BLASTX nr result
ID: Cocculus23_contig00013400
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00013400
(1175 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006489732.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 79 4e-12
ref|XP_006414766.1| hypothetical protein EUTSA_v10024881mg [Eutr... 79 4e-12
ref|XP_006418191.1| hypothetical protein EUTSA_v10007322mg [Eutr... 79 4e-12
emb|CBI23646.3| unnamed protein product [Vitis vinifera] 79 5e-12
ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l... 79 5e-12
ref|XP_006857398.1| hypothetical protein AMTR_s00067p00141610 [A... 78 8e-12
gb|EXC35780.1| hypothetical protein L484_000700 [Morus notabilis] 77 1e-11
gb|EXC01796.1| hypothetical protein L484_021434 [Morus notabilis] 77 1e-11
ref|XP_007035117.1| Pre-mRNA splicing Prp18-interacting factor i... 77 1e-11
ref|XP_007035116.1| Pre-mRNA splicing Prp18-interacting factor i... 77 1e-11
ref|XP_006302117.1| hypothetical protein CARUB_v10020118mg [Caps... 77 1e-11
ref|XP_004242360.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik... 77 1e-11
gb|AAB60915.1| Similar to C. elegans hypothetical protein K07C5.... 77 1e-11
ref|NP_564859.2| putative step II splicing factor SMP1 [Arabidop... 77 1e-11
gb|AAF23844.1|AC007234_16 F1E22.4 [Arabidopsis thaliana] 77 1e-11
ref|XP_003552180.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik... 77 1e-11
ref|XP_003529103.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik... 77 1e-11
ref|XP_002888438.1| Pre-mRNA-splicing factor SLU7-A [Arabidopsis... 77 1e-11
ref|XP_006351675.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik... 77 1e-11
ref|XP_007146785.1| hypothetical protein PHAVU_006G069800g [Phas... 77 1e-11
>ref|XP_006489732.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SLU7-like
[Citrus sinensis]
Length = 536
Score = 79.0 bits (193), Expect = 4e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKIYQA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIYQADKYRKGACE 97
>ref|XP_006414766.1| hypothetical protein EUTSA_v10024881mg [Eutrema salsugineum]
gi|557115936|gb|ESQ56219.1| hypothetical protein
EUTSA_v10024881mg [Eutrema salsugineum]
Length = 535
Score = 79.0 bits (193), Expect = 4e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKIYQAEKYRKGAC+
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIYQAEKYRKGACQ 97
>ref|XP_006418191.1| hypothetical protein EUTSA_v10007322mg [Eutrema salsugineum]
gi|557095962|gb|ESQ36544.1| hypothetical protein
EUTSA_v10007322mg [Eutrema salsugineum]
Length = 535
Score = 79.0 bits (193), Expect = 4e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKIYQAEKYRKGAC+
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIYQAEKYRKGACQ 97
>emb|CBI23646.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 78.6 bits (192), Expect = 5e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TKAWYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKAWYDRGAKIFQADKYRKGACE 97
>ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Vitis vinifera]
Length = 537
Score = 78.6 bits (192), Expect = 5e-12
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TKAWYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKAWYDRGAKIFQADKYRKGACE 97
>ref|XP_006857398.1| hypothetical protein AMTR_s00067p00141610 [Amborella trichopoda]
gi|548861491|gb|ERN18865.1| hypothetical protein
AMTR_s00067p00141610 [Amborella trichopoda]
Length = 535
Score = 77.8 bits (190), Expect = 8e-12
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TKAWYD+GAKI+ AEKYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKAWYDRGAKIFHAEKYRKGACE 97
>gb|EXC35780.1| hypothetical protein L484_000700 [Morus notabilis]
Length = 544
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACE 97
>gb|EXC01796.1| hypothetical protein L484_021434 [Morus notabilis]
Length = 317
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACEK 1062
SLKHQRKWKSDPN TK+WYD+GAKI+ A+KYRKGACEK
Sbjct: 111 SLKHQRKWKSDPNYTKSWYDRGAKIFHADKYRKGACEK 148
>ref|XP_007035117.1| Pre-mRNA splicing Prp18-interacting factor isoform 2 [Theobroma
cacao] gi|590659404|ref|XP_007035118.1| Pre-mRNA splicing
Prp18-interacting factor isoform 2 [Theobroma cacao]
gi|508714146|gb|EOY06043.1| Pre-mRNA splicing
Prp18-interacting factor isoform 2 [Theobroma cacao]
gi|508714147|gb|EOY06044.1| Pre-mRNA splicing
Prp18-interacting factor isoform 2 [Theobroma cacao]
Length = 470
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACE 97
>ref|XP_007035116.1| Pre-mRNA splicing Prp18-interacting factor isoform 1 [Theobroma
cacao] gi|508714145|gb|EOY06042.1| Pre-mRNA splicing
Prp18-interacting factor isoform 1 [Theobroma cacao]
Length = 536
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACE 97
>ref|XP_006302117.1| hypothetical protein CARUB_v10020118mg [Capsella rubella]
gi|482570827|gb|EOA35015.1| hypothetical protein
CARUB_v10020118mg [Capsella rubella]
Length = 535
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QAEKYRKGAC+
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQ 97
>ref|XP_004242360.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Solanum lycopersicum]
Length = 536
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKIYQA++YRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIYQADEYRKGACE 97
>gb|AAB60915.1| Similar to C. elegans hypothetical protein K07C5.6 (gb|Z71181). ESTs
gb|H36844,gb|AA394956 come from this gene [Arabidopsis
thaliana]
Length = 489
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QAEKYRKGAC+
Sbjct: 63 SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQ 99
>ref|NP_564859.2| putative step II splicing factor SMP1 [Arabidopsis thaliana]
gi|150417956|sp|Q9SHY8.2|SLU7A_ARATH RecName:
Full=Pre-mRNA-splicing factor SLU7-A
gi|27754341|gb|AAO22622.1| putative step II splicing
factor [Arabidopsis thaliana] gi|332196287|gb|AEE34408.1|
Pre-mRNA splicing Prp18-interacting factor [Arabidopsis
thaliana]
Length = 535
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QAEKYRKGAC+
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQ 97
>gb|AAF23844.1|AC007234_16 F1E22.4 [Arabidopsis thaliana]
Length = 537
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QAEKYRKGAC+
Sbjct: 63 SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQ 99
>ref|XP_003552180.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Glycine max]
Length = 540
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACE 97
>ref|XP_003529103.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Glycine max]
Length = 540
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACE 97
>ref|XP_002888438.1| Pre-mRNA-splicing factor SLU7-A [Arabidopsis lyrata subsp. lyrata]
gi|297334279|gb|EFH64697.1| Pre-mRNA-splicing factor
SLU7-A [Arabidopsis lyrata subsp. lyrata]
Length = 536
Score = 77.4 bits (189), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QAEKYRKGAC+
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQ 97
>ref|XP_006351675.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Solanum tuberosum]
Length = 536
Score = 77.0 bits (188), Expect = 1e-11
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQR WKSDPN TK+WYD+GAKIYQA+KYRKGACE
Sbjct: 61 SLKHQRNWKSDPNYTKSWYDRGAKIYQADKYRKGACE 97
>ref|XP_007146785.1| hypothetical protein PHAVU_006G069800g [Phaseolus vulgaris]
gi|561020008|gb|ESW18779.1| hypothetical protein
PHAVU_006G069800g [Phaseolus vulgaris]
Length = 538
Score = 77.0 bits (188), Expect = 1e-11
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -1
Query: 1175 SLKHQRKWKSDPNCTKAWYDKGAKIYQAEKYRKGACE 1065
SLKHQRKWKSDPN TK+WYD+GAKI+QA+KYRKGACE
Sbjct: 61 SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACE 97