLADSGRALSKCGKCLRYMKYISTQPSRMYCGTCEEVYYLPQKGTIKLYKELTCPLDN 691

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            FELL+FS+AGP+GKSF LCPYCYN+PPFEGIDTLFGA K++++GKLGKGAG
Sbjct: 692  FELLIFSLAGPEGKSFPLCPYCYNSPPFEGIDTLFGATKTSSTGKLGKGAG 742


>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
            vesca]
          Length = 862

 Score = 1192 bits (3085), Expect = 0.0
 Identities = 572/714 (80%), Positives = 634/714 (88%)
 Frame = -3

Query: 2196 MGPPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHV 2017
            M   KVLMVAEKP          S G+MSTR+ ST VHEF+G FRG    +KVTSVIGHV
Sbjct: 1    MASNKVLMVAEKPSIALSIANVLSRGQMSTRKASTDVHEFEGTFRGYHVQFKVTSVIGHV 60

Query: 2016 FSVDFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREG 1837
            FS+DFP+ YQ W  TDPLDLF AP  K E+NPKAHIR+HLSQEARG G+LVLWLDCDREG
Sbjct: 61   FSLDFPETYQNWTVTDPLDLFQAPVRKAEANPKAHIRRHLSQEARGFGNLVLWLDCDREG 120

Query: 1836 ENICFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEID 1657
            ENICFEVI+C G H  E  R+VYRARFSSVT+KDILKA+DNLVEPN+DEALAVDARQEID
Sbjct: 121  ENICFEVIDCIG-HTNETKRKVYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEID 179

Query: 1656 LKVGVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHP 1477
            LKVGVAFTRFQT++FQGKYGNLD+ VISYGPCQTPTLGFCVQR+L I  FKPEKFW+V P
Sbjct: 180  LKVGVAFTRFQTSFFQGKYGNLDARVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSVRP 239

Query: 1476 YLMTVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNL 1297
            Y++  GYELQL+WER+KLFD++VAVMFQKLV+DDGI EVTE+S K+E K RPSGLNTVNL
Sbjct: 240  YILQSGYELQLDWERNKLFDVDVAVMFQKLVMDDGIAEVTEISEKQESKGRPSGLNTVNL 299

Query: 1296 LKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDH 1117
            LKVASSALGFGPQ AM +AERLYTQGFISYPRTESTAYP+SFDFK TLGAQVNNP WG +
Sbjct: 300  LKVASSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFKGTLGAQVNNPVWGSY 359

Query: 1116 VRALLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKY 937
            V+ LL+DG+ KPR+GTD GDHPP+TP+ SATEDMLG+DAWRLY+Y+C+HFIG+VSPDCKY
Sbjct: 360  VQRLLSDGYQKPRSGTDVGDHPPVTPLRSATEDMLGNDAWRLYEYVCKHFIGTVSPDCKY 419

Query: 936  VRTKVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGN 757
            VRTKVEFS GGE+F+C GQ V   GFTS+MPW+AVNEKNLP F KG K+++++V+L EG 
Sbjct: 420  VRTKVEFSIGGEIFHCVGQRVLVKGFTSIMPWLAVNEKNLPQFTKGEKIEVARVDLHEGM 479

Query: 756  TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRG 577
            TSPP+YLSESELISLMEKNGIGTDASISVHINNICERNYVQV AGR LVPT LGITLIRG
Sbjct: 480  TSPPEYLSESELISLMEKNGIGTDASISVHINNICERNYVQVQAGRKLVPTALGITLIRG 539

Query: 576  YQCIDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALF 397
            YQCIDPDLCLPDIRSFIEQQI L+AKGQADH RVVQHVLQQF QKYSYFVKQIENMDALF
Sbjct: 540  YQCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALF 599

Query: 396  EAQFSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCP 217
            EAQFSPLADSGR+LSKCGKC+RYMK+IS QPSRLYC TCEEVYYLPQKGTIKLYKEL CP
Sbjct: 600  EAQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGTIKLYKELTCP 659

Query: 216  LDNFELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            LDNFELL+ SM GPDGKSF+LCPYCYN+PPFEGI+TLFGA KS +SGKLGKGAG
Sbjct: 660  LDNFELLICSMPGPDGKSFSLCPYCYNSPPFEGINTLFGAAKSGSSGKLGKGAG 713


>ref|XP_007225297.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
            gi|462422233|gb|EMJ26496.1| hypothetical protein
            PRUPE_ppa001274mg [Prunus persica]
          Length = 866

 Score = 1190 bits (3079), Expect = 0.0
 Identities = 574/714 (80%), Positives = 629/714 (88%)
 Frame = -3

Query: 2196 MGPPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHV 2017
            M   KV+MVAEKP          S G+MSTR+ ST VHEF+GMF G   ++KVTSVIGHV
Sbjct: 1    MASNKVIMVAEKPSIALSIASVLSRGQMSTRKASTDVHEFEGMFLGFHVHFKVTSVIGHV 60

Query: 2016 FSVDFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREG 1837
            FSVDFP+KYQ W  TDPLDLF AP  K E+NPKAHIR+HLSQEARG G+LVLWLDCDREG
Sbjct: 61   FSVDFPEKYQNWTTTDPLDLFQAPIQKTEANPKAHIRRHLSQEARGYGNLVLWLDCDREG 120

Query: 1836 ENICFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEID 1657
            ENICFEV++C G H  E  RR+YRARFSSVT+KDILKA+DNLVEPN+DEALAVDARQEID
Sbjct: 121  ENICFEVMDCIG-HSNETRRRIYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEID 179

Query: 1656 LKVGVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHP 1477
            LKVGVAFTRFQT++FQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FKPEKFWAV P
Sbjct: 180  LKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWAVRP 239

Query: 1476 YLMTVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNL 1297
            Y+M  GYELQLEWER+KLFD +VAVMFQKLV++DGILEVTE+  K+E K RPSGLNTVNL
Sbjct: 240  YIMQKGYELQLEWERNKLFDYDVAVMFQKLVMEDGILEVTEIVEKQESKSRPSGLNTVNL 299

Query: 1296 LKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDH 1117
            LKVASSALGFGPQ AM +AERLYTQGFISYPRTESTAYP+SFDF+ TLGAQVNNPTWG +
Sbjct: 300  LKVASSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFRGTLGAQVNNPTWGSY 359

Query: 1116 VRALLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKY 937
            V+ LLADG+ KPR+GTD GDHPP+TP+ SATEDMLG+DAWRLY+YIC HF+G+VSPDCKY
Sbjct: 360  VQRLLADGYQKPRSGTDVGDHPPVTPLRSATEDMLGNDAWRLYEYICTHFMGTVSPDCKY 419

Query: 936  VRTKVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGN 757
            VRTKVEFS GGE F+C G  V   GFTS+MPW+AV EKNLP F KG K+++S+V+L EG 
Sbjct: 420  VRTKVEFSIGGEFFHCVGHRVLVKGFTSIMPWLAVTEKNLPQFTKGEKIEVSQVDLHEGM 479

Query: 756  TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRG 577
            TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQV AGR L PT LGITLIRG
Sbjct: 480  TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVLAGRKLGPTALGITLIRG 539

Query: 576  YQCIDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALF 397
            YQCIDPDLCLPDIRSFIEQQI L+AKGQADH RVVQHVLQQF QKYSYFVKQIENMDALF
Sbjct: 540  YQCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALF 599

Query: 396  EAQFSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCP 217
            EAQFSPLADSGR+LSKCGKC+RYMK+IS QPSRLYC TCEEVYYLPQKG+IKLYKEL CP
Sbjct: 600  EAQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGSIKLYKELTCP 659

Query: 216  LDNFELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            LDNFELL+FSM GPDGKSF LCPYCYN+PPFEGIDTLFGA KS  S +LGKGAG
Sbjct: 660  LDNFELLIFSMPGPDGKSFPLCPYCYNSPPFEGIDTLFGAVKSGPSSQLGKGAG 713


>ref|XP_007034151.1| DNA topoisomerase, type IA, core [Theobroma cacao]
            gi|508713180|gb|EOY05077.1| DNA topoisomerase, type IA,
            core [Theobroma cacao]
          Length = 868

 Score = 1184 bits (3064), Expect = 0.0
 Identities = 571/712 (80%), Positives = 621/712 (87%)
 Frame = -3

Query: 2190 PPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFS 2011
            PPKVLMVAEKP          S G+MSTRRGST VHEF+G F G  A+YKVTSVIGHVFS
Sbjct: 4    PPKVLMVAEKPSIALSIASVLSHGKMSTRRGSTEVHEFNGTFLGFNAHYKVTSVIGHVFS 63

Query: 2010 VDFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGEN 1831
            VDFP  YQ W  T+PLDLF A  +K ESNPKAHI +HLSQEARGCG LVLWLDCDREGEN
Sbjct: 64   VDFPASYQDWNVTNPLDLFQASVIKTESNPKAHISRHLSQEARGCGYLVLWLDCDREGEN 123

Query: 1830 ICFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLK 1651
            ICFEVIECTGFH  E  +RVYRARFSSVT+KDI KA+DNLVEPNR EALAVDARQEIDLK
Sbjct: 124  ICFEVIECTGFHMNEAKKRVYRARFSSVTEKDISKAMDNLVEPNRHEALAVDARQEIDLK 183

Query: 1650 VGVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYL 1471
            VGVAFTRFQT YFQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FKPEKFWA+ PY+
Sbjct: 184  VGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALRPYI 243

Query: 1470 MTVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLK 1291
            +  GY+LQLEW+R KLFDI+VA+MFQKLV +DGILEV +VS K+E K RPSGLNTVNLLK
Sbjct: 244  IQNGYDLQLEWKRQKLFDIDVAIMFQKLVTEDGILEVIDVSEKQESKGRPSGLNTVNLLK 303

Query: 1290 VASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVR 1111
            VASSALGFGPQTAM LAERLYTQGFISYPRTESTAYPASFDFK TL    NN  WGD+V+
Sbjct: 304  VASSALGFGPQTAMQLAERLYTQGFISYPRTESTAYPASFDFKGTLNVIANNSLWGDYVQ 363

Query: 1110 ALLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVR 931
             LLA+G+ KPR+GTDAGDHPPITPM SATED+LG DAW LYQY+CQHFIG+VSPDCKYVR
Sbjct: 364  RLLAEGYHKPRSGTDAGDHPPITPMHSATEDILGKDAWSLYQYVCQHFIGTVSPDCKYVR 423

Query: 930  TKVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTS 751
             KVEF  GGE F+C GQHVTA GFT +MPW+A+NEKNLP F KG K+++SKVEL+EG TS
Sbjct: 424  RKVEFLVGGEYFHCIGQHVTAQGFTYIMPWLAINEKNLPQFTKGEKIEVSKVELYEGETS 483

Query: 750  PPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQ 571
            PPDYLSESELISLME+N IGTDASI VHINNICERNYVQV  GR LVPT LGITLIRGYQ
Sbjct: 484  PPDYLSESELISLMERNRIGTDASIPVHINNICERNYVQVQGGRKLVPTALGITLIRGYQ 543

Query: 570  CIDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEA 391
            CIDPDLCLPDIRSFIE QI L+AKGQA+H  VVQHVLQQF QK+SYFV+QIENMDALFEA
Sbjct: 544  CIDPDLCLPDIRSFIEHQITLVAKGQANHSHVVQHVLQQFKQKFSYFVQQIENMDALFEA 603

Query: 390  QFSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLD 211
            QFSPLADSGR LSKCGKC+RYMKYIS QP RL+CGTCEEVY+LPQKGTIKLYKEL CPLD
Sbjct: 604  QFSPLADSGRALSKCGKCLRYMKYISTQPPRLFCGTCEEVYHLPQKGTIKLYKELTCPLD 663

Query: 210  NFELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            NFELL+FSM GP+GKSF LCPYCYN+PPFEG+DTLFGA +  +SGKLGKGAG
Sbjct: 664  NFELLIFSMPGPEGKSFPLCPYCYNSPPFEGMDTLFGATRIGSSGKLGKGAG 715


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223544485|gb|EEF46004.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 865

 Score = 1182 bits (3059), Expect = 0.0
 Identities = 565/714 (79%), Positives = 621/714 (86%)
 Frame = -3

Query: 2196 MGPPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHV 2017
            M PP VLMVAEKP          S G+MS+++G T VHEFDGMF G  A+YKVTSVIGH+
Sbjct: 1    MAPPVVLMVAEKPSIALSIASALSHGQMSSKKGGTEVHEFDGMFLGFQAHYKVTSVIGHI 60

Query: 2016 FSVDFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREG 1837
            FSVDFPQKYQ W   DP+DLF AP +K ESNPK HIR+HLSQEARGCG LVLWLDCDREG
Sbjct: 61   FSVDFPQKYQDWTANDPMDLFQAPIVKAESNPKVHIRRHLSQEARGCGHLVLWLDCDREG 120

Query: 1836 ENICFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEID 1657
            ENICFEVIECTGFH  +  RRVYRARFSSV +KDILKA+DNLV+PNRDEALAVDARQEID
Sbjct: 121  ENICFEVIECTGFHLNDSRRRVYRARFSSVAEKDILKAMDNLVQPNRDEALAVDARQEID 180

Query: 1656 LKVGVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHP 1477
            LKVGVAFTRFQT++FQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FKPEKFW++ P
Sbjct: 181  LKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQIATFKPEKFWSLRP 240

Query: 1476 YLMTVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNL 1297
            +L+  GY+LQLEWER +LFD++VA+MFQK V+ DGILEV ++S K+E K RPSGLNTVNL
Sbjct: 241  HLIIDGYQLQLEWERHRLFDLDVALMFQKQVLQDGILEVIDISQKQETKGRPSGLNTVNL 300

Query: 1296 LKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDH 1117
            LKVASSALGFGPQ AM LAERLYTQGFISYPRTESTAYP+SFDFKS L   +NN  WGD 
Sbjct: 301  LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSILSTLLNNSIWGDS 360

Query: 1116 VRALLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKY 937
            VR LL +G+ KPR GTDAGDHPPITP+  ATEDMLG DAWRLYQY+CQHFIGSVSPDCKY
Sbjct: 361  VRRLLVEGYHKPRLGTDAGDHPPITPIRLATEDMLGKDAWRLYQYVCQHFIGSVSPDCKY 420

Query: 936  VRTKVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGN 757
            VRTKVEFS GGE F+C GQHV   GFTS+MPW+AV EKNLP   KG K+++ ++EL EG 
Sbjct: 421  VRTKVEFSVGGEFFHCIGQHVIVEGFTSIMPWLAVTEKNLPQLVKGEKIEVLRMELLEGK 480

Query: 756  TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRG 577
            T+PPDYL+ESELISLMEKNGIGTDASI VHINNICERNYVQV AGR L PT LGITLIRG
Sbjct: 481  TTPPDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRRLAPTILGITLIRG 540

Query: 576  YQCIDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALF 397
            YQCIDPDLCLPDIRSFIEQQI L+AKGQADH RVVQHVLQQF QK++YFVKQI+NMDALF
Sbjct: 541  YQCIDPDLCLPDIRSFIEQQITLVAKGQADHSRVVQHVLQQFKQKFTYFVKQIDNMDALF 600

Query: 396  EAQFSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCP 217
            EAQFS L DSGR LSKCGKC+RYMKYIS QP RLYCGTCEEVYYLPQKGTIKLYKEL CP
Sbjct: 601  EAQFSQLVDSGRALSKCGKCLRYMKYISTQPPRLYCGTCEEVYYLPQKGTIKLYKELTCP 660

Query: 216  LDNFELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            LDNFELL+FSMAGP+GK+F LCPYCYNNPPFEG+DTLFGA+K+ N GKLGKGAG
Sbjct: 661  LDNFELLIFSMAGPEGKTFPLCPYCYNNPPFEGVDTLFGASKNGNFGKLGKGAG 714


>emb|CBI39422.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score = 1182 bits (3057), Expect = 0.0
 Identities = 567/689 (82%), Positives = 614/689 (89%), Gaps = 2/689 (0%)
 Frame = -3

Query: 2181 VLMVAEKPXXXXXXXXXXSGGRMSTRRG--STSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            +L VAEKP          SGG MSTRRG  ST VHEF+G FRGS A YKVTSVIGHVFSV
Sbjct: 48   ILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSV 107

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP KYQ W  TDPLDLF AP LK ESNPKAHIR+HLSQEAR CG LVLWLDCDREGENI
Sbjct: 108  DFPAKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENI 167

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            CFEV+ECTGFHG E  RRVYRARFSSVT+KDILKA+DNLVEPN DEA AVDARQEIDLKV
Sbjct: 168  CFEVVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKV 227

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAFTRFQT+YFQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FKPEKFWA+HPY+ 
Sbjct: 228  GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALHPYIT 287

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              GYELQLEWER+KLFD++VAVMFQ LV++DGI+EVT++S K+E K RPSGLNTVNLLKV
Sbjct: 288  HNGYELQLEWERNKLFDLDVAVMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVNLLKV 347

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALGFGPQ AM LAERLYTQGFISYPRTESTAYP+SFDFKSTLG Q NNPTWGD+V+ 
Sbjct: 348  ASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGDYVQK 407

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL DGF +PR+GTDAGDHPPITPM +A EDMLG+DAW+LYQY+CQHFIG+VSPDCKYVR 
Sbjct: 408  LLDDGFHRPRSGTDAGDHPPITPMRAANEDMLGNDAWKLYQYVCQHFIGTVSPDCKYVRN 467

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
            KVEFS GGE+F C GQHV   GFTS+MPW+AVNEKNLP FKKG K+++SKVEL+EG TSP
Sbjct: 468  KVEFSIGGEIFRCIGQHVIVKGFTSIMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSP 527

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PDYLSESELISLMEKNGIGTDASI VHINNICERN+VQV AGR LVPT LGI+LIRGYQC
Sbjct: 528  PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQC 587

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            IDPDLCLPDIRSFIEQQI L+AKGQ DH RVV+HVLQQF QK+ YFVKQIENMDALFEAQ
Sbjct: 588  IDPDLCLPDIRSFIEQQITLVAKGQVDHSRVVEHVLQQFKQKFIYFVKQIENMDALFEAQ 647

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FSPLADSGR LSKCGKC+RYMKYIS QPSR+YCGTCEEVYYLPQKGTIKLYKEL CPLDN
Sbjct: 648  FSPLADSGRALSKCGKCLRYMKYISTQPSRMYCGTCEEVYYLPQKGTIKLYKELTCPLDN 707

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFE 121
            FELL+FS+AGP+GKSF LCPYCYN+PPFE
Sbjct: 708  FELLIFSLAGPEGKSFPLCPYCYNSPPFE 736


>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score = 1164 bits (3011), Expect = 0.0
 Identities = 558/711 (78%), Positives = 619/711 (87%)
 Frame = -3

Query: 2187 PKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            PKVLMVAEKP          S  +M TRRGST VHEFDG F GSPA+++VTSVIGHVFSV
Sbjct: 6    PKVLMVAEKPSIALSIASVLSHAQMFTRRGSTEVHEFDGKFLGSPAHFRVTSVIGHVFSV 65

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP KYQ WA TDPLDLF A  +KNESNPKAHI +HLSQEARGC  LVLWLDCDREGENI
Sbjct: 66   DFPGKYQDWAATDPLDLFQAQVIKNESNPKAHICRHLSQEARGCRYLVLWLDCDREGENI 125

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            CFEVI+ TGFH  +     YRARFSSVT+KD++KALDNLV PNRDEALAVDARQEIDLKV
Sbjct: 126  CFEVIKSTGFHIND----TYRARFSSVTEKDVVKALDNLVRPNRDEALAVDARQEIDLKV 181

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAFTRFQT+YFQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FKPEKFW++HPY++
Sbjct: 182  GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHPYII 241

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              GYE+QLEW+R KLFDINVA+MFQKLV +DG+LEVTE+S K+E K RP GLNTVNLLKV
Sbjct: 242  QNGYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKV 301

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALGFGPQ AM LAERLYTQGFISYPRTESTAYP SFDF+  L AQ NNPTWG++V+ 
Sbjct: 302  ASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFRGVLSAQTNNPTWGNYVQG 361

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL +G+ KPR GTD GDHPPITPM SA EDMLG+DAW+LYQYICQHFIG+VSPDCKY+R 
Sbjct: 362  LLTNGYQKPRLGTDVGDHPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDCKYIRR 421

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
            KVEFS GGE F+CTGQHV   GFT++MPW+A+N+KN+PSF KG K+++SK+EL+EG+TSP
Sbjct: 422  KVEFSIGGESFHCTGQHVVTKGFTAIMPWLAINDKNIPSFIKGQKIEVSKLELYEGSTSP 481

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PD+L+ESELISLMEKNGIGTDASI VHINNICERNYVQV AGR LVPT LGITL+RGYQ 
Sbjct: 482  PDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTTLGITLVRGYQT 541

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            IDPDLCLPDIRSFIEQQI LIAKGQ DH  VVQHV+QQF QK+SYFVK+IE+MDALFEAQ
Sbjct: 542  IDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEAQ 601

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FS L DSGR+LSKCGKC+RYMK+IS QPSRLYCGTCEEVYYLPQKGTIKLYKEL CPLDN
Sbjct: 602  FSTLTDSGRILSKCGKCLRYMKFISTQPSRLYCGTCEEVYYLPQKGTIKLYKELSCPLDN 661

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            FELL+ SM GPDGKSF LCPYCY NPPFEGI+TL    K+  SGK+GKGAG
Sbjct: 662  FELLICSMPGPDGKSFPLCPYCYINPPFEGIETLINTAKTGTSGKIGKGAG 712


>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
            sinensis]
          Length = 867

 Score = 1158 bits (2996), Expect = 0.0
 Identities = 553/714 (77%), Positives = 616/714 (86%)
 Frame = -3

Query: 2196 MGPPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHV 2017
            M P KVLMVAEKP          SGG++ TR+ ST VHEFDGMF GS AY KVTSV+GHV
Sbjct: 1    MAPLKVLMVAEKPSIALSIATVLSGGKLYTRKASTEVHEFDGMFLGSHAYIKVTSVVGHV 60

Query: 2016 FSVDFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREG 1837
            F +DFP  YQ W  ++PLDLF AP  K ESN K HI +HL+QEARGCG LVLWLDCDREG
Sbjct: 61   FRLDFPPAYQDWNASNPLDLFQAPVHKAESNRKVHICRHLNQEARGCGHLVLWLDCDREG 120

Query: 1836 ENICFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEID 1657
            ENICFEVIECTGF   +  R+V+RARFSSVT+KDILKA+ NLVEPNR+EALAVDARQEID
Sbjct: 121  ENICFEVIECTGFQVNDARRKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQEID 180

Query: 1656 LKVGVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHP 1477
            LKVGVAFTRFQT YFQGKYGNLDS  ISYGPCQTPTLGFCVQR+L IT+FKPEKFW +HP
Sbjct: 181  LKVGVAFTRFQTTYFQGKYGNLDSRFISYGPCQTPTLGFCVQRYLQITSFKPEKFWTLHP 240

Query: 1476 YLMTVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNL 1297
            YL+  GYEL+LEWER KLFD +VA MFQKLV+ D ILEV ++S K+E K RPSGLNTVNL
Sbjct: 241  YLVQNGYELKLEWERQKLFDFDVATMFQKLVMQDRILEVIDISEKQESKVRPSGLNTVNL 300

Query: 1296 LKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDH 1117
            LKVASSALG+GPQ AM LAERLYTQGFISYPRTESTAYP+SFDF+ TL A  NNP WGD+
Sbjct: 301  LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFRGTLSALANNPVWGDY 360

Query: 1116 VRALLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKY 937
            V  LLA+G++KPR+GTDAGDHPPITPM SATEDMLG DAWRLY Y+CQHF+G+VSPDCKY
Sbjct: 361  VERLLAEGYAKPRSGTDAGDHPPITPMRSATEDMLGKDAWRLYSYVCQHFLGTVSPDCKY 420

Query: 936  VRTKVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGN 757
            +RTKV+FS G E F+C GQHVT  GFT +MPW+A+NEK +P F K  K+++SKVEL EGN
Sbjct: 421  IRTKVKFSMGAEFFHCVGQHVTVQGFTYIMPWLAINEKKIPQFTKEEKIEVSKVELHEGN 480

Query: 756  TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRG 577
            T PP+YLSESELI+LMEKNGIGTDASI VHINNICERNYVQV AGR L PT LGITLIRG
Sbjct: 481  TVPPEYLSESELITLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLAPTTLGITLIRG 540

Query: 576  YQCIDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALF 397
            YQCIDPDLCLPDIRSFIEQQI L+AKGQADH  VVQHVLQQF QKYSYFVKQIENMDALF
Sbjct: 541  YQCIDPDLCLPDIRSFIEQQITLVAKGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALF 600

Query: 396  EAQFSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCP 217
            EAQFSPL++SGR+LSKCGKC+RYMKYIS+QPSRLYC TCE+VY LPQ+GT+KLYKEL CP
Sbjct: 601  EAQFSPLSNSGRVLSKCGKCLRYMKYISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCP 660

Query: 216  LDNFELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            LDNFELL+FSMAGP+GKSF LCP+CYNNPPFEGIDTL+G   + + GKLGKGAG
Sbjct: 661  LDNFELLIFSMAGPEGKSFPLCPFCYNNPPFEGIDTLYGTTTTGSFGKLGKGAG 714


>ref|XP_007163790.1| hypothetical protein PHAVU_001G264300g [Phaseolus vulgaris]
            gi|561037254|gb|ESW35784.1| hypothetical protein
            PHAVU_001G264300g [Phaseolus vulgaris]
          Length = 862

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 555/716 (77%), Positives = 617/716 (86%)
 Frame = -3

Query: 2187 PKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            PKVLMVAEKP          S  +  TRRGST VHEFDG F GSPAY+KVTSVIGHVFSV
Sbjct: 6    PKVLMVAEKPSIALSIASVLSRNQAFTRRGSTEVHEFDGKFLGSPAYFKVTSVIGHVFSV 65

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP KYQ WA TDPLDLF +  LKNESNPKAHI +HLSQEARGC  LVLWLDCDREGENI
Sbjct: 66   DFPAKYQDWAATDPLDLFQSQVLKNESNPKAHICRHLSQEARGCRYLVLWLDCDREGENI 125

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            CFEVI+CTGF   +     YRARFSSVT+KD++KALDNLV+PN+DEALAVDARQEIDLKV
Sbjct: 126  CFEVIQCTGFKTND----TYRARFSSVTEKDVVKALDNLVKPNKDEALAVDARQEIDLKV 181

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAFTRFQT+YFQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FK EKFW++HPY++
Sbjct: 182  GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKSEKFWSLHPYII 241

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              GYE+QLEW+R KLFDINVA+MFQKLV +DG+LEVTE+S K+E K RP GLNTVNLLKV
Sbjct: 242  QSGYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKV 301

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALGFGPQ AM LAERLYTQGFISYPRTESTAYP SFDF   L AQ NNPTWG++V+ 
Sbjct: 302  ASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFLGVLSAQKNNPTWGNYVQG 361

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL  G+ KPR GTD GDHPPITPM SA EDMLG+DAW+LYQYICQHFIG+VSPDCKY+R 
Sbjct: 362  LLTAGYQKPRLGTDVGDHPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDCKYIRR 421

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
            KVEFS GGE F+CTGQHV   GFT++MPW+A+N+KN+PSF KG K+++SK+EL+EG TSP
Sbjct: 422  KVEFSIGGESFHCTGQHVVTKGFTAIMPWLALNDKNIPSFVKGQKIEVSKLELYEGITSP 481

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PDYL+ESELISLMEKNGIGTDASI VHINNICERNYVQV AGR LVPTPLGITL+RGYQ 
Sbjct: 482  PDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTPLGITLVRGYQT 541

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            IDPDLCLPDIRSFIEQQI LIAKGQ DH  VVQHV+QQF QK+SYFVK+IE+MDALFEAQ
Sbjct: 542  IDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEAQ 601

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FS L +SGR+LSKCGKC+RYMKYIS QP RLYCGTCEEVYYLPQKG IKLYKEL CPLDN
Sbjct: 602  FSTLTESGRILSKCGKCLRYMKYISTQPPRLYCGTCEEVYYLPQKGIIKLYKELSCPLDN 661

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAGHASTL 40
            FELL+ SM GPDGKSF LCPYCY+NPPFEGI+ L    K+ ++GK+GKG+G   +L
Sbjct: 662  FELLICSMPGPDGKSFPLCPYCYSNPPFEGIEALINTTKTGSAGKIGKGSGMPCSL 717


>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222861878|gb|EEE99420.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 837

 Score = 1151 bits (2977), Expect = 0.0
 Identities = 549/687 (79%), Positives = 606/687 (88%)
 Frame = -3

Query: 2115 MSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSVDFPQKYQGWADTDPLDLFNAPTLK 1936
            M +R+G+T VHEF+GMF G  AY+KVTSVIGHVFSVDFP KYQ WA TDP DLF AP  K
Sbjct: 1    MHSRKGTTEVHEFEGMFNGFRAYFKVTSVIGHVFSVDFPAKYQDWAATDPADLFQAPIHK 60

Query: 1935 NESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENICFEVIECTGFHGKEFGRRVYRARF 1756
             E+NPKAHI +HLSQEARGC  LVLWLDCDREGENICFEVI+CTGF   +  R+VYRARF
Sbjct: 61   AEANPKAHICRHLSQEARGCNHLVLWLDCDREGENICFEVIQCTGFQANDDRRKVYRARF 120

Query: 1755 SSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKVGVAFTRFQTNYFQGKYGNLDSTVI 1576
            SSVT+KDILKA++ LVEPN  EALAVDARQEIDLKVGVAFTRFQT++FQGKYGNLDS VI
Sbjct: 121  SSVTEKDILKAMNCLVEPNEYEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDSRVI 180

Query: 1575 SYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLMTVGYELQLEWERDKLFDINVAVMF 1396
            SYGPCQTPTLGFCVQR+L IT FKPEKFWA+ P++M  GYELQLEWER KLFD++VA+MF
Sbjct: 181  SYGPCQTPTLGFCVQRYLQITTFKPEKFWALRPHVMVDGYELQLEWERHKLFDLDVALMF 240

Query: 1395 QKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKVASSALGFGPQTAMHLAERLYTQGF 1216
            QKLV+ D ILEVT++S K+E K RP GLNTVNLLK+ASSALGFGPQ  M LAERLY QGF
Sbjct: 241  QKLVLQDRILEVTDMSEKQESKGRPPGLNTVNLLKIASSALGFGPQVTMQLAERLYIQGF 300

Query: 1215 ISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRALLADGFSKPRTGTDAGDHPPITPM 1036
            ISYPRTESTAYP+SFDFK TLGA  NNP WGD+V+ LL+ G+ KP++G DAGDHPPITPM
Sbjct: 301  ISYPRTESTAYPSSFDFKGTLGALANNPMWGDYVQGLLSGGYHKPQSGKDAGDHPPITPM 360

Query: 1035 GSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRTKVEFSAGGELFYCTGQHVTALGFT 856
             SA EDMLG DAWRLYQY+CQHF+G+VSPDCKY RTKVEFS GGE F+C G HVT  GFT
Sbjct: 361  RSANEDMLGRDAWRLYQYVCQHFLGTVSPDCKYTRTKVEFSIGGEFFHCIGLHVTVKGFT 420

Query: 855  SVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSPPDYLSESELISLMEKNGIGTDASI 676
            S+MPW+AV+EKNLP F KG K+++SKVELFEG T PPDYLSESELISLMEKNGIGTDASI
Sbjct: 421  SIMPWLAVSEKNLPQFAKGDKIEVSKVELFEGQTVPPDYLSESELISLMEKNGIGTDASI 480

Query: 675  SVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQCIDPDLCLPDIRSFIEQQINLIAKG 496
            SVHINNICERNYVQV AGR LVPT LGITLIRGYQCIDPDLCLPDIR FIEQQI L+AKG
Sbjct: 481  SVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQITLVAKG 540

Query: 495  QADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQFSPLADSGRLLSKCGKCVRYMKYI 316
            +ADH  VVQHVL+QF +KYSYFVKQI+NMDALFEAQFSPLADSGR  SKCGKC+RYMKYI
Sbjct: 541  EADHSCVVQHVLEQFKRKYSYFVKQIDNMDALFEAQFSPLADSGRAFSKCGKCLRYMKYI 600

Query: 315  SIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDNFELLLFSMAGPDGKSFTLCPYCYN 136
            S QPSRLYCGTCEEVYYLPQKGTIKLYKEL CPLDNFELL+F+MAGP+GKSF LCP CYN
Sbjct: 601  SSQPSRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFAMAGPEGKSFPLCPLCYN 660

Query: 135  NPPFEGIDTLFGANKSANSGKLGKGAG 55
            +PPFEGID LFGA+K+ +SG LGKGAG
Sbjct: 661  SPPFEGIDALFGASKTGSSGMLGKGAG 687


>ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Cicer
            arietinum]
          Length = 859

 Score = 1142 bits (2955), Expect = 0.0
 Identities = 551/719 (76%), Positives = 617/719 (85%)
 Frame = -3

Query: 2196 MGPPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHV 2017
            M  PKVLMVAEKP          S G+M TR+GST VHEF+G F GSPA +KVTSVIGHV
Sbjct: 1    MATPKVLMVAEKPSIALSIASVLSHGQMFTRKGSTEVHEFEGRFLGSPARFKVTSVIGHV 60

Query: 2016 FSVDFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREG 1837
            FSVDFP KYQ WA TDPLDLF A  LK ESNPKAHI KHL+QEARGC  LVLWLDCDREG
Sbjct: 61   FSVDFPGKYQDWAATDPLDLFQAQVLKTESNPKAHICKHLNQEARGCRYLVLWLDCDREG 120

Query: 1836 ENICFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEID 1657
            ENICFEVIE TGF+ K+    VYRARFS+VT+KD+LKALDNLV PNRDEA+AVDARQEID
Sbjct: 121  ENICFEVIESTGFNIKD----VYRARFSAVTEKDVLKALDNLVRPNRDEAMAVDARQEID 176

Query: 1656 LKVGVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHP 1477
            LKVGVAFTRFQT++FQGKYGNLDS VISYGPCQTPTLGFCVQR+L I  FKPEKFW++HP
Sbjct: 177  LKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHP 236

Query: 1476 YLMTVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNL 1297
            Y++  GYE+QLEW+R KLFDINVA+MFQKLV +DGI EV E+S K+E K RP GLNTVNL
Sbjct: 237  YIIQSGYEIQLEWQRSKLFDINVAMMFQKLVAEDGIFEVAEISEKQETKCRPVGLNTVNL 296

Query: 1296 LKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDH 1117
            LKVASSALGFGPQ AM LAERLYTQGFISYPRTEST+YP SFDF   L AQ NNPTWG +
Sbjct: 297  LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTSYPPSFDFHGALSAQTNNPTWGSY 356

Query: 1116 VRALLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKY 937
            V+ LL  G+ KPR GTDAGDHPPITPM SA+EDMLG+DAW+LYQYICQ+FIG+VSPDCKY
Sbjct: 357  VKGLLTSGYQKPRLGTDAGDHPPITPMKSASEDMLGNDAWKLYQYICQYFIGTVSPDCKY 416

Query: 936  VRTKVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGN 757
            VR KVEFS GGE F+CTGQHV   GFT++MPW+++N+K++PSF KG K+K++KVEL+EG+
Sbjct: 417  VRKKVEFSVGGEFFHCTGQHVITKGFTAIMPWLSINDKSIPSFTKGQKIKVTKVELYEGS 476

Query: 756  TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRG 577
            T+PPD+L+ESELISLMEKNGIGTDASI VHINNICERNYVQV AGR LVPT LGITLIRG
Sbjct: 477  TTPPDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTTLGITLIRG 536

Query: 576  YQCIDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALF 397
            YQ IDPDLCLPDIRSFIEQQI LIAKGQ DH RVVQHV++QF QK+ YFVK+IE MDALF
Sbjct: 537  YQSIDPDLCLPDIRSFIEQQITLIAKGQVDHHRVVQHVIEQFKQKFCYFVKKIEAMDALF 596

Query: 396  EAQFSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCP 217
            EAQFS L DSGR+LSKCGKC+RYMKYIS QP RLYC TCEEVY LPQKGTIKLYKEL CP
Sbjct: 597  EAQFSALVDSGRILSKCGKCLRYMKYISSQPPRLYCMTCEEVYPLPQKGTIKLYKELSCP 656

Query: 216  LDNFELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAGHASTL 40
            LDNFELL+ S+ GP+GKSF LCPYCY+NPPFEG++ L  + K++ +GK GKGAG A  L
Sbjct: 657  LDNFELLICSIPGPEGKSFPLCPYCYSNPPFEGVEELINSAKTSTAGKNGKGAGMACNL 715


>ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Citrus
            sinensis] gi|568880120|ref|XP_006492983.1| PREDICTED: DNA
            topoisomerase 3-beta-1-like isoform X2 [Citrus sinensis]
          Length = 898

 Score = 1142 bits (2954), Expect = 0.0
 Identities = 553/745 (74%), Positives = 616/745 (82%), Gaps = 31/745 (4%)
 Frame = -3

Query: 2196 MGPPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHV 2017
            M P KVLMVAEKP          SGG++ TR+ ST VHEFDGMF GS AY KVTSV+GHV
Sbjct: 1    MAPLKVLMVAEKPSIALSIATVLSGGKLYTRKASTEVHEFDGMFLGSHAYIKVTSVVGHV 60

Query: 2016 FSVDFPQKYQGWADTDPLDLFNAPTLKNESNPK--------------------------- 1918
            F +DFP  YQ W  ++PLDLF AP  K ESN K                           
Sbjct: 61   FRLDFPPAYQDWNASNPLDLFQAPVHKAESNRKYLGVLINNLFEILASVYILCRSLGLFC 120

Query: 1917 ----AHIRKHLSQEARGCGDLVLWLDCDREGENICFEVIECTGFHGKEFGRRVYRARFSS 1750
                 HI +HL+QEARGCG LVLWLDCDREGENICFEVIECTGF   +  R+V+RARFSS
Sbjct: 121  SLLVVHICRHLNQEARGCGHLVLWLDCDREGENICFEVIECTGFQVNDARRKVHRARFSS 180

Query: 1749 VTDKDILKALDNLVEPNRDEALAVDARQEIDLKVGVAFTRFQTNYFQGKYGNLDSTVISY 1570
            VT+KDILKA+ NLVEPNR+EALAVDARQEIDLKVGVAFTRFQT YFQGKYGNLDS  ISY
Sbjct: 181  VTEKDILKAMGNLVEPNRNEALAVDARQEIDLKVGVAFTRFQTTYFQGKYGNLDSRFISY 240

Query: 1569 GPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLMTVGYELQLEWERDKLFDINVAVMFQK 1390
            GPCQTPTLGFCVQR+L IT+FKPEKFW +HPYL+  GYEL+LEWER KLFD +VA MFQK
Sbjct: 241  GPCQTPTLGFCVQRYLQITSFKPEKFWTLHPYLVQNGYELKLEWERQKLFDFDVATMFQK 300

Query: 1389 LVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKVASSALGFGPQTAMHLAERLYTQGFIS 1210
            LV+ D ILEV ++S K+E K RPSGLNTVNLLKVASSALG+GPQ AM LAERLYTQGFIS
Sbjct: 301  LVMQDRILEVIDISEKQESKVRPSGLNTVNLLKVASSALGYGPQMAMQLAERLYTQGFIS 360

Query: 1209 YPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRALLADGFSKPRTGTDAGDHPPITPMGS 1030
            YPRTESTAYP+SFDF+ TL A  NNP WGD+V  LLA+G++KPR+GTDAGDHPPITPM S
Sbjct: 361  YPRTESTAYPSSFDFRGTLSALANNPVWGDYVERLLAEGYAKPRSGTDAGDHPPITPMRS 420

Query: 1029 ATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRTKVEFSAGGELFYCTGQHVTALGFTSV 850
            ATEDMLG DAWRLY Y+CQHF+G+VSPDCKY+RTKV+FS G E F+C GQHVT  GFT +
Sbjct: 421  ATEDMLGKDAWRLYSYVCQHFLGTVSPDCKYIRTKVKFSMGAEFFHCVGQHVTVQGFTYI 480

Query: 849  MPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSPPDYLSESELISLMEKNGIGTDASISV 670
            MPW+A+NEK +P F K  K+++SKVEL EGNT PP+YLSESELI+LMEKNGIGTDASI V
Sbjct: 481  MPWLAINEKKIPQFTKEEKIEVSKVELHEGNTVPPEYLSESELITLMEKNGIGTDASIPV 540

Query: 669  HINNICERNYVQVHAGRTLVPTPLGITLIRGYQCIDPDLCLPDIRSFIEQQINLIAKGQA 490
            HINNICERNYVQV AGR L PT LGITLIRGYQCIDPDLCLPDIRSFIEQQI L+AKGQA
Sbjct: 541  HINNICERNYVQVQAGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQA 600

Query: 489  DHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQFSPLADSGRLLSKCGKCVRYMKYISI 310
            DH  VVQHVLQQF QKYSYFVKQIENMDALFEAQFSPL++SGR+LSKCGKC+RYMKYIS+
Sbjct: 601  DHSGVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKCLRYMKYISM 660

Query: 309  QPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDNFELLLFSMAGPDGKSFTLCPYCYNNP 130
            QPSRLYC TCE+VY LPQ+GT+KLYKEL CPLDNFELL+FSMAGP+GKSF LCP+CYNNP
Sbjct: 661  QPSRLYCSTCEDVYNLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFPLCPFCYNNP 720

Query: 129  PFEGIDTLFGANKSANSGKLGKGAG 55
            PFEGIDTL+G   + + GKLGKGAG
Sbjct: 721  PFEGIDTLYGTTTTGSFGKLGKGAG 745


>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 867

 Score = 1140 bits (2950), Expect = 0.0
 Identities = 551/715 (77%), Positives = 612/715 (85%), Gaps = 1/715 (0%)
 Frame = -3

Query: 2196 MGPPKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHV 2017
            M  P VLMVAEKP          S G+MSTR+GST VHEFDG F G  AYYKVTSVIGHV
Sbjct: 1    MVAPTVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHV 60

Query: 2016 FSVDFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREG 1837
            FS+DF   +Q W  TDPLDLF A  +K ESNPKAHI +HLS+EARGC  LVLWLDCDREG
Sbjct: 61   FSIDFQAGFQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREG 120

Query: 1836 ENICFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEID 1657
            ENICFEVIECTGF G    ++VYRARFSSVT+KDILKALDNLVEPNR+EALAVDARQEID
Sbjct: 121  ENICFEVIECTGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 1656 LKVGVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHP 1477
            LKVGVAFTRFQT +FQGKYGNLDS +ISYGPCQTPTLGFCVQRHL IT FKPEKFW+V P
Sbjct: 181  LKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 1476 YLMTVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNL 1297
            Y++  GYEL L+WER KLFD +V  MFQK V++DGI EVTE+S K+E K RPSGLNTVNL
Sbjct: 241  YILQTGYELNLDWERGKLFDCDVTAMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNL 300

Query: 1296 LKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDH 1117
            LKVASSALGFGPQ AM LAERLYTQGFISYPRTESTAYP+SFDFK TL   V NP WGD+
Sbjct: 301  LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDY 360

Query: 1116 VRALLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKY 937
            VR LL+DG+SKPR+GTD GDHPPITPM  ATEDMLG DAWRLYQY+CQHFIGS+S DCKY
Sbjct: 361  VRMLLSDGYSKPRSGTDVGDHPPITPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 936  VRTKVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGN 757
            +RTK++FS  GE+F CTG  VT  GFTS+MPW+AVNEK LP F KG K+++++V+L++GN
Sbjct: 421  IRTKIQFSIAGEIFNCTGSRVTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGN 480

Query: 756  TSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRG 577
            T+PPDYLSESELISLMEK+GIGTDASI VHINNI ERNYVQV AGR LVPT LGITLIRG
Sbjct: 481  TTPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 576  YQCIDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALF 397
            YQCIDPDLCLPDIRSFIE QI L+AKGQADH  VVQ VLQQF QKYSYFVK+I++MDALF
Sbjct: 541  YQCIDPDLCLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALF 600

Query: 396  EAQFSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCP 217
            EAQFSPLADSGR LSKCGKC+RYMK+IS QP RLYCG CEEVYYLPQKGTIKLYKEL CP
Sbjct: 601  EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCP 660

Query: 216  LDNFELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANK-SANSGKLGKGAG 55
            LDNFELL++S+ GP+GKSF LCPYCYN+PPFEGI+TL+GA+K + +SG   KG G
Sbjct: 661  LDNFELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMG 715


>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327049|gb|EFH57469.1| DNA topoisomerase family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score = 1136 bits (2938), Expect = 0.0
 Identities = 546/717 (76%), Positives = 621/717 (86%), Gaps = 1/717 (0%)
 Frame = -3

Query: 2187 PKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            P+VLMVAEKP          S G+MSTRRGST VHEFDGMFRG  A+Y+VTSVIGHVFSV
Sbjct: 5    PRVLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSV 64

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP+KYQ WA  DP DLF+AP LK ESNPKAHI +HLS EARGC  +VLWLDCDREGENI
Sbjct: 65   DFPEKYQNWATIDPQDLFDAPILKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENI 124

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            CFEVIE TGF  K+  R+VYRARFSSVT+KDI KA+DNLVEPNRDEALAVDARQEIDLKV
Sbjct: 125  CFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKV 184

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAF+RFQT+YFQGKY NLD  VISYGPCQTPTLGFCVQR++HI  FKPEKFWA+ PY++
Sbjct: 185  GVAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYII 244

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              GYELQLEWER +LFD+  A +FQKLVV+    +V +VS K+E K RP+GLNTV+LLKV
Sbjct: 245  KDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVSLLKV 304

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYP+SFDF  TL AQV+NP WG +V+ 
Sbjct: 305  ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQR 364

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL+DGF KP++GTDAGDHPPITPM +ATE M+G DAWRLYQY+CQHFIG+VSP+CKY+RT
Sbjct: 365  LLSDGFHKPKSGTDAGDHPPITPMRAATEVMVGGDAWRLYQYVCQHFIGTVSPNCKYIRT 424

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
            KVE S GGE F+CTGQ VT  GFT++MPW AV+EK LPSF KG ++++ +VEL+EGNT+P
Sbjct: 425  KVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVIRVELYEGNTAP 484

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PDYL+ESELISLMEK+GIGTDASI VHINNI ERNYVQV AGR LVPT LGITLIRGYQC
Sbjct: 485  PDYLTESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTALGITLIRGYQC 544

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            IDPDLCLPDIRSFIEQQI L+AKGQADH  VVQHV+QQF +K+SYFV+QIE+MDALFEAQ
Sbjct: 545  IDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQ 604

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FSPLADSGR LSKCGKC+RYMK+I+  P RL+CGTCEEVYYLPQKGTIKLYKEL CPLDN
Sbjct: 605  FSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTIKLYKELTCPLDN 664

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANS-GKLGKGAGHASTL 40
            FEL+++S+ GP+GKSF LCPYCYN+PPFEGIDTLFGA+K+ N+  K   G+G   +L
Sbjct: 665  FELVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGSGMPCSL 721


>ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group]
            gi|113631811|dbj|BAF25492.1| Os09g0500600 [Oryza sativa
            Japonica Group] gi|215695029|dbj|BAG90220.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 866

 Score = 1134 bits (2933), Expect = 0.0
 Identities = 539/711 (75%), Positives = 613/711 (86%)
 Frame = -3

Query: 2187 PKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            P VLMVAEKP          SGGRMSTR+GST VHEFDGMF+GS A++KVTSVIGHV SV
Sbjct: 3    PTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVLSV 62

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP  YQ W  TDP+DLF AP L++E NPKAHIR+HL+QEARGC  LVLWLDCDREGENI
Sbjct: 63   DFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQEARGCTYLVLWLDCDREGENI 122

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            C+EVI+CTG    E GRR++RA+FSSVT+KDI+ A++NLV P++DEALAVDARQEIDLKV
Sbjct: 123  CYEVIDCTGIPKSEVGRRIFRAKFSSVTEKDIMDAMNNLVLPSKDEALAVDARQEIDLKV 182

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAFTRFQT YFQGKYGNLDS VISYGPCQTPTLGFCVQR+  IT FKPEKFW++  Y++
Sbjct: 183  GVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTYVI 242

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              G E+QLEW+R KLFD +V VMFQK+V  DGIL+VT++SVKEE K RP GLNTVNLLKV
Sbjct: 243  KDGNEIQLEWDRKKLFDFDVTVMFQKMVASDGILKVTDISVKEECKARPPGLNTVNLLKV 302

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALG GPQTAMHLAERLYTQGFISYPRTESTAYP+SFDF+S L A  +NP W + VR 
Sbjct: 303  ASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRSALAALAHNPLWSNDVRT 362

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL  GF KP+ G DAGDHPPITPM  ATE+ LG+DAWRLYQYICQHFIG+VSPDC+Y RT
Sbjct: 363  LLDTGFVKPKQGHDAGDHPPITPMRLATEEALGTDAWRLYQYICQHFIGTVSPDCRYTRT 422

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
             +EF++GGE F+C G  VT+ GFTS+MPW+AV+E N+P++KKG  + I KV+++EG+T+P
Sbjct: 423  SIEFTSGGETFHCVGNRVTSKGFTSIMPWLAVSENNIPAYKKGDAVSIHKVDIYEGSTTP 482

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PDYLSESELISLMEKNGIGTDASI VH+NNICERNYVQV++GR LVPTPLG TLIRGYQC
Sbjct: 483  PDYLSESELISLMEKNGIGTDASIPVHVNNICERNYVQVNSGRRLVPTPLGTTLIRGYQC 542

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            ID DLCLPDIR FIEQQI LIAKG+ADH++VVQHVLQQF +KYSYFVK+IENMDALFEAQ
Sbjct: 543  IDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQFMKKYSYFVKKIENMDALFEAQ 602

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FSPLADSGRLLSKCGKC RYMKYIS QP RLYC TCEEVYYLPQ G+IKLYKE++CPLD 
Sbjct: 603  FSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEVYYLPQNGSIKLYKEIICPLDG 662

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            FELLLFSM GPD KSF LCP+CYN+PPFEGID LFGA K  ++GK+GKGAG
Sbjct: 663  FELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALKLDDTGKVGKGAG 713


>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
            tuberosum]
          Length = 860

 Score = 1133 bits (2931), Expect = 0.0
 Identities = 544/711 (76%), Positives = 610/711 (85%)
 Frame = -3

Query: 2187 PKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            PKVLMVAEKP          SG  +STRRGST VHEFD MF GS A+YKVTSVIGHVFSV
Sbjct: 3    PKVLMVAEKPSIALSIASVLSGAHVSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVFSV 62

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP  +Q W  T+P DLF AP LK E+NPKAHI +HLSQEARGC  LVLWLDCDREGENI
Sbjct: 63   DFPAAFQDWTTTNPSDLFQAPILKKETNPKAHICRHLSQEARGCTHLVLWLDCDREGENI 122

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
             FEVIECTGFH  + GRR+YRARFSSVT+KDILKA++NLVEPNRDEAL+VDARQEIDLKV
Sbjct: 123  SFEVIECTGFHTSD-GRRIYRARFSSVTEKDILKAMNNLVEPNRDEALSVDARQEIDLKV 181

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GV+FTRFQT+YF GKYGNLD+ VISYGPCQTPTLGFCV R+L IT FKPEKFW +HPY+M
Sbjct: 182  GVSFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRYLQITMFKPEKFWMLHPYIM 241

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              GYEL+LEWER +LFD +V+ MF+  +++DGI++V  VS K E K RPSGLNTVNLLKV
Sbjct: 242  YKGYELKLEWERSRLFDADVSAMFRNRIIEDGIMKVVRVSEKLESKARPSGLNTVNLLKV 301

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALGFGPQ  M LAERLYTQGFISYPRTESTAYP+SFDFK TLGA V+NP +G + + 
Sbjct: 302  ASSALGFGPQLTMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQK 361

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL + ++KPR GTDAGDHPPITPM SA+ED LG+DAW+LYQYICQHF+G++SPDCKY R 
Sbjct: 362  LLTESYNKPRAGTDAGDHPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRRI 421

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
            KVEF +GGE F C GQ  T  GFTS+MPW+A++EKNLP F  G K++ISK EL EGNTSP
Sbjct: 422  KVEFESGGEQFQCVGQLATVKGFTSIMPWLAISEKNLPEFAVGEKIEISKAELDEGNTSP 481

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PDYL+ESELISLMEK+GIGTDASISVHINNICERNYVQV AGR L PTPLGI+LIRGYQC
Sbjct: 482  PDYLTESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQC 541

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            ID DLCLPDIRSFIE QI L+AKGQADH  VVQHVL+QF +K+SYFVKQI+NMDALFEAQ
Sbjct: 542  IDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQ 601

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FSPL+DSGRLLSKCGKC+RYMKYIS QP+RLYCGTCEEVYY+PQKGT+KLYKEL CPLDN
Sbjct: 602  FSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDN 661

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            FELLL SM GP+GKSF LCPYC+N PPFEGIDT FGA K+ +S KLGKG G
Sbjct: 662  FELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVG 712


>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 864

 Score = 1131 bits (2926), Expect = 0.0
 Identities = 545/707 (77%), Positives = 607/707 (85%), Gaps = 1/707 (0%)
 Frame = -3

Query: 2172 VAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSVDFPQK 1993
            VAEKP          S G+MSTR+GST VHEFDG F G  AYYKVTSVIGHVFS+DF   
Sbjct: 6    VAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHVFSIDFQAG 65

Query: 1992 YQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENICFEVI 1813
            +Q W  TDPLDLF A  +K ESNPKAHI +HLS+EARGC  LVLWLDCDREGENICFEVI
Sbjct: 66   FQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREGENICFEVI 125

Query: 1812 ECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKVGVAFT 1633
            EC+GF G    ++VYRARFSSVT+KDILKALDNLVEPNR+EALAVDARQEIDLKVGVAFT
Sbjct: 126  ECSGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEIDLKVGVAFT 185

Query: 1632 RFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLMTVGYE 1453
            RFQT +FQGKYGNLDS +ISYGPCQTPTLGFCVQRHL IT FKPEKFW+V PY++  GYE
Sbjct: 186  RFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCPYILQTGYE 245

Query: 1452 LQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKVASSAL 1273
            L L+WER KLFD +V  MFQK V++DGI EVTE+S K+E K RPSGLNTVNLLKVASSAL
Sbjct: 246  LNLDWERGKLFDCDVTAMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNLLKVASSAL 305

Query: 1272 GFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRALLADG 1093
            GFGPQ AM LAERLYTQGFISYPRTESTAYP+SFDFK TL   V NP WGD+VR LL+DG
Sbjct: 306  GFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDYVRMLLSDG 365

Query: 1092 FSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRTKVEFS 913
            +SKPR+GTD GDHPPITPM  ATEDMLG DAWRLYQY+CQHFIGS+S DCKY+RTK++FS
Sbjct: 366  YSKPRSGTDVGDHPPITPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKIQFS 425

Query: 912  AGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSPPDYLS 733
              GE+F CTG  VT  GFTS+MPW+AVNEK LP F KG K+++++V+L++GNT+PPDYLS
Sbjct: 426  IAGEIFNCTGSRVTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGNTTPPDYLS 485

Query: 732  ESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQCIDPDL 553
            ESELISLMEK+GIGTDASI VHINNI ERNYVQV AGR LVPT LGITLIRGYQCIDPDL
Sbjct: 486  ESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRGYQCIDPDL 545

Query: 552  CLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQFSPLA 373
            CLPDIRSFIE QI L+AKGQADH  VVQ VLQQF QKYSYFVK+I++MDALFEAQFSPLA
Sbjct: 546  CLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALFEAQFSPLA 605

Query: 372  DSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDNFELLL 193
            DSGR LSKCGKC+RYMK+IS QP RLYCG CEEVYYLPQKGTIKLYKEL CPLDNFELL+
Sbjct: 606  DSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCPLDNFELLI 665

Query: 192  FSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANK-SANSGKLGKGAG 55
            +S+ GP+GKSF LCPYCYN+PPFEGI+TL+GA+K + +SG   KG G
Sbjct: 666  YSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMG 712


>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 865

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 541/716 (75%), Positives = 619/716 (86%), Gaps = 1/716 (0%)
 Frame = -3

Query: 2184 KVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSVD 2005
            +VLMVAEKP          S G+MSTRRGST VHEFDGMFRG  A+Y+VTSVIGHVFSVD
Sbjct: 6    RVLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVD 65

Query: 2004 FPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENIC 1825
            FP+KYQ WA  DP DLF+AP +K ESNPKAHI +HLS EARGC  +VLWLDCDREGENIC
Sbjct: 66   FPEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENIC 125

Query: 1824 FEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKVG 1645
            FEVIE TGF  K+  R+VYRARFSSVT+KDI KA+DNLVEPNRDEALAVDARQEIDLKVG
Sbjct: 126  FEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKVG 185

Query: 1644 VAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLMT 1465
            VAF+RFQT+YFQGKY NLD  VISYGPCQTPTLGFCVQR++HI  FKPEKFWA+ PY+  
Sbjct: 186  VAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYIRK 245

Query: 1464 VGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKVA 1285
             GYELQLEWER +LFD+  A +FQKLVV+    +V +VS K+E K RP+GLNTVNLLKVA
Sbjct: 246  DGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLLKVA 305

Query: 1284 SSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRAL 1105
            SSALGFGPQTAMHLAERLYTQGFISYPRTESTAYP+SFDF  TL AQV+NP WG +V+ L
Sbjct: 306  SSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRL 365

Query: 1104 LADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRTK 925
            L+DGF  P++GTDAGDHPPITPM +ATE M+G DAWRLYQY+CQHF+G+VSP+CKY+RTK
Sbjct: 366  LSDGFHMPKSGTDAGDHPPITPMRAATEVMVGGDAWRLYQYVCQHFLGTVSPNCKYIRTK 425

Query: 924  VEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSPP 745
            VE S GGE F+CTGQ VT  GFT++MPW AV+EK LPSF KG ++++ +VEL+EGNT+PP
Sbjct: 426  VELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVELYEGNTAPP 485

Query: 744  DYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQCI 565
            DYL+ESELISLMEK+GIGTDASI+VHINNI ERNYVQV +GR +VPT LGITLIRGYQCI
Sbjct: 486  DYLTESELISLMEKHGIGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCI 545

Query: 564  DPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQF 385
            DPDLCLPDIRSFIEQQI L+AKGQADH  VVQHV+QQF +K+SYFV+QIE+MDALFEAQF
Sbjct: 546  DPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQF 605

Query: 384  SPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDNF 205
            SPLADSGR LSKCGKC+RYMK+I+  P RL+CGTCEEVYYLPQKGT+KLYKEL CPLDNF
Sbjct: 606  SPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNF 665

Query: 204  ELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANS-GKLGKGAGHASTL 40
            EL+++S+ GP+GKSF LCPYCYN+PPFEGIDTLFGA+K+ N+  K   GAG   +L
Sbjct: 666  ELVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSL 721


>gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indica Group]
          Length = 866

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 538/711 (75%), Positives = 612/711 (86%)
 Frame = -3

Query: 2187 PKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            P VLMVAEKP          SGGRMSTR+GST VHEFDGMF+GS A++KVTSVIGHV SV
Sbjct: 3    PTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVLSV 62

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP  YQ W  TDP+DLF AP L++E NPKAHIR+HL+QEARGC  LVLWLDCDREGENI
Sbjct: 63   DFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQEARGCTYLVLWLDCDREGENI 122

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            C+EVI+CTG    E GRR++RA+FSSVT+KDI+ A++NLV P++DEALAVDARQEIDLKV
Sbjct: 123  CYEVIDCTGIPKSEVGRRIFRAKFSSVTEKDIMDAMNNLVLPSKDEALAVDARQEIDLKV 182

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAFTRFQT YFQGKYGNLDS VISYGPCQTPTLGFCVQR+  IT FKPEKFW++  Y++
Sbjct: 183  GVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTYVI 242

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              G E+QLEW+R KLFD +V VMFQK+V   GIL+VT++SVKEE K RP GLNTVNLLKV
Sbjct: 243  KDGNEIQLEWDRKKLFDFDVTVMFQKMVASYGILKVTDISVKEECKARPPGLNTVNLLKV 302

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALG GPQTAMHLAERLYTQGFISYPRTESTAYP+SFDF+S L A  +NP W + VR 
Sbjct: 303  ASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRSALAALAHNPLWSNDVRT 362

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL  GF KP+ G DAGDHPPITPM  ATE+ LG+DAWRLYQYICQHFIG+VSPDC+Y RT
Sbjct: 363  LLDTGFVKPKQGHDAGDHPPITPMRLATEEALGTDAWRLYQYICQHFIGTVSPDCRYTRT 422

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
             +EF++GGE F+C G  VT+ GFTS+MPW+AV+E N+P++KKG  + I KV+++EG+T+P
Sbjct: 423  SIEFTSGGETFHCVGNRVTSEGFTSIMPWLAVSENNIPAYKKGDAVSIHKVDIYEGSTTP 482

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            PDYLSESELISLMEKNGIGTDASI VH+NNICERNYVQV++GR LVPTPLG TLIRGYQC
Sbjct: 483  PDYLSESELISLMEKNGIGTDASIPVHVNNICERNYVQVNSGRRLVPTPLGTTLIRGYQC 542

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            ID DLCLPDIR FIEQQI LIAKG+ADH++VVQHVLQQF +KYSYFVK+IENMDALFEAQ
Sbjct: 543  IDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQFMKKYSYFVKKIENMDALFEAQ 602

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FSPLADSGRLLSKCGKC RYMKYIS QP RLYC TCEEVYYLPQ G+IKLYKE++CPLD 
Sbjct: 603  FSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEVYYLPQNGSIKLYKEIICPLDG 662

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            FELLLFSM GPD KSF LCP+CYN+PPFEGID LFGA K  ++GK+GKGAG
Sbjct: 663  FELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALKLDDTGKVGKGAG 713


>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
          Length = 864

 Score = 1129 bits (2920), Expect = 0.0
 Identities = 543/711 (76%), Positives = 607/711 (85%)
 Frame = -3

Query: 2187 PKVLMVAEKPXXXXXXXXXXSGGRMSTRRGSTSVHEFDGMFRGSPAYYKVTSVIGHVFSV 2008
            PKV MVAEKP          SG +MSTRRGST VHEFD MF GS A+YKVTSVIGHVFSV
Sbjct: 3    PKVFMVAEKPSIALSIASVLSGAQMSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVFSV 62

Query: 2007 DFPQKYQGWADTDPLDLFNAPTLKNESNPKAHIRKHLSQEARGCGDLVLWLDCDREGENI 1828
            DFP  +Q W  T+P DLF AP LK E+NPKAHI +HLSQEARGC  LVLWLDCDREGENI
Sbjct: 63   DFPAAFQDWTTTNPSDLFQAPILKKETNPKAHICRHLSQEARGCTHLVLWLDCDREGENI 122

Query: 1827 CFEVIECTGFHGKEFGRRVYRARFSSVTDKDILKALDNLVEPNRDEALAVDARQEIDLKV 1648
            CFEVIECTGFH  + GRR+YRARFSSVT+KDILKA+++L EPNRDEAL+VDARQEIDLKV
Sbjct: 123  CFEVIECTGFHTSD-GRRIYRARFSSVTEKDILKAMNSLAEPNRDEALSVDARQEIDLKV 181

Query: 1647 GVAFTRFQTNYFQGKYGNLDSTVISYGPCQTPTLGFCVQRHLHITAFKPEKFWAVHPYLM 1468
            GVAFTRFQT+YF GKYGNLD+ VISYGPCQTPTLGFCV R L IT FKPEKFW +HPY+M
Sbjct: 182  GVAFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRFLQITMFKPEKFWMLHPYIM 241

Query: 1467 TVGYELQLEWERDKLFDINVAVMFQKLVVDDGILEVTEVSVKEEYKRRPSGLNTVNLLKV 1288
              GYEL+LEWER +LFD +V+ MF+  +++D I++V  VS K E K RPSGLNTVNLLKV
Sbjct: 242  YKGYELKLEWERSRLFDADVSAMFRNRIIEDRIMKVVRVSEKLESKARPSGLNTVNLLKV 301

Query: 1287 ASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFKSTLGAQVNNPTWGDHVRA 1108
            ASSALGFGPQ  M LAERLYTQGFISYPRTESTAYP+SFDFK TLGA V+NP +G + + 
Sbjct: 302  ASSALGFGPQLTMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQK 361

Query: 1107 LLADGFSKPRTGTDAGDHPPITPMGSATEDMLGSDAWRLYQYICQHFIGSVSPDCKYVRT 928
            LL D + KPR GTDAGDHPPITPM SA+ED LG+DAW+LYQYICQHF+G++SPDCKY R 
Sbjct: 362  LLTDNYIKPRAGTDAGDHPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRRI 421

Query: 927  KVEFSAGGELFYCTGQHVTALGFTSVMPWMAVNEKNLPSFKKGVKLKISKVELFEGNTSP 748
            KVEF +GGE F C GQ  T  GFTS+MPW+A++EKNLP F  G K+++SKVEL EG+TSP
Sbjct: 422  KVEFESGGEQFQCVGQLATVKGFTSIMPWLAISEKNLPEFAVGEKIEVSKVELDEGDTSP 481

Query: 747  PDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVHAGRTLVPTPLGITLIRGYQC 568
            P YLSESELISLMEK+GIGTDASISVHINNICERNYVQV AGR L PTPLGI+LIRGYQC
Sbjct: 482  PGYLSESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQC 541

Query: 567  IDPDLCLPDIRSFIEQQINLIAKGQADHVRVVQHVLQQFAQKYSYFVKQIENMDALFEAQ 388
            ID DLCLPDIRSFIE QI L+AKGQADH  VVQHVL+QF +K+SYFVKQI+NMDALFEAQ
Sbjct: 542  IDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQ 601

Query: 387  FSPLADSGRLLSKCGKCVRYMKYISIQPSRLYCGTCEEVYYLPQKGTIKLYKELVCPLDN 208
            FSPL+DSGRLLSKCGKC+RYMKYIS QP+RLYCGTCEEVYY+PQKGT+KLYKEL CPLDN
Sbjct: 602  FSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDN 661

Query: 207  FELLLFSMAGPDGKSFTLCPYCYNNPPFEGIDTLFGANKSANSGKLGKGAG 55
            FELLL SM GP+GKSF LCPYC+N PPFEGIDT FGA K+ +S KLGKG G
Sbjct: 662  FELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVG 712