BLASTX nr result
ID: Cocculus23_contig00010244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00010244
(390 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325007.2| hypothetical protein POPTR_0018s09050g [Popu... 60 2e-10
ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 5e-10
gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus... 55 9e-10
ref|XP_007204677.1| hypothetical protein PRUPE_ppa000309mg [Prun... 59 9e-10
ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein lig... 56 9e-10
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera] 57 6e-08
ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citr... 56 7e-08
ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ric... 51 2e-07
ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily prot... 52 6e-07
>ref|XP_002325007.2| hypothetical protein POPTR_0018s09050g [Populus trichocarpa]
gi|550318363|gb|EEF03572.2| hypothetical protein
POPTR_0018s09050g [Populus trichocarpa]
Length = 266
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = -1
Query: 300 LLPVLHWFNYQRF*ILLT------Q*SKDLSIRK*IYGEAIGGLGARVSEAQATELKELG 139
LLPVL WFN QR IL + S + SI L +++S QA ELKEL
Sbjct: 139 LLPVLRWFNEQRSRILSSLTLDWGYDSDENSIGDVSIVVPCTKLLSKMSGDQALELKELE 198
Query: 138 RLYEEVLHENCKIFDGYFKEILSDGE 61
+YEEV+ ENCK+F YFKE++++G+
Sbjct: 199 SIYEEVIDENCKVFAKYFKEVVTNGD 224
Score = 30.4 bits (67), Expect(2) = 2e-10
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2
Query: 374 LLNVFHMDSFSARIEIVLNLFKELF 300
LLN+FH+D AR +I LF+ELF
Sbjct: 111 LLNIFHLDPSLARSQIAPVLFEELF 135
>ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Solanum
lycopersicum]
Length = 1384
Score = 57.0 bits (136), Expect(2) = 5e-10
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = -1
Query: 297 LPVLHWFNYQRF*I--LLTQ*SKDLSIRK*IYGEAIGGLGARVSEAQATELKELGRLYEE 124
+P+LHW+N+QR I LL++ +K LS +S QA++LK+L YEE
Sbjct: 248 IPILHWYNHQRSTIMPLLSEPTKSLST---------------MSREQASQLKDLENEYEE 292
Query: 123 VLHENCKIFDGYFKEIL 73
+L ENCK+F YF ++L
Sbjct: 293 ILDENCKVFATYFNDVL 309
Score = 32.3 bits (72), Expect(2) = 5e-10
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 389 DEAFRLLNVFHMDSFSARIEIVLNLFKELF 300
D A LL+VF+ D F AR+EI +F++LF
Sbjct: 214 DAALSLLHVFYTDPFIARVEIAPLVFEQLF 243
>gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus notabilis]
Length = 1365
Score = 55.1 bits (131), Expect(2) = 9e-10
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Frame = -1
Query: 300 LLPVLHWFNYQRF*ILLTQ*SK------DLSIRK*IYGEAIGGLGA-----RVSEAQATE 154
LLPVL FN QR IL S+ D SI + + + + ++S+AQ +E
Sbjct: 140 LLPVLRCFNEQRTQILSNSMSRTDIDHDDYSI----CNDPVAVIPSTKSLSKMSDAQMSE 195
Query: 153 LKELGRLYEEVLHENCKIFDGYFKEIL----SDGEGSVR 49
LKEL R YEEVL ENC++ GY KE+L DG G R
Sbjct: 196 LKELEREYEEVLDENCRVLAGYLKEVLENINQDGHGQNR 234
Score = 33.5 bits (75), Expect(2) = 9e-10
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -2
Query: 389 DEAFRLLNVFHMDSFSARIEIVLNLFKELF 300
D A RLL+VF +D SAR +I LF+ELF
Sbjct: 107 DAALRLLDVFCLDPSSARSDIAPTLFEELF 136
>ref|XP_007204677.1| hypothetical protein PRUPE_ppa000309mg [Prunus persica]
gi|462400208|gb|EMJ05876.1| hypothetical protein
PRUPE_ppa000309mg [Prunus persica]
Length = 1300
Score = 58.9 bits (141), Expect(2) = 9e-10
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = -1
Query: 300 LLPVLHWFNYQRF*ILLTQ*SK------DLSIRK*IYGEAIGGLGARVSEAQATELKELG 139
LLPVLHW+N QR IL T + D SI +++S Q +ELKEL
Sbjct: 139 LLPVLHWYNEQRTQILPTLSTNVSYENDDCSISDMSIVFPCSKSLSKMSGGQTSELKELE 198
Query: 138 RLYEEVLHENCKIFDGYFKEILSDGEGS 55
YE+VL ENC++F YFK++L + + S
Sbjct: 199 SNYEKVLDENCRVFSNYFKQVLENKDAS 226
Score = 29.6 bits (65), Expect(2) = 9e-10
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 389 DEAFRLLNVFHMDSFSARIEIVLNLFKELF 300
+ A LL++FH D AR E+ LF+ELF
Sbjct: 106 EAALSLLDIFHTDPSFARTELAPVLFEELF 135
>ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
tuberosum]
Length = 1284
Score = 56.2 bits (134), Expect(2) = 9e-10
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Frame = -1
Query: 297 LPVLHWFNYQRF*IL-----LTQ*SKDLSIRK*IYGEAIGGLGARVSEAQATELKELGRL 133
+P+LHW+N+QR I+ ++ +K LS +S QA++LK+L
Sbjct: 124 IPILHWYNHQRSTIMPLFNAVSAPTKSLST---------------ISREQASQLKDLENE 168
Query: 132 YEEVLHENCKIFDGYFKEIL 73
YEE+L ENC++F YFKE+L
Sbjct: 169 YEEILDENCRVFSRYFKEVL 188
Score = 32.3 bits (72), Expect(2) = 9e-10
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 389 DEAFRLLNVFHMDSFSARIEIVLNLFKELF 300
D A LL+VF+ D F AR+EI +F++LF
Sbjct: 90 DAALSLLHVFYTDPFIARVEIAPLVFEQLF 119
>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
Length = 1618
Score = 57.0 bits (136), Expect(2) = 6e-08
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Frame = -1
Query: 300 LLPVLHWFNYQRF*ILLTQ*SKDL---SIRK*IYGEAIGGLGARV----SEAQATELKEL 142
LLPVL F QR IL + SK+L S ++ + E++ G R+ S Q +ELK L
Sbjct: 439 LLPVLQSFKDQRSRILSSLSSKNLGYDSDKRSRFEESVVVSGTRLLSKMSGGQTSELKXL 498
Query: 141 GRLYEEVLHENCKIFDGYFKEILSDGEGS 55
R YEEVL ENC++ GYF+E+L + GS
Sbjct: 499 ERDYEEVLDENCRLLVGYFREVLGNENGS 527
Score = 25.4 bits (54), Expect(2) = 6e-08
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 389 DEAFRLLNVFHMDSFSARIEIVLNLFKELF 300
+ A LLN+F D AR EI +F+E F
Sbjct: 406 EAAXSLLNIFSSDPSLARSEIAPVVFEEFF 435
>ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citrus clementina]
gi|557554431|gb|ESR64445.1| hypothetical protein
CICLE_v10007255mg [Citrus clementina]
Length = 1380
Score = 56.2 bits (134), Expect(2) = 7e-08
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Frame = -1
Query: 300 LLPVLHWFNYQRF*ILLTQ*SKDLSIRK*IYGE-------------------AIGGLGAR 178
LLPVL+W N QR IL S LS + Y L ++
Sbjct: 147 LLPVLYWHNEQRSSIL----SSSLSSLQSSYDHDDDESNDENSMSDDVSVVVPCAKLLSK 202
Query: 177 VSEAQATELKELGRLYEEVLHENCKIFDGYFKEILSDGEGS 55
+S +QA+ELKEL R YEE+L ENC++F YFK++L + + S
Sbjct: 203 MSGSQASELKELERNYEELLDENCRVFASYFKQVLENSDDS 243
Score = 25.8 bits (55), Expect(2) = 7e-08
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 374 LLNVFHMDSFSARIEIVLNLFKELF 300
LLN+F ++ AR EI LF+ELF
Sbjct: 119 LLNLFSLEPSLARSEIAPVLFEELF 143
>ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223546727|gb|EEF48225.1| F-box and wd40 domain
protein, putative [Ricinus communis]
Length = 1268
Score = 51.2 bits (121), Expect(2) = 2e-07
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = -1
Query: 300 LLPVLHWFNYQRF*ILLTQ*SKDLSIRK*IYGEAI--------GGLGARVSEAQATELKE 145
LLPVL WFN QR I S ++S A L +++S QA E +E
Sbjct: 139 LLPVLDWFNEQRSRISSASFSMNMSYDDRDEDSACDVSIILPSSKLLSKMSGGQALEFRE 198
Query: 144 LGRLYEEVLHENCKIFDGYFKEILSDGE 61
L Y++VL ENC+++ YFKEIL + +
Sbjct: 199 LEGSYDDVLDENCRVYAQYFKEILKNND 226
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 374 LLNVFHMDSFSARIEIVLNLFKELF 300
LLN+F++D AR EI +F+ELF
Sbjct: 111 LLNIFYLDPLLARSEIAPLIFQELF 135
>ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508783476|gb|EOY30732.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1332
Score = 52.4 bits (124), Expect(2) = 6e-07
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = -1
Query: 297 LPVLHWFNYQRF*IL------LTQ*SKDLSIRK*IYGEAIGGLGARVSEAQATELKELGR 136
LPVL FN QR IL + + D SI L +++S QA ELKEL R
Sbjct: 142 LPVLQRFNEQRSTILSSLSPNVNHDADDYSICDVSVVVPCSKLLSKMSGDQALELKELER 201
Query: 135 LYEEVLHENCKIFDGYFKEILSDGEGSVR 49
YEEVL ENC++ YFKE+L + + R
Sbjct: 202 NYEEVLDENCRVLVKYFKEVLENSDDGNR 230
Score = 26.6 bits (57), Expect(2) = 6e-07
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 374 LLNVFHMDSFSARIEIVLNLFKELF 300
LL VF++D AR E+ LF++LF
Sbjct: 113 LLQVFYLDPSLARSELAPTLFEDLF 137