BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00011811
         (223 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]    63   5e-08

>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
           gi|449529106|ref|XP_004171542.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/73 (47%), Positives = 40/73 (54%)
 Frame = +3

Query: 3   TILPSLIHYKKFSDTKSLLVSFIXXXXXXXXXXXXXXXXXXXXXXXKALLDTAIGAYIQA 182
           T+LPSL  +  FSD KSLL+SFI                       K LLDT+IGAY+Q 
Sbjct: 94  TLLPSLFRHYMFSDAKSLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQM 153

Query: 183 RQPHLALQIFKKM 221
            QPHLA QIF KM
Sbjct: 154 DQPHLATQIFNKM 166


>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/73 (49%), Positives = 43/73 (58%)
 Frame = +3

Query: 3   TILPSLIHYKKFSDTKSLLVSFIXXXXXXXXXXXXXXXXXXXXXXXKALLDTAIGAYIQA 182
           ++LPSL  ++KFSD KSLL+ FI                       KALLDTAIGAY+Q+
Sbjct: 93  SLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHLSILRLTSPS----KALLDTAIGAYVQS 148

Query: 183 RQPHLALQIFKKM 221
            QPH A QIFKKM
Sbjct: 149 GQPHHAFQIFKKM 161


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/73 (49%), Positives = 43/73 (58%)
 Frame = +3

Query: 3   TILPSLIHYKKFSDTKSLLVSFIXXXXXXXXXXXXXXXXXXXXXXXKALLDTAIGAYIQA 182
           ++LPSL  ++KFSD KSLL+ FI                       KALLDTAIGAY+Q+
Sbjct: 93  SLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHLSILRLTSPS----KALLDTAIGAYVQS 148

Query: 183 RQPHLALQIFKKM 221
            QPH A QIFKKM
Sbjct: 149 GQPHHAFQIFKKM 161