BLASTX nr result
ID: Cocculus23_contig00010463
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00010463 (2551 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec... 1262 0.0 ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citr... 1216 0.0 ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation spec... 1214 0.0 ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation spec... 1213 0.0 ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation spec... 1213 0.0 ref|XP_002517902.1| cleavage and polyadenylation specificity fac... 1209 0.0 ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation spec... 1209 0.0 ref|XP_007038718.1| Cleavage and polyadenylation specificity fac... 1206 0.0 ref|XP_007220238.1| hypothetical protein PRUPE_ppa001928mg [Prun... 1205 0.0 ref|XP_007152251.1| hypothetical protein PHAVU_004G114000g [Phas... 1204 0.0 ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation spec... 1199 0.0 gb|EXC19142.1| Cleavage and polyadenylation specificity factor s... 1196 0.0 ref|XP_006369487.1| Cleavage and polyadenylation specificity fac... 1194 0.0 ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation spec... 1174 0.0 ref|XP_006827641.1| hypothetical protein AMTR_s00009p00247750 [A... 1172 0.0 ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation spec... 1169 0.0 ref|XP_004308076.1| PREDICTED: cleavage and polyadenylation spec... 1162 0.0 ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] g... 1138 0.0 ref|NP_197776.1| cleavage and polyadenylation specificity factor... 1133 0.0 gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity fa... 1132 0.0 >ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed protein product [Vitis vinifera] Length = 740 Score = 1262 bits (3266), Expect = 0.0 Identities = 624/740 (84%), Positives = 670/740 (90%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFLVDCGWNDHFDPS LQPL VASTID VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSFLQPLARVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 +HPDTLHLGALPYAMK LGLSAPVYSTEPVYRLGLLTMYD YLSRKQVSDFD FTLDDID Sbjct: 61 AHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+TRLTYSQNYHL GKGEGIVIAPHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 R LNGTVLESF RPAVLITDAYNALNNQP+RRQRDQEFLD +LKTLR +GNVLLPVDTAG Sbjct: 181 RLLNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDVILKTLRGDGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE++LILEQYW QHHL+YP+FFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL Sbjct: 241 RVLELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LKHVTLLI+KSELE PDGPK+VLASMASLE GFSHD+FVEWATDAKNLVLF+ER QF T Sbjct: 301 LKHVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFAT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVTMSKRVPLVGEEL AYEEEQ RIKKEEALKASLSKE+++ S G Sbjct: 361 LARMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASRG 420 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 D + DPMVID+ +SSD P VG HRDI IDGFVPPSTS+ PMFPF+++S EWDD Sbjct: 421 SDNKLGDPMVIDTTTPPASSDVAVPHVGGHRDILIDGFVPPSTSVAPMFPFYENSSEWDD 480 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINP+DYV+K+EDMDQ+ M VG DL+ KLDE +A+LI D+ PSKV+SNELTVQVKC Sbjct: 481 FGEVINPEDYVIKDEDMDQATMQVGDDLNGKLDEGAASLIFDTTPSKVISNELTVQVKCM 540 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 LVYMDFEGRSDGRSIKSIL+HVAPLKLVLVHGSAEATEHLKQHCLKHVC HVYAPQIGET Sbjct: 541 LVYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGET 600 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSE+LMSNVLFKKLGDYE+AWVDAEVGKTESG H Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTPPPSHD 660 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQKGTGT--QQVVIEG 346 +VFVGD+K+ADFKQFLASKGIQVEF+GGALRCGEYVTLRKVGDASQKG G QQ+V+EG Sbjct: 661 TVFVGDIKMADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDASQKGGGAIIQQIVMEG 720 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL +EYYKIR+YLYSQ+YLL Sbjct: 721 PLCDEYYKIREYLYSQYYLL 740 >ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citrus clementina] gi|568874619|ref|XP_006490411.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform X1 [Citrus sinensis] gi|557523821|gb|ESR35188.1| hypothetical protein CICLE_v10004414mg [Citrus clementina] Length = 739 Score = 1216 bits (3145), Expect = 0.0 Identities = 603/741 (81%), Positives = 668/741 (90%), Gaps = 3/741 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPLSGV++ENPLSYL+SIDGFNFL+DCGWNDHFDPSLLQPL VASTID VLL Sbjct: 1 MGTSVQVTPLSGVFNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALPYAMK LGLSAPV+STEPVYRLGLLTMYD YLSR+QVS+FD FTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQ++TRLTYSQNYHLSGKGEGIV+APHVAGHLLGGT WKITKDGEDVIYAVD+N RKE Sbjct: 121 SAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYNRRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 +HLNGTVLESF RPAVLITDAYNAL+NQP R+QR+ F DA+ KTLRA GNVLLPVD+AG Sbjct: 181 KHLNGTVLESFVRPAVLITDAYNALHNQPPRQQREM-FQDAISKTLRAGGNVLLPVDSAG 239 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE++LILE YW +H L+YP++FLTYV+SSTIDYVKSFLEWM DSI KSFE +RDNAFL Sbjct: 240 RVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSRDNAFL 299 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LKHVTLLINKSEL+NAPDGPK+VLASMASLE GFSHD+FVEWA+D KNLVLFTER QFGT Sbjct: 300 LKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTERGQFGT 359 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVTMS+RVPLVGEEL AYEEEQ R+KKEEALKASL KEE+ S G Sbjct: 360 LARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEESKASLG 419 Query: 1239 PDVNVV-DPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWD 1063 PD N+ DPMVID+ NA++S+D P G +RDI IDGFVPPSTS+ PMFPF++++ EWD Sbjct: 420 PDNNLSGDPMVIDANNANASADVVEPHGGRYRDILIDGFVPPSTSVAPMFPFYENNSEWD 479 Query: 1062 DFGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKC 883 DFGEVINPDDY++K+EDMDQ+AM +GGD D KLDE SA+LILD+KPSKVVSNELTVQVKC Sbjct: 480 DFGEVINPDDYIIKDEDMDQAAMHIGGD-DGKLDEGSASLILDAKPSKVVSNELTVQVKC 538 Query: 882 SLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGE 703 L+++D+EGR+DGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVC HVY PQI E Sbjct: 539 LLIFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTPQIEE 598 Query: 702 TIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPH 523 TIDVTSDLCAYKVQLSE+LMSNVLFKKLGDYEIAWVDAEVGKTE+GM PH Sbjct: 599 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTPAPPH 658 Query: 522 KSVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIE 349 KSV VGDLK+AD K FL+SKGIQVEFAGGALRCGEYVT+RKVG A QK G+GTQQ+VIE Sbjct: 659 KSVLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQIVIE 718 Query: 348 GPLTEEYYKIRDYLYSQFYLL 286 GPL E+YYKIR YLYSQFYLL Sbjct: 719 GPLCEDYYKIRAYLYSQFYLL 739 >ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform X1 [Glycine max] Length = 739 Score = 1214 bits (3142), Expect = 0.0 Identities = 609/740 (82%), Positives = 660/740 (89%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFLVDCGWNDHFDPS LQPL VASTID VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SH DTLHLGALPYAMK LGLSAPVYSTEPVYRLGLLTMYD YLSRKQVS+FD FTLDDID Sbjct: 61 SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQ++TRLTYSQN+H SGKGEGIVIAPHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGTVL SF RPAVLITDAYNALNNQP RRQ D+EF D + KTLRA GNVLLPVDT G Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+IL+LE YW +L+YP++FLTYVASSTIDYVKSFLEWMSD+IAKSFE TR+N FL Sbjct: 241 RVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LK+VTLLINK+EL+NAPDGPKVVLASMASLE GFSHD+FVEWA D KNLVLFTER QF T Sbjct: 301 LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFAT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKV +SKRVPLVGEEL AYEEEQNRIKK EALKASL KEE+L TSHG Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKK-EALKASLMKEEELKTSHG 419 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 D ++ DPMVIDSGN H + T P G +RDIFIDGFVPPSTS+ P+FP ++++ EWDD Sbjct: 420 ADNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDD 479 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYV+K+EDMDQ+AM G D++ KLDE +A+LILD+KPSKVVS+E TVQV+CS Sbjct: 480 FGEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCS 539 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 LVYMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVC HVYAPQI ET Sbjct: 540 LVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEET 599 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSE+LMSNVLFKKLGDYEIAWVDA VGKTE+ PHK Sbjct: 600 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHK 659 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 SV VGDLKLAD KQFL+SKG+QVEFAGGALRCGEYVTLRKVGDASQK G+G QQ+VIEG Sbjct: 660 SVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEG 719 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL E+YYKIRDYLYSQFYLL Sbjct: 720 PLCEDYYKIRDYLYSQFYLL 739 >ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Cicer arietinum] Length = 740 Score = 1213 bits (3139), Expect = 0.0 Identities = 599/740 (80%), Positives = 664/740 (89%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFL+D GWND+FDPSLLQPL VAS+ID VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDVGWNDNFDPSLLQPLSKVASSIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALPYAMK LGLSAPV+STEPVYRLGLLTMYDH+LSRKQ+SDFD FTLD ID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDHFLSRKQISDFDLFTLDHID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQ++TRLTYSQN+HLSGKGEGIVIAPH AGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQSVTRLTYSQNHHLSGKGEGIVIAPHNAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGTVL SF RPAVLITDAYNALNNQP RRQ+D+EF D + KTLRA GNVLLPVDTAG Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+IL+LE YW +L+YP++FLTYVASSTIDYVKSFLEWMSDSIAKSFE TR+N FL Sbjct: 241 RVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LK+VTL++NK++ +NAPDGPKVVLASMASLE GFSHD+FVEW D KNLVLFTER QFGT Sbjct: 301 LKYVTLMVNKTDFDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTERGQFGT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVT+SKRVPLVGEEL AYEEEQNRIKKEEALKASL KEE+L SHG Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRIKKEEALKASLLKEEELKASHG 420 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 D N DPMVID+GN S +AT G +RD+FIDGFVPPSTS+ PMFP ++++ EWDD Sbjct: 421 ADNNTSDPMVIDTGNKQPSPEATVQRNGGYRDVFIDGFVPPSTSVAPMFPCYENTSEWDD 480 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYV+K+EDMDQ+A VGGD++ KLDE A+LILD+KPSKV+S+E TVQV+CS Sbjct: 481 FGEVINPDDYVIKDEDMDQNANHVGGDINGKLDEGPASLILDTKPSKVLSDERTVQVRCS 540 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L+YMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEAT+HLKQHCLK+VC HVYAPQI ET Sbjct: 541 LIYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATDHLKQHCLKNVCPHVYAPQIEET 600 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSERLMSNVLFKKLG+YEIAWVDAEVGK E+ M PHK Sbjct: 601 IDVTSDLCAYKVQLSERLMSNVLFKKLGEYEIAWVDAEVGKAENDMLSLLPVSGPPRPHK 660 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 SV VGDLKLADFKQFL++KG+ VEFAGGALRCGEYVT+RKVGDA+QK G+GTQQ++IEG Sbjct: 661 SVLVGDLKLADFKQFLSTKGVPVEFAGGALRCGEYVTVRKVGDAAQKGAGSGTQQIIIEG 720 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL E+YYKIRDYLYSQFYLL Sbjct: 721 PLCEDYYKIRDYLYSQFYLL 740 >ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Cucumis sativus] Length = 738 Score = 1213 bits (3138), Expect = 0.0 Identities = 604/740 (81%), Positives = 665/740 (89%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+S+D FNFL+DCGWNDHFDP+LLQPL VASTID VL+ Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALPYAMK LGLSAPV+STEPVYRLGLLTMYD +++RKQVS+FD FTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQ +TRLTYSQN+HLSGKGEGIVIAPHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGT+LESF RPAVLITDAYNALNNQP RRQ+D+EF D + KTLRANGNVLLPVDTAG Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+I ILE YW++ L+YP+FFLTYVASSTIDY+KSFLEWMSD+IAKSFEHTR+NAFL Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LKHVTLLINKSEL+NAPDGPKVVLASMASLE G+SHD+FV+WA DAKNLVLF+ER QFGT Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVT+SKRVPL G+EL AYEEEQNR KKEEALKASL KEE SHG Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASHG 419 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 D + DPM+ID+ +++ + D S G +RDI IDGFVPPST + PMFPF++++ WDD Sbjct: 420 ADNDTGDPMIIDA-SSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDD 478 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYV+K+EDMDQ+AM GGD+D KLDE++ANLILD KPSKVVSNELTVQVKCS Sbjct: 479 FGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 538 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L YMDFEGRSDGRSIKSIL+HVAPLKLVLVHG+AEATEHLKQHCLK+VC HVYAPQI ET Sbjct: 539 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 598 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSE+LMSNVLFKKLGDYEI W+DAEVGKTE+G PHK Sbjct: 599 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHK 658 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 SV VGDLK+ADFKQFLASKGIQVEFAGGALRCGEYVTLRKV DASQK G+GTQQVVIEG Sbjct: 659 SVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEG 718 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL E+YYKIR+ LYSQFYLL Sbjct: 719 PLCEDYYKIRELLYSQFYLL 738 >ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] gi|223542884|gb|EEF44420.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] Length = 740 Score = 1209 bits (3129), Expect = 0.0 Identities = 602/741 (81%), Positives = 662/741 (89%), Gaps = 3/741 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL+GVY+ENPLSYL+SID FN L+DCGWNDHFDPSLLQPL VASTID VLL Sbjct: 1 MGTSVQVTPLNGVYNENPLSYLISIDNFNLLIDCGWNDHFDPSLLQPLSRVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SH DTLHLGALPYAMK LGLSAPVYSTEPVYRLGLLTMYD YLSRK VS+FD F+LDDID Sbjct: 61 SHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVSEFDLFSLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQNITRLTYSQN+HLSGKGEGIVIAPHVAGHLLGGT WKITKDGEDV+YAVDFNHRKE Sbjct: 121 SAFQNITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLD-AVLKTLRANGNVLLPVDTA 1783 RHLNGTVLESF RPAVLITDAYNAL+NQP R+QRD+EFL+ +LKTL A GNVLLPVDTA Sbjct: 181 RHLNGTVLESFVRPAVLITDAYNALSNQPPRQQRDKEFLEKTILKTLEAGGNVLLPVDTA 240 Query: 1782 GRVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 1603 GRVLE++LILEQ+W L+YP+FFLTYV+SSTIDYVKSFLEWMSDSIAKSFE +RDNAF Sbjct: 241 GRVLELLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNAF 300 Query: 1602 LLKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFG 1423 LLKHVTLLINK+EL+NAP+ PKVVLASMASLE GFSHD+FVEWA D KNLVLFTER QFG Sbjct: 301 LLKHVTLLINKNELDNAPNVPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQFG 360 Query: 1422 TLARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSH 1243 TLAR LQADPPPKAVKVTMS+RVPLVG+EL AYEEEQ R+KKEE L AS+ KEE+ SH Sbjct: 361 TLARMLQADPPPKAVKVTMSRRVPLVGDELIAYEEEQKRLKKEEELNASMIKEEEAKVSH 420 Query: 1242 GPDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWD 1063 GPD N+ DPM+ID+ N ++S DA +RDI DGFVPPSTS+ PMFPF++++ EWD Sbjct: 421 GPDSNLSDPMIIDASNNNASLDAVGSQGTGYRDILFDGFVPPSTSVAPMFPFYENTTEWD 480 Query: 1062 DFGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKC 883 DFGEVINPDDYV+K++DMDQ M VGGD+D K DE SA+ ILD+KPSKVVS+ELTVQVKC Sbjct: 481 DFGEVINPDDYVIKDDDMDQ-PMHVGGDIDGKFDEGSASWILDTKPSKVVSSELTVQVKC 539 Query: 882 SLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGE 703 SL+YMD+EGRSDGRSIKSILAHVAPLKLVLVHGSAE+TEHLKQHCLKHVC HVYAPQI E Sbjct: 540 SLIYMDYEGRSDGRSIKSILAHVAPLKLVLVHGSAESTEHLKQHCLKHVCPHVYAPQIEE 599 Query: 702 TIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPH 523 TIDVTSDLCAYKVQLSE+LMSNVLFKKLGD+EIAWVDAEVGKTES PH Sbjct: 600 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDFEIAWVDAEVGKTESDALSLLPISTSAPPH 659 Query: 522 KSVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIE 349 KSV VGDLK+ADFKQFLASKG+QVEFAGGALRCGEYVTLRKVG+ +QK G+GTQQ+VIE Sbjct: 660 KSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNINQKGGGSGTQQIVIE 719 Query: 348 GPLTEEYYKIRDYLYSQFYLL 286 GPL E+YYKIR+YLYSQFYLL Sbjct: 720 GPLCEDYYKIREYLYSQFYLL 740 >ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform X2 [Citrus sinensis] Length = 738 Score = 1209 bits (3127), Expect = 0.0 Identities = 602/741 (81%), Positives = 667/741 (90%), Gaps = 3/741 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPLSGV++ENPLSYL+SIDGFNFL+DCGWNDHFDPSLLQPL VASTID VLL Sbjct: 1 MGTSVQVTPLSGVFNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALPYAMK LGLSAPV+STEPVYRLGLLTMYD YLSR+QVS+FD FTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQ++TRLTYSQNYHLSGKGEGIV+APHVAGHLLGGT WKITKDGEDVIYAVD+N RKE Sbjct: 121 SAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYNRRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 +HLNGTVLESF RPAVLITDAYNAL+NQP R+QR+ F DA+ KTLRA GNVLLPVD+AG Sbjct: 181 KHLNGTVLESFVRPAVLITDAYNALHNQPPRQQREM-FQDAISKTLRAGGNVLLPVDSAG 239 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE++LILE YW +H L+YP++FLTYV+SSTIDYVKSFLEWM DSI KSFE +RDNAFL Sbjct: 240 RVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSRDNAFL 299 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LKHVTLLINKSEL+NAPDGPK+VLASMASLE GFSHD+FVEWA+D KNLVLFTER QFGT Sbjct: 300 LKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTERGQFGT 359 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVTMS+RVPLVGEEL AYEEEQ R+KKEEALKASL KEE+ S G Sbjct: 360 LARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEESKASLG 419 Query: 1239 PDVNVV-DPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWD 1063 PD N+ DPMVID+ NA++S+ P G +RDI IDGFVPPSTS+ PMFPF++++ EWD Sbjct: 420 PDNNLSGDPMVIDANNANASA-VVEPHGGRYRDILIDGFVPPSTSVAPMFPFYENNSEWD 478 Query: 1062 DFGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKC 883 DFGEVINPDDY++K+EDMDQ+AM +GGD D KLDE SA+LILD+KPSKVVSNELTVQVKC Sbjct: 479 DFGEVINPDDYIIKDEDMDQAAMHIGGD-DGKLDEGSASLILDAKPSKVVSNELTVQVKC 537 Query: 882 SLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGE 703 L+++D+EGR+DGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVC HVY PQI E Sbjct: 538 LLIFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTPQIEE 597 Query: 702 TIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPH 523 TIDVTSDLCAYKVQLSE+LMSNVLFKKLGDYEIAWVDAEVGKTE+GM PH Sbjct: 598 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTPAPPH 657 Query: 522 KSVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIE 349 KSV VGDLK+AD K FL+SKGIQVEFAGGALRCGEYVT+RKVG A QK G+GTQQ+VIE Sbjct: 658 KSVLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQIVIE 717 Query: 348 GPLTEEYYKIRDYLYSQFYLL 286 GPL E+YYKIR YLYSQFYLL Sbjct: 718 GPLCEDYYKIRAYLYSQFYLL 738 >ref|XP_007038718.1| Cleavage and polyadenylation specificity factor 100 isoform 1 [Theobroma cacao] gi|508775963|gb|EOY23219.1| Cleavage and polyadenylation specificity factor 100 isoform 1 [Theobroma cacao] Length = 742 Score = 1206 bits (3120), Expect = 0.0 Identities = 597/742 (80%), Positives = 662/742 (89%), Gaps = 4/742 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFL+DCGWND FDPSLLQPL VA TID VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDPSLLQPLSRVAPTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALPYAMK GLSAPVYSTEPV+RLGLLTMYD YLSRKQVS+F+ FTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQFGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFELFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+TRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGT WKITKDGEDVIYAVDFN RKE Sbjct: 121 SAFQNVTRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNRRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQP--NRRQRDQEFLDAVLKTLRANGNVLLPVDT 1786 +HLNGTVLESF RPAVLITDAYNALNNQP +R+RD++F+D + +TL A GNVLLPVDT Sbjct: 181 KHLNGTVLESFVRPAVLITDAYNALNNQPPKQQRERDRDFVDTISRTLEAGGNVLLPVDT 240 Query: 1785 AGRVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNA 1606 GRVLE++L+LE++W L+YP+FFLTYV+SSTIDYVKSFLEWMSD+IAKSFE +RDNA Sbjct: 241 TGRVLELLLVLEEHWAMKSLNYPIFFLTYVSSSTIDYVKSFLEWMSDAIAKSFETSRDNA 300 Query: 1605 FLLKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQF 1426 FLL+HVTLLI+K+EL+ PDGPKVVLASMASLE GFSHD+FVEWA D KNLVLFTER QF Sbjct: 301 FLLRHVTLLISKNELDKVPDGPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQF 360 Query: 1425 GTLARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTS 1246 GTLAR LQADPPPKAVKV MS+RVPLVGEEL A+EEEQNR+KKEEALKASL KEE+ S Sbjct: 361 GTLARMLQADPPPKAVKVMMSRRVPLVGEELIAHEEEQNRLKKEEALKASLIKEEESKAS 420 Query: 1245 HGPDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEW 1066 PD++ DPMVID+ N HSS D +RDI IDGFVPPSTS+ PMFPF++++ +W Sbjct: 421 IVPDISSSDPMVIDTNNKHSSLDGLGQHGSGYRDILIDGFVPPSTSVAPMFPFYENASDW 480 Query: 1065 DDFGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVK 886 DDFGEVINPDDYV+K+EDMDQ+AM VGGD+D K+DE+SA+LI+D+ PSKV+SNELTVQVK Sbjct: 481 DDFGEVINPDDYVIKDEDMDQAAMHVGGDMDGKVDEASASLIVDTTPSKVISNELTVQVK 540 Query: 885 CSLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIG 706 SL+YMD+EGRSDGRS+KSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVC HVYAPQI Sbjct: 541 SSLIYMDYEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIE 600 Query: 705 ETIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXP 526 ETIDVTSDLCAYKVQLSE+LMSNVLFKKLGDYEIAWVDAEVGKTE+ M P Sbjct: 601 ETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENEMLSLLPLSTPAPP 660 Query: 525 HKSVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVI 352 HKSV VGDLKLADFKQFLASKG++VEFAGGALRCGEYVTLRKVG ASQK G+GTQQ++I Sbjct: 661 HKSVVVGDLKLADFKQFLASKGVKVEFAGGALRCGEYVTLRKVGFASQKGGGSGTQQIII 720 Query: 351 EGPLTEEYYKIRDYLYSQFYLL 286 EGPL E+YYKIRDYLYSQFYLL Sbjct: 721 EGPLCEDYYKIRDYLYSQFYLL 742 >ref|XP_007220238.1| hypothetical protein PRUPE_ppa001928mg [Prunus persica] gi|462416700|gb|EMJ21437.1| hypothetical protein PRUPE_ppa001928mg [Prunus persica] Length = 740 Score = 1205 bits (3118), Expect = 0.0 Identities = 590/740 (79%), Positives = 657/740 (88%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFL+DCGWNDHFDPSLL+PL VAST+D VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLEPLSRVASTVDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALP+AMK LGLSA VYSTEPVYRLGLLTMYD YLSRKQVSDFD FTLDDID Sbjct: 61 SHPDTLHLGALPFAMKQLGLSAVVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+TRLTY+QN+HLSGKGEGIVI+PHV+GHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYAQNHHLSGKGEGIVISPHVSGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 +HLNG SF RPAVLITDAYNALNNQP RRQ+D+EF D + KTLR++GNVLLPVDTAG Sbjct: 181 KHLNGINQASFVRPAVLITDAYNALNNQPYRRQKDKEFTDTIKKTLRSDGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE++ ILE W +L+YP+FFLTYVASSTIDYVKSFLEWMSDSIAKSFE TR+NAF+ Sbjct: 241 RVLELVQILESCWADENLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENAFI 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LK +TLL+NKSEL+NAPDGPKVVLASMASLE GFSHD+FVEWATD KNLVLFTER QFGT Sbjct: 301 LKRITLLVNKSELDNAPDGPKVVLASMASLEAGFSHDIFVEWATDPKNLVLFTERAQFGT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVTMS+RVPLVGEEL AYEEEQNRI+K+EALKASL KEE+ ++ G Sbjct: 361 LARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQNRIRKDEALKASLIKEEESKSAQG 420 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 DV+ DP V+D+ N HS DA P G +RD+ IDGF PPSTS PMFPF++++ +WDD Sbjct: 421 ADVSTSDPTVVDASNTHSLLDAAGPHGGGYRDMLIDGFTPPSTSAAPMFPFYENNSDWDD 480 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYV+K+ DMDQ AM VGGD+D KLDE SA+LILD++PSKVV+ ELTVQVKCS Sbjct: 481 FGEVINPDDYVIKDADMDQGAMHVGGDMDGKLDEGSASLILDTRPSKVVATELTVQVKCS 540 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L+YMDFEGRSD RSIKSIL+H+APLKLVLVHG+AEATEHLKQHCL HVC HVYAPQI ET Sbjct: 541 LIYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLTHVCPHVYAPQIEET 600 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSE+LMSNVLFKKLGDYEIAWVD+E GKTE+G PH+ Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDSEAGKTENGALSLLPISTPAPPHE 660 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 SV VGDLK+A+FKQFL+ G+QVEFAGGALRCGEYVTLRKVGDAS K G+GTQQ+VIEG Sbjct: 661 SVLVGDLKMANFKQFLSDNGVQVEFAGGALRCGEYVTLRKVGDASHKGGGSGTQQIVIEG 720 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL E+YYKIR+YLYSQFYLL Sbjct: 721 PLCEDYYKIREYLYSQFYLL 740 >ref|XP_007152251.1| hypothetical protein PHAVU_004G114000g [Phaseolus vulgaris] gi|561025560|gb|ESW24245.1| hypothetical protein PHAVU_004G114000g [Phaseolus vulgaris] Length = 739 Score = 1204 bits (3116), Expect = 0.0 Identities = 602/740 (81%), Positives = 655/740 (88%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SID FNFL+DCGWNDHFDPSLLQPL VASTID VL+ Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDDFNFLIDCGWNDHFDPSLLQPLSRVASTIDAVLV 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SH D LHLGALPYAMK LGLSAPVYSTEPVYRLGLLTMYD YLSRKQVS+FD FTLDDID Sbjct: 61 SHADILHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQ++TRLTYSQN+HL+GKGEGIVIAPHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQSVTRLTYSQNHHLTGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGT L SF RPAVLITDAYNALNNQP RRQ D+EF D + KTLRA GNVLLPVDTAG Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+IL+LE YW +L+YP++FLTYVASSTIDYVKSFLEWMSDSIAKSFE TR+N FL Sbjct: 241 RVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LK++TLLINK+EL+NAP+GPKVVLASMASLE GFSHD+FVEWA D KNLVLFTER QF T Sbjct: 301 LKYITLLINKTELDNAPEGPKVVLASMASLEAGFSHDIFVEWANDMKNLVLFTERGQFAT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKV +SKRVPLVGEEL AYEEEQNRIKK EALKASL KEE+L TSHG Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKK-EALKASLMKEEELKTSHG 419 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 D N DPMV+DSGN H + P G +RDI+IDGFVPPSTS+ PMFP ++++ EWDD Sbjct: 420 SDNNNSDPMVVDSGNNHVPPEVAGPRGGGYRDIYIDGFVPPSTSVAPMFPCYENTLEWDD 479 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYV+K+EDM+Q AM GGD++ KLDE +A LILD+KPSKVVS+E TVQVKCS Sbjct: 480 FGEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKCS 539 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 LVYMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVC HV APQI ET Sbjct: 540 LVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVSAPQIDET 599 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKV LSE+LMSNVLFKKLGDYE+AWVDA VGKTES PHK Sbjct: 600 IDVTSDLCAYKVLLSEKLMSNVLFKKLGDYEVAWVDAVVGKTESDTLSVLPVSEAAPPHK 659 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 SV VGDLKLAD KQFL+SKG+QVEFAGGALRCGEYVTLRKVGDA+QK G+G QQ+VIEG Sbjct: 660 SVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDATQKGGGSGAQQIVIEG 719 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL E+YYKIRDYLYSQFYLL Sbjct: 720 PLCEDYYKIRDYLYSQFYLL 739 >ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform 1 [Glycine max] Length = 738 Score = 1199 bits (3101), Expect = 0.0 Identities = 602/740 (81%), Positives = 655/740 (88%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFLVDCGWNDHFDPSLLQPL VASTID VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSLLQPLARVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SH DTLHLGALPYAMK LGLSAPVYSTEPVYRLGLLTMYD YLSRKQVS+FD FTLDDID Sbjct: 61 SHADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 S+FQ++TRLTYSQN+H SGKGEGIVIAPHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SSFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGTVL SF RPAVLITDAYNALNNQP RRQ D+EF D + KTLR GNVLLPVDT G Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLREGGNVLLPVDTVG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+IL+LE YW +L+YP++FLTYVASSTIDYVKSFLEWMSD+IAKSFE TR+N FL Sbjct: 241 RVLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LK+VTLLINK+EL+NAPDGPKVVLASMASLE GFSH++FVEWA D KNLVLFTER QF T Sbjct: 301 LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVKNLVLFTERGQFAT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKV +SKRV LVGEEL AYEEEQNRIKK EALKASL KEE+ TSHG Sbjct: 361 LARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKK-EALKASLMKEEEFKTSHG 419 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 D N D MVIDSGN H + + P G +RDIFIDGFVPP TS+ PMFP ++++ EWDD Sbjct: 420 ADNNTSDSMVIDSGNNHVPPEVSGPRGGGYRDIFIDGFVPPLTSVAPMFPCYENTSEWDD 479 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYV+K+EDMDQ+AM GGD++ KLDE +A+LILD+KPSKVVS+E TVQV+CS Sbjct: 480 FGEVINPDDYVIKDEDMDQTAM-HGGDINGKLDEGAASLILDTKPSKVVSDERTVQVRCS 538 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 LVYMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVC HVYAPQ+ ET Sbjct: 539 LVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQLEET 598 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKV LSE+LMSNVLFKKLGDYE+AWVDA VGKTE+ PHK Sbjct: 599 IDVTSDLCAYKVLLSEKLMSNVLFKKLGDYELAWVDAVVGKTENDPLSLLPVSGAAPPHK 658 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 SV VGDLKLAD KQFL+SKG+QVEFAGGALRCGEYVTLRKVGDASQK G+G QQ+VIEG Sbjct: 659 SVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEG 718 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL E+YYKIRDYLYSQFYLL Sbjct: 719 PLCEDYYKIRDYLYSQFYLL 738 >gb|EXC19142.1| Cleavage and polyadenylation specificity factor subunit 2 [Morus notabilis] Length = 741 Score = 1196 bits (3093), Expect = 0.0 Identities = 591/741 (79%), Positives = 652/741 (87%), Gaps = 3/741 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFL+DCGWNDH DPS+LQPL VAST+D VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHLDPSILQPLTKVASTVDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SH DTLHLGALPYAMK GLSAPVYSTEPVYRLGLLTMYD +L RKQVS+FD FTLDDID Sbjct: 61 SHADTLHLGALPYAMKQFGLSAPVYSTEPVYRLGLLTMYDQFLWRKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+TRLTY+QN+HLSGKGEGIVI+PHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYAQNHHLSGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 +HLNG SF RPAVLITDAYNALNNQP RRQ D+EF D + KTLR +G VLLPVDTAG Sbjct: 181 KHLNGINPASFVRPAVLITDAYNALNNQPYRRQMDKEFTDTIKKTLRIDGKVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE++ ILE W + LSYP++FLTYVASSTIDYVKSFLEWMSDSIAKSFE TRDNAFL Sbjct: 241 RVLELLQILESCWAEESLSYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRDNAFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LKHVTLL+NK++L NAPDGPKVVLASMASLE GFSHD+FVEWATDA+NLVLFTER QFGT Sbjct: 301 LKHVTLLVNKTDLNNAPDGPKVVLASMASLEAGFSHDIFVEWATDARNLVLFTERGQFGT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVTMSKRVPLVGEEL AYEEEQNRIK+EEALKASL KEE+ SHG Sbjct: 361 LARMLQADPPPKAVKVTMSKRVPLVGEELIAYEEEQNRIKREEALKASLIKEEESKASHG 420 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 D+N+ DPMVID+ + D P G +RD+FIDGFVP STS+ PMFPFF+ + EWDD Sbjct: 421 TDINISDPMVIDASITNPLPDVAGPHSGGYRDVFIDGFVPSSTSVAPMFPFFETTSEWDD 480 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPD+Y++K+EDMDQ AM V GD+D KLDE+SA+LILD+KPSKV+SNELTV VKCS Sbjct: 481 FGEVINPDNYIIKDEDMDQGAMHVSGDMDGKLDEASASLILDTKPSKVISNELTVPVKCS 540 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L+YMDFEGRSD RSIKSIL+H+APLKLVLVHG+AEATEHLKQHC+K VC HVYAPQI ET Sbjct: 541 LLYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCIKQVCPHVYAPQIEET 600 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 ID+TSDLCAYKVQLSE+LMSNVLFKKLGD+E AWVD+EVGKTE+G PHK Sbjct: 601 IDITSDLCAYKVQLSEKLMSNVLFKKLGDHETAWVDSEVGKTENGTLSLLPLSSAAPPHK 660 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDASQK--GTGTQQVVIE 349 SV VGDLK+A+FKQFLA G+QVEFA GGALRCGEYVTLRKVGDAS K G GTQQ+VIE Sbjct: 661 SVLVGDLKMANFKQFLADNGVQVEFAGGGALRCGEYVTLRKVGDASHKGGGPGTQQIVIE 720 Query: 348 GPLTEEYYKIRDYLYSQFYLL 286 GPL EEYYKIR+YLYSQF+LL Sbjct: 721 GPLCEEYYKIREYLYSQFFLL 741 >ref|XP_006369487.1| Cleavage and polyadenylation specificity factor family protein [Populus trichocarpa] gi|550348036|gb|ERP66056.1| Cleavage and polyadenylation specificity factor family protein [Populus trichocarpa] Length = 740 Score = 1194 bits (3088), Expect = 0.0 Identities = 590/740 (79%), Positives = 655/740 (88%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPLSGVY+ENPLSYL+SIDGFNFL+DCGWNDHFDPSLLQPL VAS ID VLL Sbjct: 1 MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASKIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 S+ D LHLGALP+AMK GL+APV+STEPVYRLGLLTMYD SRK VS+FD F+LDDID Sbjct: 61 SYGDMLHLGALPFAMKQFGLNAPVFSTEPVYRLGLLTMYDQSFSRKAVSEFDLFSLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN TRLTYSQN+HLSGKGEGIVIAPHVAGHLLGGT WKITKDGEDV+YAVDFNHRKE Sbjct: 121 SAFQNFTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGTVLESF RPAVLITDAYNALN+QP+R+QRD++FL+ +LKTL GNVLLPVD+AG Sbjct: 181 RHLNGTVLESFYRPAVLITDAYNALNSQPSRQQRDKQFLETILKTLEGGGNVLLPVDSAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE++LILEQ+W Q L+YP+FFL+YV+SSTIDY+KSFLEWMSDSIAKSFE +RDNAFL Sbjct: 241 RVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEWMSDSIAKSFETSRDNAFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 +KHVTLLI+K EL+NA GPKVVLAS+ASLE GFSHD+F EWA D KNLVLFTER QFGT Sbjct: 301 MKHVTLLISKDELDNASTGPKVVLASVASLEAGFSHDIFAEWAADVKNLVLFTERGQFGT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVK+TMS+RVPLVG+EL AYEEEQ R+K+EE LKASL KEE+ SHG Sbjct: 361 LARMLQADPPPKAVKMTMSRRVPLVGDELIAYEEEQKRLKREEELKASLIKEEESKVSHG 420 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 PD N+ DPMVIDSGN HS D HRDI IDGFVPPSTS+ PMFPF+++S EWD+ Sbjct: 421 PDNNLSDPMVIDSGNTHSPLDVVGSRGSGHRDILIDGFVPPSTSVAPMFPFYENSLEWDE 480 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYVV++EDMDQ+AM VG D+D KLDE SA+LILD+KPSKVVSNELTVQVKCS Sbjct: 481 FGEVINPDDYVVQDEDMDQAAMHVGADIDGKLDEGSASLILDTKPSKVVSNELTVQVKCS 540 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L+YMD+EGRSDGRSIKSIL HVAPLKLV+VHGSAEATEHLKQH L VYAPQI ET Sbjct: 541 LIYMDYEGRSDGRSIKSILTHVAPLKLVMVHGSAEATEHLKQHFLNIKNVQVYAPQIEET 600 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSE+LMSNVLFKKLGDYE+AWVDAEVGKTE+GM PHK Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTENGMLSLLPISSPAPPHK 660 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQKG--TGTQQVVIEG 346 SV VGDLK+ADFKQFLASKG+QVEFAGGALRCGEYVTLRKVG+ SQKG +GTQQ++IEG Sbjct: 661 SVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNPSQKGGTSGTQQIIIEG 720 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL E+YYKIR+YLYSQFYLL Sbjct: 721 PLCEDYYKIREYLYSQFYLL 740 >ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Solanum lycopersicum] Length = 739 Score = 1174 bits (3038), Expect = 0.0 Identities = 586/740 (79%), Positives = 649/740 (87%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFLVDCGWNDHFD SLLQPL VAST+D VL+ Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDTSLLQPLSRVASTVDAVLI 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SH DT HLGALPYAMK LGLSAP+Y+TEPVYRLGLLTMYD YLSRKQVS+FD FTLDDID Sbjct: 61 SHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+TRLTYSQN+++SGKGEGIVIAP VAGHLLGGT W+ITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGTVLESF RPAVLITDA+NALNNQP RRQRDQEFLDA+ +TL GNVLLPVDTAG Sbjct: 181 RHLNGTVLESFVRPAVLITDAFNALNNQPPRRQRDQEFLDAIERTLNVGGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+IL LEQ+W Q LS P++FL+YV+SSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL Sbjct: 241 RVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 L+ + L+INKS LE AP GPKVV+ASMASLE GFSHDLFVEWA D KNLV+FTER QFGT Sbjct: 301 LRKIKLVINKSALEEAP-GPKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTERGQFGT 359 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQ+DPPPKAVKVTMS+R+PLVGEEL AYEEEQNRIK+EEALKA+L KEE+ S G Sbjct: 360 LARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEESKASVG 419 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 +V DPM +D+ H SS+A+ G +D+ IDGFV S+SI PMFPF+D++ EWDD Sbjct: 420 AEVVTDDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSIAPMFPFYDNTSEWDD 479 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYVVK+++M+QS M V GDL+ KLDE SANLILD+ PSKV S+ELTVQVKCS Sbjct: 480 FGEVINPDDYVVKDDNMEQSFMHVDGDLNGKLDEGSANLILDTTPSKVESSELTVQVKCS 539 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L+YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVC VYAPQ+ ET Sbjct: 540 LLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAPQLEET 599 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSE+LMS VLFKKLGDYEIAWVDAEVGKTE+ M PHK Sbjct: 600 IDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGPSPPHK 659 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 +V VGDLK++DFKQFLASKG+QVEF GGALRCGEYVT+RKVGDASQK G QQ+V+EG Sbjct: 660 TVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLEG 719 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL+EEYYKIR+YLYS FY L Sbjct: 720 PLSEEYYKIREYLYSHFYSL 739 >ref|XP_006827641.1| hypothetical protein AMTR_s00009p00247750 [Amborella trichopoda] gi|548832261|gb|ERM95057.1| hypothetical protein AMTR_s00009p00247750 [Amborella trichopoda] Length = 737 Score = 1172 bits (3033), Expect = 0.0 Identities = 587/741 (79%), Positives = 646/741 (87%), Gaps = 3/741 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQ+TPLSGV+SENPLSYLLS+DGFNFLVDCGWND FDP LLQPL V+STID VLL Sbjct: 1 MGTSVQLTPLSGVHSENPLSYLLSLDGFNFLVDCGWNDFFDPELLQPLSRVSSTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDT+HLGALPYAMK GLSAPVYSTEPV++LGLLTMYDHYLSR+QVSDFD F+LDDID Sbjct: 61 SHPDTVHLGALPYAMKQFGLSAPVYSTEPVHKLGLLTMYDHYLSRRQVSDFDLFSLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 +AFQN+TRLTYSQ+YHLSGKGEGIVI PHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 AAFQNVTRLTYSQDYHLSGKGEGIVITPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGTVLESF RPAVLITDAYNALNNQP+ RQRDQEFLDA+L+TLR +G VLLPVDTAG Sbjct: 181 RHLNGTVLESFVRPAVLITDAYNALNNQPSTRQRDQEFLDAILRTLRGDGKVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+ILILEQYW QHHLSYP+ FLT VA+STI+Y KS LEWM DSI KSFEHTRDN F+ Sbjct: 241 RVLELILILEQYWTQHHLSYPIAFLTNVATSTIEYAKSSLEWMIDSIGKSFEHTRDNVFV 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LK+ ++INK ELE P+GPKVVLASMASLE GFSHD+FVEWA D+KNLV+FTER QFGT Sbjct: 301 LKNFNIIINKKELEKLPEGPKVVLASMASLEEGFSHDIFVEWAVDSKNLVVFTERAQFGT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTS-H 1243 LAR LQ DPPPK VKVTM KRVPLVGEEL+AYEEEQNRIKKEEALKASLSKE+DL S Sbjct: 361 LARMLQVDPPPKVVKVTMHKRVPLVGEELKAYEEEQNRIKKEEALKASLSKEDDLKASCI 420 Query: 1242 GPDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWD 1063 PD ++ DPMVIDS SS+ SP + +RD+ IDGFVPPSTS+ PMFPF+++S EWD Sbjct: 421 VPDKSLSDPMVIDSAGGLISSEVASPRIVGYRDVLIDGFVPPSTSVSPMFPFYENSREWD 480 Query: 1062 DFGEVINPDDYVVKEEDM--DQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQV 889 DFGEVINPDDY +KEEDM S ++GG L+ K DE S +++LDSKPSKVVSNELTVQV Sbjct: 481 DFGEVINPDDYAIKEEDMLDPTSVAVLGGGLEDKFDEDSNDMLLDSKPSKVVSNELTVQV 540 Query: 888 KCSLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQI 709 KCSL+Y DFEGRSD RSIK+ILAHVAPLKLVLVHGSAEATEHLKQHCLK+VCSHVYAPQI Sbjct: 541 KCSLIYKDFEGRSDSRSIKTILAHVAPLKLVLVHGSAEATEHLKQHCLKNVCSHVYAPQI 600 Query: 708 GETIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXX 529 GETIDVTSDLCAYKV+LSERLMSNVLFKKLGDYEIAW+D EV +T+ GM Sbjct: 601 GETIDVTSDLCAYKVRLSERLMSNVLFKKLGDYEIAWIDGEVNETD-GMLTLVPLSTGPP 659 Query: 528 PHKSVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQKGTGTQQVVIE 349 HKSV VGDLKLADFKQFLASKG+ EF+ G LRCGE +TLRKVGD+ KG TQQV IE Sbjct: 660 LHKSVLVGDLKLADFKQFLASKGVPAEFSKGFLRCGENITLRKVGDS--KG-ATQQVGIE 716 Query: 348 GPLTEEYYKIRDYLYSQFYLL 286 GPLTEEYYKIR+ LYSQFYLL Sbjct: 717 GPLTEEYYKIRELLYSQFYLL 737 >ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Solanum tuberosum] Length = 739 Score = 1169 bits (3023), Expect = 0.0 Identities = 582/740 (78%), Positives = 648/740 (87%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GV++ENPLSYL+SIDGFNFLVDCGWNDHFD SLLQPL VAST+D VL+ Sbjct: 1 MGTSVQVTPLCGVFNENPLSYLVSIDGFNFLVDCGWNDHFDTSLLQPLSRVASTVDAVLI 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SH DT HLGALPYAMK LGLSAP+Y+TEPVYRLGLLTMYD YLSRKQVS+FD FTLDDID Sbjct: 61 SHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+TRLTYSQN+++SGKGEGIVIAP VAGHLLGGT W+ITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 RHLNGTVLESF RPAVLITDA+NALNNQP RRQRDQEFLDA+ +T+ GNVLLPVDTAG Sbjct: 181 RHLNGTVLESFVRPAVLITDAFNALNNQPPRRQRDQEFLDAIERTVNVGGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE+IL LEQ+W Q LS P++FL+YV+SSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL Sbjct: 241 RVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 L+ + L+INKS LE AP G KVV+ASMASLE GFSHDLFVEWA D KNLV+FTER QFGT Sbjct: 301 LRKIKLVINKSALEEAP-GSKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTERGQFGT 359 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQ+DPPPKAVKVTMS+R+PLVGEEL AYEEEQNRIK+EEALKA+L KEE+ S G Sbjct: 360 LARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEESKASVG 419 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 +V DPM +D+ H SS+A+ G +D+ IDGFV S+S+ PMFPF+D++ EWDD Sbjct: 420 AEVVTNDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSVAPMFPFYDNTSEWDD 479 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 FGEVINPDDYVVK+++M+QS M V GDL+ KLDE SANLILD+ PSKV S+ELTVQVKCS Sbjct: 480 FGEVINPDDYVVKDDNMEQSLMHVDGDLNGKLDEGSANLILDTTPSKVESSELTVQVKCS 539 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L+YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVC VYAPQ+ ET Sbjct: 540 LLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAPQLEET 599 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYKVQLSE+LMS VLFKKLGDYEIAWVDAEVGKTE+ M PHK Sbjct: 600 IDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGPAPPHK 659 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQK--GTGTQQVVIEG 346 +V VGDLK++DFKQFLASKG+QVEF GGALRCGEYVT+RKVGDASQK G QQ+V+EG Sbjct: 660 TVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLEG 719 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 PL+EEYYKIR+YLYS FY L Sbjct: 720 PLSEEYYKIREYLYSHFYSL 739 >ref|XP_004308076.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Fragaria vesca subsp. vesca] Length = 739 Score = 1162 bits (3005), Expect = 0.0 Identities = 568/740 (76%), Positives = 645/740 (87%), Gaps = 2/740 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQ+TPL GVY+ENPLSYL+SIDGFN L+DCGWNDHFDPSLLQPL VAS +D VLL Sbjct: 1 MGTSVQITPLCGVYNENPLSYLVSIDGFNLLIDCGWNDHFDPSLLQPLSRVASAVDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALPYA KHLGL+APV+STEPVYRLGLLTMYD YLSRKQVS+FD FTLDDID Sbjct: 61 SHPDTLHLGALPYAAKHLGLAAPVFSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+TRLT +Q++HL GKGEGIVI+PHVAGHLLGGT WKITKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTNAQHHHLPGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNALNNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTAG 1780 +HLNG SF RPAVLITDAYNALNNQP RRQ+D+E + + KTLR+ GNVLLPVDTAG Sbjct: 181 KHLNGINQSSFVRPAVLITDAYNALNNQPYRRQKDRELTETIKKTLRSQGNVLLPVDTAG 240 Query: 1779 RVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 1600 RVLE++ ILE W + L +P++FLTYVASSTIDYVK+FLEWMSD++AKSFE TRDNAF+ Sbjct: 241 RVLELLQILESCWNEESLPFPIYFLTYVASSTIDYVKNFLEWMSDAMAKSFETTRDNAFI 300 Query: 1599 LKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFGT 1420 LK V LL+NKSEL+NAP+GPKVVLASMASLE GFSHD+FVEWATDAKNLV FTER QFGT Sbjct: 301 LKRVKLLVNKSELDNAPEGPKVVLASMASLEAGFSHDIFVEWATDAKNLVFFTERAQFGT 360 Query: 1419 LARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSHG 1240 LAR LQADPPPKAVKVTMSKR+PLVGEEL AYEEEQNRIKKEEALKASL KEE+L SHG Sbjct: 361 LARMLQADPPPKAVKVTMSKRIPLVGEELIAYEEEQNRIKKEEALKASLIKEEELKASHG 420 Query: 1239 PDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWDD 1060 DV++ DP+VID+ A S D P G RDI IDGF PPSTS+ PMFPF++++ EW+D Sbjct: 421 TDVSMSDPLVIDTSIAKSLPD-VGPRGGGCRDILIDGFTPPSTSVAPMFPFYENNSEWED 479 Query: 1059 FGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKCS 880 +GEVINPDDYV+K+EDM+Q +MLVGGD+D K+DE++A+LILDS+PSKVVS+ELTV VKCS Sbjct: 480 YGEVINPDDYVIKDEDMNQGSMLVGGDMDGKIDEAAASLILDSRPSKVVSSELTVPVKCS 539 Query: 879 LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGET 700 L+YMDFEGRSD RS+KSIL+H+APLKLVLVHG+AEATEHLKQHCLKHVC HVYAPQ+ ET Sbjct: 540 LIYMDFEGRSDARSVKSILSHMAPLKLVLVHGTAEATEHLKQHCLKHVCPHVYAPQLEET 599 Query: 699 IDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPHK 520 IDVTSDLCAYK QLSE LMSN++FKKLG+ EIAW D+EV KTE M PHK Sbjct: 600 IDVTSDLCAYKAQLSEGLMSNIIFKKLGENEIAWFDSEVRKTEDEMLSLQPCSTPARPHK 659 Query: 519 SVFVGDLKLADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDASQKGTG--TQQVVIEG 346 + VGDLK+ DFKQFLA G+QVEFAGGALRCGE+VT+RKVGDAS KG G +QQ+VIEG Sbjct: 660 PILVGDLKMGDFKQFLADNGVQVEFAGGALRCGEHVTIRKVGDASHKGGGASSQQIVIEG 719 Query: 345 PLTEEYYKIRDYLYSQFYLL 286 P E++YKIR+YLYS FYLL Sbjct: 720 PACEDFYKIREYLYSHFYLL 739 >ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] gi|297317917|gb|EFH48339.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] Length = 739 Score = 1138 bits (2944), Expect = 0.0 Identities = 563/742 (75%), Positives = 645/742 (86%), Gaps = 4/742 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPLSGVY+ENPLSYL+SIDGFNFL+DCGWND FD SLL+PL VAS+ID VLL Sbjct: 1 MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASSIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLHLGALPYAMK LGLSAPVY+TEPV+RLGLLTMYD +LSRKQVSDFD FTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+ RLTYSQNYHLSGKGEGIVIAPHVAGH+LGG+ W+ITKDGEDVIYAVD+NHRKE Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNAL-NNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTA 1783 RHLNGTVL+SF RPAVLITDAY+AL NQ R+QRD+EFLD + K L GNVLLPVDTA Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240 Query: 1782 GRVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 1603 GRVLE++LILEQ+W Q S+P++FLTYV+SSTIDYVKSFLEWMSDSI+KSFE +RDNAF Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300 Query: 1602 LLKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFG 1423 LL+HVTLLINK++L+NAP GPKVVLASMASLE GF+ ++FVEWA D +NLVLFTE QFG Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360 Query: 1422 TLARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSH 1243 TLAR LQ+ PPPK VKVTMSKRVPL GEEL AYEEEQNR+K+EEAL+ASL KEE+ SH Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420 Query: 1242 GPDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWD 1063 G D N +PMVID+ H + P+ ++DI IDGFVPPS+S+ PMFPF+D++ EWD Sbjct: 421 GSDDNSSEPMVIDTKTTHDVVGSHGPA---YKDILIDGFVPPSSSVAPMFPFYDNTSEWD 477 Query: 1062 DFGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKC 883 DFGE+INPDDYV+K+EDMD+ AM GGD+D +LDE++A+L+LD++PSKV+SNEL V V C Sbjct: 478 DFGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVISNELIVTVSC 537 Query: 882 SLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGE 703 SLV MD+EGRSDGRSIKS++AHV+PLKLVLVH AEATEHLKQHCL ++C HVYAPQI E Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597 Query: 702 TIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPH 523 T+DVTSDLCAYKVQLSE+LMSNV+FKKLGD E+AWVD+EVGKTES M PH Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTESDMRSLLPMSGAASPH 657 Query: 522 KSVFVGDLKLADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDASQKG--TGTQQVVI 352 K V VGDLK+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKVG QKG +G QQ++I Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717 Query: 351 EGPLTEEYYKIRDYLYSQFYLL 286 EGPL E+YYKIRDYLYSQFYLL Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739 >ref|NP_197776.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis thaliana] gi|18203240|sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=AtCPSF100; Short=CPSF 100 kDa subunit; AltName: Full=Protein EMBRYO DEFECTIVE 1265; AltName: Full=Protein ENHANCED SILENCING PHENOTYPE 5 gi|10176855|dbj|BAB10061.1| cleavage and polyadenylation specificity factor [Arabidopsis thaliana] gi|14334618|gb|AAK59487.1| putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] gi|28393921|gb|AAO42368.1| putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] gi|332005845|gb|AED93228.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis thaliana] Length = 739 Score = 1133 bits (2930), Expect = 0.0 Identities = 559/742 (75%), Positives = 643/742 (86%), Gaps = 4/742 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFL+DCGWND FD SLL+PL VASTID VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLH+GALPYAMK LGLSAPVY+TEPV+RLGLLTMYD +LSRKQVSDFD FTLDDID Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+ RLTYSQNYHLSGKGEGIVIAPHVAGH+LGG+ W+ITKDGEDVIYAVD+NHRKE Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNAL-NNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTA 1783 RHLNGTVL+SF RPAVLITDAY+AL NQ R+QRD+EFLD + K L GNVLLPVDTA Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240 Query: 1782 GRVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 1603 GRVLE++LILEQ+W Q S+P++FLTYV+SSTIDYVKSFLEWMSDSI+KSFE +RDNAF Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300 Query: 1602 LLKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFG 1423 LL+HVTLLINK++L+NAP GPKVVLASMASLE GF+ ++FVEWA D +NLVLFTE QFG Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360 Query: 1422 TLARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSH 1243 TLAR LQ+ PPPK VKVTMSKRVPL GEEL AYEEEQNR+K+EEAL+ASL KEE+ SH Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420 Query: 1242 GPDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWD 1063 G D N +PM+ID+ H + P+ ++DI IDGFVPPS+S+ PMFP++D++ EWD Sbjct: 421 GSDDNSSEPMIIDTKTTHDVIGSHGPA---YKDILIDGFVPPSSSVAPMFPYYDNTSEWD 477 Query: 1062 DFGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKC 883 DFGE+INPDDYV+K+EDMD+ AM GGD+D +LDE++A+L+LD++PSKV+SNEL V V C Sbjct: 478 DFGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSC 537 Query: 882 SLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGE 703 SLV MD+EGRSDGRSIKS++AHV+PLKLVLVH AEATEHLKQHCL ++C HVYAPQI E Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597 Query: 702 TIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPH 523 T+DVTSDLCAYKVQLSE+LMSNV+FKKLGD E+AWVD+EVGKTE M PH Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPH 657 Query: 522 KSVFVGDLKLADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDASQKG--TGTQQVVI 352 K V VGDLK+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKVG QKG +G QQ++I Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717 Query: 351 EGPLTEEYYKIRDYLYSQFYLL 286 EGPL E+YYKIRDYLYSQFYLL Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739 >gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity factor 100 kDa subunit [Arabidopsis thaliana] Length = 739 Score = 1132 bits (2929), Expect = 0.0 Identities = 559/742 (75%), Positives = 643/742 (86%), Gaps = 4/742 (0%) Frame = -2 Query: 2499 MGTSVQVTPLSGVYSENPLSYLLSIDGFNFLVDCGWNDHFDPSLLQPLKSVASTIDVVLL 2320 MGTSVQVTPL GVY+ENPLSYL+SIDGFNFL+DCGWND FD SLL+PL VASTID VLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLPRVASTIDAVLL 60 Query: 2319 SHPDTLHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFDAFTLDDID 2140 SHPDTLH+GALPYAMK LGLSAPVY+TEPV+RLGLLTMYD +LSRKQVSDFD FTLDDID Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120 Query: 2139 SAFQNITRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTAWKITKDGEDVIYAVDFNHRKE 1960 SAFQN+ RLTYSQNYHLSGKGEGIVIAPHVAGH+LGG+ W+ITKDGEDVIYAVD+NHRKE Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180 Query: 1959 RHLNGTVLESFARPAVLITDAYNAL-NNQPNRRQRDQEFLDAVLKTLRANGNVLLPVDTA 1783 RHLNGTVL+SF RPAVLITDAY+AL NQ R+QRD+EFLD + K L GNVLLPVDTA Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240 Query: 1782 GRVLEIILILEQYWQQHHLSYPVFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 1603 GRVLE++LILEQ+W Q S+P++FLTYV+SSTIDYVKSFLEWMSDSI+KSFE +RDNAF Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300 Query: 1602 LLKHVTLLINKSELENAPDGPKVVLASMASLEVGFSHDLFVEWATDAKNLVLFTERCQFG 1423 LL+HVTLLINK++L+NAP GPKVVLASMASLE GF+ ++FVEWA D +NLVLFTE QFG Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360 Query: 1422 TLARKLQADPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEALKASLSKEEDLVTSH 1243 TLAR LQ+ PPPK VKVTMSKRVPL GEEL AYEEEQNR+K+EEAL+ASL KEE+ SH Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420 Query: 1242 GPDVNVVDPMVIDSGNAHSSSDATSPSVGVHRDIFIDGFVPPSTSIHPMFPFFDDSFEWD 1063 G D N +PM+ID+ H + P+ ++DI IDGFVPPS+S+ PMFP++D++ EWD Sbjct: 421 GSDDNSSEPMIIDTKTTHDVVGSHGPA---YKDILIDGFVPPSSSVAPMFPYYDNTSEWD 477 Query: 1062 DFGEVINPDDYVVKEEDMDQSAMLVGGDLDSKLDESSANLILDSKPSKVVSNELTVQVKC 883 DFGE+INPDDYV+K+EDMD+ AM GGD+D +LDE++A+L+LD++PSKV+SNEL V V C Sbjct: 478 DFGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSC 537 Query: 882 SLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCSHVYAPQIGE 703 SLV MD+EGRSDGRSIKS++AHV+PLKLVLVH AEATEHLKQHCL ++C HVYAPQI E Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597 Query: 702 TIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWVDAEVGKTESGMXXXXXXXXXXXPH 523 T+DVTSDLCAYKVQLSE+LMSNV+FKKLGD E+AWVD+EVGKTE M PH Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPH 657 Query: 522 KSVFVGDLKLADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDASQKG--TGTQQVVI 352 K V VGDLK+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKVG QKG +G QQ++I Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717 Query: 351 EGPLTEEYYKIRDYLYSQFYLL 286 EGPL E+YYKIRDYLYSQFYLL Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739