BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00013264
         (431 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]     126   4e-27
ref|XP_006856166.1| hypothetical protein AMTR_s00059p00175950 [A...   126   4e-27
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
emb|CBI30729.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_007225289.1| hypothetical protein PRUPE_ppa001360mg [Prun...   125   8e-27
ref|XP_002521565.1| pentatricopeptide repeat-containing protein,...   123   2e-26
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   122   4e-26
ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily p...   122   7e-26
ref|XP_003538647.2| PREDICTED: pentatricopeptide repeat-containi...   121   9e-26
ref|XP_002526706.1| pentatricopeptide repeat-containing protein,...   121   9e-26
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-25
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...   120   3e-25
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S...   119   4e-25
ref|XP_007157109.1| hypothetical protein PHAVU_002G043500g [Phas...   118   7e-25
ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prun...   118   1e-24
ref|XP_002309169.1| pentatricopeptide repeat-containing family p...   117   1e-24
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr...   117   2e-24
ref|XP_006856097.1| hypothetical protein AMTR_s00059p00132030 [A...   117   2e-24
ref|XP_002323645.2| pentatricopeptide repeat-containing family p...   117   2e-24

>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
          Length = 688

 Score =  126 bits (316), Expect = 4e-27
 Identities = 59/133 (44%), Positives = 87/133 (65%)
 Frame = -2

Query: 400 IVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLL 221
           +V R    PN+++WN++IRG   S   ++AI  Y  M  QG LPN +TFPFV KACA+L 
Sbjct: 69  LVFRHTKQPNIYVWNTVIRGLVSSHCFDDAIDFYFSMRRQGFLPNGFTFPFVLKACARLS 128

Query: 220 EPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALI 41
           +  LGL  H  ++K+G  DCD F++TSL++ YA +G +D A Q+FD    +   SW ++I
Sbjct: 129 DFQLGLRIHTHVVKVGF-DCDVFVKTSLLSLYAQTGYLDRAHQVFDEIPEKSIVSWTSII 187

Query: 40  KGYVKVGRYIDAI 2
            GY+ VGR+ +A+
Sbjct: 188 SGYIGVGRFSEAV 200



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 38/124 (30%), Positives = 65/124 (52%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           ++  W S+I GY       EA+ ++ + +E GL P+ Y    V  AC Q  + +      
Sbjct: 179 SIVSWTSIISGYIGVGRFSEAVSMFRRSIEIGLRPDGYNLVRVLSACTQSGDLSSAEWID 238

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRY 14
             + + GL   + F+ TSLV+ YA  G+++ AR +FD    +D   W+++I+GYV  G  
Sbjct: 239 RYLTENGLGR-NLFVATSLVDMYAKCGNMEKARIVFDGMPEKDVVCWSSMIQGYVLNGPA 297

Query: 13  IDAI 2
            +A+
Sbjct: 298 KEAV 301



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 38/114 (33%), Positives = 61/114 (53%)
 Frame = -2

Query: 361 WNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFHGTII 182
           W+S+I+GY  +   +EA+ L+ QM+++GL P+ +    +F ACA+L    LG      I 
Sbjct: 284 WSSMIQGYVLNGPAKEAVELFLQMLKEGLKPDCFALVGLFSACARLGALELGNWARSLID 343

Query: 181 KLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
              +    A + T+L++ YA  GS+  A ++F     +D  SWNA I G    G
Sbjct: 344 NDEILSVPA-LGTTLIDMYAKCGSVVQAWEVFKELKEKDLVSWNAAISGLAMNG 396


>ref|XP_006856166.1| hypothetical protein AMTR_s00059p00175950 [Amborella trichopoda]
           gi|548860025|gb|ERN17633.1| hypothetical protein
           AMTR_s00059p00175950 [Amborella trichopoda]
          Length = 236

 Score =  126 bits (316), Expect = 4e-27
 Identities = 61/125 (48%), Positives = 81/125 (64%)
 Frame = -2

Query: 376 PNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVF 197
           PN FMWN++IRG++ S  P+EA  LY QM+ QGL PNN+TFPFV KAC QL     G + 
Sbjct: 51  PNRFMWNTIIRGFSNSPYPKEAFFLYKQMLNQGLFPNNFTFPFVLKACTQLSSIREGKIV 110

Query: 196 HGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGR 17
           H  I KLG   C   +Q +L++ Y +SGSI +ARQLFD    ++  SWN++I GY + G 
Sbjct: 111 HTHITKLGF-TCQIVVQNALLHTYVASGSIPLARQLFDEITHKNIISWNSMIGGYSQQGH 169

Query: 16  YIDAI 2
              A+
Sbjct: 170 VDKAL 174


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  125 bits (315), Expect = 5e-27
 Identities = 62/131 (47%), Positives = 83/131 (63%)
 Frame = -2

Query: 412 YACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKAC 233
           YA SI +R+P+P N +MWN++IR YA S  PE A+ ++HQM+   +LP+ YTF F  K+C
Sbjct: 60  YAHSIFSRIPNP-NSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSC 118

Query: 232 AQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSW 53
                   G   HG ++K GL D D FIQ +L++ YAS G I+ AR L DR L RD  SW
Sbjct: 119 GSFSGVEEGRQIHGHVLKTGLGD-DLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSW 177

Query: 52  NALIKGYVKVG 20
           NAL+  Y + G
Sbjct: 178 NALLSAYAERG 188



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/113 (35%), Positives = 66/113 (58%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  WN++I GY+ +    E ++L+  M   G+ P+N T   V  ACA +   + G   H
Sbjct: 235 NVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVH 294

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKG 35
             I K G+   D F+ T+LV+ Y+  GSI+ A ++F+ CL +D ++WN++I G
Sbjct: 295 AYIDKNGIS-IDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISG 346


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  125 bits (315), Expect = 5e-27
 Identities = 62/131 (47%), Positives = 83/131 (63%)
 Frame = -2

Query: 412 YACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKAC 233
           YA SI +R+P+P N +MWN++IR YA S  PE A+ ++HQM+   +LP+ YTF F  K+C
Sbjct: 60  YAHSIFSRIPNP-NSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSC 118

Query: 232 AQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSW 53
                   G   HG ++K GL D D FIQ +L++ YAS G I+ AR L DR L RD  SW
Sbjct: 119 GSFSGVEEGRQIHGHVLKTGLGD-DLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSW 177

Query: 52  NALIKGYVKVG 20
           NAL+  Y + G
Sbjct: 178 NALLSAYAERG 188



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/113 (35%), Positives = 66/113 (58%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  WN++I GY+ +    E ++L+  M   G+ P+N T   V  ACA +   + G   H
Sbjct: 205 NVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVH 264

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKG 35
             I K G+   D F+ T+LV+ Y+  GSI+ A ++F+ CL +D ++WN++I G
Sbjct: 265 AYIDKNGIS-IDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISG 316


>ref|XP_007225289.1| hypothetical protein PRUPE_ppa001360mg [Prunus persica]
           gi|462422225|gb|EMJ26488.1| hypothetical protein
           PRUPE_ppa001360mg [Prunus persica]
          Length = 845

 Score =  125 bits (313), Expect = 8e-27
 Identities = 57/115 (49%), Positives = 87/115 (75%)
 Frame = -2

Query: 370 LFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFHG 191
           LFM+NSLIRGY+ + + +EA+LLY QMV +G+LP+ +TFPFV  AC++++  + G+  HG
Sbjct: 104 LFMYNSLIRGYSSAGLSDEAVLLYVQMVVKGILPDKFTFPFVLSACSKVVAFSEGVQLHG 163

Query: 190 TIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVK 26
            ++K+GLE+ DAFI+ SL++FYA SG +D +R++FD    R+  SW +LI GY +
Sbjct: 164 ALVKMGLEE-DAFIENSLIHFYAESGELDYSRKVFDGMAERNIVSWTSLICGYAR 217



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/124 (33%), Positives = 69/124 (55%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W SLI GYA+   P+EA+ L+ +MV  G+ PN+ T   V  ACA+L +  L     
Sbjct: 204 NIVSWTSLICGYARRQFPKEAVSLFFEMVAAGIKPNSVTMVCVISACAKLKDLELSERVC 263

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRY 14
             I + G++  +  +  +LV+ Y   G+ D A++LFD C  ++   +N ++  YV+ G  
Sbjct: 264 AYIGESGVK-VNTLVVNALVDMYMKCGATDAAKRLFDECGDKNLVLYNTILSNYVRQGLA 322

Query: 13  IDAI 2
            +A+
Sbjct: 323 REAL 326



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/118 (32%), Positives = 64/118 (54%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           NL ++N+++  Y +  +  EA+ +  +M+ QG  P+  T      ACAQL +   G   H
Sbjct: 305 NLVLYNTILSNYVRQGLAREALAVLDEMLRQGPRPDKVTLLSAISACAQLGDSLSGKCCH 364

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
           G +I+  LE  DA I  ++++ Y   G  ++A  +FD    R   SWN+LI G+++ G
Sbjct: 365 GYVIRNRLEGWDA-ICNAMIDMYMKCGKQEMACGIFDNMSNRTVVSWNSLIAGFIRSG 421


>ref|XP_002521565.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539243|gb|EEF40836.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 338

 Score =  123 bits (309), Expect = 2e-26
 Identities = 63/134 (47%), Positives = 83/134 (61%)
 Frame = -2

Query: 421 NLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVF 242
           NL YA  +   L   PN ++WN+++RGYA S  PEEA++LYHQM+   +  N YTFPF+ 
Sbjct: 59  NLTYAKIVFDSLSSRPNTYIWNAMLRGYADSNKPEEALILYHQMLCHSVPHNGYTFPFLL 118

Query: 241 KACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDT 62
           KAC+ L         H  IIKLG    D +   SL++ YA+SG I+ AR +FDR    DT
Sbjct: 119 KACSSLSAIEKAQQVHAQIIKLGF-GSDVYTTNSLLHAYAASGFIESARIIFDRIPHPDT 177

Query: 61  TSWNALIKGYVKVG 20
            SWN++I GYVK G
Sbjct: 178 VSWNSIIDGYVKCG 191



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 31/164 (18%)
 Frame = -2

Query: 400 IVARLPHPPNLFMWNSLIRGY-------------------------------AQSTMPEE 314
           I  R+PHP  +  WNS+I GY                                Q+ + +E
Sbjct: 168 IFDRIPHPDTV-SWNSIIDGYVKCGETETAYELFKDMPEKNAISFTVMISGHVQAGLDKE 226

Query: 313 AILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLV 134
           A+ L+ +M   G+ P+      V  ACA L   + G   H T IK      D  +  +L 
Sbjct: 227 ALDLFQEMQIAGIKPDKIVLTNVLSACAHLGALDQGRWIH-TYIKKNDVQIDPMLGCALT 285

Query: 133 NFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRYIDAI 2
           + YA  GS+  A ++F +   +  + W ALI G+   GR  +A+
Sbjct: 286 DMYAKCGSMQDALEVFKKTRKKSVSLWTALIHGFAIHGRGREAL 329


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  122 bits (307), Expect = 4e-26
 Identities = 60/141 (42%), Positives = 91/141 (64%)
 Frame = -2

Query: 424 SNLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFV 245
           S+ NY   +  ++  P N+F+WN++IRG   +   ++AI  Y  M  +G LPNN+TFPFV
Sbjct: 60  SDTNYTRFLFHQIKQP-NIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFV 118

Query: 244 FKACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRD 65
            KACA+LL+  LG+  H  ++K G  DCD F++TSLV  YA  G ++ A ++FD    ++
Sbjct: 119 LKACARLLDLQLGVKIHTLVVKGGF-DCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKN 177

Query: 64  TTSWNALIKGYVKVGRYIDAI 2
             SW A+I GY+ VG++ +AI
Sbjct: 178 VVSWTAIISGYIGVGKFREAI 198



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 44/124 (35%), Positives = 71/124 (57%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W ++I GY       EAI ++ +++E  L P+++T   V  AC QL + N G   H
Sbjct: 177 NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIH 236

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRY 14
             I+++G+   + F+ TSLV+ YA  G+++ AR +FD    +D  SW A+I+GY   G  
Sbjct: 237 KCIMEMGMVR-NVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLP 295

Query: 13  IDAI 2
            +AI
Sbjct: 296 KEAI 299



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
 Frame = -2

Query: 421 NLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVF 242
           N+  A S+   +P   ++  W ++I+GYA + +P+EAI L+ QM  + + P+ YT   V 
Sbjct: 263 NMEKARSVFDGMPEK-DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVL 321

Query: 241 KACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQ-----TSLVNFYASSGSIDIARQLFDRC 77
            ACA+L    LG          GL D + F+      T+L++ YA  GS+  A ++F   
Sbjct: 322 SACARLGALELGEWVS------GLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGM 375

Query: 76  LVRDTTSWNALI-----KGYVKV 23
             +D   WNA+I      GYVK+
Sbjct: 376 KEKDRVVWNAIISGLAMNGYVKI 398


>ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590566803|ref|XP_007010337.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508727249|gb|EOY19146.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508727250|gb|EOY19147.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 688

 Score =  122 bits (305), Expect = 7e-26
 Identities = 60/138 (43%), Positives = 86/138 (62%)
 Frame = -2

Query: 415 NYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKA 236
           NYAC I  +   P N+++WN++I+G        EA   Y  M  QG LPN++TFPFV KA
Sbjct: 65  NYACLIFNQTKQP-NIYLWNTMIQGLVSGDCFLEAAQFYASMRSQGFLPNSFTFPFVLKA 123

Query: 235 CAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTS 56
            A+LL+  LG+  H  ++KLG  DCD F++T L+  YA  G +D A ++FD    ++  S
Sbjct: 124 YARLLDLQLGIRIHALVVKLGF-DCDIFVKTGLLCLYAKCGCLDRAIKVFDDIPEKNVVS 182

Query: 55  WNALIKGYVKVGRYIDAI 2
           W A+I GY+ VGRY +A+
Sbjct: 183 WTAMISGYIDVGRYREAV 200



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/118 (33%), Positives = 66/118 (55%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W ++I GY       EA+ ++ +++E GL P++++   V  ACA L + N G    
Sbjct: 179 NVVSWTAMISGYIDVGRYREAVNMFSKLLEMGLRPDSFSLVRVLAACAHLGDLNSGEWID 238

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
            +I + GL   D F+ TS+V+ YA  G+++ AR  FD    +D  +W+ +I+GY   G
Sbjct: 239 RSITQFGLSR-DVFVATSVVDMYAKCGNMEKARLAFDGIPEKDIVTWSTMIQGYASNG 295



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/118 (31%), Positives = 64/118 (54%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           ++  W+++I+GYA + +P+EA+ L+ QM ++ L P+ Y    V  ACA+L    LG  + 
Sbjct: 280 DIVTWSTMIQGYASNGLPKEALDLFFQMQKEKLAPDCYVMVGVLSACARLGALELG-DWA 338

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
             ++       +  + T+L++ +A  GSI  A ++F R   +D   WNA I G    G
Sbjct: 339 SKLMDRAEFLSNPVLGTALIDMFAKCGSIAQAFEIFKRMKEKDLVVWNAAISGLAMNG 396


>ref|XP_003538647.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 854

 Score =  121 bits (304), Expect = 9e-26
 Identities = 55/114 (48%), Positives = 82/114 (71%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           +LFM+N LIRGYA + + ++AILLY QM+  G++P+ YTFPF+  AC+++L  + G+  H
Sbjct: 112 SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVH 171

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGY 32
           G ++K+GLE  D F+  SL++FYA  G +D+ R+LFD  L R+  SW +LI GY
Sbjct: 172 GAVLKMGLEG-DIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGY 224



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 42/115 (36%), Positives = 62/115 (53%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W SLI GY+   + +EA+ L+ QM E G+ PN  T   V  ACA+L +  LG    
Sbjct: 213 NVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVC 272

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYV 29
             I +LG+E     +  +LV+ Y   G I  ARQ+FD C  ++   +N ++  YV
Sbjct: 273 SYISELGME-LSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYV 326



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/118 (27%), Positives = 63/118 (53%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           NL M+N+++  Y       + +++  +M+++G  P+  T      ACAQL + ++G   H
Sbjct: 314 NLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSH 373

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
             +++ GLE  D  I  ++++ Y   G  + A ++F+    +   +WN+LI G V+ G
Sbjct: 374 AYVLRNGLEGWDN-ISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDG 430


>ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534006|gb|EEF35728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score =  121 bits (304), Expect = 9e-26
 Identities = 58/125 (46%), Positives = 85/125 (68%)
 Frame = -2

Query: 376 PNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVF 197
           P++ ++N++IRG   S    E+I  Y+ M ++G LPNN+TFPFV KACA+LL+  LG++ 
Sbjct: 77  PDVVLYNTMIRGLVSSDCFTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMM 136

Query: 196 HGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGR 17
           H  ++KLG  DC+ F+ TSLV+ YA  GSID A ++ D     +  SW A+I GY+ VG+
Sbjct: 137 HTLVVKLGF-DCNLFVNTSLVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGK 195

Query: 16  YIDAI 2
           Y +AI
Sbjct: 196 YREAI 200



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 45/124 (36%), Positives = 68/124 (54%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W ++I GY       EAI L+ +M+E GL P+++T   V  AC Q+ +   G    
Sbjct: 179 NIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPDSFTIVQVLSACIQIGDLANGEWID 238

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRY 14
             I +  +   + F+ TSLV+ YA  G+++ AR LFD    RD  SW+A+I+GY   G  
Sbjct: 239 RYITE-NVMARNVFVTTSLVDLYAKHGNMEKARCLFDGMAERDIVSWSAMIQGYASNGLP 297

Query: 13  IDAI 2
            DA+
Sbjct: 298 KDAL 301



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/118 (28%), Positives = 63/118 (53%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           ++  W+++I+GYA + +P++A+ L+ +M+  GL P++Y       ACA+L    LG  + 
Sbjct: 280 DIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACARLGALELG-DWG 338

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
             ++       +  + T+L++ YA  GS+  A ++F     +D   WNA I G    G
Sbjct: 339 SNLMDRTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIKGKDRAVWNAAISGLAMNG 396


>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  120 bits (302), Expect = 1e-25
 Identities = 58/121 (47%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
 Frame = -2

Query: 376 PNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLL-PNNYTFPFVFKACAQLLEPNLGLV 200
           PNLFMWN++IRGY++S  P EAI+LY  M+ +G+  PNN+TFPF+  +CA+L     G  
Sbjct: 73  PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132

Query: 199 FHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
            H  IIK G E  D F++ +L++ Y+  G++++AR LFD  LVRD  S+N +IKGY +V 
Sbjct: 133 VHSHIIKHGFES-DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191

Query: 19  R 17
           +
Sbjct: 192 Q 192



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           +L  +N++I+GYA+   PE A+ L+ +M   G+LP+ +TF  +F  C+ L EPN+G   H
Sbjct: 176 DLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIH 235

Query: 193 GTIIK-LGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRC-LVRDTTSWNALIKGYVKVG 20
             + K L   D +  +++++V+ YA  G I+IA ++F      +   +W++++ GY + G
Sbjct: 236 AQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCG 295



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
 Frame = -2

Query: 382 HPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGL 203
           H  ++  W ++I GY+Q+    EA+ L+ +M   G+ P+  T   V  ACA+L   +LG 
Sbjct: 308 HERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGK 367

Query: 202 VFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTS--WNALIKGYV 29
             +   I+ G+ + +  +  ++++ YA  GSID A ++F R      T   +N++I G  
Sbjct: 368 RLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLA 427

Query: 28  KVG 20
           + G
Sbjct: 428 QHG 430


>ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/125 (44%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
 Frame = -2

Query: 382 HPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGL 203
           H PN+F WN + R Y++S+ P E I LY+ M+  G LP+NY+FPFV KACA+L   + G 
Sbjct: 88  HKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGR 147

Query: 202 VFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDR--CLVRDTTSWNALIKGYV 29
             H + +KLG+   D F+Q +L++ ++S G+++ AR +FD    LVRD  SWN++I GY+
Sbjct: 148 EIHSSTLKLGVH-LDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYL 206

Query: 28  KVGRY 14
           +  RY
Sbjct: 207 QSHRY 211



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361 WNSLIRGYAQSTMPEEAILLYHQMVEQGLL-PNNYTFPFVFKACAQLLEPNLGLVFHGTI 185
           WNS+I GY QS   E A+ ++ +++  G L P+  T       C +L   +LG   HG  
Sbjct: 198 WNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLF 257

Query: 184 IKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRYIDA 5
              G    D F+ +SL++ Y+  G I+ AR++FDR   R+T  W ++I GY +   + +A
Sbjct: 258 TGSGFV-LDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEA 316

Query: 4   I 2
           I
Sbjct: 317 I 317



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
 Frame = -2

Query: 409 ACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACA 230
           A  +  R+PH  N   W S+I GYAQS + +EAI L+ +M   G   +  T   V  AC 
Sbjct: 285 ARKVFDRIPHR-NTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACG 343

Query: 229 QLLEPNLGLVFHGTIIKLGLE----DCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDT 62
                + G +  G  I L  E    + D   + +L+  Y+  G I  A ++F      D 
Sbjct: 344 -----HWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDI 398

Query: 61  TSWNALIKGYVKVG 20
            SW+A+I G    G
Sbjct: 399 FSWSAVISGLAMNG 412


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508783730|gb|EOY30986.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 847

 Score =  120 bits (300), Expect = 3e-25
 Identities = 56/119 (47%), Positives = 80/119 (67%)
 Frame = -2

Query: 376 PNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVF 197
           PN  +WN++IRG++ S+ P   +  Y +M+  G++PN+YTFPFV K+CA+      G   
Sbjct: 151 PNQVIWNTMIRGFSLSSSPGLTLEFYVKMIWSGIVPNSYTFPFVLKSCAKTASTQEGKQI 210

Query: 196 HGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
           HG ++KLGLE  DAF+ TSL+N YA +G    AR +FD+  +RDT S+ ALI GYV +G
Sbjct: 211 HGQVLKLGLES-DAFVHTSLINMYAQNGEFGNARLVFDKSHLRDTVSYTALITGYVSIG 268



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/120 (34%), Positives = 63/120 (52%)
 Frame = -2

Query: 361 WNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFHGTII 182
           WN++I GYAQ+   EEA+  + +M+   ++PN  T   V  ACAQ     LG      I 
Sbjct: 288 WNAMIAGYAQTGQHEEALAFFEEMIGANVVPNESTLVSVLSACAQSGSLELGTWVRSWIN 347

Query: 181 KLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRYIDAI 2
           + GL   +  +  +L++ Y+  G +D A  LF+    RD  SWN +I GY  +  Y +A+
Sbjct: 348 EHGL-GSNIHLANALIDMYSKCGDLDTAFDLFEGLQQRDVISWNVMIGGYTHMSYYKEAL 406



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/118 (33%), Positives = 64/118 (54%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           ++  WN +I GY   +  +EA+ L+ +M+   + P++ TF  V  ACA L   +LG   H
Sbjct: 385 DVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVLPACANLGALDLGKWIH 444

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
             I K      +  + TSL++ YA  GSI+ A+Q+F+    ++  SWNA+I G    G
Sbjct: 445 AYIDKNFQNSTNISLWTSLIDMYAKCGSIEAAQQVFNGMEQKNLASWNAMISGLAMHG 502


>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
           gi|241930650|gb|EES03795.1| hypothetical protein
           SORBIDRAFT_03g037910 [Sorghum bicolor]
          Length = 894

 Score =  119 bits (298), Expect = 4e-25
 Identities = 59/141 (41%), Positives = 88/141 (62%)
 Frame = -2

Query: 424 SNLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFV 245
           S+L +A  +  ++   P  F+WN+L+RG AQS  P++AI+ Y +  E+G+ P+N TFPFV
Sbjct: 358 SDLVFAHKVFEQI-ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFV 416

Query: 244 FKACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRD 65
            KACA+   P  G   H  +IKLG    D F+  SL++ YA+ G +  AR +FD  LV+D
Sbjct: 417 LKACAKTYAPKEGEQMHSHVIKLGFL-LDIFVSNSLIHLYAACGDLVCARSIFDEMLVKD 475

Query: 64  TTSWNALIKGYVKVGRYIDAI 2
             SWN+LI GY +  R+ + +
Sbjct: 476 VVSWNSLIGGYSQRNRFKEVL 496



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W  LI GY ++ +  EA+ L+  M+  G+ P+  T   V  A + L    +G + H
Sbjct: 36  NVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAISNLGGILMGEMLH 95

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCL-VRDTTSWNALIKGYVKVGR 17
           G  +K G+   DA +  SL++ YA  GS+  + ++FD  L  R+  SW ++I G+   G 
Sbjct: 96  GYCVKKGIMS-DARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGL 154

Query: 16  YIDAI 2
            ++A+
Sbjct: 155 SVEAL 159



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/134 (29%), Positives = 69/134 (51%)
 Frame = -2

Query: 421 NLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVF 242
           NL  A  I  ++P+  +L  W+S+I  Y+Q++   +++ L+ QM    + P+      V 
Sbjct: 592 NLVSAKKIFDQIPNK-DLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVL 650

Query: 241 KACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDT 62
            ACA L   +LG   H  + +  ++  D  ++ SL++ +A  G +  A Q+F     +DT
Sbjct: 651 SACAHLGALDLGKWIHDYVRRNNIKT-DTIMENSLIDMFAKCGCMQEALQVFTEMEEKDT 709

Query: 61  TSWNALIKGYVKVG 20
            SWN++I G    G
Sbjct: 710 LSWNSIILGLANNG 723



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/119 (26%), Positives = 59/119 (49%)
 Frame = -2

Query: 361 WNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFHGTII 182
           WNSLI GY+Q    +E + L+  M  + +  +  T   V  AC  L + ++       I 
Sbjct: 479 WNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIE 538

Query: 181 KLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRYIDA 5
           +  +E  D ++  +L+++Y   G +  A ++F +   ++T + NA+I  Y K G  + A
Sbjct: 539 RNHIE-VDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSA 596


>ref|XP_007157109.1| hypothetical protein PHAVU_002G043500g [Phaseolus vulgaris]
           gi|561030524|gb|ESW29103.1| hypothetical protein
           PHAVU_002G043500g [Phaseolus vulgaris]
          Length = 838

 Score =  118 bits (296), Expect = 7e-25
 Identities = 53/115 (46%), Positives = 81/115 (70%)
 Frame = -2

Query: 376 PNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVF 197
           P++++ N LIRGYA + + E+AILLY QMV  G++P+NYTFPF+  AC++    + G+  
Sbjct: 95  PSVYVCNCLIRGYASAGLCEKAILLYIQMVGMGIVPDNYTFPFLLSACSKTTALSEGVQV 154

Query: 196 HGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGY 32
           HG ++K+GL D D F+  S ++FYA  G +D+ R++FD+ L R+  SW +LI GY
Sbjct: 155 HGVVVKMGL-DGDIFVSNSFIHFYAECGKVDLGRKVFDKMLERNVVSWTSLINGY 208



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/124 (37%), Positives = 69/124 (55%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W SLI GYA   + +EA+ L+ QMVE G+ PN  T   V  ACA+L +  LG    
Sbjct: 197 NVVSWTSLINGYAGRDLAKEAVSLFFQMVEAGVEPNPVTMVCVISACAKLKDLELGKKVC 256

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRY 14
             I + G+E  +A +  +LV+ Y   G I  AR++FD C  ++  ++N ++  YV  GR 
Sbjct: 257 AYIGESGVE-LNALMVNALVDMYMKCGDICSARRIFDECTDKNLVTYNTIMSNYVYHGRA 315

Query: 13  IDAI 2
            D +
Sbjct: 316 GDVL 319



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 30/154 (19%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           NL  +N+++  Y       + +++  +M+++G  P+  T      ACAQL + ++G   H
Sbjct: 298 NLVTYNTIMSNYVYHGRAGDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSH 357

Query: 193 GTIIKLGLEDCDAFIQT------------------------------SLVNFYASSGSID 104
             +++ GLE  D  +                                SL+      G ++
Sbjct: 358 AYVLRNGLEGWDNILNAIIDMYMKCGERGAACKAFEHMPNKTVVTWNSLIAGLGRDGDVE 417

Query: 103 IARQLFDRCLVRDTTSWNALIKGYVKVGRYIDAI 2
           +A ++FD  L RD  SWN +I   V+   + +AI
Sbjct: 418 LALRIFDEMLERDLVSWNTMISALVQASMFEEAI 451


>ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
           gi|462399488|gb|EMJ05156.1| hypothetical protein
           PRUPE_ppa022872mg [Prunus persica]
          Length = 714

 Score =  118 bits (295), Expect = 1e-24
 Identities = 61/146 (41%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
 Frame = -2

Query: 421 NLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVF 242
           +L+YA  +   + +P N  +WN++IRG++ S+   +A+  Y  M+  G+ PN+YTFPF+ 
Sbjct: 82  DLSYALLVFQSIENP-NQIIWNTIIRGFSLSSKSIQAVEFYVLMLLSGVEPNSYTFPFLL 140

Query: 241 KACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASS------GSIDIARQLFDR 80
           K+CA+    + G   HG ++KLGL D DAF+ TSL+N YA +      G +D AR LFD 
Sbjct: 141 KSCAKFAASHEGKQIHGHVLKLGL-DSDAFVHTSLINMYAQNVLSEMWGCMDDARYLFDE 199

Query: 79  CLVRDTTSWNALIKGYVKVGRYIDAI 2
              RD  SWNA+I GY + GR+ +A+
Sbjct: 200 IPGRDVVSWNAMISGYAQSGRFEEAL 225



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 46/120 (38%), Positives = 63/120 (52%)
 Frame = -2

Query: 361 WNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFHGTII 182
           WN++I GYAQS   EEA+ L+ +M +  + PN  T   V  ACAQ     LG      I 
Sbjct: 208 WNAMISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACAQSGSLELGKWVGSWIE 267

Query: 181 KLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRYIDAI 2
             GL   +  +  +L++ YA  G++D AR LFD    RD  SWN +I GY     Y +A+
Sbjct: 268 NRGLGS-NLRLVNALIDMYAKCGALDTARSLFDGLQQRDVISWNVMIGGYTHKSHYKEAL 326



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           ++  WN +I GY   +  +EA+ L+  M+     PN+ TF  +  AC+ L   +LG   H
Sbjct: 305 DVISWNVMIGGYTHKSHYKEALALFRLMLRSNADPNDVTFLGILPACSHLGALDLGKWIH 364

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
             I K      +  + TSL++ YA  G+I+ A+Q+F+    +   SWNA+I G    G
Sbjct: 365 AYIDKNFQSLTNTSLWTSLIDMYAKCGNIEAAKQVFNGMEAKSLASWNAMISGLAMHG 422


>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222855145|gb|EEE92692.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 619

 Score =  117 bits (294), Expect = 1e-24
 Identities = 58/140 (41%), Positives = 91/140 (65%)
 Frame = -2

Query: 421 NLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVF 242
           N NY+  I  +   P N+F++N++I G   +   +E+I +YH M ++GL P+++TFPF+ 
Sbjct: 57  NTNYSHRIFHQTKEP-NIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115

Query: 241 KACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDT 62
           KACA+LL+  LG+  HG ++K G E  DAF+ TSLV+ Y   G ID A ++FD    ++ 
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCES-DAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNV 174

Query: 61  TSWNALIKGYVKVGRYIDAI 2
            +W A+I GY+ VG+  +AI
Sbjct: 175 AAWTAIISGYIGVGKCREAI 194



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/130 (30%), Positives = 68/130 (52%)
 Frame = -2

Query: 409 ACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACA 230
           ACS+   +    ++  W+S+I+GYA + +P+EA+ L+ +M+ +G  P+ Y    V  ACA
Sbjct: 200 ACSVFDGMLEK-DIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258

Query: 229 QLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWN 50
           +L    LG  +   ++       +  + T+L++ YA  G +D A ++F     +D   WN
Sbjct: 259 RLGALELG-NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWN 317

Query: 49  ALIKGYVKVG 20
           A I G    G
Sbjct: 318 AAISGLAMSG 327


>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
           gi|568824869|ref|XP_006466814.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557527644|gb|ESR38894.1| hypothetical protein
           CICLE_v10025166mg [Citrus clementina]
          Length = 622

 Score =  117 bits (293), Expect = 2e-24
 Identities = 62/134 (46%), Positives = 82/134 (61%)
 Frame = -2

Query: 421 NLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVF 242
           +L YA  +  R+  P N FMWN+++RGYA S+ PE+A+LLY QM+   +  N YTFPF+ 
Sbjct: 67  SLAYAQMVFDRIIKP-NTFMWNTMVRGYADSSEPEQALLLYRQMLSHSVSHNAYTFPFLL 125

Query: 241 KACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDT 62
           KAC++L         H  IIK G    + F   SL++ YA SGSI  AR +FD    RDT
Sbjct: 126 KACSRLSALEETQQIHAQIIKFGFSS-EVFATNSLLHAYAISGSIKSARLIFDHMPQRDT 184

Query: 61  TSWNALIKGYVKVG 20
            SWN++I GY K G
Sbjct: 185 VSWNSMIDGYTKCG 198



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W +LI GY  + M +EA+ L+H+M   G+ P+N        ACA L   + G    
Sbjct: 214 NVISWTTLISGYVGAGMDKEALHLFHEMQTAGVKPDNVALVSAVSACAHLGALDQGRWID 273

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGRY 14
             I  LG++  D  +  +L++ YA  G ++ A +LF R   +  ++W A+I G    G  
Sbjct: 274 EYIKHLGIK-IDPILGCALIDMYAKCGDLEEALELFKRMEKKGVSAWTAIIFGLAIHGHG 332

Query: 13  IDAI 2
            +A+
Sbjct: 333 REAL 336


>ref|XP_006856097.1| hypothetical protein AMTR_s00059p00132030 [Amborella trichopoda]
           gi|548859956|gb|ERN17564.1| hypothetical protein
           AMTR_s00059p00132030 [Amborella trichopoda]
          Length = 236

 Score =  117 bits (293), Expect = 2e-24
 Identities = 61/138 (44%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
 Frame = -2

Query: 430 SPSNLN-YACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTF 254
           S SNL  YA S+   +P P NLF++N++IRG  ++  P EAILLY+QM E+ +LPNN+++
Sbjct: 70  STSNLLFYAFSLFILIPEP-NLFVYNTMIRGSVRNDRPCEAILLYNQMRERNILPNNFSY 128

Query: 253 PFVFKACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCL 74
           PF+F AC + L  N GL  HG +++ G    D F+ T+L+  YA  G +  +  +FD   
Sbjct: 129 PFLFNACEKTLAINHGLKLHGGVLRSGF-CSDPFVMTTLLTMYAKFGMLQSSAHVFDEMA 187

Query: 73  VRDTTSWNALIKGYVKVG 20
           +RDT SWN+LI  Y+  G
Sbjct: 188 MRDTVSWNSLIGAYINHG 205


>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550321449|gb|EEF05406.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 682

 Score =  117 bits (292), Expect = 2e-24
 Identities = 59/140 (42%), Positives = 91/140 (65%)
 Frame = -2

Query: 421 NLNYACSIVARLPHPPNLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVF 242
           N NY+  I+ +   P N+F++N++IRG   +   +E+I +YH M ++GL P+++TFPFV 
Sbjct: 57  NTNYSFRILDQTKEP-NIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115

Query: 241 KACAQLLEPNLGLVFHGTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDT 62
           KACA++L+  LG+  H  ++K G E  DAF++ SL+N Y   G ID A ++FD    ++ 
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCE-ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNF 174

Query: 61  TSWNALIKGYVKVGRYIDAI 2
            SW A I GYV VG+  +AI
Sbjct: 175 ASWTATISGYVGVGKCREAI 194



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N+  W+S+I+GYA + +P+EA+ L+ +M+ +GL P+ Y    V  +CA+L    LG  + 
Sbjct: 274 NIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG-DWA 332

Query: 193 GTIIKLGLEDCD-AFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVGR 17
             +I  G E  D + + T+L++ YA  G +D A ++F     +D   WNA I G    G 
Sbjct: 333 SNLIN-GNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGH 391

Query: 16  YIDAI 2
             DA+
Sbjct: 392 VKDAL 396



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/118 (30%), Positives = 64/118 (54%)
 Frame = -2

Query: 373 NLFMWNSLIRGYAQSTMPEEAILLYHQMVEQGLLPNNYTFPFVFKACAQLLEPNLGLVFH 194
           N   W + I GY       EAI ++ +++E GL P++++   V  AC +  +   G    
Sbjct: 173 NFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWID 232

Query: 193 GTIIKLGLEDCDAFIQTSLVNFYASSGSIDIARQLFDRCLVRDTTSWNALIKGYVKVG 20
             I + G+   + F+ T+LV+FY   G+++ AR +FD  L ++  SW+++I+GY   G
Sbjct: 233 EYITENGMAR-NVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNG 289