BLASTX nr result
ID: Cocculus23_contig00010488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00010488
(1568 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containi... 96 3e-17
ref|XP_006451657.1| hypothetical protein CICLE_v10007619mg [Citr... 96 3e-17
emb|CBI15551.3| unnamed protein product [Vitis vinifera] 96 4e-17
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-17
ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutr... 94 1e-16
ref|XP_007036762.1| Tetratricopeptide repeat (TPR)-like superfam... 94 1e-16
gb|EXB25868.1| hypothetical protein L484_012294 [Morus notabilis... 94 2e-16
ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-16
ref|XP_007160512.1| hypothetical protein PHAVU_002G328100g [Phas... 92 6e-16
ref|XP_007160511.1| hypothetical protein PHAVU_002G328000g [Phas... 91 1e-15
ref|XP_006393386.1| hypothetical protein EUTSA_v10011306mg [Eutr... 91 1e-15
ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-15
ref|XP_007210320.1| hypothetical protein PRUPE_ppa002162mg [Prun... 91 1e-15
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ... 91 1e-15
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula] 91 1e-15
ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containi... 90 2e-15
ref|XP_002872815.1| pentatricopeptide repeat-containing protein ... 90 2e-15
ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Caps... 90 3e-15
ref|XP_006660540.1| PREDICTED: pentatricopeptide repeat-containi... 89 7e-15
ref|XP_002318526.2| pentatricopeptide repeat-containing family p... 89 7e-15
>ref|XP_006490750.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Citrus sinensis]
Length = 778
Score = 96.3 bits (238), Expect = 3e-17
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ISK+VGRLIILRD+ RFHHF+GGSCSCGDYW
Sbjct: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
>ref|XP_006451657.1| hypothetical protein CICLE_v10007619mg [Citrus clementina]
gi|557554883|gb|ESR64897.1| hypothetical protein
CICLE_v10007619mg [Citrus clementina]
Length = 707
Score = 96.3 bits (238), Expect = 3e-17
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ISK+VGRLIILRD+ RFHHF+GGSCSCGDYW
Sbjct: 662 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 707
>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 95.9 bits (237), Expect = 4e-17
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNA+K ISK+VGRLIILRDS RFHHFNGG CSCGDYW
Sbjct: 640 KNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 766
Score = 95.9 bits (237), Expect = 4e-17
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNA+K ISK+VGRLIILRDS RFHHFNGG CSCGDYW
Sbjct: 721 KNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
>ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutrema salsugineum]
gi|557089963|gb|ESQ30671.1| hypothetical protein
EUTSA_v10011302mg [Eutrema salsugineum]
Length = 650
Score = 94.4 bits (233), Expect = 1e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIKC++KV GRLIILRD+ RFHHF GSCSCGDYW
Sbjct: 605 KNLRVCEDCHNAIKCMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 650
>ref|XP_007036762.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|590665507|ref|XP_007036763.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
gi|590665511|ref|XP_007036764.1| Tetratricopeptide repeat
(TPR)-like superfamily protein isoform 1 [Theobroma
cacao] gi|508774007|gb|EOY21263.1| Tetratricopeptide
repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|508774008|gb|EOY21264.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508774009|gb|EOY21265.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 768
Score = 94.4 bits (233), Expect = 1e-16
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ISK+VGRLIILRDS RFHHF GSCSCGDYW
Sbjct: 723 KNLRVCEDCHNAIKYISKIVGRLIILRDSNRFHHFREGSCSCGDYW 768
>gb|EXB25868.1| hypothetical protein L484_012294 [Morus notabilis]
gi|587990941|gb|EXC75162.1| hypothetical protein
L484_000356 [Morus notabilis]
Length = 773
Score = 94.0 bits (232), Expect = 2e-16
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCH+A K ISK+VGRLIILRDS RFHHF+GGSCSCGDYW
Sbjct: 728 KNLRVCEDCHSAFKIISKIVGRLIILRDSYRFHHFSGGSCSCGDYW 773
>ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Fragaria vesca subsp. vesca]
Length = 780
Score = 92.8 bits (229), Expect = 4e-16
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ISK+VGR IILRDS RFHHF+ GSCSCGDYW
Sbjct: 735 KNLRVCEDCHNAIKYISKIVGRTIILRDSNRFHHFSEGSCSCGDYW 780
>ref|XP_007160512.1| hypothetical protein PHAVU_002G328100g [Phaseolus vulgaris]
gi|561033927|gb|ESW32506.1| hypothetical protein
PHAVU_002G328100g [Phaseolus vulgaris]
Length = 783
Score = 92.0 bits (227), Expect = 6e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVC+DCHNAI+ ISK+VGRLIILRDS RFHHFN G CSCGDYW
Sbjct: 738 KNLRVCQDCHNAIRHISKIVGRLIILRDSNRFHHFNDGICSCGDYW 783
>ref|XP_007160511.1| hypothetical protein PHAVU_002G328000g [Phaseolus vulgaris]
gi|561033926|gb|ESW32505.1| hypothetical protein
PHAVU_002G328000g [Phaseolus vulgaris]
Length = 691
Score = 91.3 bits (225), Expect = 1e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ISK+VGRLIILRDS RFHHF+ G CSCGDYW
Sbjct: 646 KNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 691
>ref|XP_006393386.1| hypothetical protein EUTSA_v10011306mg [Eutrema salsugineum]
gi|557089964|gb|ESQ30672.1| hypothetical protein
EUTSA_v10011306mg [Eutrema salsugineum]
Length = 647
Score = 91.3 bits (225), Expect = 1e-15
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCH+AIKC++K+ GRLIILRD RFHHF GSCSCGDYW
Sbjct: 602 KNLRVCEDCHSAIKCMAKITGRLIILRDKKRFHHFKDGSCSCGDYW 647
>ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Cicer arietinum]
Length = 763
Score = 91.3 bits (225), Expect = 1e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ISK+VGRLIILRDS RFHHF+ G CSCGDYW
Sbjct: 718 KNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFSKGICSCGDYW 763
>ref|XP_007210320.1| hypothetical protein PRUPE_ppa002162mg [Prunus persica]
gi|462406055|gb|EMJ11519.1| hypothetical protein
PRUPE_ppa002162mg [Prunus persica]
Length = 707
Score = 91.3 bits (225), Expect = 1e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVC DCHNAIK ISK+VGR IILRDS RFHHF+GG+CSCGDYW
Sbjct: 662 KNLRVCGDCHNAIKYISKIVGRTIILRDSHRFHHFSGGNCSCGDYW 707
>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 980
Score = 91.3 bits (225), Expect = 1e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCH+AIK ISK+VGRLIILRDS RFHHFN G CSCGDYW
Sbjct: 721 KNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 63.2 bits (152), Expect = 3e-07
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
K + VCEDC +AIK +SK+VGRLI LRDS H FN CSCG+YW
Sbjct: 938 KRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESICSCGEYW 980
>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 91.3 bits (225), Expect = 1e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCH+AIK ISK+VGRLIILRDS RFHHFN G CSCGDYW
Sbjct: 721 KNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
>ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Glycine max]
Length = 769
Score = 90.1 bits (222), Expect = 2e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVC+DCHNAIK ISK+VGRLIILRDS RFHHF+ G CSCGDYW
Sbjct: 724 KNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 769
>ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297318652|gb|EFH49074.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 776
Score = 90.1 bits (222), Expect = 2e-15
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ++KV GRLIILRD+ RFHHF GSCSCGDYW
Sbjct: 731 KNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
>ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Capsella rubella]
gi|482558914|gb|EOA23106.1| hypothetical protein
CARUB_v10003899mg [Capsella rubella]
Length = 756
Score = 89.7 bits (221), Expect = 3e-15
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ++K+ GRLIILRD+ RFHHF GSCSCGDYW
Sbjct: 711 KNLRVCEDCHNAIKYMAKITGRLIILRDNNRFHHFKDGSCSCGDYW 756
>ref|XP_006660540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Oryza brachyantha]
Length = 745
Score = 88.6 bits (218), Expect = 7e-15
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVC DCHNA K IS + GRLIILRDS RFHHF GGSCSCGDYW
Sbjct: 700 KNLRVCGDCHNAFKYISAIEGRLIILRDSNRFHHFKGGSCSCGDYW 745
>ref|XP_002318526.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550326387|gb|EEE96746.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 578
Score = 88.6 bits (218), Expect = 7e-15
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -2
Query: 1567 KNLRVCEDCHNAIKCISKVVGRLIILRDSTRFHHFNGGSCSCGDYW 1430
KNLRVCEDCHNAIK ISK+VGRLIILRD+ RFH+F GGSCSC D+W
Sbjct: 533 KNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 578