BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00010402
         (519 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23934.3| unnamed protein product [Vitis vinifera]               79   6e-13
gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus] gi|1486...    76   5e-12
ref|XP_006306291.1| hypothetical protein CARUB_v10012156mg [Caps...    74   2e-11
gb|EPS29015.1| hypothetical protein PDE_03961 [Penicillium oxali...    74   2e-11
ref|XP_003627152.1| Ubiquitin [Medicago truncatula] gi|355521174...    74   2e-11
emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]         74   2e-11
emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]            74   3e-11
ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria ma...    74   3e-11
ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A] gi|3025...    74   3e-11
pir||S43306 polyubiquitin 6 - Geodia cydonium                          73   4e-11
ref|XP_004333233.1| ubiquitin domain containing protein [Acantha...    73   4e-11
gb|AAD44043.1|AF104026_1 polyprotein [Bovine viral diarrhea viru...    73   4e-11
gb|AAR32784.1| polyubiquitin [Clusia minor]                            73   4e-11
gb|EYU18101.1| hypothetical protein MIMGU_mgv1a004289mg [Mimulus...    73   5e-11
ref|XP_006302388.1| hypothetical protein CARUB_v10020456mg [Caps...    73   5e-11
ref|XP_006302387.1| hypothetical protein CARUB_v10020456mg [Caps...    73   5e-11
gb|AAD44039.1|AF104022_1 polyprotein [Bovine viral diarrhea viru...    73   5e-11
gb|AAD44041.1|AF104024_1 polyprotein [Bovine viral diarrhea viru...    73   5e-11
gb|AAD44036.1|AF104019_1 polyprotein [Bovine viral diarrhea viru...    73   5e-11
gb|AAD44038.1|AF104021_1 polyprotein [Bovine viral diarrhea viru...    73   5e-11

>emb|CBI23934.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 91  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 150

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITGTAHITL---LMMILRLKGG 81
           DG  L       +  +  VLR     GG   +   +TG   ITL   L ++LRL+GG
Sbjct: 151 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTGKT-ITLESTLHLVLRLRGG 203


>gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus]
           gi|148687614|gb|EDL19561.1| ubiquitin C, isoform CRA_a
           [Mus musculus]
          Length = 614

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 25/154 (16%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITGTA------HITLLMMILRLKGG 81
           DG  L       +  +  VLR     GG   +   +TG          + L ++LRL+GG
Sbjct: 204 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTGKTINYNIQKESTLHLVLRLRGG 260

Query: 80  ---------GNTILHGVHPHNSSSNADC---DKE 15
                    G TI   V P ++  N      DKE
Sbjct: 261 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 294



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGG---------GNTI 69
           DG  L    D  ++ E                   + L ++LRL+GG         G TI
Sbjct: 128 DGRTLS---DYNIQKE-------------------STLHLVLRLRGGMQIFVKTLTGKTI 165

Query: 68  LHGVHPHNSSSNADC---DKE 15
              V P ++  N      DKE
Sbjct: 166 TLEVEPSDTIENVKAKIQDKE 186



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 252 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 311

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGG---------GNTI 69
           DG  L    D  ++ E                   + L ++LRL+GG         G TI
Sbjct: 312 DGRTLS---DYNIQKE-------------------STLHLVLRLRGGMQIFVKTLTGKTI 349

Query: 68  LHGVHPHNSSSNADC---DKE 15
              V P ++  N      DKE
Sbjct: 350 TLEVEPSDTIENVKAKIQDKE 370



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 328 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 387

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGG---------GNTI 69
           DG  L    D  ++ E                   + L ++LRL+GG         G TI
Sbjct: 388 DGRTLS---DYNIQKE-------------------STLHLVLRLRGGMQIFVKTLTGKTI 425

Query: 68  LHGVHPHNSSSNADC---DKE 15
              V P ++  N      DKE
Sbjct: 426 TLEVEPSDTIENVKAKIQDKE 446



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 404 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 463

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGG---------GNTI 69
           DG  L    D  ++ E                   + L ++LRL+GG         G TI
Sbjct: 464 DGRTLS---DYNIQKE-------------------STLHLVLRLRGGMQIFVKTLTGKTI 501

Query: 68  LHGVHPHNSSSNADC---DKE 15
              V P ++  N      DKE
Sbjct: 502 TLEVEPSDTIENVKAKIQDKE 522



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 480 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 539

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 540 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTG 574



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVLDQLV 195
           MQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS--- 57

Query: 194 DAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGG---------GNTILHGVHPHNS 42
           D  ++ E                   + L ++LRL+GG         G TI   V P ++
Sbjct: 58  DYNIQKE-------------------STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 98

Query: 41  SSNADC---DKE 15
             N      DKE
Sbjct: 99  IENVKAKIQDKE 110


>ref|XP_006306291.1| hypothetical protein CARUB_v10012156mg [Capsella rubella]
           gi|482575002|gb|EOA39189.1| hypothetical protein
           CARUB_v10012156mg [Capsella rubella]
          Length = 460

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 298 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIAPDQQRLIFAGKQLE 357

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITGTAHITL 111
           DG  L       +  +  VLR     GG   +  D+TG+  ITL
Sbjct: 358 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKDLTGST-ITL 397



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 146 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQLE 205

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 206 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 240



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 222 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIAPDQQRLIFAGKQLE 281

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 282 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 316



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +L  ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 70  HLTLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIQPDQQRLIFAGKQLE 129

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 130 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTG 164



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +K LTG  I +E+   DT+DN+K +I +KEGI PD Q+L F   QL 
Sbjct: 374 HLVLRLRGGMQIFVKDLTGSTITLEVESFDTIDNVKAQIQDKEGIHPDQQRLNFAGKQLE 433

Query: 221 DGIVL 207
           DG  L
Sbjct: 434 DGHTL 438


>gb|EPS29015.1| hypothetical protein PDE_03961 [Penicillium oxalicum 114-2]
          Length = 295

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = -2

Query: 422 QNGKEMKYLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLI 243
           ++G+   +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LI
Sbjct: 203 EDGQSTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 262

Query: 242 FGEWQLNDGIVL 207
           F   QL DG  L
Sbjct: 263 FAGKQLEDGRTL 274



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/91 (46%), Positives = 55/91 (60%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG      +  VLR     GG   +   +TG
Sbjct: 204 DG---QSTLHLVLRLR---GGMQIFVKTLTG 228



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>ref|XP_003627152.1| Ubiquitin [Medicago truncatula] gi|355521174|gb|AET01628.1|
           Ubiquitin [Medicago truncatula]
          Length = 270

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 52/130 (40%), Positives = 69/130 (53%), Gaps = 23/130 (17%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITGTAHITL---------------- 111
           DG  L       +  +  VLR     GG   +   +TG   ITL                
Sbjct: 204 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTGKT-ITLEDGRTLADYNIQKEST 259

Query: 110 LMMILRLKGG 81
           L ++LRL+GG
Sbjct: 260 LHLVLRLRGG 269



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]
          Length = 538

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 45/112 (40%), Positives = 63/112 (56%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 448 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 507

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGNTIL 66
           DG     L D  ++ E                   + L ++LRL+GG N ++
Sbjct: 508 DG---RTLADYNIQKE-------------------STLHLVLRLRGGSNIVV 537



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 372 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 431

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 432 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 466



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 204 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 238



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 220 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 279

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 280 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 314



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 296 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 355

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 356 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 390



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
          Length = 208

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 56  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLE 115

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 116 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTG 150



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 132 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLE 191

Query: 221 DGIVL 207
           DG  L
Sbjct: 192 DGRTL 196


>ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
           gi|380089527|emb|CCC12626.1| unnamed protein product
           [Sordaria macrospora k-hell]
          Length = 229

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL 207
           DG  L
Sbjct: 204 DGRTL 208



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
           gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName:
           Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor gi|295930|emb|CAA31530.1| ubiquitin
           [Neurospora crassa] gi|28920189|gb|EAA29567.1| ubiquitin
           [Neurospora crassa OR74A] gi|336466506|gb|EGO54671.1|
           polyubiquitin [Neurospora tetrasperma FGSC 2508]
           gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora
           tetrasperma FGSC 2509]
          Length = 305

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 204 DGRTLSDYNIQKESTLHLVLRLR---GGMQIFVKTLTG 238



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 220 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLE 279

Query: 221 DGIVL 207
           DG  L
Sbjct: 280 DGRTL 284



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+KQKI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>pir||S43306 polyubiquitin 6 - Geodia cydonium
          Length = 448

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = -2

Query: 413 KEMKYLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGE 234
           KE  +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF  
Sbjct: 287 KETLHLVVRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 346

Query: 233 WQLNDGIVLD--QLVDAVLRTEPRPGGPWFYFDDITG 129
            QL DG  L    +    L      GG   +   +TG
Sbjct: 347 KQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTG 383



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVLD--QLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L    +    L      GG   +   +TG
Sbjct: 128 DGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTG 160



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -2

Query: 413 KEMKYLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGE 234
           KE  +LV   G GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF  
Sbjct: 139 KETLHLVRLRG-GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 197

Query: 233 WQLNDGIVLD--QLVDAVLRTEPRPGGPWFYFDDITG 129
            QL DG  L    +    L      GG   +   +TG
Sbjct: 198 KQLEDGRTLSDYNIQKETLHLVRLRGGMQIFVKTLTG 234



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = -2

Query: 413 KEMKYLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGE 234
           KE  +LV   G GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF  
Sbjct: 213 KETLHLVRLRG-GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 271

Query: 233 WQLNDGIVL 207
            QL DG  L
Sbjct: 272 KQLEDGRTL 280



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = -2

Query: 413 KEMKYLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGE 234
           KE  +LV   G GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF  
Sbjct: 362 KETLHLVRLRG-GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 420

Query: 233 WQLNDGIVL 207
            QL DG  L
Sbjct: 421 KQLEDGRTL 429



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>ref|XP_004333233.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
           Neff] gi|440789929|gb|ELR11220.1| ubiquitin domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 224

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/108 (41%), Positives = 62/108 (57%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+KQKI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGG 78
           DG     L D  ++ E                   + L ++LRL+GGG
Sbjct: 128 DG---RTLADYNIQKE-------------------STLHLVLRLRGGG 153



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT++N+KQKI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>gb|AAD44043.1|AF104026_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 216

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 54/164 (32%), Positives = 78/164 (47%)
 Frame = -2

Query: 509 QNGGGNVVAHEVQIQGSSPPRSHESSELPQNGKEMKYLVGKMGEGMQIHIKTLTGHEIPV 330
           Q G  N++ +       S PR +   E         +LV ++  GMQI +KTLTG  I +
Sbjct: 50  QRGSANILTN-----ARSLPRKNIQKE------STLHLVLRLRGGMQIFVKTLTGKTITL 98

Query: 329 EIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVLDQLVDAVLRTEPRPGGPWF 150
           E+  SDT++N+K KI +KEGI PD Q+LIF   QL DG  L    D  ++ E        
Sbjct: 99  EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS---DYNIQKE-------- 147

Query: 149 YFDDITGTAHITLLMMILRLKGGGNTILHGVHPHNSSSNADCDK 18
                      + L ++LRL+GGG  +   +  H     +  DK
Sbjct: 148 -----------STLHLVLRLRGGGPAVCKKITNHEKCHVSIMDK 180


>gb|AAR32784.1| polyubiquitin [Clusia minor]
          Length = 223

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 96  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 155

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITGTAH 120
           DG  L       +  +  VLR     GG   +   +TG  H
Sbjct: 156 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTGKDH 193



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 20  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 79

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 80  DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 114


>gb|EYU18101.1| hypothetical protein MIMGU_mgv1a004289mg [Mimulus guttatus]
          Length = 535

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 45/109 (41%), Positives = 62/109 (56%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 448 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 507

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGN 75
           DG     L D  ++ E                   + L ++LRL+GGG+
Sbjct: 508 DG---RTLADYNIQKE-------------------STLHLVLRLRGGGH 534



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 204 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 238



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 220 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 279

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 280 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 314



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 296 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 355

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 356 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 390



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 372 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 431

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 432 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 466



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>ref|XP_006302388.1| hypothetical protein CARUB_v10020456mg [Capsella rubella]
           gi|482571098|gb|EOA35286.1| hypothetical protein
           CARUB_v10020456mg [Capsella rubella]
          Length = 383

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 45/109 (41%), Positives = 62/109 (56%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 296 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 355

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGN 75
           DG     L D  ++ E                   + L ++LRL+GGG+
Sbjct: 356 DG---RTLADYNIQKE-------------------STLHLVLRLRGGGS 382



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 204 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 238



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 220 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 279

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 280 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 314



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>ref|XP_006302387.1| hypothetical protein CARUB_v10020456mg [Capsella rubella]
           gi|482571097|gb|EOA35285.1| hypothetical protein
           CARUB_v10020456mg [Capsella rubella]
          Length = 307

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 45/109 (41%), Positives = 62/109 (56%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 220 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 279

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGN 75
           DG     L D  ++ E                   + L ++LRL+GGG+
Sbjct: 280 DG---RTLADYNIQKE-------------------STLHLVLRLRGGGS 306



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 68  HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 127

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 128 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 162



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL 
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 203

Query: 221 DGIVL-------DQLVDAVLRTEPRPGGPWFYFDDITG 129
           DG  L       +  +  VLR     GG   +   +TG
Sbjct: 204 DGRTLADYNIQKESTLHLVLRLR---GGMQIFVKTLTG 238



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = -2

Query: 374 MQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLNDGIVL---- 207
           MQI +KTLTG  I +E+  SDT+DN+K KI +KEGI PD Q+LIF   QL DG  L    
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 206 ---DQLVDAVLRTEPRPGGPWFYFDDITG 129
              +  +  VLR     GG   +   +TG
Sbjct: 61  IQKESTLHLVLRLR---GGMQIFVKTLTG 86


>gb|AAD44039.1|AF104022_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 228

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 47/128 (36%), Positives = 67/128 (52%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 87  HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 146

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGNTILHGVHPHNS 42
           DG  L    D  ++ E                   + L ++LRL+GGG  +   +  H  
Sbjct: 147 DGRTLS---DYNIQKE-------------------STLHLVLRLRGGGPAVCKKITNHEK 184

Query: 41  SSNADCDK 18
              +  DK
Sbjct: 185 CHVSIMDK 192


>gb|AAD44041.1|AF104024_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 365

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 47/128 (36%), Positives = 67/128 (52%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 224 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 283

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGNTILHGVHPHNS 42
           DG  L    D  ++ E                   + L ++LRL+GGG  +   +  H  
Sbjct: 284 DGRTLS---DYNIQKE-------------------STLHLVLRLRGGGPAVCKKITNHEK 321

Query: 41  SSNADCDK 18
              +  DK
Sbjct: 322 CHVSIMDK 329


>gb|AAD44036.1|AF104019_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 344

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 47/128 (36%), Positives = 67/128 (52%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 203 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 262

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGNTILHGVHPHNS 42
           DG  L    D  ++ E                   + L ++LRL+GGG  +   +  H  
Sbjct: 263 DGRTLS---DYNIQKE-------------------STLHLVLRLRGGGPAVCKKITNHEK 300

Query: 41  SSNADCDK 18
              +  DK
Sbjct: 301 CHVSIMDK 308


>gb|AAD44038.1|AF104021_1 polyprotein [Bovine viral diarrhea virus 2]
          Length = 177

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 47/128 (36%), Positives = 67/128 (52%)
 Frame = -2

Query: 401 YLVGKMGEGMQIHIKTLTGHEIPVEIVCSDTLDNIKQKIFNKEGIDPDHQQLIFGEWQLN 222
           +LV ++  GMQI +KTLTG  I +E+  SDT++N+K KI +KEGI PD Q+LIF   QL 
Sbjct: 36  HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 95

Query: 221 DGIVLDQLVDAVLRTEPRPGGPWFYFDDITGTAHITLLMMILRLKGGGNTILHGVHPHNS 42
           DG  L    D  ++ E                   + L ++LRL+GGG  +   +  H  
Sbjct: 96  DGRTLS---DYNIQKE-------------------STLHLVLRLRGGGPAVCKKITNHEK 133

Query: 41  SSNADCDK 18
              +  DK
Sbjct: 134 CHVSIMDK 141