BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00009818
         (752 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    73   9e-11
ref|XP_006357775.1| PREDICTED: double-stranded RNA-binding prote...    69   1e-09
ref|XP_004231990.1| PREDICTED: uncharacterized protein LOC101257...    67   9e-09
ref|XP_006430634.1| hypothetical protein CICLE_v10011836mg [Citr...    64   7e-08
ref|XP_006430633.1| hypothetical protein CICLE_v10011836mg [Citr...    64   7e-08
ref|XP_006482141.1| PREDICTED: double-stranded RNA-binding prote...    63   1e-07
gb|EXB85835.1| Double-stranded RNA-binding protein 4 [Morus nota...    59   2e-06
ref|XP_007033051.1| DsRNA-binding domain-like superfamily protei...    59   2e-06
gb|EXB57534.1| Double-stranded RNA-binding protein 4 [Morus nota...    57   7e-06
ref|XP_006383311.1| hypothetical protein POPTR_0005s14370g [Popu...    57   7e-06

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 58/172 (33%), Positives = 76/172 (44%), Gaps = 35/172 (20%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLC-TGSGRVLSEIINSKHKLYAALYKVKETRMVSIF 574
           Y    G+NKKEAEQLAAR+ I  +L  +GSG +LSEII SK KLYAAL++VK+   +   
Sbjct: 149 YTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTG 208

Query: 573 TFP-------------------------------EATGQVIDVPAKILPMPELKKPKVEL 487
             P                                 +GQ++ VP    P+ EL+KPK  +
Sbjct: 209 ILPIGLTSGIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHELEKPKPNV 268

Query: 486 ACEASTDLTGNTSLSDQSLSGCPVEVIGS---QSSYVDATVGRKRPRKKNKK 340
           + E                   P+  + S   Q   V  T GRKR RK  KK
Sbjct: 269 SSEVIAP---------------PISFVPSVFEQPLVVSPTTGRKRNRKNKKK 305


>ref|XP_006357775.1| PREDICTED: double-stranded RNA-binding protein 4-like [Solanum
           tuberosum]
          Length = 355

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLCTGSGRVLSEIINSKHKLYAALYKVKETRMVSIFT 571
           Y   +GKNKKEAEQLAAR+A+  +L TG+G V+ EII SK KLYAAL KV++T  V+   
Sbjct: 175 YTGEIGKNKKEAEQLAARAAVISILETGAGTVMFEIIKSKRKLYAALDKVQDTGDVNAGF 234

Query: 570 FPEATGQVIDV 538
            P   G+ + V
Sbjct: 235 LPMEFGRPLHV 245


>ref|XP_004231990.1| PREDICTED: uncharacterized protein LOC101257125 [Solanum
           lycopersicum]
          Length = 403

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 37/71 (52%), Positives = 48/71 (67%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLCTGSGRVLSEIINSKHKLYAALYKVKETRMVSIFT 571
           Y   +GKNKKEAEQLAAR+A+  +L  G+G V+ EII SK KLYAAL KV++T  V+   
Sbjct: 221 YTGEIGKNKKEAEQLAARAAVISILENGAGTVMFEIIRSKGKLYAALDKVQDTGDVNAGF 280

Query: 570 FPEATGQVIDV 538
            P   G+ + V
Sbjct: 281 LPMEFGRPLHV 291


>ref|XP_006430634.1| hypothetical protein CICLE_v10011836mg [Citrus clementina]
           gi|557532691|gb|ESR43874.1| hypothetical protein
           CICLE_v10011836mg [Citrus clementina]
          Length = 348

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLCT-GSGRVLSEIINSKHKLYAALYKVKE------- 595
           Y    G++KKEAEQLAAR+ I+ LL T GS  +LSEII SK KLYAAL KVKE       
Sbjct: 128 YTGEPGRSKKEAEQLAARAVIRTLLVTSGSATILSEIIKSKGKLYAALNKVKESNYSTQK 187

Query: 594 --TRMVSIFTFPEATGQVIDVPAKILPMPELKKPKVELACEASTDLTGNTSLSDQSLSGC 421
             T  V     P+++  +  +P    P   +    + +  EA+  +    ++++ S    
Sbjct: 188 IATSYVPTTAIPKSSSGIHPIPT--TPEASVGMHSIPIIPEATAGIHPTPAITEASTGMH 245

Query: 420 PVEVIGSQSSYVDAT 376
           P   +   S+ + +T
Sbjct: 246 PTSAVIEVSTGMHST 260


>ref|XP_006430633.1| hypothetical protein CICLE_v10011836mg [Citrus clementina]
           gi|557532690|gb|ESR43873.1| hypothetical protein
           CICLE_v10011836mg [Citrus clementina]
          Length = 418

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLCT-GSGRVLSEIINSKHKLYAALYKVKE------- 595
           Y    G++KKEAEQLAAR+ I+ LL T GS  +LSEII SK KLYAAL KVKE       
Sbjct: 198 YTGEPGRSKKEAEQLAARAVIRTLLVTSGSATILSEIIKSKGKLYAALNKVKESNYSTQK 257

Query: 594 --TRMVSIFTFPEATGQVIDVPAKILPMPELKKPKVELACEASTDLTGNTSLSDQSLSGC 421
             T  V     P+++  +  +P    P   +    + +  EA+  +    ++++ S    
Sbjct: 258 IATSYVPTTAIPKSSSGIHPIPT--TPEASVGMHSIPIIPEATAGIHPTPAITEASTGMH 315

Query: 420 PVEVIGSQSSYVDAT 376
           P   +   S+ + +T
Sbjct: 316 PTSAVIEVSTGMHST 330


>ref|XP_006482141.1| PREDICTED: double-stranded RNA-binding protein 4-like [Citrus
           sinensis]
          Length = 420

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLCT-GSGRVLSEIINSKHKLYAALYKVKE------- 595
           Y    G++KKEAEQLAAR+ I+ LL T GS  +LSEII SK KLYAAL KVKE       
Sbjct: 200 YTGEPGRSKKEAEQLAARAVIRTLLVTSGSATILSEIIKSKGKLYAALNKVKESNYSTQK 259

Query: 594 --TRMVSIFTFPEATGQVIDVPA 532
             T  V     P+++  +  +PA
Sbjct: 260 IATSYVPTTAIPKSSSGIHPIPA 282


>gb|EXB85835.1| Double-stranded RNA-binding protein 4 [Morus notabilis]
          Length = 750

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/51 (66%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLL-CTGSGRVLSEIINSKHKLYAALYKV 601
           Y  G GKNKKEAEQLAAR+ I  LL  +  GRVL +II SK KLYAAL+KV
Sbjct: 211 YTGGAGKNKKEAEQLAARTVILSLLGDSRMGRVLYDIITSKVKLYAALHKV 261


>ref|XP_007033051.1| DsRNA-binding domain-like superfamily protein, putative [Theobroma
           cacao] gi|508712080|gb|EOY03977.1| DsRNA-binding
           domain-like superfamily protein, putative [Theobroma
           cacao]
          Length = 311

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLCTGS-GRVLSEIINSKHKLYAALYKVKETRMVSIF 574
           Y+   G+NKKEAEQLAAR+A+  LL     G  LSEII SK KLY AL KVK++ +  I 
Sbjct: 157 YSGKTGRNKKEAEQLAARAALLSLLDDSRYGTFLSEIIKSKAKLYVALNKVKDSSISHIG 216

Query: 573 TFP 565
           T P
Sbjct: 217 TTP 219


>gb|EXB57534.1| Double-stranded RNA-binding protein 4 [Morus notabilis]
          Length = 428

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLL-CTGSGRVLSEIINSKHKLYAALYKVKETRMVSIF 574
           Y  G GKNKKEAE+L AR+ I  LL  +  GRVL +II SK KLYAAL+KV     V   
Sbjct: 210 YTGGAGKNKKEAERLVARTIILSLLGDSRMGRVLYDIIKSKVKLYAALHKVSNLSTVPSM 269

Query: 573 T-----FPEATGQVIDVPAKILPMPELKKPKVELACEASTDLTGNTSLSDQSLSGCPVEV 409
                     +G+ +   A +     L      L         G    S   +  C V++
Sbjct: 270 ANMTHCSEGVSGKDVGAEASLAANNALTAAS-SLPTVVDNAAAGAVPDSGNGVPTCKVQI 328

Query: 408 IGSQSSY 388
           +G Q S+
Sbjct: 329 VGPQPSF 335


>ref|XP_006383311.1| hypothetical protein POPTR_0005s14370g [Populus trichocarpa]
           gi|550338918|gb|ERP61108.1| hypothetical protein
           POPTR_0005s14370g [Populus trichocarpa]
          Length = 470

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = -3

Query: 750 YNSGVGKNKKEAEQLAARSAIQHLLC-TGSGRVLSEIINSKHKLYAALYKVKE 595
           Y    G+NKKEAEQLAAR+ I  L+  +GS ++L EII SK KLYAAL +VK+
Sbjct: 266 YTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDRVKD 318