BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00010122
         (2388 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              768   0.0  
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   756   0.0  
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T...   738   0.0  
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T...   732   0.0  
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T...   732   0.0  
ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prun...   723   0.0  
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor...   720   0.0  
ref|XP_002320019.2| FF domain-containing family protein [Populus...   701   0.0  
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   701   0.0  
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   695   0.0  
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l...   690   0.0  
ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-l...   682   0.0  
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l...   681   0.0  
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l...   681   0.0  
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...   681   0.0  
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...   681   0.0  
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T...   671   0.0  
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l...   669   0.0  
ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-l...   662   0.0  
ref|XP_003549369.2| PREDICTED: pre-mRNA-processing protein 40A-l...   659   0.0  

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  768 bits (1982), Expect = 0.0
 Identities = 406/619 (65%), Positives = 462/619 (74%), Gaps = 13/619 (2%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETAATQ- 2212
            RADASTVWKEFTTPEGRKYYYNKVTKQSKW IPEELKLAREQAEK +SQ T  E   T  
Sbjct: 257  RADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQSEMGTTSN 316

Query: 2211 DPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXS-----------GPQSIPA 2065
            +P   +V   E PST++++                                  G  +IP 
Sbjct: 317  EPAVVAVSLAETPSTASVSVSSTTSSTISGMTSSPVPVTPVVAVVNPPPVVVSGTSAIPI 376

Query: 2064 VPSPLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTST-FENTYRQDVPNAVD 1888
              S +TT+AVGV   +   TP PA  SG TG   A   P  T+ T FEN       +A +
Sbjct: 377  AQSAVTTSAVGVQPSMG--TPLPAAVSGSTGVAAAFINPNATSMTSFENLSA----DATN 430

Query: 1887 GASAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDW 1708
            GAS QD+EEAKKG+AVAGK+NVTPLEEK  D+EPLVY++KLEAKNAFKALLESANVESDW
Sbjct: 431  GASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVESDW 490

Query: 1707 TWEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEE 1528
            TW+QAM+ IINDKRYGALKTLGERKQAFNEYLGQRKK+EAEERR++QK+AREEFT MLEE
Sbjct: 491  TWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAREEFTTMLEE 550

Query: 1527 SKDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIM 1348
             K+LTSS +WSKA+ MF+DDERFKAVER+RDREDLFEN+++ELQKKER KA EE KRN M
Sbjct: 551  CKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMELQKKERTKALEEQKRNRM 610

Query: 1347 DYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXX 1168
            +YRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEY              
Sbjct: 611  EYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEREEEEQRKI 670

Query: 1167 XXXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTP 988
                  RAERKNRDEFRKLMEEHVAAG LTAK HWRDY +KVKD+  Y+AV+SNTSGSTP
Sbjct: 671  QKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSGSTP 730

Query: 987  KDLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNL 808
            KDLFEDVAEELEKQYHEDK+RIKD +KL K+T++STWT  DFK+A+ ++VGSP IS+VNL
Sbjct: 731  KDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAILDDVGSPNISDVNL 790

Query: 807  KLVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRS 628
            KLV +                     +DF+DLL S K+ITASS WED KPLFE+SQEYRS
Sbjct: 791  KLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWEDCKPLFEESQEYRS 850

Query: 627  IGDENIGREIFEEYTALLQ 571
            IG+E+ GREIFEEY A LQ
Sbjct: 851  IGEESFGREIFEEYIAHLQ 869



 Score = 66.2 bits (160), Expect = 6e-08
 Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
 Frame = -1

Query: 1869 LEEAKKGMAVAGKVN-VTP--LEEKNADE-EPLVYASKLEAKNAFKALLESANVESDWTW 1702
            ++++   +AVA   +  TP  L E  A+E E   +  K   K+A K  L    + S WT+
Sbjct: 712  VKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMK--LSKVTIASTWTF 769

Query: 1701 EQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESK 1522
                  I++D     +  +   K  F E L + K+ E +E + K++R  ++F  +L   K
Sbjct: 770  GDFKAAILDDVGSPNISDVN-LKLVFEELLDRIKEKEEKEAK-KRQRLADDFNDLLRSKK 827

Query: 1521 DLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDY 1342
            ++T+S+ W     +FE+ + ++++       ++FE Y+  LQ+K +   ++E KR     
Sbjct: 828  EITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQEKAK---EKERKREEEKA 884

Query: 1341 RQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLE 1225
            ++  E  +  K   + RK +DR  + E+     + D  E
Sbjct: 885  KKEKEREEKEKRKEKERKEKDRDREREKGKERSRKDETE 923


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  756 bits (1951), Expect = 0.0
 Identities = 399/618 (64%), Positives = 455/618 (73%), Gaps = 12/618 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETAATQ- 2212
            RADASTVWKEFTTPEGRKYYYNKVTKQSKW IPEELKLAREQAEK +SQ T  E   T  
Sbjct: 261  RADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQSEMGTTSN 320

Query: 2211 DPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXS-----------GPQSIPA 2065
            +P   +V   E PST++++                                  G  +IP 
Sbjct: 321  EPAVVAVSLAETPSTASVSVSSTTSSTISGMTSSPVPVTPVVAVVNPPPVVVSGTSAIPI 380

Query: 2064 VPSPLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDG 1885
              S +TT+AVGV   +   TP PA  SG TG     +                  +A +G
Sbjct: 381  AQSAVTTSAVGVQPSMG--TPLPAAVSGSTGVAANLSA-----------------DATNG 421

Query: 1884 ASAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWT 1705
            AS QD+EEAKKG+AVAGK+NVTPLEEK  D+EPLVY++KLEAKNAFKALLESANVESDWT
Sbjct: 422  ASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVESDWT 481

Query: 1704 WEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEES 1525
            W+QAM+ IINDKRYGALKTLGERKQAFNEYLGQRKK+EAEERR++QK+AREEFT MLEE 
Sbjct: 482  WDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAREEFTTMLEEC 541

Query: 1524 KDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMD 1345
            K+LTSS +WSKA+ MF+DDERFKAVER+RDREDLFEN+++ELQKKER KA EE KRN M+
Sbjct: 542  KELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMELQKKERTKALEEQKRNRME 601

Query: 1344 YRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXX 1165
            YRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEY               
Sbjct: 602  YRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEREEEEQRKIQ 661

Query: 1164 XXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPK 985
                 RAERKNRDEFRKLMEEHVAAG LTAK HWRDY +KVKD+  Y+AV+SNTSGSTPK
Sbjct: 662  KEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSGSTPK 721

Query: 984  DLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLK 805
            DLFEDVAEELEKQYHEDK+RIKD +KL K+T++STWT  DFK+A+ ++VGSP IS+VNLK
Sbjct: 722  DLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAILDDVGSPNISDVNLK 781

Query: 804  LVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSI 625
            LV +                     +DF+DLL S K+ITASS WED KPLFE+SQEYRSI
Sbjct: 782  LVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWEDCKPLFEESQEYRSI 841

Query: 624  GDENIGREIFEEYTALLQ 571
            G+E+ GREIFEEY A LQ
Sbjct: 842  GEESFGREIFEEYIAHLQ 859



 Score = 66.2 bits (160), Expect = 6e-08
 Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
 Frame = -1

Query: 1869 LEEAKKGMAVAGKVN-VTP--LEEKNADE-EPLVYASKLEAKNAFKALLESANVESDWTW 1702
            ++++   +AVA   +  TP  L E  A+E E   +  K   K+A K  L    + S WT+
Sbjct: 702  VKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMK--LSKVTIASTWTF 759

Query: 1701 EQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESK 1522
                  I++D     +  +   K  F E L + K+ E +E + K++R  ++F  +L   K
Sbjct: 760  GDFKAAILDDVGSPNISDVN-LKLVFEELLDRIKEKEEKEAK-KRQRLADDFNDLLRSKK 817

Query: 1521 DLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDY 1342
            ++T+S+ W     +FE+ + ++++       ++FE Y+  LQ+K +   ++E KR     
Sbjct: 818  EITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQEKAK---EKERKREEEKA 874

Query: 1341 RQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLE 1225
            ++  E  +  K   + RK +DR  + E+     + D  E
Sbjct: 875  KKEKEREEKEKRKEKERKEKDRDREREKGKERSRKDETE 913


>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
            protein 40A isoform 1 [Theobroma cacao]
            gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  738 bits (1906), Expect = 0.0
 Identities = 392/613 (63%), Positives = 456/613 (74%), Gaps = 7/613 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETA-ATQ 2212
            RADASTVWKEFTTPEGRKYYYNKVTKQSKW IPEELKLAREQA+ + SQG   +T  A+Q
Sbjct: 260  RADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGAPSDTGVASQ 319

Query: 2211 DPGATSV-----PAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPLT 2047
             P A +V     PA  +P +S  +                      SG   +P V     
Sbjct: 320  APVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVP-VSQSAA 378

Query: 2046 TNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITT-STFENTYRQDVPNAVDGASAQD 1870
            TNA  V SP V VTP PAV+SG + TP  S     T   + E+T  QD  +  +GASAQD
Sbjct: 379  TNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRSLESTASQDSVHFTNGASAQD 438

Query: 1869 LEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAM 1690
            +EEAKKGMA AGKVNVTP+EEK  D+EPLVYA+K EAKNAFK+LLESANV+SDWTWEQ M
Sbjct: 439  IEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTM 498

Query: 1689 RIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTS 1510
            R IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERR++QK+AREEFTKMLEESK+LTS
Sbjct: 499  REIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTS 558

Query: 1509 STRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFL 1330
            S RWSKA S+FE+DERFKAVERARDREDLFENY++EL++KER  A EE +RNI +YR+FL
Sbjct: 559  SMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFL 618

Query: 1329 ESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXXXX 1150
            ESCDFIK NSQWRKVQDRLEDDERCSRLEKIDRL +FQ+Y                    
Sbjct: 619  ESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEKKKMQKEQLR 678

Query: 1149 RAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDLFED 970
            RAERKNRD FRKLM+EHV  G LTAK +WRDY +KVKD P Y+AV+SNTSGSTPKDLFED
Sbjct: 679  RAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSGSTPKDLFED 738

Query: 969  VAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLVLDX 790
            V EELEKQY +DK+ IKD +K GKI++ STWT+EDFK+A++E+VGS PIS++NLKLV + 
Sbjct: 739  VVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISDINLKLVYEE 798

Query: 789  XXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGDENI 610
                                +DF+ LL++ K+ITASS WED +PLFE+SQEYRSI +E++
Sbjct: 799  LLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESL 858

Query: 609  GREIFEEYTALLQ 571
             REIFEEY A LQ
Sbjct: 859  RREIFEEYIAYLQ 871



 Score = 62.8 bits (151), Expect = 7e-07
 Identities = 46/182 (25%), Positives = 89/182 (48%)
 Frame = -1

Query: 1770 KLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLE 1591
            K   K+A K+     ++ S WT E     I  D     +  +   K  + E L   K+ E
Sbjct: 751  KTHIKDAMKS--GKISMVSTWTVEDFKAAISEDVGSLPISDIN-LKLVYEELLKSAKEKE 807

Query: 1590 AEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENY 1411
             +E + K++R  ++FTK+L   K++T+S+ W  +  +FE+ + ++++     R ++FE Y
Sbjct: 808  EKEAK-KRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEY 866

Query: 1410 LLELQKKERVKAQEEHKRNIMDYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDR 1231
            +  LQ+K +   ++E KR     ++  E  +  K   + RK ++R  + E+     K D 
Sbjct: 867  IAYLQEKAK---EKERKREEEKAKKEKEREEKEKRKEKERKEKEREREREKGKERTKKDE 923

Query: 1230 LE 1225
             +
Sbjct: 924  TD 925


>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
            gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
            40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  732 bits (1890), Expect = 0.0
 Identities = 393/622 (63%), Positives = 457/622 (73%), Gaps = 16/622 (2%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETA-ATQ 2212
            RADASTVWKEFTTPEGRKYYYNKVTKQSKW IPEELKLAREQA+ + SQG   +T  A+Q
Sbjct: 260  RADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGAPSDTGVASQ 319

Query: 2211 DPGATSV-----PAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPLT 2047
             P A +V     PA  +P +S  +                      SG   +P V     
Sbjct: 320  APVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVP-VSQSAA 378

Query: 2046 TNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITT-STFENTYRQDVPNAVDGASAQD 1870
            TNA  V SP V VTP PAV+SG + TP  S     T   + E+T  QD  +  +GASAQD
Sbjct: 379  TNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRSLESTASQDSVHFTNGASAQD 438

Query: 1869 LEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAM 1690
            +EEAKKGMA AGKVNVTP+EEK  D+EPLVYA+K EAKNAFK+LLESANV+SDWTWEQ M
Sbjct: 439  IEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTM 498

Query: 1689 RIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTS 1510
            R IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERR++QK+AREEFTKMLEESK+LTS
Sbjct: 499  REIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTS 558

Query: 1509 STRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFL 1330
            S RWSKA S+FE+DERFKAVERARDREDLFENY++EL++KER  A EE +RNI +YR+FL
Sbjct: 559  SMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFL 618

Query: 1329 ESCDFIKV---------NSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXX 1177
            ESCDFIKV         NSQWRKVQDRLEDDERCSRLEKIDRL +FQ+Y           
Sbjct: 619  ESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEK 678

Query: 1176 XXXXXXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSG 997
                     RAERKNRD FRKLM+EHV  G LTAK +WRDY +KVKD P Y+AV+SNTSG
Sbjct: 679  KKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSG 738

Query: 996  STPKDLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISE 817
            STPKDLFEDV EELEKQY +DK+ IKD +K GKI++ STWT+EDFK+A++E+VGS PIS+
Sbjct: 739  STPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISD 798

Query: 816  VNLKLVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQE 637
            +NLKLV +                     +DF+ LL++ K+ITASS WED +PLFE+SQE
Sbjct: 799  INLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQE 858

Query: 636  YRSIGDENIGREIFEEYTALLQ 571
            YRSI +E++ REIFEEY A LQ
Sbjct: 859  YRSIAEESLRREIFEEYIAYLQ 880



 Score = 62.4 bits (150), Expect = 9e-07
 Identities = 36/143 (25%), Positives = 74/143 (51%)
 Frame = -1

Query: 1770 KLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLE 1591
            K   K+A K+     ++ S WT E     I  D     +  +   K  + E L   K+ E
Sbjct: 760  KTHIKDAMKS--GKISMVSTWTVEDFKAAISEDVGSLPISDIN-LKLVYEELLKSAKEKE 816

Query: 1590 AEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENY 1411
             +E + K++R  ++FTK+L   K++T+S+ W  +  +FE+ + ++++     R ++FE Y
Sbjct: 817  EKEAK-KRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEY 875

Query: 1410 LLELQKKERVKAQEEHKRNIMDY 1342
            +  LQ+K + K ++  +  + ++
Sbjct: 876  IAYLQEKAKEKERKREEEKVCEF 898


>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
            gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
            40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  732 bits (1890), Expect = 0.0
 Identities = 393/622 (63%), Positives = 457/622 (73%), Gaps = 16/622 (2%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETA-ATQ 2212
            RADASTVWKEFTTPEGRKYYYNKVTKQSKW IPEELKLAREQA+ + SQG   +T  A+Q
Sbjct: 260  RADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGAPSDTGVASQ 319

Query: 2211 DPGATSV-----PAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPLT 2047
             P A +V     PA  +P +S  +                      SG   +P V     
Sbjct: 320  APVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVP-VSQSAA 378

Query: 2046 TNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITT-STFENTYRQDVPNAVDGASAQD 1870
            TNA  V SP V VTP PAV+SG + TP  S     T   + E+T  QD  +  +GASAQD
Sbjct: 379  TNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRSLESTASQDSVHFTNGASAQD 438

Query: 1869 LEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAM 1690
            +EEAKKGMA AGKVNVTP+EEK  D+EPLVYA+K EAKNAFK+LLESANV+SDWTWEQ M
Sbjct: 439  IEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTM 498

Query: 1689 RIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTS 1510
            R IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERR++QK+AREEFTKMLEESK+LTS
Sbjct: 499  REIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTS 558

Query: 1509 STRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFL 1330
            S RWSKA S+FE+DERFKAVERARDREDLFENY++EL++KER  A EE +RNI +YR+FL
Sbjct: 559  SMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFL 618

Query: 1329 ESCDFIKV---------NSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXX 1177
            ESCDFIKV         NSQWRKVQDRLEDDERCSRLEKIDRL +FQ+Y           
Sbjct: 619  ESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEK 678

Query: 1176 XXXXXXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSG 997
                     RAERKNRD FRKLM+EHV  G LTAK +WRDY +KVKD P Y+AV+SNTSG
Sbjct: 679  KKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSG 738

Query: 996  STPKDLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISE 817
            STPKDLFEDV EELEKQY +DK+ IKD +K GKI++ STWT+EDFK+A++E+VGS PIS+
Sbjct: 739  STPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISD 798

Query: 816  VNLKLVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQE 637
            +NLKLV +                     +DF+ LL++ K+ITASS WED +PLFE+SQE
Sbjct: 799  INLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQE 858

Query: 636  YRSIGDENIGREIFEEYTALLQ 571
            YRSI +E++ REIFEEY A LQ
Sbjct: 859  YRSIAEESLRREIFEEYIAYLQ 880



 Score = 62.8 bits (151), Expect = 7e-07
 Identities = 46/182 (25%), Positives = 89/182 (48%)
 Frame = -1

Query: 1770 KLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLE 1591
            K   K+A K+     ++ S WT E     I  D     +  +   K  + E L   K+ E
Sbjct: 760  KTHIKDAMKS--GKISMVSTWTVEDFKAAISEDVGSLPISDIN-LKLVYEELLKSAKEKE 816

Query: 1590 AEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENY 1411
             +E + K++R  ++FTK+L   K++T+S+ W  +  +FE+ + ++++     R ++FE Y
Sbjct: 817  EKEAK-KRQRLADDFTKLLHTYKEITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEY 875

Query: 1410 LLELQKKERVKAQEEHKRNIMDYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDR 1231
            +  LQ+K +   ++E KR     ++  E  +  K   + RK ++R  + E+     K D 
Sbjct: 876  IAYLQEKAK---EKERKREEEKAKKEKEREEKEKRKEKERKEKEREREREKGKERTKKDE 932

Query: 1230 LE 1225
             +
Sbjct: 933  TD 934


>ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
            gi|462423966|gb|EMJ28229.1| hypothetical protein
            PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  723 bits (1865), Expect = 0.0
 Identities = 382/616 (62%), Positives = 451/616 (73%), Gaps = 10/616 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETAATQD 2209
            RADASTVWKE+T+ +G+KYYYNKVT++SKW IPEELKLAREQA++ ++QGT  E   T  
Sbjct: 259  RADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQAQRELAQGTRSEMNLTSH 318

Query: 2208 -PGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPLTTNA-- 2038
             P A +     + S+S   +                     S P  I    S + + A  
Sbjct: 319  APPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFSNPSPIAPTGSSVASGAQS 378

Query: 2037 -----VGVHSPVVNVTPSPAVASGDTGTPGASAPPAIT--TSTFENTYRQDVPNAVDGAS 1879
                 VG+  PVV VTP PA  SG TG P  +   AIT   STFEN   QD+ +A DGA 
Sbjct: 379  SITGGVGIQPPVVTVTPPPASVSGSTGVP-PTLVNAITKSVSTFENVTSQDIGSADDGAF 437

Query: 1878 AQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWE 1699
             QD+EEAK+GMAVAGKVNVTP EEK  DEEPLVYASK EAKNAFKALLESANV SDWTWE
Sbjct: 438  TQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYASKQEAKNAFKALLESANVHSDWTWE 497

Query: 1698 QAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKD 1519
            Q MR IINDKRYGALKTLGERKQAFNEYLGQRKKLE EERR++QK+AREEF+KMLEESK+
Sbjct: 498  QTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERRMRQKKAREEFSKMLEESKE 557

Query: 1518 LTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYR 1339
            L S+TRWSKA+SMFE+DERFKAVERARDREDL+E+Y++EL++KE+ KA E+HK+NI +YR
Sbjct: 558  LMSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELERKEKEKAAEDHKQNIAEYR 617

Query: 1338 QFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXX 1159
            +FLESCDFIKVNSQWRKVQDRLEDDERC RLEK+DRL IFQ+Y                 
Sbjct: 618  KFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKE 677

Query: 1158 XXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDL 979
               R ERKNRDEFRKLMEEHVA G LTAK +WRDY +KVKD  +Y AV+SNTSGSTPK+L
Sbjct: 678  QLRRVERKNRDEFRKLMEEHVADGTLTAKTYWRDYCMKVKDLSSYEAVASNTSGSTPKEL 737

Query: 978  FEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLV 799
            FEDVAEELEKQYHEDK+RIKD +KLGK+T++ST T E+FK A+ E++G P IS++N KLV
Sbjct: 738  FEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFEEFKVAILEDIGFPSISDINFKLV 797

Query: 798  LDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGD 619
             +                     +DF+ LL++ K+ITASS WED K LFE++QEYRSIG+
Sbjct: 798  YEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITASSNWEDCKHLFEETQEYRSIGE 857

Query: 618  ENIGREIFEEYTALLQ 571
            EN  RE+FEEY   LQ
Sbjct: 858  ENFSREVFEEYITNLQ 873



 Score = 63.9 bits (154), Expect = 3e-07
 Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
 Frame = -1

Query: 1821 TPLE--EKNADE-EPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALK 1651
            TP E  E  A+E E   +  K   K+A K  L    + S  T+E+    I+ D  + ++ 
Sbjct: 733  TPKELFEDVAEELEKQYHEDKARIKDAMK--LGKVTLASTLTFEEFKVAILEDIGFPSIS 790

Query: 1650 TLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFED 1471
             +   K  + E L + K+ E +E + K++R  ++F K+L   K++T+S+ W     +FE+
Sbjct: 791  DINF-KLVYEELLERAKEKEEKEAK-KRQRLGDDFNKLLHTFKEITASSNWEDCKHLFEE 848

Query: 1470 DERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFLESCDFIKVNSQWR 1291
             + ++++       ++FE Y+  LQ+K +   ++E KR     ++  E  +  K   + R
Sbjct: 849  TQEYRSIGEENFSREVFEEYITNLQEKAK---EKERKREEEKAKKEREREEKEKRKDKER 905

Query: 1290 KVQDRLEDDERCSRLEKIDRLE 1225
            K ++R  + E+     K D  +
Sbjct: 906  KEKEREREKEKGKERSKKDETD 927


>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
          Length = 994

 Score =  720 bits (1858), Expect = 0.0
 Identities = 374/614 (60%), Positives = 447/614 (72%), Gaps = 8/614 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETA-ATQ 2212
            RADASTVWKE+++P+GRKYYYNKVTKQSKW IPEELKLAREQA+K  SQG   ET  A+ 
Sbjct: 221  RADASTVWKEYSSPDGRKYYYNKVTKQSKWTIPEELKLAREQAQKESSQGMQSETGLASH 280

Query: 2211 DP---GATSVPAVEVPSTSA---IATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPL 2050
             P   G++ +P+   P  S    +AT                         S        
Sbjct: 281  GPVAVGSSEMPSAGTPVASGAPLVATGVASSPVAVTPVASLPNSSMTISGSSATPGSQSA 340

Query: 2049 TTNAVGVHSPVVNVTPSPAVASGDTG-TPGASAPPAITTSTFENTYRQDVPNAVDGASAQ 1873
              +AV V  P+V VTP     SG TG +P           T++N   QD+ ++VDGAS  
Sbjct: 341  VASAVAVQPPMVTVTPLNPAISGSTGVSPALGNANTTPVRTYDNRVSQDIASSVDGASIL 400

Query: 1872 DLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQA 1693
            D+EEAKKGMAVAGK+NVTP+EEK  D+EPLV+A+K EAKNAFK+LLESANV+SDWTWEQA
Sbjct: 401  DIEEAKKGMAVAGKINVTPVEEKPVDDEPLVFANKQEAKNAFKSLLESANVQSDWTWEQA 460

Query: 1692 MRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLT 1513
            MR IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERR++QK+AREEFT MLEESK+LT
Sbjct: 461  MREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTIMLEESKELT 520

Query: 1512 SSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQF 1333
            SSTRWSKA+SMFE+DERFKAVERARDREDLFE+Y++EL++KE+ KA EEH+RN  +YR+F
Sbjct: 521  SSTRWSKAVSMFENDERFKAVERARDREDLFESYIVELERKEKEKAAEEHRRNAAEYRKF 580

Query: 1332 LESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXXX 1153
            LESCDFIKVNSQWRKVQ RLEDDERC RLEK+DRL IFQ+Y                   
Sbjct: 581  LESCDFIKVNSQWRKVQVRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQL 640

Query: 1152 XRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDLFE 973
             R ERKNRDEFRKLMEEH+ A  LTAK  WRDY +KVKD P Y AV+SNTSGSTPKDLFE
Sbjct: 641  RRVERKNRDEFRKLMEEHIDAAALTAKTPWRDYCLKVKDLPQYEAVASNTSGSTPKDLFE 700

Query: 972  DVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLVLD 793
            DV EELEKQYH+DK+R+KDT+KLGK++  S+WT +DFK+A+ E++GSPPI E+NLKLV +
Sbjct: 701  DVTEELEKQYHDDKARVKDTLKLGKVSFESSWTFDDFKAAILEDIGSPPILEINLKLVYE 760

Query: 792  XXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGDEN 613
                                 +DF+ LL+S K+IT +S WED + LFE+ QEYR+IG+E+
Sbjct: 761  ELLERAKEKEEKETKKRQRLADDFTKLLHSKKEITTTSNWEDCRQLFEECQEYRAIGEES 820

Query: 612  IGREIFEEYTALLQ 571
            + R+IFEEY   LQ
Sbjct: 821  VTRDIFEEYITHLQ 834



 Score = 68.9 bits (167), Expect = 1e-08
 Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
 Frame = -1

Query: 1812 EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERK 1633
            E+   + E   +  K   K+  K  L   + ES WT++     I+ D   G+   L    
Sbjct: 700  EDVTEELEKQYHDDKARVKDTLK--LGKVSFESSWTFDDFKAAILED--IGSPPILEINL 755

Query: 1632 QAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKA 1453
            +   E L +R K + E+   K++R  ++FTK+L   K++T+++ W     +FE+ + ++A
Sbjct: 756  KLVYEELLERAKEKEEKETKKRQRLADDFTKLLHSKKEITTTSNWEDCRQLFEECQEYRA 815

Query: 1452 VERARDREDLFENYLLELQK--KERVKAQEEHK 1360
            +       D+FE Y+  LQ+  KE+ + +EE K
Sbjct: 816  IGEESVTRDIFEEYITHLQEKAKEKERKREEEK 848


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score =  701 bits (1810), Expect = 0.0
 Identities = 367/614 (59%), Positives = 446/614 (72%), Gaps = 8/614 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPET-AATQ 2212
            RADASTVWKEFTT EG+KYYYNKVTKQSKW IPEELK+AREQA++ + QG   ET AA+ 
Sbjct: 235  RADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTVGQGNQSETDAASN 294

Query: 2211 DPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSI----PAVP--SPL 2050
             P A +V + E  ST+A++                      + P  +    PA+P     
Sbjct: 295  VPTAVAVTSSET-STTAVSVSSSSVMLPGVSSSPISVTAVANPPPVVVSGSPALPVAHST 353

Query: 2049 TTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITT-STFENTYRQDVPNAVDGASAQ 1873
            T +AVGV     +VTP P   S  TG P A+     T+ S+ +N   Q   N+VDGAS  
Sbjct: 354  TASAVGVQP---SVTPLPTAVSVGTGAPAAAVDAKTTSLSSIDNLLSQSAANSVDGASMM 410

Query: 1872 DLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQA 1693
            D  E  K     GK N +PLEEK  DEEPLV+A+KLEAKNAFKALLESANV+SDWTWEQ 
Sbjct: 411  DTAEFNKVSMDMGKTNASPLEEKTPDEEPLVFANKLEAKNAFKALLESANVQSDWTWEQT 470

Query: 1692 MRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLT 1513
            MR IINDKRY ALKTLGERKQAFNEYLGQRKKLEAEERR++QK+AREEF KMLEESK+LT
Sbjct: 471  MREIINDKRYAALKTLGERKQAFNEYLGQRKKLEAEERRVRQKKAREEFAKMLEESKELT 530

Query: 1512 SSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQF 1333
            SS +WSKAIS+FE+DER+KA+ERARDREDLF++Y+++L++KE+ KA E+ +RN+ +YR+F
Sbjct: 531  SSMKWSKAISLFENDERYKALERARDREDLFDSYIVDLERKEKEKAAEDRRRNVAEYRKF 590

Query: 1332 LESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXXX 1153
            LESCDFIK +SQWRK+QDRLEDDERC  LEK+DRL IFQ+Y                   
Sbjct: 591  LESCDFIKASSQWRKIQDRLEDDERCLCLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQL 650

Query: 1152 XRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDLFE 973
             RAERKNRDEFRKL+EEHVA+G LTAK HW DY +KVKD P Y AV++NTSGS PKDLFE
Sbjct: 651  RRAERKNRDEFRKLLEEHVASGSLTAKTHWLDYCLKVKDLPPYQAVATNTSGSKPKDLFE 710

Query: 972  DVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLVLD 793
            DV+EELEKQYH+DK+RIKD +KLGKIT+ STWT EDFK AV +++GSPPIS++NLKL+ +
Sbjct: 711  DVSEELEKQYHDDKTRIKDAMKLGKITMVSTWTFEDFKGAVADDIGSPPISDINLKLLYE 770

Query: 792  XXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGDEN 613
                                 +DF+ LLY++K++T SS WED KPLFE+SQEYRSIG+E+
Sbjct: 771  ELVERAKEKEEKEAKKQQRLADDFTKLLYTLKEVTPSSNWEDCKPLFEESQEYRSIGEES 830

Query: 612  IGREIFEEYTALLQ 571
            + +EIFEEY   LQ
Sbjct: 831  LSKEIFEEYVTHLQ 844



 Score = 65.9 bits (159), Expect = 8e-08
 Identities = 47/185 (25%), Positives = 91/185 (49%)
 Frame = -1

Query: 1812 EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERK 1633
            E+ + + E   +  K   K+A K  L    + S WT+E     + +D   G+        
Sbjct: 710  EDVSEELEKQYHDDKTRIKDAMK--LGKITMVSTWTFEDFKGAVADD--IGSPPISDINL 765

Query: 1632 QAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKA 1453
            +   E L +R K + E+   KQ+R  ++FTK+L   K++T S+ W     +FE+ + +++
Sbjct: 766  KLLYEELVERAKEKEEKEAKKQQRLADDFTKLLYTLKEVTPSSNWEDCKPLFEESQEYRS 825

Query: 1452 VERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFLESCDFIKVNSQWRKVQDRL 1273
            +      +++FE Y+  LQ+K +   ++E KR     R+  E  +  K   + RK +++ 
Sbjct: 826  IGEESLSKEIFEEYVTHLQEKAK---EKERKREEEKARKEKEREEKDKRKEKERKEKEKE 882

Query: 1272 EDDER 1258
            ++ ER
Sbjct: 883  KEKER 887


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  701 bits (1809), Expect = 0.0
 Identities = 368/619 (59%), Positives = 445/619 (71%), Gaps = 13/619 (2%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTL-------- 2233
            RADASTVWKEFT P+GRKYYYNKVTK+SKW +PEELKLAREQA+K  +QGT         
Sbjct: 219  RADASTVWKEFTAPDGRKYYYNKVTKESKWTMPEELKLAREQAQKEATQGTQTDISVMAP 278

Query: 2232 -PETAA----TQDPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIP 2068
             P  AA     + P  +SV +   P+ S +AT                      G  +I 
Sbjct: 279  QPTLAAGLSHAETPAISSVNSSISPTVSGVATSPVPVTPFVSVSNSPSVMVT--GSSAIT 336

Query: 2067 AVPSPLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVD 1888
              P   TT+  G       V+     ASG TG P      A + + FE+   QDV N VD
Sbjct: 337  GTPIASTTSVSGT------VSSQSVAASGGTGPPAVVHANASSVTPFESLASQDVKNTVD 390

Query: 1887 GASAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDW 1708
            G S +D+EEA+KGMAVAGKVN T LEEK+AD+EPLV+A+K EAKNAFKALLES NV+SDW
Sbjct: 391  GTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANKQEAKNAFKALLESVNVQSDW 450

Query: 1707 TWEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEE 1528
            TWEQAMR IINDKRYGALKTLGERKQAF+EYLG RKKL+AEERRI+QK+AREEFTKMLEE
Sbjct: 451  TWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFTKMLEE 510

Query: 1527 SKDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIM 1348
            SK+LTSSTRWSKA+SMFE+DERFKAVER+RDREDLFE+Y++EL++KE+ +A EEHK+NI 
Sbjct: 511  SKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFESYIVELERKEKERAAEEHKKNIA 570

Query: 1347 DYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXX 1168
            +YR+FLESCD+IKV+SQWRKVQDRLEDDERCSRLEK+DRL IFQ+Y              
Sbjct: 571  EYRKFLESCDYIKVSSQWRKVQDRLEDDERCSRLEKLDRLLIFQDYIRDLEKEEEDQKKI 630

Query: 1167 XXXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTP 988
                  R ERKNRDEFRKLMEEH+AAG+ TAK  WRDY +KVK+ P Y AV+SNTSGSTP
Sbjct: 631  QKERVRRIERKNRDEFRKLMEEHIAAGVFTAKTFWRDYCLKVKELPQYQAVASNTSGSTP 690

Query: 987  KDLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNL 808
            KDLFEDV E+LE +YHE+K++IKD +K  KIT++S+WT +DFK+A+ EE GS  +S++N 
Sbjct: 691  KDLFEDVLEDLENKYHEEKTQIKDVVKAAKITITSSWTFDDFKAAI-EESGSLAVSDINF 749

Query: 807  KLVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRS 628
            KLV +                     +DFS LL S+K+IT SS WED K LFE+S+EYRS
Sbjct: 750  KLVYEDLLERAKEKEEKEAKRRQRLADDFSGLLQSLKEITTSSNWEDSKQLFEESEEYRS 809

Query: 627  IGDENIGREIFEEYTALLQ 571
            IG+E+  +E+FEE+   LQ
Sbjct: 810  IGEESFAKEVFEEHITHLQ 828



 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 43/185 (23%), Positives = 91/185 (49%)
 Frame = -1

Query: 1812 EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERK 1633
            E+   D E   +  K + K+  KA      + S WT++     I   +  G+L       
Sbjct: 695  EDVLEDLENKYHEEKTQIKDVVKAA--KITITSSWTFDDFKAAI---EESGSLAVSDINF 749

Query: 1632 QAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKA 1453
            +   E L +R K + E+   +++R  ++F+ +L+  K++T+S+ W  +  +FE+ E +++
Sbjct: 750  KLVYEDLLERAKEKEEKEAKRRQRLADDFSGLLQSLKEITTSSNWEDSKQLFEESEEYRS 809

Query: 1452 VERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFLESCDFIKVNSQWRKVQDRL 1273
            +      +++FE ++  LQ+K +   ++E KR     ++  E  +  K   + RK +DR 
Sbjct: 810  IGEESFAKEVFEEHITHLQEKAK---EKERKREEEKAKKEKEREEKEKRKEKERKEKDRE 866

Query: 1272 EDDER 1258
             + E+
Sbjct: 867  REKEK 871


>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
            gi|548831471|gb|ERM94279.1| hypothetical protein
            AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  695 bits (1793), Expect = 0.0
 Identities = 374/610 (61%), Positives = 439/610 (71%), Gaps = 4/610 (0%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPET---AA 2218
            RADASTVWKEFTTPEGRKYYYNKVTKQSKW IP+ELKLAREQAEK  +Q T  ET    A
Sbjct: 249  RADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPDELKLAREQAEKNGTQLTNSETTDVVA 308

Query: 2217 TQDPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPLTTNA 2038
            +  P   +VP  E+PST A  +                        QS     S + T+ 
Sbjct: 309  SSTPVTVTVPLTEMPSTVAAIS----------------------ATQSAMPSTSGMATSP 346

Query: 2037 VGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDGASAQDLEEA 1858
            V V +PVV+V P+ AV   D  + GA    A      +N   + +    D  SAQDLEEA
Sbjct: 347  VLV-TPVVSV-PAAAV---DPSSAGA----AYEKIKVDNVSPESIAQVADETSAQDLEEA 397

Query: 1857 KKGMAVAGKVNVTPL-EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRII 1681
            +K M VAGKVN+TP  +EK  DEEPLV+ASK EAKNAFK LL SA+VESDWTW+QAMR+I
Sbjct: 398  RKAMPVAGKVNITPTSDEKTVDEEPLVFASKQEAKNAFKELLVSAHVESDWTWDQAMRVI 457

Query: 1680 INDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTR 1501
            INDKRYGALKTLGERKQAFNEYLGQRKKLEAEE+R +QK+ARE+F KMLEESK+LTS+T+
Sbjct: 458  INDKRYGALKTLGERKQAFNEYLGQRKKLEAEEKRTRQKKAREDFVKMLEESKELTSATK 517

Query: 1500 WSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFLESC 1321
            WSKAI+MFEDDERF+AVER RDRE+LFE +L EL +KER KAQEEH+RN+ +YR FLESC
Sbjct: 518  WSKAITMFEDDERFRAVERGRDREELFEMHLEELHRKERAKAQEEHRRNVQEYRAFLESC 577

Query: 1320 DFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXXXXRAE 1141
            DFIK +SQWRKVQDRLEDDERC+RLEKIDRLEIFQEY                    RAE
Sbjct: 578  DFIKASSQWRKVQDRLEDDERCARLEKIDRLEIFQEYIRDLEKEEEEQRKLQKEHLRRAE 637

Query: 1140 RKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDLFEDVAE 961
            RKNRD+FRKLME H+AAGILTAK HWR+Y +KVKD PAY+AVSSNTSGSTPKDLFED AE
Sbjct: 638  RKNRDDFRKLMEGHIAAGILTAKTHWREYCMKVKDLPAYLAVSSNTSGSTPKDLFEDTAE 697

Query: 960  ELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLVLDXXXX 781
            EL+KQY ED++RIKD +K+ +  ++STW+ E+FK A++E+     ISE NLKLV D    
Sbjct: 698  ELDKQYQEDRTRIKDAVKMARFVMTSTWSFENFKEAISEDNNLKSISETNLKLVFDELLE 757

Query: 780  XXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGDENIGRE 601
                             +D  DLLYSIKDI+ASS+WE+ KPL E++Q YRSI DE+  R+
Sbjct: 758  RLKEKEEKEAKKRQRMADDLKDLLYSIKDISASSRWEECKPLLEENQAYRSINDESFARQ 817

Query: 600  IFEEYTALLQ 571
            IFEEY A LQ
Sbjct: 818  IFEEYVAYLQ 827



 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 43/175 (24%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
 Frame = -1

Query: 1716 SDWTWEQAMRIIINDKRYGALKTLGER--KQAFNEYLGQRKKLEAEERRIKQKRAREEFT 1543
            S W++E     I  D     LK++ E   K  F+E L + K+ E +E + K++R  ++  
Sbjct: 723  STWSFENFKEAISEDNN---LKSISETNLKLVFDELLERLKEKEEKEAK-KRQRMADDLK 778

Query: 1542 KMLEESKDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEH 1363
             +L   KD+++S+RW +   + E+++ ++++        +FE Y+  LQ+K +   ++E 
Sbjct: 779  DLLYSIKDISASSRWEECKPLLEENQAYRSINDESFARQIFEEYVAYLQEKIK---EKER 835

Query: 1362 KRNIMDYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEK----IDRLEIFQEY 1210
            KR     R+  E  +  K   + RK ++R  D E+  R  +    ++ L++  ++
Sbjct: 836  KREEEKARKEKEREEKEKRKEKERKEKERDRDREKKDRARRDEMDVENLDVINDF 890


>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
            subsp. vesca]
          Length = 990

 Score =  690 bits (1780), Expect = 0.0
 Identities = 369/615 (60%), Positives = 443/615 (72%), Gaps = 10/615 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPE-TAATQ 2212
            RADASTVWKE+T+ +G+KYYYNKVT++SKW IPEELKLAREQA++  +QGT  E T+ + 
Sbjct: 220  RADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKLAREQAQREHTQGTQSEMTSTSH 279

Query: 2211 DPGATSVPAVEV------PSTSAI--ATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPS 2056
             P AT+   +        PSTS+    T                     SG    P V S
Sbjct: 280  APPATASAEIHAGASSVGPSTSSAQPGTVSSPVAVTPISAFSNPSPTTPSGLSVAPGVQS 339

Query: 2055 PLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDGASA 1876
             + T +VGV   VVNV+P PA   G TG P ++    IT S  EN   QD  +++DGAS+
Sbjct: 340  SMATGSVGVQPAVVNVSPLPASNVGSTGLP-STLVNTITKSVNENQAPQDSASSIDGASS 398

Query: 1875 QDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQ 1696
            QD+EEAKKGMAVAGKVNVTP EEK  D+EPLVYASK EAKNAFK+LLESANV SDWTWEQ
Sbjct: 399  QDIEEAKKGMAVAGKVNVTPSEEKAIDDEPLVYASKQEAKNAFKSLLESANVHSDWTWEQ 458

Query: 1695 AMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDL 1516
            AMR IINDKRYGAL+TLGERKQAFNEYLGQRKKLE EERRI+QKRAREEFTKMLEESK+L
Sbjct: 459  AMREIINDKRYGALRTLGERKQAFNEYLGQRKKLENEERRIRQKRAREEFTKMLEESKEL 518

Query: 1515 TSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQ 1336
            TS+ RWSKA++MFE+DERFKAVERARDREDL+E+Y++EL++KE+  A EEH+RNI +Y++
Sbjct: 519  TSTIRWSKAVTMFENDERFKAVERARDREDLYESYIVELERKEKEIAAEEHRRNISEYKE 578

Query: 1335 FLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXX 1156
            FLESCDFIK    WRKVQDRLEDDERC RL+K DRL IFQ++                  
Sbjct: 579  FLESCDFIK----WRKVQDRLEDDERCLRLDKFDRLLIFQDHIRDLEKEEEEQKKIQKEQ 634

Query: 1155 XXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSG-STPKDL 979
              R ERKNRDEFRK++EEH A G LTAK  WRDY +KVKD P Y AV++NT G STPKDL
Sbjct: 635  LRRIERKNRDEFRKILEEHAADGTLTAKTQWRDYCMKVKDLPQYEAVAANTHGSSTPKDL 694

Query: 978  FEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLV 799
            FEDVAE+LEKQ+ EDK+R+KD +K G+IT+ S+WT E+FK+AV  ++G P ISE+NLKL 
Sbjct: 695  FEDVAEDLEKQFVEDKARVKDAMKQGQITMVSSWTFEEFKAAVVNDIGFPSISELNLKLA 754

Query: 798  LDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGD 619
             +                     +DF  LL++ K+IT SS WED K LFE++QEYRS+GD
Sbjct: 755  YEDILERAREKEEKEAKKRLRIADDFHKLLHTFKEITVSSSWEDCKQLFEETQEYRSVGD 814

Query: 618  ENIGREIFEEYTALL 574
            E+ GREIFEEY   L
Sbjct: 815  EDFGREIFEEYITSL 829



 Score = 66.2 bits (160), Expect = 6e-08
 Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
 Frame = -1

Query: 1812 EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERK 1633
            E+   D E      K   K+A K       + S WT+E+    ++ND  + ++  L   K
Sbjct: 696  EDVAEDLEKQFVEDKARVKDAMKQ--GQITMVSSWTFEEFKAAVVNDIGFPSISELN-LK 752

Query: 1632 QAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKA 1453
             A+ + L + ++ E +E + K+ R  ++F K+L   K++T S+ W     +FE+ + +++
Sbjct: 753  LAYEDILERAREKEEKEAK-KRLRIADDFHKLLHTFKEITVSSSWEDCKQLFEETQEYRS 811

Query: 1452 VERARDREDLFENYLLELQK--KERVKAQEEHKRNIMDYRQFLESCDFIKVNSQWRKVQD 1279
            V       ++FE Y+  L +  KE+ + +EE K      R+  E     K   + RK +D
Sbjct: 812  VGDEDFGREIFEEYITSLHERAKEKERKREEEKAKKEKEREEKE-----KRKDKERKEKD 866

Query: 1278 RLEDDERCSRLEKIDRLE 1225
            R  + E+     K D  +
Sbjct: 867  REREKEKGKERSKKDETD 884


>ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cicer arietinum]
          Length = 1000

 Score =  682 bits (1759), Expect = 0.0
 Identities = 363/611 (59%), Positives = 433/611 (70%), Gaps = 5/611 (0%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETAATQD 2209
            RADASTVWKEFT+ +GRKYYYNKVT+QS W IPEELKLARE A K +SQGT+ ET+ T +
Sbjct: 231  RADASTVWKEFTSSDGRKYYYNKVTQQSTWTIPEELKLAREHAHKTISQGTVSETSDTSN 290

Query: 2208 PG---ATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVP-SPLTTN 2041
                 A +  A    S +A+ +                         S  +V  S +T++
Sbjct: 291  AAGSFAATPTAANADSFNALTSNGLASSPSSITPIAATDHQQLFSGLSGTSVSHSVVTSS 350

Query: 2040 AVGVH-SPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDGASAQDLE 1864
            A GV  SPVV V+ +P   +G +G    S    I  S  EN   QD   +V+GA  QDLE
Sbjct: 351  ATGVEPSPVVTVSTAPTTVAGSSGVAANSLDSKIP-SIVENLATQDSTTSVNGAPLQDLE 409

Query: 1863 EAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRI 1684
            EAK+G+ V GK NVTP EEK  D E LVYA+KLEAKNAFKALLES +V+SDWTWEQAMR 
Sbjct: 410  EAKRGLPVVGKTNVTPSEEKTNDGETLVYANKLEAKNAFKALLESVSVQSDWTWEQAMRE 469

Query: 1683 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSST 1504
            I+NDKRY ALKTLGERKQAFNEYLGQRKKLEAEERRIKQK+AREEFTKMLEE K+LTSST
Sbjct: 470  IVNDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSST 529

Query: 1503 RWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFLES 1324
            RWSKAISM E DERF AVER RDREDLFE+Y++EL++KE+  A EEH+RN+ +YR+FL+S
Sbjct: 530  RWSKAISMLESDERFSAVERPRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLQS 589

Query: 1323 CDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXXXXRA 1144
            CD++KVNS WRK+QDRLEDD+R  +LEKIDRL +FQ+Y                    R 
Sbjct: 590  CDYVKVNSHWRKIQDRLEDDDRYLQLEKIDRLLVFQDYIRDLEKEEEEQKKIQKERLRRG 649

Query: 1143 ERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDLFEDVA 964
            ERKNRD FRKL+EEHVA G+LTAK  WRDY +KVK+ P Y AV+SNTSGSTPKDLFEDV 
Sbjct: 650  ERKNRDAFRKLLEEHVADGVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVF 709

Query: 963  EELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLVLDXXX 784
            E+LEKQYHEDKS IKDT+K GKITV +T   EDFKS V EE     ISE+NLKL+ +   
Sbjct: 710  EDLEKQYHEDKSLIKDTLKSGKITVVTTSVFEDFKSVVLEEAACQKISEINLKLLYEELL 769

Query: 783  XXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGDENIGR 604
                              +DF+++LY++KDIT +S+WED KPLFE++QEYRSIGDE+  R
Sbjct: 770  ERAKEKEEKEAKKRQRLADDFTNVLYTLKDITTTSEWEDCKPLFEETQEYRSIGDESYSR 829

Query: 603  EIFEEYTALLQ 571
            EIFEEY   L+
Sbjct: 830  EIFEEYITYLK 840


>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
            tuberosum]
          Length = 864

 Score =  681 bits (1756), Expect = 0.0
 Identities = 365/617 (59%), Positives = 434/617 (70%), Gaps = 11/617 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAE----KIMSQGT----- 2236
            RADASTVWKEFTT +GRKYYYNK TKQSKW IP+ELKLARE AE    +++  GT     
Sbjct: 232  RADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSG 291

Query: 2235 --LPETAATQDPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAV 2062
              + E     +  +   P    PS++                         SG  +IP+V
Sbjct: 292  VQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAVSDVNTPPLVVSGSSAIPSV 351

Query: 2061 PSPLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDGA 1882
               +T++A GV SP V         SG T +   +       S  EN   Q V +++ GA
Sbjct: 352  SLAVTSSA-GVSSPAV---------SGSTESAALANAYQTQMSGIENLSPQ-VASSLSGA 400

Query: 1881 SAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTW 1702
            S+QD+EEAKKGMAVAGK+NV P EEK+ADEEP +YA+K EAKNAFKALLESANVESDWTW
Sbjct: 401  SSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLESANVESDWTW 460

Query: 1701 EQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESK 1522
            EQ MR+IINDKRYGALKTLGERKQAFNEYL QRKK EAEERR++Q++A+EEFTKMLEESK
Sbjct: 461  EQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKMLEESK 520

Query: 1521 DLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDY 1342
            +LTSSTRWSKA++MFEDDERFKAVER  DREDLF NYL++LQKKER KAQEE++RN ++Y
Sbjct: 521  ELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRNRLEY 580

Query: 1341 RQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXX 1162
            +QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRLEIFQEY                
Sbjct: 581  KQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQRKLQK 640

Query: 1161 XXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKD 982
                RAERKNRD FRK++EEH+AAG+LTAK  WRDY   VK+  AY AV+SNTSGSTPKD
Sbjct: 641  EQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGSTPKD 700

Query: 981  LFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKL 802
            LFEDV EELEKQYHEDK R+KD +K  KIT+SSTWT EDFK A+ E +GSP I +VNL+L
Sbjct: 701  LFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDVNLQL 760

Query: 801  VLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIG 622
            + +                     +DF+D L SIK+IT SS WE+ K L EDS E+R+IG
Sbjct: 761  IFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRAIG 820

Query: 621  DENIGREIFEEYTALLQ 571
            +E I R +FEEY A LQ
Sbjct: 821  EETISRAVFEEYVAWLQ 837



 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 39/156 (25%), Positives = 70/156 (44%)
 Frame = -1

Query: 1812 EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERK 1633
            E+   + E   +  K+  K+  K+  E   + S WT+E     I      G+        
Sbjct: 703  EDVTEELEKQYHEDKIRVKDVVKS--EKITISSTWTFEDFKVAIFEG--IGSPSIHDVNL 758

Query: 1632 QAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKA 1453
            Q   E L +R K + E+   K +R  ++FT  L   K++T S+ W ++  + ED   F+A
Sbjct: 759  QLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRA 818

Query: 1452 VERARDREDLFENYLLELQKKERVKAQEEHKRNIMD 1345
            +        +FE Y+  LQ+K + K ++  +  + D
Sbjct: 819  IGEETISRAVFEEYVAWLQEKAKEKERKREEEKLFD 854


>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 872

 Score =  681 bits (1756), Expect = 0.0
 Identities = 365/617 (59%), Positives = 434/617 (70%), Gaps = 11/617 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAE----KIMSQGT----- 2236
            RADASTVWKEFTT +GRKYYYNK TKQSKW IP+ELKLARE AE    +++  GT     
Sbjct: 232  RADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSG 291

Query: 2235 --LPETAATQDPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAV 2062
              + E     +  +   P    PS++                         SG  +IP+V
Sbjct: 292  VQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAVSDVNTPPLVVSGSSAIPSV 351

Query: 2061 PSPLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDGA 1882
               +T++A GV SP V         SG T +   +       S  EN   Q V +++ GA
Sbjct: 352  SLAVTSSA-GVSSPAV---------SGSTESAALANAYQTQMSGIENLSPQ-VASSLSGA 400

Query: 1881 SAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTW 1702
            S+QD+EEAKKGMAVAGK+NV P EEK+ADEEP +YA+K EAKNAFKALLESANVESDWTW
Sbjct: 401  SSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLESANVESDWTW 460

Query: 1701 EQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESK 1522
            EQ MR+IINDKRYGALKTLGERKQAFNEYL QRKK EAEERR++Q++A+EEFTKMLEESK
Sbjct: 461  EQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKMLEESK 520

Query: 1521 DLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDY 1342
            +LTSSTRWSKA++MFEDDERFKAVER  DREDLF NYL++LQKKER KAQEE++RN ++Y
Sbjct: 521  ELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRNRLEY 580

Query: 1341 RQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXX 1162
            +QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRLEIFQEY                
Sbjct: 581  KQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQRKLQK 640

Query: 1161 XXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKD 982
                RAERKNRD FRK++EEH+AAG+LTAK  WRDY   VK+  AY AV+SNTSGSTPKD
Sbjct: 641  EQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGSTPKD 700

Query: 981  LFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKL 802
            LFEDV EELEKQYHEDK R+KD +K  KIT+SSTWT EDFK A+ E +GSP I +VNL+L
Sbjct: 701  LFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDVNLQL 760

Query: 801  VLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIG 622
            + +                     +DF+D L SIK+IT SS WE+ K L EDS E+R+IG
Sbjct: 761  IFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRAIG 820

Query: 621  DENIGREIFEEYTALLQ 571
            +E I R +FEEY A LQ
Sbjct: 821  EETISRAVFEEYVAWLQ 837



 Score = 62.0 bits (149), Expect = 1e-06
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
 Frame = -1

Query: 1812 EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERK 1633
            E+   + E   +  K+  K+  K+  E   + S WT+E     I      G+        
Sbjct: 703  EDVTEELEKQYHEDKIRVKDVVKS--EKITISSTWTFEDFKVAIFEG--IGSPSIHDVNL 758

Query: 1632 QAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKA 1453
            Q   E L +R K + E+   K +R  ++FT  L   K++T S+ W ++  + ED   F+A
Sbjct: 759  QLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRA 818

Query: 1452 VERARDREDLFENYLLELQK--KERVKAQEEHKRNI 1351
            +        +FE Y+  LQ+  KE+ + +EE K N+
Sbjct: 819  IGEETISRAVFEEYVAWLQEKAKEKERKREEEKENL 854


>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score =  681 bits (1756), Expect = 0.0
 Identities = 365/617 (59%), Positives = 434/617 (70%), Gaps = 11/617 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAE----KIMSQGT----- 2236
            RADASTVWKEFTT +GRKYYYNK TKQSKW IP+ELKLARE AE    +++  GT     
Sbjct: 232  RADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSG 291

Query: 2235 --LPETAATQDPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAV 2062
              + E     +  +   P    PS++                         SG  +IP+V
Sbjct: 292  VQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAVSDVNTPPLVVSGSSAIPSV 351

Query: 2061 PSPLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDGA 1882
               +T++A GV SP V         SG T +   +       S  EN   Q V +++ GA
Sbjct: 352  SLAVTSSA-GVSSPAV---------SGSTESAALANAYQTQMSGIENLSPQ-VASSLSGA 400

Query: 1881 SAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTW 1702
            S+QD+EEAKKGMAVAGK+NV P EEK+ADEEP +YA+K EAKNAFKALLESANVESDWTW
Sbjct: 401  SSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLESANVESDWTW 460

Query: 1701 EQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESK 1522
            EQ MR+IINDKRYGALKTLGERKQAFNEYL QRKK EAEERR++Q++A+EEFTKMLEESK
Sbjct: 461  EQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKMLEESK 520

Query: 1521 DLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDY 1342
            +LTSSTRWSKA++MFEDDERFKAVER  DREDLF NYL++LQKKER KAQEE++RN ++Y
Sbjct: 521  ELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRNRLEY 580

Query: 1341 RQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXX 1162
            +QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRLEIFQEY                
Sbjct: 581  KQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQRKLQK 640

Query: 1161 XXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKD 982
                RAERKNRD FRK++EEH+AAG+LTAK  WRDY   VK+  AY AV+SNTSGSTPKD
Sbjct: 641  EQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGSTPKD 700

Query: 981  LFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKL 802
            LFEDV EELEKQYHEDK R+KD +K  KIT+SSTWT EDFK A+ E +GSP I +VNL+L
Sbjct: 701  LFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDVNLQL 760

Query: 801  VLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIG 622
            + +                     +DF+D L SIK+IT SS WE+ K L EDS E+R+IG
Sbjct: 761  IFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRAIG 820

Query: 621  DENIGREIFEEYTALLQ 571
            +E I R +FEEY A LQ
Sbjct: 821  EETISRAVFEEYVAWLQ 837



 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 46/191 (24%), Positives = 86/191 (45%)
 Frame = -1

Query: 1812 EEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAMRIIINDKRYGALKTLGERK 1633
            E+   + E   +  K+  K+  K+  E   + S WT+E     I      G+        
Sbjct: 703  EDVTEELEKQYHEDKIRVKDVVKS--EKITISSTWTFEDFKVAIFEG--IGSPSIHDVNL 758

Query: 1632 QAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTSSTRWSKAISMFEDDERFKA 1453
            Q   E L +R K + E+   K +R  ++FT  L   K++T S+ W ++  + ED   F+A
Sbjct: 759  QLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRA 818

Query: 1452 VERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFLESCDFIKVNSQWRKVQDRL 1273
            +        +FE Y+  LQ+K +   ++E KR     ++  E  +  K   + R+ +++ 
Sbjct: 819  IGEETISRAVFEEYVAWLQEKAK---EKERKREEEKVKKEKEKDEKEKRKDKERREKEKE 875

Query: 1272 EDDERCSRLEK 1240
            ++ ER    E+
Sbjct: 876  KEKEREKEKER 886


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
            gi|223550756|gb|EEF52242.1| protein binding protein,
            putative [Ricinus communis]
          Length = 970

 Score =  681 bits (1756), Expect = 0.0
 Identities = 356/615 (57%), Positives = 435/615 (70%), Gaps = 9/615 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETAATQD 2209
            RADASTVWKEFTTPEG+KYYYNK+TKQSKW +P+ELKLAREQA++  +QGT  E  A   
Sbjct: 213  RADASTVWKEFTTPEGKKYYYNKITKQSKWSMPDELKLAREQAQQTATQGTKSEADAASH 272

Query: 2208 PGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPLTTNAVGV 2029
               T   +    ST+ I                            + + P P+T   V V
Sbjct: 273  ASVTVNASSGEMSTTVIPVGSGFS-----------------STSGVASSPVPVTP-VVAV 314

Query: 2028 HSPVVNVTPSPA--VASGDTGTPGASAPPAITTST-------FENTYRQDVPNAVDGASA 1876
             +PV  V+ S A  VA           PPA+T +        F+N   +    +VDGAS 
Sbjct: 315  SNPVAAVSSSSALPVAQSIIANAAGVQPPAVTMTVLPAAAGGFDNVASKGAAPSVDGASI 374

Query: 1875 QDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQ 1696
            Q+ EE KKG  V+ K +    EEKN D+EPL +ASK EAKNAFKALLESANV+SDWTWEQ
Sbjct: 375  QNSEEVKKGSGVSIKSDANLTEEKNLDDEPLTFASKQEAKNAFKALLESANVQSDWTWEQ 434

Query: 1695 AMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDL 1516
             MR IINDKRYGALKTLGERKQAFNEYLGQRKK+EAEERR++QKRAREEFTKMLEESK+L
Sbjct: 435  TMREIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKRAREEFTKMLEESKEL 494

Query: 1515 TSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQ 1336
            TSS +WSKA+S+FE+DERFKAVE+ARDREDLF+NY++EL++KER KA E+H+RN+ ++++
Sbjct: 495  TSSMKWSKAVSLFENDERFKAVEKARDREDLFDNYIVELERKEREKAAEDHRRNVTEFKK 554

Query: 1335 FLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXX 1156
            FLESCDFIKVNSQWRKVQDRLEDDERC RLEK+DRL +FQ+Y                  
Sbjct: 555  FLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLVFQDYIRDLEKEEEEQKKIQKEQ 614

Query: 1155 XXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDLF 976
              RAERKNRD FRKL+EEHVA G LTAK HW DY +KVKD P Y AV++NTSGSTPKDLF
Sbjct: 615  LRRAERKNRDGFRKLLEEHVADGSLTAKAHWLDYCLKVKDLPQYHAVATNTSGSTPKDLF 674

Query: 975  EDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLVL 796
            EDVAEELEKQY +DK+R+KD IK GKI ++STW  EDFK+A+ ++V SPP+S++NL+L+ 
Sbjct: 675  EDVAEELEKQYRDDKARVKDAIKSGKIIMTSTWIFEDFKAAILDDVSSPPVSDINLQLIY 734

Query: 795  DXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGDE 616
            D                     +D + LL++ K+I ASS WED +PLFE+SQEYR+IG+E
Sbjct: 735  DELLERAKEKEEKEAKKRQRLADDLTKLLHTYKEIMASSSWEDCRPLFEESQEYRAIGEE 794

Query: 615  NIGREIFEEYTALLQ 571
            ++ +EIFEEY A LQ
Sbjct: 795  SVIKEIFEEYIAHLQ 809


>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
            gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
            40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  671 bits (1730), Expect = 0.0
 Identities = 363/580 (62%), Positives = 421/580 (72%), Gaps = 16/580 (2%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETA-ATQ 2212
            RADASTVWKEFTTPEGRKYYYNKVTKQSKW IPEELKLAREQA+ + SQG   +T  A+Q
Sbjct: 260  RADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGAPSDTGVASQ 319

Query: 2211 DPGATSV-----PAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSPLT 2047
             P A +V     PA  +P +S  +                      SG   +P V     
Sbjct: 320  APVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVANPSPTLVSGSTVVP-VSQSAA 378

Query: 2046 TNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITT-STFENTYRQDVPNAVDGASAQD 1870
            TNA  V SP V VTP PAV+SG + TP  S     T   + E+T  QD  +  +GASAQD
Sbjct: 379  TNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRSLESTASQDSVHFTNGASAQD 438

Query: 1869 LEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQAM 1690
            +EEAKKGMA AGKVNVTP+EEK  D+EPLVYA+K EAKNAFK+LLESANV+SDWTWEQ M
Sbjct: 439  IEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNAFKSLLESANVQSDWTWEQTM 498

Query: 1689 RIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDLTS 1510
            R IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERR++QK+AREEFTKMLEESK+LTS
Sbjct: 499  REIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTS 558

Query: 1509 STRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQFL 1330
            S RWSKA S+FE+DERFKAVERARDREDLFENY++EL++KER  A EE +RNI +YR+FL
Sbjct: 559  SMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERKERENAAEEKRRNIAEYRKFL 618

Query: 1329 ESCDFIKV---------NSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXX 1177
            ESCDFIKV         NSQWRKVQDRLEDDERCSRLEKIDRL +FQ+Y           
Sbjct: 619  ESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIHDLEKEEEEK 678

Query: 1176 XXXXXXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSG 997
                     RAERKNRD FRKLM+EHV  G LTAK +WRDY +KVKD P Y+AV+SNTSG
Sbjct: 679  KKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPYLAVASNTSG 738

Query: 996  STPKDLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISE 817
            STPKDLFEDV EELEKQY +DK+ IKD +K GKI++ STWT+EDFK+A++E+VGS PIS+
Sbjct: 739  STPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISEDVGSLPISD 798

Query: 816  VNLKLVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIK 697
            +NLKLV +                     +DF+ LL++ K
Sbjct: 799  INLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYK 838


>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
            lycopersicum]
          Length = 998

 Score =  669 bits (1725), Expect = 0.0
 Identities = 357/618 (57%), Positives = 433/618 (70%), Gaps = 12/618 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETA---- 2221
            RADASTVWKEFTT +GRKYYYNK TKQSKW +P+ELKLARE AE + SQ     T+    
Sbjct: 232  RADASTVWKEFTTADGRKYYYNKETKQSKWTMPDELKLARELAENVASQVVQTGTSTNSG 291

Query: 2220 --------ATQDPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPA 2065
                    +T+ P A + P    PS++                         SG  +IP 
Sbjct: 292  VQVSEAVTSTEQPSAVT-PVSSTPSSTVSGVPSSPVPVTPAVSDVNTPPLVVSGSSAIPT 350

Query: 2064 VPSPLTTNAVGVHSPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDG 1885
            V   +T++A G+ SP V         SG+T +   +       S  EN   Q V +++ G
Sbjct: 351  VSFAVTSSA-GISSPAV---------SGNTRSAALANAYQTQMSGIENLSPQ-VASSLSG 399

Query: 1884 ASAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWT 1705
            AS+QD+EEAKKGMAVAGK+NV P EEK+ADEEP +YA+K EAK+AFK+LLESA VESDWT
Sbjct: 400  ASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKHAFKSLLESATVESDWT 459

Query: 1704 WEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEES 1525
            WEQ MR+IINDKRYGALKTLGERKQAFNEYL QRKK EAEERR++Q++A+EEFTKMLEES
Sbjct: 460  WEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKMLEES 519

Query: 1524 KDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMD 1345
            K+LTSSTRWSKA++MFEDDERFK VER  DREDLF NYL++LQKKER KAQEE++RN ++
Sbjct: 520  KELTSSTRWSKAVTMFEDDERFKGVEREADREDLFRNYLVDLQKKERSKAQEEYRRNRLE 579

Query: 1344 YRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXX 1165
            Y+QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRL+IFQEY               
Sbjct: 580  YKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLDIFQEYIRDLEKEDEEQRKLQ 639

Query: 1164 XXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPK 985
                 RAERKNRD FRK++EEH+AAG+LTAK +WRDY+  VK++ AY AV+SNTSGSTPK
Sbjct: 640  KEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTYWRDYWQMVKESVAYQAVASNTSGSTPK 699

Query: 984  DLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLK 805
            DLFEDV EELEKQYHEDK  +KD +K  KIT+S T T EDFK A+ E + SP I +VNL+
Sbjct: 700  DLFEDVTEELEKQYHEDKIHVKDVVKSEKITISPTCTFEDFKVAILEGISSPSIQDVNLQ 759

Query: 804  LVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSI 625
            L+ +                     +DF+D L SIK+IT SS WE+ K L EDS E+R+I
Sbjct: 760  LIFEDLVERAKEKEEKEAKKRQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRAI 819

Query: 624  GDENIGREIFEEYTALLQ 571
            G+E I R +FEEY A LQ
Sbjct: 820  GEETISRAVFEEYVAWLQ 837


>ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 997

 Score =  662 bits (1708), Expect = 0.0
 Identities = 358/615 (58%), Positives = 426/615 (69%), Gaps = 9/615 (1%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETA---- 2221
            RADASTVWKEFT+ EGRKYYYNKVT+QS W IPEELKLAREQA+   +QG   ET+    
Sbjct: 227  RADASTVWKEFTSSEGRKYYYNKVTQQSTWSIPEELKLAREQAQNAANQGMQSETSDTCN 286

Query: 2220 ----ATQDPGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGPQSIPAVPSP 2053
                +T+ P  T+  A  + +TS  +                      SG        S 
Sbjct: 287  AVVSSTETPTPTAANAASL-NTSLTSNGLASSPSSVTPIAATDSQRLVSGLSGTSVSHSM 345

Query: 2052 LTTNAVGVH-SPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAVDGASA 1876
             T +  GV  S VV  + +P + +G +G    S          EN   QD  +A +G+S 
Sbjct: 346  ATPSTTGVEPSTVVTTSAAPTIVAGSSGLAENSPQQPKMPPVVENQASQDFASA-NGSSL 404

Query: 1875 QDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESDWTWEQ 1696
            QD+EEAK+ + V GK NVTP EEK  D+E LVYA+KLEAKNAFKALLES +V+SDWTWEQ
Sbjct: 405  QDIEEAKRPLPVVGKNNVTPPEEKTNDDETLVYANKLEAKNAFKALLESVSVQSDWTWEQ 464

Query: 1695 AMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLEESKDL 1516
            AMR IINDKRY ALKTLGERKQAFNEYLGQRKKLEAEERR+KQKRAREEFTKMLEE K+L
Sbjct: 465  AMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKEL 524

Query: 1515 TSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNIMDYRQ 1336
            TSS RWSKAISMFE+DERF AVER RDREDLFE+Y++EL++KE+  A EEH++NI +YR+
Sbjct: 525  TSSMRWSKAISMFENDERFNAVERPRDREDLFESYMVELERKEKENAAEEHRQNIAEYRK 584

Query: 1335 FLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXXXXXXX 1156
            FLESCD++KVNS WRK+QDRLEDD+R  RLEKIDRL +FQ+Y                  
Sbjct: 585  FLESCDYVKVNSPWRKIQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQKRIQKDR 644

Query: 1155 XXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGSTPKDLF 976
              R ERKNRD FRKL+ EHV+AGILTAK  WR+Y +KV+D P Y AV+SNTSGSTPKDLF
Sbjct: 645  IRRGERKNRDAFRKLLGEHVSAGILTAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLF 704

Query: 975  EDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVNLKLVL 796
            EDVAE+LEKQYHEDK+ IKDT+K GKITV +T   E+FK AV E      ISE+NLKL+ 
Sbjct: 705  EDVAEDLEKQYHEDKTLIKDTVKSGKITVVTTSVFEEFKVAVLEGAACQTISEINLKLIF 764

Query: 795  DXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYRSIGDE 616
            +                     +DF++LLY+ KDIT SSKWED K LFE++QEYRSIGDE
Sbjct: 765  EELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDITTSSKWEDCKSLFEETQEYRSIGDE 824

Query: 615  NIGREIFEEYTALLQ 571
            +  REIFEEY   L+
Sbjct: 825  SYSREIFEEYITYLK 839


>ref|XP_003549369.2| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 1008

 Score =  659 bits (1699), Expect = 0.0
 Identities = 361/620 (58%), Positives = 426/620 (68%), Gaps = 14/620 (2%)
 Frame = -1

Query: 2388 RADASTVWKEFTTPEGRKYYYNKVTKQSKWIIPEELKLAREQAEKIMSQGTLPETAATQD 2209
            RADASTVWKEFT+ EGRKYYYNKVT+QS W IPEELKLAREQA+K  +QG   ET  T +
Sbjct: 232  RADASTVWKEFTS-EGRKYYYNKVTQQSTWSIPEELKLAREQAQKAANQGMQSETNDTSN 290

Query: 2208 PGATSVPAVEVPSTSAIATXXXXXXXXXXXXXXXXXXXXXSGP-------QSIPAVP--- 2059
              A S  A   P+ +A+                         P       QS+  +    
Sbjct: 291  -AAVSSTATPTPTPTAVNAASLNTSLTSNHSNGLASSPSSVTPIAATDSQQSVSGLSGSS 349

Query: 2058 ---SPLTTNAVGVH-SPVVNVTPSPAVASGDTGTPGASAPPAITTSTFENTYRQDVPNAV 1891
               S +T +  GV  S VV  + +P + +G +G    S   +      EN   QD  + V
Sbjct: 350  VSHSIVTPSTTGVEPSTVVTTSAAPTIVAGSSGLAENSPQQSKMPPLVENQASQDFAS-V 408

Query: 1890 DGASAQDLEEAKKGMAVAGKVNVTPLEEKNADEEPLVYASKLEAKNAFKALLESANVESD 1711
            +G+S QD+EEAK+ + V GK NV P EEK  D+E LVYA+KLEAK AFKALLES NV+SD
Sbjct: 409  NGSSLQDIEEAKRSLPVVGKNNVVPPEEKTNDDETLVYANKLEAKLAFKALLESVNVQSD 468

Query: 1710 WTWEQAMRIIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRIKQKRAREEFTKMLE 1531
            WTWEQAMR IINDKRY ALKTLGERKQAFNEYLGQRKKLEAEERR+KQKRAREEFTKMLE
Sbjct: 469  WTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLE 528

Query: 1530 ESKDLTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLLELQKKERVKAQEEHKRNI 1351
            E K+LTSS RWSKAISMFE+DERF AVER RDREDLFE+Y++EL++KE+  A EEH+RNI
Sbjct: 529  ECKELTSSMRWSKAISMFENDERFNAVERLRDREDLFESYMVELERKEKENAAEEHRRNI 588

Query: 1350 MDYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYXXXXXXXXXXXXX 1171
             +YR+FLESCD++K NS WRK+QDRLEDD+R  RLEKID L +FQ+Y             
Sbjct: 589  AEYRKFLESCDYVKANSHWRKIQDRLEDDDRYLRLEKIDCLLVFQDYIRDLEKEEEEQKR 648

Query: 1170 XXXXXXXRAERKNRDEFRKLMEEHVAAGILTAKIHWRDYYIKVKDTPAYIAVSSNTSGST 991
                   R ERKNRD FRKL+EEHVAAGILTAK  W +Y +KV+D P Y AV+SNTSGST
Sbjct: 649  IQKDQIRRGERKNRDAFRKLLEEHVAAGILTAKTQWHEYCLKVRDLPQYQAVASNTSGST 708

Query: 990  PKDLFEDVAEELEKQYHEDKSRIKDTIKLGKITVSSTWTIEDFKSAVTEEVGSPPISEVN 811
            PKDLFED AE+LEKQYHEDK+ IKDTIK GKITV +T   E+FK AV EE     ISE+N
Sbjct: 709  PKDLFEDAAEDLEKQYHEDKTLIKDTIKSGKITVVTTSVFEEFKVAVLEEAACQTISEIN 768

Query: 810  LKLVLDXXXXXXXXXXXXXXXXXXXXXEDFSDLLYSIKDITASSKWEDGKPLFEDSQEYR 631
            LKL+ +                     +DF++LLY+ KDITASSKWED K LFE++QEYR
Sbjct: 769  LKLIFEELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDITASSKWEDCKSLFEEAQEYR 828

Query: 630  SIGDENIGREIFEEYTALLQ 571
            SIGDE+  REIFEEY   L+
Sbjct: 829  SIGDESYSREIFEEYITYLK 848