BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00012628
         (824 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007011321.1| Pseudouridine synthase family protein isofor...   314   3e-83
ref|XP_007011320.1| Pseudouridine synthase isoform 1 [Theobroma ...   314   3e-83
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              314   3e-83
ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   310   4e-82
ref|XP_007143600.1| hypothetical protein PHAVU_007G085300g [Phas...   309   9e-82
ref|XP_006589475.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   308   2e-81
ref|XP_006589474.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   308   2e-81
ref|XP_006589472.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   308   2e-81
ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   308   2e-81
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   308   2e-81
ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   306   8e-81
ref|XP_006434555.1| hypothetical protein CICLE_v10001190mg [Citr...   305   2e-80
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   305   2e-80
ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   304   2e-80
ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   303   7e-80
ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   301   3e-79
ref|XP_006606192.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   300   3e-79
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   300   3e-79
gb|EXB37798.1| tRNA pseudouridine(38/39) synthase [Morus notabilis]   299   7e-79
ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   298   1e-78

>ref|XP_007011321.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
           gi|508728234|gb|EOY20131.1| Pseudouridine synthase
           family protein isoform 2 [Theobroma cacao]
          Length = 478

 Score =  314 bits (804), Expect = 3e-83
 Identities = 161/251 (64%), Positives = 194/251 (77%), Gaps = 6/251 (2%)
 Frame = -2

Query: 736 ADERCNN---AEQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFY 566
           +D +C N   A QR+ +G   + R+    E  PG   + + H SKR+VALK+MYFG+RFY
Sbjct: 56  SDVKCFNSSVASQRKNNGD-DKTRKKKASERIPGYNLEIMTHHSKRYVALKVMYFGKRFY 114

Query: 565 GFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKL 386
           GFASEAQMDPTVESEIFKAL+KT LLV DKKES+YSRCGRTDKGVS++GQVI+L+LRS L
Sbjct: 115 GFASEAQMDPTVESEIFKALEKTRLLVGDKKESLYSRCGRTDKGVSAVGQVIALYLRSNL 174

Query: 385 KDREMHANDYKE---ISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSR 215
           K+ +  AND      IS   T  EIDYVRVLNRVLPNDIR++ WSP  IDF+ARFSCL+R
Sbjct: 175 KEAD--ANDQTSGELISGTRTEGEIDYVRVLNRVLPNDIRILGWSPVSIDFNARFSCLAR 232

Query: 214 EYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCE 35
           EY Y FW+G+L+   ME AGKKF+G+HDFRNFCKMDAANVHNYRR ++ FEISS N R E
Sbjct: 233 EYTYFFWRGNLNFPDMENAGKKFIGEHDFRNFCKMDAANVHNYRRRVTLFEISSSNMRFE 292

Query: 34  GDQLWAMTIKG 2
           G+QL  + +KG
Sbjct: 293 GNQLCVIKVKG 303


>ref|XP_007011320.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
           gi|508728233|gb|EOY20130.1| Pseudouridine synthase
           isoform 1 [Theobroma cacao]
          Length = 445

 Score =  314 bits (804), Expect = 3e-83
 Identities = 161/251 (64%), Positives = 194/251 (77%), Gaps = 6/251 (2%)
 Frame = -2

Query: 736 ADERCNN---AEQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFY 566
           +D +C N   A QR+ +G   + R+    E  PG   + + H SKR+VALK+MYFG+RFY
Sbjct: 56  SDVKCFNSSVASQRKNNGD-DKTRKKKASERIPGYNLEIMTHHSKRYVALKVMYFGKRFY 114

Query: 565 GFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKL 386
           GFASEAQMDPTVESEIFKAL+KT LLV DKKES+YSRCGRTDKGVS++GQVI+L+LRS L
Sbjct: 115 GFASEAQMDPTVESEIFKALEKTRLLVGDKKESLYSRCGRTDKGVSAVGQVIALYLRSNL 174

Query: 385 KDREMHANDYKE---ISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSR 215
           K+ +  AND      IS   T  EIDYVRVLNRVLPNDIR++ WSP  IDF+ARFSCL+R
Sbjct: 175 KEAD--ANDQTSGELISGTRTEGEIDYVRVLNRVLPNDIRILGWSPVSIDFNARFSCLAR 232

Query: 214 EYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCE 35
           EY Y FW+G+L+   ME AGKKF+G+HDFRNFCKMDAANVHNYRR ++ FEISS N R E
Sbjct: 233 EYTYFFWRGNLNFPDMENAGKKFIGEHDFRNFCKMDAANVHNYRRRVTLFEISSSNMRFE 292

Query: 34  GDQLWAMTIKG 2
           G+QL  + +KG
Sbjct: 293 GNQLCVIKVKG 303


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  314 bits (804), Expect = 3e-83
 Identities = 155/234 (66%), Positives = 177/234 (75%), Gaps = 18/234 (7%)
 Frame = -2

Query: 649 PGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKE 470
           PG   + + H SKR+VALK+MYFG RFYGFASEA MDPTVESEIFKAL+KT L V DKKE
Sbjct: 88  PGTNMRTMNHISKRYVALKVMYFGPRFYGFASEAHMDPTVESEIFKALEKTWLAVGDKKE 147

Query: 469 SMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLEE----------- 323
             YSRCGRTDKGVSS+GQVI+LFLRS LK+      + KE+ P++  EE           
Sbjct: 148 LQYSRCGRTDKGVSSVGQVIALFLRSNLKEIGAREENSKEVVPEEQYEERREVKDEGGGD 207

Query: 322 -------IDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDISAME 164
                  IDY+RVLNRVLP DIRV+ W P PI FHARFSCLSREYKY FW+G+L+I AME
Sbjct: 208 SLASEGEIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAME 267

Query: 163 RAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
            AGKKFVG+HDFRNFCKMDA NVHNYRRHI SFEI+  N R +G+QLWA+ IKG
Sbjct: 268 SAGKKFVGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAIKIKG 321


>ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X5
           [Glycine max]
          Length = 406

 Score =  310 bits (794), Expect = 4e-82
 Identities = 152/259 (58%), Positives = 188/259 (72%)
 Frame = -2

Query: 778 SDGDNVDLVSTKGSADERCNNAEQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVA 599
           SD + +  +  +   +++    ++R G    G  +     E  PG   + + H S+R+VA
Sbjct: 6   SDAELITSLQARVKMEKKVYVPDERGGKSKKGNRKSEEKIEKMPGYNTRFMSHHSRRYVA 65

Query: 598 LKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIG 419
           LK+MYFG+RFYGFASEAQM+PTVESE+FKA +KT LLV +KKES YSRCGRTDKGVSS+G
Sbjct: 66  LKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVG 125

Query: 418 QVISLFLRSKLKDREMHANDYKEISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFH 239
           QVI+LFLRS LK  E +  +   +  +    EIDYVRVLNRVLPNDIR++ W PAP+DFH
Sbjct: 126 QVIALFLRSNLKISETNNGNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFH 185

Query: 238 ARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEI 59
           ARFSCLSREYKY FWK +L+I AME AG K VG+HDFRNFCKMDAANVHNYRR I  FEI
Sbjct: 186 ARFSCLSREYKYFFWKENLNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEI 245

Query: 58  SSCNERCEGDQLWAMTIKG 2
           S  + R   +QLW + I+G
Sbjct: 246 SPTDVRYNDNQLWVIKIRG 264


>ref|XP_007143600.1| hypothetical protein PHAVU_007G085300g [Phaseolus vulgaris]
           gi|561016790|gb|ESW15594.1| hypothetical protein
           PHAVU_007G085300g [Phaseolus vulgaris]
          Length = 427

 Score =  309 bits (791), Expect = 9e-82
 Identities = 154/237 (64%), Positives = 180/237 (75%)
 Frame = -2

Query: 712 EQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPT 533
           E +EG+  F +  E    E  PG +   + H SKR+VALK+MYFG+RFYGFASEAQM PT
Sbjct: 53  ESKEGNMKFEKKIE----EKKPGYDTSFMSHRSKRYVALKVMYFGKRFYGFASEAQMQPT 108

Query: 532 VESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYK 353
           VE E+FKA +KT LLV DKKES YSRCGRTDKGVSS+GQVI+LFLRS LK   ++     
Sbjct: 109 VEFELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKLSAINNGSSG 168

Query: 352 EISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDIS 173
           E+  +    EIDYVRVLNRVLP+DIR++ W PAP+DFHARFSCLSREYKY FWK  L+I 
Sbjct: 169 EVLDEKHEGEIDYVRVLNRVLPHDIRILGWCPAPVDFHARFSCLSREYKYFFWKEKLNIP 228

Query: 172 AMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           AME AG K +G HDFRNFCKMDAANVHNYRRHI+ FEIS  + R  G+QLW + IKG
Sbjct: 229 AMESAGNKLIGTHDFRNFCKMDAANVHNYRRHITLFEISPTDVRYNGNQLWVIKIKG 285


>ref|XP_006589475.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X7
           [Glycine max]
          Length = 320

 Score =  308 bits (788), Expect = 2e-81
 Identities = 150/237 (63%), Positives = 179/237 (75%)
 Frame = -2

Query: 712 EQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPT 533
           ++R G    G  +     E  PG   + + H S+R+VALK+MYFG+RFYGFASEAQM+PT
Sbjct: 48  DERGGKSKKGNRKSEEKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQMEPT 107

Query: 532 VESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYK 353
           VESE+FKA +KT LLV +KKES YSRCGRTDKGVSS+GQVI+LFLRS LK  E +  +  
Sbjct: 108 VESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNNGNSG 167

Query: 352 EISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDIS 173
            +  +    EIDYVRVLNRVLPNDIR++ W PAP+DFHARFSCLSREYKY FWK +L+I 
Sbjct: 168 VVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQ 227

Query: 172 AMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           AME AG K VG+HDFRNFCKMDAANVHNYRR I  FEIS  + R   +QLW + I+G
Sbjct: 228 AMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRG 284


>ref|XP_006589474.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X6
           [Glycine max]
          Length = 366

 Score =  308 bits (788), Expect = 2e-81
 Identities = 150/237 (63%), Positives = 179/237 (75%)
 Frame = -2

Query: 712 EQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPT 533
           ++R G    G  +     E  PG   + + H S+R+VALK+MYFG+RFYGFASEAQM+PT
Sbjct: 48  DERGGKSKKGNRKSEEKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQMEPT 107

Query: 532 VESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYK 353
           VESE+FKA +KT LLV +KKES YSRCGRTDKGVSS+GQVI+LFLRS LK  E +  +  
Sbjct: 108 VESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNNGNSG 167

Query: 352 EISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDIS 173
            +  +    EIDYVRVLNRVLPNDIR++ W PAP+DFHARFSCLSREYKY FWK +L+I 
Sbjct: 168 VVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQ 227

Query: 172 AMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           AME AG K VG+HDFRNFCKMDAANVHNYRR I  FEIS  + R   +QLW + I+G
Sbjct: 228 AMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRG 284


>ref|XP_006589472.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X4
           [Glycine max]
          Length = 415

 Score =  308 bits (788), Expect = 2e-81
 Identities = 150/237 (63%), Positives = 179/237 (75%)
 Frame = -2

Query: 712 EQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPT 533
           ++R G    G  +     E  PG   + + H S+R+VALK+MYFG+RFYGFASEAQM+PT
Sbjct: 48  DERGGKSKKGNRKSEEKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQMEPT 107

Query: 532 VESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYK 353
           VESE+FKA +KT LLV +KKES YSRCGRTDKGVSS+GQVI+LFLRS LK  E +  +  
Sbjct: 108 VESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNNGNSG 167

Query: 352 EISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDIS 173
            +  +    EIDYVRVLNRVLPNDIR++ W PAP+DFHARFSCLSREYKY FWK +L+I 
Sbjct: 168 VVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQ 227

Query: 172 AMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           AME AG K VG+HDFRNFCKMDAANVHNYRR I  FEIS  + R   +QLW + I+G
Sbjct: 228 AMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRG 284


>ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X3
           [Glycine max]
          Length = 420

 Score =  308 bits (788), Expect = 2e-81
 Identities = 150/237 (63%), Positives = 179/237 (75%)
 Frame = -2

Query: 712 EQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPT 533
           ++R G    G  +     E  PG   + + H S+R+VALK+MYFG+RFYGFASEAQM+PT
Sbjct: 48  DERGGKSKKGNRKSEEKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQMEPT 107

Query: 532 VESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYK 353
           VESE+FKA +KT LLV +KKES YSRCGRTDKGVSS+GQVI+LFLRS LK  E +  +  
Sbjct: 108 VESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNNGNSG 167

Query: 352 EISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDIS 173
            +  +    EIDYVRVLNRVLPNDIR++ W PAP+DFHARFSCLSREYKY FWK +L+I 
Sbjct: 168 VVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQ 227

Query: 172 AMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           AME AG K VG+HDFRNFCKMDAANVHNYRR I  FEIS  + R   +QLW + I+G
Sbjct: 228 AMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRG 284


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
           [Glycine max]
          Length = 426

 Score =  308 bits (788), Expect = 2e-81
 Identities = 150/237 (63%), Positives = 179/237 (75%)
 Frame = -2

Query: 712 EQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPT 533
           ++R G    G  +     E  PG   + + H S+R+VALK+MYFG+RFYGFASEAQM+PT
Sbjct: 48  DERGGKSKKGNRKSEEKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQMEPT 107

Query: 532 VESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYK 353
           VESE+FKA +KT LLV +KKES YSRCGRTDKGVSS+GQVI+LFLRS LK  E +  +  
Sbjct: 108 VESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNNGNSG 167

Query: 352 EISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDIS 173
            +  +    EIDYVRVLNRVLPNDIR++ W PAP+DFHARFSCLSREYKY FWK +L+I 
Sbjct: 168 VVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQ 227

Query: 172 AMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           AME AG K VG+HDFRNFCKMDAANVHNYRR I  FEIS  + R   +QLW + I+G
Sbjct: 228 AMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRG 284


>ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
           [Glycine max]
          Length = 425

 Score =  306 bits (783), Expect = 8e-81
 Identities = 151/237 (63%), Positives = 179/237 (75%)
 Frame = -2

Query: 712 EQREGSGCFGEVREASPCETSPGRERKNIKHSSKRHVALKIMYFGQRFYGFASEAQMDPT 533
           ++R G    G  +     E  PG   + + H S+R+VALK+MYFG+RFYGFASEAQM+PT
Sbjct: 48  DERGGKSKKGNRKSEEKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQMEPT 107

Query: 532 VESEIFKALKKTMLLVSDKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYK 353
           VESE+FKA +KT LLV +KKES YSRCGRTDKGVSS+GQVI+LFLRS LK  E + N   
Sbjct: 108 VESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETN-NGNS 166

Query: 352 EISPKDTLEEIDYVRVLNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDIS 173
            +   +   EIDYVRVLNRVLPNDIR++ W PAP+DFHARFSCLSREYKY FWK +L+I 
Sbjct: 167 GVVLDEQHGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQ 226

Query: 172 AMERAGKKFVGQHDFRNFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           AME AG K VG+HDFRNFCKMDAANVHNYRR I  FEIS  + R   +QLW + I+G
Sbjct: 227 AMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRG 283


>ref|XP_006434555.1| hypothetical protein CICLE_v10001190mg [Citrus clementina]
           gi|557536677|gb|ESR47795.1| hypothetical protein
           CICLE_v10001190mg [Citrus clementina]
          Length = 437

 Score =  305 bits (780), Expect = 2e-80
 Identities = 158/281 (56%), Positives = 203/281 (72%), Gaps = 13/281 (4%)
 Frame = -2

Query: 805 EVVEDKKLSSDGDNVDLVSTKGSADERCNNAEQR------EGSGCFGEVR--EASPCETS 650
           E ++++    + DN  L+S       RC   E +      +G+    E R  E+  C+T 
Sbjct: 17  EALQNRVKELEADNAKLLSKLSLC--RCEKIEDKVHDGVEDGTTLVEENRKTESGGCKTG 74

Query: 649 PGRERKN----IKHSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVS 482
             + ++     + H  KR+VALK+MYFGQRFYGFAS+  M+PTVESEIFKAL+KT LLV+
Sbjct: 75  KKKVKEKMSGTLNHHFKRYVALKVMYFGQRFYGFASDGNMEPTVESEIFKALEKTRLLVA 134

Query: 481 DKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLE-EIDYVRV 305
           DKKES YSRCGRTDKGVSS+GQVI+++LRS +K+   +     E   ++ +E EIDYVRV
Sbjct: 135 DKKESHYSRCGRTDKGVSSVGQVIAIYLRSNIKECNTNNASMGETVQEEQIEDEIDYVRV 194

Query: 304 LNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFR 125
           LNRVLP DIRV+ WSPAP DF ARFSC+SR+YKY FW+ +L++SAME AGKKFVG+HDFR
Sbjct: 195 LNRVLPKDIRVMGWSPAPTDFSARFSCISRKYKYFFWRENLNLSAMESAGKKFVGEHDFR 254

Query: 124 NFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           NFCKMDAANVHNY+RH++SFEIS C    EG+QL A+ I+G
Sbjct: 255 NFCKMDAANVHNYKRHVTSFEISPCYISFEGNQLCAIKIRG 295


>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 438

 Score =  305 bits (780), Expect = 2e-80
 Identities = 159/271 (58%), Positives = 198/271 (73%), Gaps = 5/271 (1%)
 Frame = -2

Query: 799 VEDKKLSSDGDNVDLVSTKGSADERCNNAEQR----EGSGCFGEVREASPCETSPGRERK 632
           ++ K    + +N  L ST  +   RCN AE++     G      +++ +  E + G    
Sbjct: 38  LKSKVKELEAENAKLSSTLANC--RCNQAEEKLNVSTGEHNIKNIKKKT-IEKNSGHATT 94

Query: 631 NIKHSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRC 452
            + H  KR+VALK+MYFGQRFYGF+SE QMDPTVESEIFKAL++T LL+ DKKE  YSRC
Sbjct: 95  IMNHHLKRYVALKVMYFGQRFYGFSSEGQMDPTVESEIFKALERTRLLIGDKKEIQYSRC 154

Query: 451 GRTDKGVSSIGQVISLFLRSKLKDREMHANDYKEI-SPKDTLEEIDYVRVLNRVLPNDIR 275
           GRTDKGVS++GQVI+L LRSK+KD +     + E  S K +  EIDYVRVLNRVLPNDIR
Sbjct: 155 GRTDKGVSAVGQVIALLLRSKVKDIDEIGKVFGETASQKHSEGEIDYVRVLNRVLPNDIR 214

Query: 274 VISWSPAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANV 95
           +I W P P DF ARFSCLSREYKY F   +L++ AME AGKKF+G+HDFRNFCKMDA NV
Sbjct: 215 IIGWCPVPNDFSARFSCLSREYKYFFRGDNLNLLAMESAGKKFIGEHDFRNFCKMDAMNV 274

Query: 94  HNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           HNYRR+I+SFEIS C+ER EG+QL+A+ I+G
Sbjct: 275 HNYRRNITSFEISPCHERYEGNQLFAIKIRG 305


>ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Citrus
           sinensis]
          Length = 437

 Score =  304 bits (779), Expect = 2e-80
 Identities = 159/281 (56%), Positives = 202/281 (71%), Gaps = 13/281 (4%)
 Frame = -2

Query: 805 EVVEDKKLSSDGDNVDLVSTKGSADERCNNAEQR------EGSGCFGEVR--EASPCETS 650
           E ++++    + DN  L+S       RC   E +      +G+    E R  E+  C+T 
Sbjct: 17  EALQNRVKELEADNAKLLSKLSLC--RCEKIEDKVHDGVEDGTTLVEENRKTESGGCKTG 74

Query: 649 PGRERKN----IKHSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVS 482
             + ++     + H  KR+VALK+MYFGQRFYGFAS+  M+PTVESEIFKAL+KT LLV+
Sbjct: 75  KKKVKEKMSGTLNHHFKRYVALKVMYFGQRFYGFASDGNMEPTVESEIFKALEKTRLLVA 134

Query: 481 DKKESMYSRCGRTDKGVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLE-EIDYVRV 305
           DKKES YSRCGRTDKGVSS+GQVI+++LRS +K+   +     E   ++ +E EIDYVRV
Sbjct: 135 DKKESHYSRCGRTDKGVSSVGQVIAIYLRSNIKECNTNNASMGETVQEEQIEDEIDYVRV 194

Query: 304 LNRVLPNDIRVISWSPAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFR 125
           LNRVLP DIRVI WSPAP DF ARFSC+SREYKY FW+ +L++SAME AGKKFVG+HDFR
Sbjct: 195 LNRVLPKDIRVIGWSPAPTDFSARFSCISREYKYFFWRENLNLSAMESAGKKFVGEHDFR 254

Query: 124 NFCKMDAANVHNYRRHISSFEISSCNERCEGDQLWAMTIKG 2
           NFCKMDAANVHNY+R ++SFEIS C    EG+QL A+ I+G
Sbjct: 255 NFCKMDAANVHNYKRRVTSFEISPCYISFEGNQLCAIKIRG 295


>ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
           [Cicer arietinum]
          Length = 427

 Score =  303 bits (775), Expect = 7e-80
 Identities = 156/265 (58%), Positives = 196/265 (73%), Gaps = 7/265 (2%)
 Frame = -2

Query: 775 DGDNVDLVSTKGSADERCNNAEQR--EGSGCFGEVREASP-----CETSPGRERKNIKHS 617
           + +N +L+S    AD  C+  E++     G   E ++A+       E  PG   + + + 
Sbjct: 23  EAENANLLSRL--ADCHCSKIEKKLYGHDGKATEPKKANKKSKEKIEKKPGYNTRFMSNH 80

Query: 616 SKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRTDK 437
           SKR+VALK+MYFG+RFYGFASEAQM PTVESEIF+AL++  LLV DKKES YSRCGRTDK
Sbjct: 81  SKRYVALKVMYFGKRFYGFASEAQMQPTVESEIFQALEEARLLVGDKKESQYSRCGRTDK 140

Query: 436 GVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLEEIDYVRVLNRVLPNDIRVISWSP 257
           GVSS+GQVI+LFLRS+LK   ++     +I  ++   EIDYVRVLNRVLPNDIR++ W P
Sbjct: 141 GVSSVGQVIALFLRSRLKISGVNNGSSGDIVLEEQHGEIDYVRVLNRVLPNDIRILGWCP 200

Query: 256 APIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYRRH 77
            P+DFHARFSCLSREYKY FWK +L+I AME AG KF+G+HDFRNFCKMDAANVHNY R 
Sbjct: 201 VPVDFHARFSCLSREYKYFFWKENLNILAMESAGTKFLGEHDFRNFCKMDAANVHNYMRR 260

Query: 76  ISSFEISSCNERCEGDQLWAMTIKG 2
           I+ F+IS  +   +G+QLWA+ IKG
Sbjct: 261 ITMFKISPTDVSYDGNQLWAIKIKG 285


>ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
           [Cicer arietinum]
          Length = 428

 Score =  301 bits (770), Expect = 3e-79
 Identities = 157/266 (59%), Positives = 197/266 (74%), Gaps = 8/266 (3%)
 Frame = -2

Query: 775 DGDNVDLVSTKGSADERCNNAEQR--EGSGCFGEVREASP-----CETSPGRERKNIKHS 617
           + +N +L+S    AD  C+  E++     G   E ++A+       E  PG   + + + 
Sbjct: 23  EAENANLLSRL--ADCHCSKIEKKLYGHDGKATEPKKANKKSKEKIEKKPGYNTRFMSNH 80

Query: 616 SKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRTDK 437
           SKR+VALK+MYFG+RFYGFASEAQM PTVESEIF+AL++  LLV DKKES YSRCGRTDK
Sbjct: 81  SKRYVALKVMYFGKRFYGFASEAQMQPTVESEIFQALEEARLLVGDKKESQYSRCGRTDK 140

Query: 436 GVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLE-EIDYVRVLNRVLPNDIRVISWS 260
           GVSS+GQVI+LFLRS+LK   ++     +I  ++  E EIDYVRVLNRVLPNDIR++ W 
Sbjct: 141 GVSSVGQVIALFLRSRLKISGVNNGSSGDIVLEEQHEGEIDYVRVLNRVLPNDIRILGWC 200

Query: 259 PAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYRR 80
           P P+DFHARFSCLSREYKY FWK +L+I AME AG KF+G+HDFRNFCKMDAANVHNY R
Sbjct: 201 PVPVDFHARFSCLSREYKYFFWKENLNILAMESAGTKFLGEHDFRNFCKMDAANVHNYMR 260

Query: 79  HISSFEISSCNERCEGDQLWAMTIKG 2
            I+ F+IS  +   +G+QLWA+ IKG
Sbjct: 261 RITMFKISPTDVSYDGNQLWAIKIKG 286


>ref|XP_006606192.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X3
           [Glycine max]
          Length = 320

 Score =  300 bits (769), Expect = 3e-79
 Identities = 157/267 (58%), Positives = 189/267 (70%), Gaps = 9/267 (3%)
 Frame = -2

Query: 775 DGDNVDLVSTKGSADERCNNAEQ---------REGSGCFGEVREASPCETSPGRERKNIK 623
           + +N  L+S    AD RC+  E+         RE     G  +     E  PG   + + 
Sbjct: 22  EAENAKLLSQL--ADCRCHEMEKKLHIPDEKGRESKK--GNRKSEEKIEKMPGYNTRFMS 77

Query: 622 HSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRT 443
           H SKR+VALK+ YFG+RFYGFASEAQM+PTVESE+FKA +KT LLV DKKES YSRCGRT
Sbjct: 78  HHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRT 137

Query: 442 DKGVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLEEIDYVRVLNRVLPNDIRVISW 263
           DKGVSS+GQVI+LFLRS LK    +  +   +  +    EIDYV VLNRVLPNDIR++ W
Sbjct: 138 DKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGW 197

Query: 262 SPAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYR 83
            PAP+DFHARFSCLSREYKY FWK +L+I A+E AG K VG+HDFRNFCKMDAANVHNYR
Sbjct: 198 CPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYR 257

Query: 82  RHISSFEISSCNERCEGDQLWAMTIKG 2
           R I+ FEISS + R   +QLW + I+G
Sbjct: 258 RCITLFEISSTDVRYNDNQLWVIKIRG 284


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
           [Glycine max]
          Length = 426

 Score =  300 bits (769), Expect = 3e-79
 Identities = 157/267 (58%), Positives = 189/267 (70%), Gaps = 9/267 (3%)
 Frame = -2

Query: 775 DGDNVDLVSTKGSADERCNNAEQ---------REGSGCFGEVREASPCETSPGRERKNIK 623
           + +N  L+S    AD RC+  E+         RE     G  +     E  PG   + + 
Sbjct: 22  EAENAKLLSQL--ADCRCHEMEKKLHIPDEKGRESKK--GNRKSEEKIEKMPGYNTRFMS 77

Query: 622 HSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRT 443
           H SKR+VALK+ YFG+RFYGFASEAQM+PTVESE+FKA +KT LLV DKKES YSRCGRT
Sbjct: 78  HHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRT 137

Query: 442 DKGVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLEEIDYVRVLNRVLPNDIRVISW 263
           DKGVSS+GQVI+LFLRS LK    +  +   +  +    EIDYV VLNRVLPNDIR++ W
Sbjct: 138 DKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGW 197

Query: 262 SPAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYR 83
            PAP+DFHARFSCLSREYKY FWK +L+I A+E AG K VG+HDFRNFCKMDAANVHNYR
Sbjct: 198 CPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYR 257

Query: 82  RHISSFEISSCNERCEGDQLWAMTIKG 2
           R I+ FEISS + R   +QLW + I+G
Sbjct: 258 RCITLFEISSTDVRYNDNQLWVIKIRG 284


>gb|EXB37798.1| tRNA pseudouridine(38/39) synthase [Morus notabilis]
          Length = 448

 Score =  299 bits (766), Expect = 7e-79
 Identities = 161/279 (57%), Positives = 189/279 (67%), Gaps = 20/279 (7%)
 Frame = -2

Query: 778 SDGDNV--DLVSTKGSADERCNNAEQREGSGCFGEVREASPCETSPGRERKN-------- 629
           +DGDN+   L S   S   R    +Q  GS       E+   +T   + ++         
Sbjct: 8   ADGDNLLSSLQSLVNSLQLRIQKEKQLGGSSANSMESESGGTKTKKKKSKEKASGCDTSI 67

Query: 628 IKHSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCG 449
           + H  KR+VALK+MYFGQRFYGFASEAQMDPTVESE+F ALKKT LLV DKKES YSRCG
Sbjct: 68  MNHQCKRYVALKLMYFGQRFYGFASEAQMDPTVESELFGALKKTRLLVGDKKESQYSRCG 127

Query: 448 RTDKGVSSIGQVISLFLRSKL-KDREMHANDYKEISPKDTLEEIDYVRVLNRVLPNDIRV 272
           RTDKGVSS+GQV++LFLRS L K    H N  + IS +    EIDYVRVLNR LPNDIRV
Sbjct: 128 RTDKGVSSVGQVVALFLRSNLTKAHSNHENSSEVISGEQLEGEIDYVRVLNRSLPNDIRV 187

Query: 271 ISWSPAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVH 92
           + W P PI F ARFSCL+REYKY FW+  L++  ME AGKKF+G+HDFRNFCKMDA NVH
Sbjct: 188 LGWCPVPIGFSARFSCLNREYKYFFWEESLNLLEMESAGKKFIGEHDFRNFCKMDALNVH 247

Query: 91  NYRRHISSFEISSCNE---------RCEGDQLWAMTIKG 2
           NYRR +SSFEIS  +          R EG QLWA+ I+G
Sbjct: 248 NYRRCVSSFEISPTDSSVRTIKYFARFEGKQLWAIKIEG 286


>ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
           [Glycine max]
          Length = 425

 Score =  298 bits (764), Expect = 1e-78
 Identities = 158/267 (59%), Positives = 189/267 (70%), Gaps = 9/267 (3%)
 Frame = -2

Query: 775 DGDNVDLVSTKGSADERCNNAEQ---------REGSGCFGEVREASPCETSPGRERKNIK 623
           + +N  L+S    AD RC+  E+         RE     G  +     E  PG   + + 
Sbjct: 22  EAENAKLLSQL--ADCRCHEMEKKLHIPDEKGRESKK--GNRKSEEKIEKMPGYNTRFMS 77

Query: 622 HSSKRHVALKIMYFGQRFYGFASEAQMDPTVESEIFKALKKTMLLVSDKKESMYSRCGRT 443
           H SKR+VALK+ YFG+RFYGFASEAQM+PTVESE+FKA +KT LLV DKKES YSRCGRT
Sbjct: 78  HHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRT 137

Query: 442 DKGVSSIGQVISLFLRSKLKDREMHANDYKEISPKDTLEEIDYVRVLNRVLPNDIRVISW 263
           DKGVSS+GQVI+LFLRS LK    + N    +   +   EIDYV VLNRVLPNDIR++ W
Sbjct: 138 DKGVSSVGQVIALFLRSNLKISATN-NGNSGVVLDEQHGEIDYVGVLNRVLPNDIRIMGW 196

Query: 262 SPAPIDFHARFSCLSREYKYLFWKGDLDISAMERAGKKFVGQHDFRNFCKMDAANVHNYR 83
            PAP+DFHARFSCLSREYKY FWK +L+I A+E AG K VG+HDFRNFCKMDAANVHNYR
Sbjct: 197 CPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYR 256

Query: 82  RHISSFEISSCNERCEGDQLWAMTIKG 2
           R I+ FEISS + R   +QLW + I+G
Sbjct: 257 RCITLFEISSTDVRYNDNQLWVIKIRG 283