BLASTX nr result
ID: Cocculus23_contig00009812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00009812
(3692 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1241 0.0
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 1181 0.0
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 1119 0.0
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 1112 0.0
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 1112 0.0
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 1108 0.0
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 1107 0.0
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 1090 0.0
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 1066 0.0
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 1055 0.0
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 1052 0.0
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 1050 0.0
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no... 1031 0.0
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas... 1014 0.0
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me... 1013 0.0
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas... 1011 0.0
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 1006 0.0
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su... 1003 0.0
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 1003 0.0
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 999 0.0
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 1241 bits (3211), Expect = 0.0
Identities = 647/1216 (53%), Positives = 834/1216 (68%), Gaps = 49/1216 (4%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MDN + EQ VPSG LI + + V T D+ K SV++IDAVN++ +PKLGVPN S QCSTC
Sbjct: 1 MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60
Query: 369 SARDIKSCDG---------------------------------HYGAIKFPVGVIHPYFI 449
A+D K C+G H+G IKFP ++HPYF+
Sbjct: 61 GAKDTKKCEGAVRQVIQKLYLLMISCYLYFLEYAKLXLFIFLGHFGVIKFPFTILHPYFL 120
Query: 450 SEIVRMLNTICPGCKSVKEDFRIKGSTSISRTSTPENNQPCKYCAVNPFRRYPRMKFRAS 629
+E+V++LN ICPGCKS ++ +KG+ S SR ++ CKYCA N YP MKF+ S
Sbjct: 121 TEVVQILNKICPGCKSTRQGQWVKGADSGSRRL---RSKGCKYCAANSNDWYPTMKFKVS 177
Query: 630 SKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLPVDYWDFIQKDPQQVEPCSSPTMRTLS 809
SKD K IIVE+NE+L K+ Q + VLP+DYWDFI KDPQQ E C +P R LS
Sbjct: 178 SKDLFRKTA--IIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLS 235
Query: 810 AAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPITPNSSRVTESIHGFSNGPKLIFDDRTK 989
AQV+ LL+DID FIK+ R +S FL C P+TPN+ RVTE H SNG LIFD ++
Sbjct: 236 HAQVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSR 295
Query: 990 VYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKPANSDSKS---GLKWIKEVLLGKRTDYA 1160
YKKL+D + N+ V DCL SKL + K + DS S GLKWIKEVLLGKRT+++
Sbjct: 296 AYKKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNHS 355
Query: 1161 LRMTVVGDPSIKFCEIGIPRDISERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKD 1340
RM VVGDP ++ EIGIP I+E LLISE LNS NW K+ CNLRL E+G+ +VRRK
Sbjct: 356 FRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKG 415
Query: 1341 SLVCIRHTHELELGDVVYRHLDEGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPIC 1520
+L +R ++ + GD++YR L +GD++L+NRPPSIHQHS+IALSVK+LP++SVVS+NP+C
Sbjct: 416 TLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLC 475
Query: 1521 CSPFRADFDGDCLHGFVPQSIMSRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLL 1700
CSPFR DFDGDCLHG++PQS+ SRVEL ELV+L QL N+Q+GRNLLSL DSL+A +L+
Sbjct: 476 CSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLV 535
Query: 1701 RKKGVSLNRFQMQQLDMLCPHQLSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLD 1880
+ GV LN FQMQQL+M CP+QL PAI+K P T +WTG QL SMLLP F++VFPL+
Sbjct: 536 MEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLN 595
Query: 1881 EVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTV 2060
V IS GE+ISSS GS+WL+D DGN+F SL+ KALD L+AAQEVL W+SMRGL+V
Sbjct: 596 GVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSV 655
Query: 2061 SLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEV 2240
SLSD+Y L AEQTC KQL+VD +L+ GE V V
Sbjct: 656 SLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGV--V 713
Query: 2241 SDPN----HXXXXXXXXXXXVGAFKEVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKL 2408
D V AFK+ FRD+ N + Y +KDNSL++MLKAGSKG++LKL
Sbjct: 714 PDVQSLWYERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKL 773
Query: 2409 AQQTLCLGLQHSSVPLPFRVPCKLSSSMKNR-TISGLLENSHDIVDSAGSNFPYAIVEDS 2585
QQ LCLGLQHS VPL F++P +LS + N+ + GL++N D + A S PYA+VE+S
Sbjct: 774 VQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQN--DTSEYAESYIPYAVVENS 831
Query: 2586 FLDGLNPTECFVHSLACRDISFSENADVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLL 2765
FL GLNP ECFVHS+ RD SFS+NAD+PG+LTR+LMF+MRDLY+AYDGTVRNAYGNQL+
Sbjct: 832 FLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLV 891
Query: 2766 QFSYGV-----GDDNIIQDTGRCGF---GAPVGSLAACSISEAAYSALEQPISILETSPL 2921
QFSY + D I +DT C + G PVGS++AC+ISEAAYSAL+QPIS+LE SPL
Sbjct: 892 QFSYNIEHTSTPSDGINEDT--CAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPL 949
Query: 2922 LCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEYVAITIKNNLERVLFSDIVSTVII 3101
L LK +LE G ++S A R++SLFLSK +E+ +G EY A+ +KN+LE++LFSDIVSTV+I
Sbjct: 950 LNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMI 1009
Query: 3102 EFSQQTSDVEFLSPWICHFHISKERVEMKGLTVQSIVDTLNCKCYYSEEVSKANLPKLQI 3281
FS Q SPW+CHFH+ +E + + L SI+D L KC + SK NLP LQI
Sbjct: 1010 VFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQI 1069
Query: 3282 LSRDCCIEDAEECGGTFCITVSVEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDI 3461
S+DC ++ +E FCITVS+ S S + ++TVRDLV+PFLL V++G +++KKVDI
Sbjct: 1070 TSKDCFVDMEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDI 1129
Query: 3462 LWNDLPITSNSHDSSCGELFLKVYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLY 3641
LWND P S+ SS G L+L+VY+S C + W +L++ CL IM +IDW+RSHPD+++
Sbjct: 1130 LWNDNP-DSDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIH 1188
Query: 3642 DIFSIYGIDVAWEYFM 3689
DIF +YGID W+YF+
Sbjct: 1189 DIFVVYGIDAGWKYFL 1204
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 1181 bits (3054), Expect = 0.0
Identities = 615/1201 (51%), Positives = 813/1201 (67%), Gaps = 33/1201 (2%)
Frame = +3
Query: 186 NMDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCST 365
+M+N + + +P+ + + ++V D K SV+EI A ++V +PKLG PN S+ C+T
Sbjct: 3 SMENDLYEAEQLPAAFVTGIRFNVSNDRDNEKMSVMEIAAPSEVSDPKLGFPNFSNHCTT 62
Query: 366 CSARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRT 545
C A D+K C+GH+G I FP ++HPYF+SE+V++LN ICPGCKSV++D RIKG+ S+S+
Sbjct: 63 CGAADMKHCEGHFGVINFPYAILHPYFLSEVVQILNKICPGCKSVRKDLRIKGANSVSKV 122
Query: 546 STPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEV 725
+ + CKYC N YP M F+ SSKD K S IIVEV+E+ + + +
Sbjct: 123 N---QRKGCKYCVGNSIDWYPPMNFKISSKDLFRK--SAIIVEVSEKSSMKVRKRG-KQA 176
Query: 726 LPVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFP 905
LP DYWDFI KD QQ E P R LS +QV LL+D+D +FIKK +S+FL CFP
Sbjct: 177 LPSDYWDFIPKDEQQEESLIRPNRRVLSHSQVRYLLKDVDPEFIKKFVLSMDSIFLNCFP 236
Query: 906 ITPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVK 1085
+TPNS RVTE +H SNG +LIFD RT+VYKKL D + N+ HV +CL ISKLH K
Sbjct: 237 VTPNSHRVTEIMHASSNGQRLIFDQRTRVYKKLADFRGIANELSSHVLECLKISKLHLEK 296
Query: 1086 PANSDSK---------------SGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPR 1220
P+N +S SGL+++K+V+LGKR D+ RM + G+P++K EI IP
Sbjct: 297 PSNEESALVLAQKRNKDSASNMSGLRYMKDVILGKRNDHCFRMVLTGNPNLKLSEISIPC 356
Query: 1221 DISERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRH 1400
++ERL I+E LN+ N +L ACC+LRL E+GE HVRR+ LV IRH +L++GD ++R
Sbjct: 357 HVAERLQIAEQLNNWNEERLKACCDLRLLEKGEIHVRREGRLVRIRHNEKLQVGDTIFRP 416
Query: 1401 LDEGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQS 1580
L+ GD++L+NRPPSIHQHSLIALSVK+LPV SVVS+NP+ CSPFR DFDGDCLHG+VPQS
Sbjct: 417 LNNGDIILINRPPSIHQHSLIALSVKVLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQS 476
Query: 1581 IMSRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCP 1760
I +RVEL ELVSL QL N Q+GRNLLSL HDSLTA YL+++ GV LN FQMQQL+M CP
Sbjct: 477 IKARVELIELVSLNRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCP 536
Query: 1761 HQLSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQ 1940
+ PAI+K P ++ +WTG QLLSML P FD+ F ++V I GE+ISSS GS+WL+
Sbjct: 537 NHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEFDYDFTPNDVVIRNGELISSSEGSTWLR 596
Query: 1941 DTDGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXX 2120
D DGN+F SLI Y K LD L+AAQEVL W+SMRGL+VSLSDLY
Sbjct: 597 DADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSDSNSQKNMMDE 656
Query: 2121 XHYALQEAEQTCIIKQLMVDPQMGYLLSHGEEL-STKVHEVSDPNH-XXXXXXXXXXXVG 2294
LQE EQTC KQLMVD +L+ H EE+ S +V + V
Sbjct: 657 IFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCYEKQRSAALSQASVD 716
Query: 2295 AFKEVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPC 2474
+FK+VFRD+ N + Y +KDNSL++M KAGSKG++LKL Q +LCLGLQHS VPL FR P
Sbjct: 717 SFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLGLQHSLVPLSFRFPH 776
Query: 2475 KLS-SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISF 2651
+LS ++ N+ GL + D +SA + PYA+VE SF+ GLNP E FVHS+ RD SF
Sbjct: 777 QLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPLESFVHSVTSRDSSF 836
Query: 2652 SENADVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF-- 2825
S+NAD+PG+L+R+LMF+MRDLY AYDGTVRN+YG+ ++QF Y + D + G
Sbjct: 837 SDNADLPGTLSRRLMFFMRDLYTAYDGTVRNSYGDLVVQFCYDIDKDASSPTSCAHGLIS 896
Query: 2826 ----------GAPVGSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASR 2975
G PVGSL+AC+ISEAAYSAL+QP+S+LETSPLL LK ++E G KRS A +
Sbjct: 897 ESSTIPEGIGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKRVVECGSKRSNADQ 956
Query: 2976 SLSLFLSKDIERWLYGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICH 3155
+++LFLS + R +G EY A+ +KN+LER+ FSDIV+TV I FS Q +PW+CH
Sbjct: 957 TMTLFLSNKLGRKRHGSEYAALEVKNHLERLTFSDIVTTVSIIFSPQMYRENHFTPWVCH 1016
Query: 3156 FHISKERVEMKGLTVQSIVDTLNCKCYYSEEVSKANLPKLQILS--RDCCIEDAEECGGT 3329
FH+ K+ ++ + L VQSI+D+L+ C ++ + K +LP +QI S R C D T
Sbjct: 1017 FHVCKDTMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRACSHIDMPNEDDT 1076
Query: 3330 FCITVS-VEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSS 3506
FCITV+ VE S S + ++ +RD+V+P+LL VI+GF EIKKVDILW D S H SS
Sbjct: 1077 FCITVTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWKDRLKVSKPHKSS 1136
Query: 3507 CGELFLKVYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYF 3686
CGEL+L+V++S I K W +L+N+CL IM +IDW RSHPD++ + YGID W++F
Sbjct: 1137 CGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYGIDAGWKFF 1196
Query: 3687 M 3689
+
Sbjct: 1197 L 1197
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 1119 bits (2895), Expect = 0.0
Identities = 597/1184 (50%), Positives = 794/1184 (67%), Gaps = 17/1184 (1%)
Frame = +3
Query: 189 MDNGIIREQ-DVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCST 365
MDN E +VPSG L +S + T + K SV+EI AV++V NP+LG+PN +++CS+
Sbjct: 1 MDNEFCEEGLEVPSGILTGISLGISTDTEKEKLSVMEIGAVSEVTNPRLGLPNPTNECSS 60
Query: 366 CSARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRT 545
C A+D K+C+GH+G IKFP ++HPYF+S+I ++LN+ICP CK+++++ R KG+ S
Sbjct: 61 CGAKDRKACEGHFGFIKFPFTILHPYFLSDIAKLLNSICPKCKTIRKE-RQKGAGS---- 115
Query: 546 STPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEV 725
S E + CKYC NP + YPRM+F+ SSKD SGK IIVE++E+L K+ ++
Sbjct: 116 SRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKTA--IIVEIDEKLSKK------NKK 167
Query: 726 LPVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFP 905
LP DYW FI D QQ E P + LS QV LL+D+D ++ ++ FL CFP
Sbjct: 168 LPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPSIREEFILSKDAPFLKCFP 227
Query: 906 ITPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVK 1085
+TPN+ RVTE H FS+ KL FD+ T+ KK++D++ + V+DCL ISKLH K
Sbjct: 228 VTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDK 287
Query: 1086 PANSDS-------------KSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDI 1226
+ DS SGL+WIK+V+LGKR D RM V GDP+IK EIGIP +
Sbjct: 288 SSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCQV 347
Query: 1227 SERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLD 1406
+ERL ISE LNS NW +L+ C + RL E+GE +V RK LV IR LELGD++YR L
Sbjct: 348 AERLQISERLNSWNWERLSVCISFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPLT 407
Query: 1407 EGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIM 1586
+GD++L+NRPPSIH HSLIAL+VK+LP+ SVV++NP+CCSPF DFDGDCLHG++PQ+I
Sbjct: 408 DGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIG 467
Query: 1587 SRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQ 1766
+RVEL ELV+L+ QL NQQ+GRNLLSL DSLTA +LL + GV L+ QMQQL M CPH+
Sbjct: 468 ARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDGVLLSHLQMQQLQMFCPHR 527
Query: 1767 LSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDT 1946
P I K K +W+G QL SMLLP F++ FP +VYIS G++IS+ GSSWL+D
Sbjct: 528 FLSPDIFKISK--DSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLISAE-GSSWLRDY 584
Query: 1947 DGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXH 2126
+GN+F LI +Y K LD L+AAQEVL W+S+RG+TVSLSDLY
Sbjct: 585 EGNLFQYLIKRYRDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIF 644
Query: 2127 YALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEVSDPNH-XXXXXXXXXXXVGAFK 2303
Y L+EA+ TC +QLMVD M +L+S + ST+ + ++ V AFK
Sbjct: 645 YGLREAQDTCNFQQLMVDSHMNFLMSAKDSESTRSLQGEHLSYEKQRSAALSQASVDAFK 704
Query: 2304 EVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLS 2483
VF D+ N YGSKDNSL+ M KAGSKG++LKL Q +LCLGLQHS PL FR P +LS
Sbjct: 705 HVFWDIQNLAYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELS 764
Query: 2484 SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENA 2663
+ NR +G D + A S P A+VE+SFL GLNP ECF+HS+ RD SFS+NA
Sbjct: 765 CAAWNRLRAG------DNTECAKSYIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSDNA 818
Query: 2664 DVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGFGAPVGS 2843
D+PG+LTR+LMF+MRDL AYDGTVRNAYGNQ++QFSY + + TG G PVGS
Sbjct: 819 DLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNI--EGTSTPTGEIG-DQPVGS 875
Query: 2844 LAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYG 3023
L+AC+ISEAAYSAL+QPIS+LETSPLL LKN+LE G K+S A +++SLFLS + + +G
Sbjct: 876 LSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHG 935
Query: 3024 PEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLTVQ 3203
EY A+ +KN+LE ++ SDIVST +I +S QT ++ SPWICHFH+ KE ++ GL
Sbjct: 936 FEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEH 995
Query: 3204 SIVDTLNCKCYYSEEVSKANLPKLQILSRDC-CIEDAEECGGTFCITVS-VEISDGSAVL 3377
SI+D+L +C + K ++P + I ++DC I +EC FC+TV VE +++
Sbjct: 996 SIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSID 1055
Query: 3378 METVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSESCEIR 3557
+ET++ V+PFLL+ V++GF EIKKVDILW D S SHD S GEL+L+V MS C I
Sbjct: 1056 LETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHIT 1115
Query: 3558 KCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
W+ L+N+C IM +IDW RSHPD++ YGID ++F+
Sbjct: 1116 SLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFL 1159
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 1112 bits (2876), Expect = 0.0
Identities = 594/1185 (50%), Positives = 793/1185 (66%), Gaps = 17/1185 (1%)
Frame = +3
Query: 186 NMDNGIIREQ-DVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCS 362
+MDN E +VPSG L +S + T + K SV+EI AV++V NP+LG+PN +++CS
Sbjct: 38 SMDNEFCEEGLEVPSGILTGISLGISTDTEKEKLSVMEIGAVSEVTNPRLGLPNPTNECS 97
Query: 363 TCSARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISR 542
+C A+D K+C+GH+G IKFP ++HPYF+S+I ++LN+ICP CK+++++ R KG+ S
Sbjct: 98 SCGAKDRKACEGHFGFIKFPFTILHPYFLSDIAKLLNSICPKCKTIRKE-RQKGAGS--- 153
Query: 543 TSTPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSE 722
S E + CKYC NP + YPRM+F+ SSKD SGK IIVE++E+ K+ ++
Sbjct: 154 -SRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKTA--IIVEIDEKPSKK------NK 204
Query: 723 VLPVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCF 902
LP DYW FI D QQ E P + LS QV LL+D+D ++ ++ FL CF
Sbjct: 205 KLPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPSIREEFILSKDAPFLKCF 264
Query: 903 PITPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTV 1082
P+TPN+ RVTE H FS+ KL FD+ T+ KK++D++ + V+DCL ISKLH
Sbjct: 265 PVTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLD 324
Query: 1083 KPANSDS-------------KSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRD 1223
K + DS SGL+WIK+V+LGKR D RM V GDP+IK EIGIP
Sbjct: 325 KSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCH 384
Query: 1224 ISERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHL 1403
++ERL ISE LNS NW +L+ C + RL E+GE +V RK LV IR LELGD++YR L
Sbjct: 385 VAERLQISERLNSWNWERLSVCTSFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPL 444
Query: 1404 DEGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSI 1583
+GD++L+NRPPSIH HSLIAL+VK+LP+ SVV++NP+CCSPF DFDGDCLHG++PQ+I
Sbjct: 445 TDGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAI 504
Query: 1584 MSRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPH 1763
+RVEL ELV+L+ QL NQQ+GRNLLSL DSLTA +LL + V L+ QMQQL M CPH
Sbjct: 505 GARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPH 564
Query: 1764 QLSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQD 1943
+ P I K K +W+G QL SMLLP F++ FP +VYIS G++IS+ GSSWL+D
Sbjct: 565 RFLSPDIFKISK--DSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLISAE-GSSWLRD 621
Query: 1944 TDGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXX 2123
+GN+F LI +Y K LD L+AAQEVL W+S+RG+TVSLSDLY
Sbjct: 622 YEGNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEI 681
Query: 2124 HYALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEVSDPNH-XXXXXXXXXXXVGAF 2300
Y L+EA+ TC +QLMVD M +L+S + ST+ + ++ V AF
Sbjct: 682 FYGLREAQDTCNFQQLMVDSHMNFLMSAEDSESTRSLQGEHLSYEKQRSAALSQASVDAF 741
Query: 2301 KEVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKL 2480
K VF D+ N YGSKDNSL++M KAGSKG++LKL Q +LCLGLQHS PL FR P +L
Sbjct: 742 KHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHEL 801
Query: 2481 SSSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSEN 2660
S + NR +G D + A S P A+V +SFL GLNP ECF+HS+ RD SFS+N
Sbjct: 802 SCAAWNRLRAG------DNTECAKSYIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDN 855
Query: 2661 ADVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGFGAPVG 2840
AD+PG+LTR+LMF+MRDL AYDGTVRNAYGNQ++QFSY + + TG G G VG
Sbjct: 856 ADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNI--EGTSTPTGEIG-GQSVG 912
Query: 2841 SLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLY 3020
SL+AC+ISEAAYSAL+QPIS+LETSPLL LKN+LE G K+S A +++SLFLS + + +
Sbjct: 913 SLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRH 972
Query: 3021 GPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLTV 3200
G EY A+ +KN+LE ++ SDIVST +I +S QT ++ SPWICHFH+ KE ++ GL
Sbjct: 973 GFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKE 1032
Query: 3201 QSIVDTLNCKCYYSEEVSKANLPKLQILSRDC-CIEDAEECGGTFCITVS-VEISDGSAV 3374
SI+D+L +C + K ++P + I ++DC I +EC FC+TV VE +++
Sbjct: 1033 HSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSI 1092
Query: 3375 LMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSESCEI 3554
+ET++ V+PFLL+ V++GF EIKKVDILW D S SHD S GEL+L+V MS C I
Sbjct: 1093 DLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHI 1152
Query: 3555 RKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
W+ L+N+C IM +IDW RSHPD++ YGID ++F+
Sbjct: 1153 TSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFL 1197
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 1112 bits (2875), Expect = 0.0
Identities = 594/1184 (50%), Positives = 792/1184 (66%), Gaps = 17/1184 (1%)
Frame = +3
Query: 189 MDNGIIREQ-DVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCST 365
MDN E +VPSG L +S + T + K SV+EI AV++V NP+LG+PN +++CS+
Sbjct: 1 MDNEFCEEGLEVPSGILTGISLGISTDTEKEKLSVMEIGAVSEVTNPRLGLPNPTNECSS 60
Query: 366 CSARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRT 545
C A+D K+C+GH+G IKFP ++HPYF+S+I ++LN+ICP CK+++++ R KG+ S
Sbjct: 61 CGAKDRKACEGHFGFIKFPFTILHPYFLSDIAKLLNSICPKCKTIRKE-RQKGAGS---- 115
Query: 546 STPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEV 725
S E + CKYC NP + YPRM+F+ SSKD SGK IIVE++E+ K+ ++
Sbjct: 116 SRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKTA--IIVEIDEKPSKK------NKK 167
Query: 726 LPVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFP 905
LP DYW FI D QQ E P + LS QV LL+D+D ++ ++ FL CFP
Sbjct: 168 LPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPSIREEFILSKDAPFLKCFP 227
Query: 906 ITPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVK 1085
+TPN+ RVTE H FS+ KL FD+ T+ KK++D++ + V+DCL ISKLH K
Sbjct: 228 VTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDK 287
Query: 1086 PANSDS-------------KSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDI 1226
+ DS SGL+WIK+V+LGKR D RM V GDP+IK EIGIP +
Sbjct: 288 SSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCHV 347
Query: 1227 SERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLD 1406
+ERL ISE LNS NW +L+ C + RL E+GE +V RK LV IR LELGD++YR L
Sbjct: 348 AERLQISERLNSWNWERLSVCTSFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPLT 407
Query: 1407 EGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIM 1586
+GD++L+NRPPSIH HSLIAL+VK+LP+ SVV++NP+CCSPF DFDGDCLHG++PQ+I
Sbjct: 408 DGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIG 467
Query: 1587 SRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQ 1766
+RVEL ELV+L+ QL NQQ+GRNLLSL DSLTA +LL + V L+ QMQQL M CPH+
Sbjct: 468 ARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDSVLLSHLQMQQLQMFCPHR 527
Query: 1767 LSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDT 1946
P I K K +W+G QL SMLLP F++ FP +VYIS G++IS+ GSSWL+D
Sbjct: 528 FLSPDIFKISK--DSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLISAE-GSSWLRDY 584
Query: 1947 DGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXH 2126
+GN+F LI +Y K LD L+AAQEVL W+S+RG+TVSLSDLY
Sbjct: 585 EGNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIF 644
Query: 2127 YALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEVSDPNH-XXXXXXXXXXXVGAFK 2303
Y L+EA+ TC +QLMVD M +L+S + ST+ + ++ V AFK
Sbjct: 645 YGLREAQDTCNFQQLMVDSHMNFLMSAEDSESTRSLQGEHLSYEKQRSAALSQASVDAFK 704
Query: 2304 EVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLS 2483
VF D+ N YGSKDNSL++M KAGSKG++LKL Q +LCLGLQHS PL FR P +LS
Sbjct: 705 HVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELS 764
Query: 2484 SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENA 2663
+ NR +G D + A S P A+V +SFL GLNP ECF+HS+ RD SFS+NA
Sbjct: 765 CAAWNRLRAG------DNTECAKSYIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNA 818
Query: 2664 DVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGFGAPVGS 2843
D+PG+LTR+LMF+MRDL AYDGTVRNAYGNQ++QFSY + + TG G G VGS
Sbjct: 819 DLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNI--EGTSTPTGEIG-GQSVGS 875
Query: 2844 LAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYG 3023
L+AC+ISEAAYSAL+QPIS+LETSPLL LKN+LE G K+S A +++SLFLS + + +G
Sbjct: 876 LSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHG 935
Query: 3024 PEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLTVQ 3203
EY A+ +KN+LE ++ SDIVST +I +S QT ++ SPWICHFH+ KE ++ GL
Sbjct: 936 FEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEH 995
Query: 3204 SIVDTLNCKCYYSEEVSKANLPKLQILSRDC-CIEDAEECGGTFCITVS-VEISDGSAVL 3377
SI+D+L +C + K ++P + I ++DC I +EC FC+TV VE +++
Sbjct: 996 SIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENFKRTSID 1055
Query: 3378 METVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSESCEIR 3557
+ET++ V+PFLL+ V++GF EIKKVDILW D S SHD S GEL+L+V MS C I
Sbjct: 1056 LETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHIT 1115
Query: 3558 KCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
W+ L+N+C IM +IDW RSHPD++ YGID ++F+
Sbjct: 1116 SLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFL 1159
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 1108 bits (2866), Expect = 0.0
Identities = 588/1186 (49%), Positives = 781/1186 (65%), Gaps = 26/1186 (2%)
Frame = +3
Query: 213 QDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTCSARDIKSC 392
Q +PS L ++++ V T A+ K SV+ ID V++V + KLG+PN ++QCSTC ++D+KSC
Sbjct: 10 QQLPSALLTAITFGVSTEAEKEKLSVLTIDTVSEVTDSKLGLPNPTNQCSTCGSKDLKSC 69
Query: 393 DGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTSTPENNQPC 572
+GH+G IKFP ++HPY++SE+VR+LN +CP CKS++++ +++ ++ P
Sbjct: 70 EGHFGVIKFPFTILHPYYLSEVVRILNQVCPKCKSIRKESKVRCLNHLN---------PK 120
Query: 573 KYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLPVDYWDFI 752
+ YP MKF SS++ KNV II + +ER + Q + L DYWD I
Sbjct: 121 LPVLLILLCWYPAMKFSVSSEEIFRKNV--IIAKFSERPTNKSQKRGFKKKLAADYWDII 178
Query: 753 QKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPITPNSSRVT 932
KD QQ E + P R LS AQV LL +ID FI+K + +S+FL CF +TPN RVT
Sbjct: 179 PKDEQQEENITRPNQRVLSHAQVIHLLENIDPNFIRKFVLKRDSIFLNCFSVTPNCHRVT 238
Query: 933 ESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKPANSD---- 1100
E H FSNG +L+FDDRT+ YKK++D + + V DCL SK++ K N+D
Sbjct: 239 EVTHAFSNGQRLVFDDRTRAYKKMVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMA 298
Query: 1101 ----------SKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISE 1250
S SGL+WIK+V+LGKR D + RM VVGDP+IKF EIGIP I+ERL ISE
Sbjct: 299 LQRKMNDSSSSSSGLRWIKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIAERLQISE 358
Query: 1251 SLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVN 1430
L + NW KLN CC +RL E+G+ HVRR+ LV +R T EL +GD++YR L++GD +L+N
Sbjct: 359 HLTTWNWDKLNTCCEVRLLEKGDMHVRREGKLVRVRRTKELRIGDIIYRPLNDGDTVLIN 418
Query: 1431 RPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELREL 1610
RPPSIHQHSLIALSVK+LP SV+++NP+ C+PFR DFDGDCLHG+VPQS+ +RVELREL
Sbjct: 419 RPPSIHQHSLIALSVKVLPATSVLAINPLICAPFRGDFDGDCLHGYVPQSVDTRVELREL 478
Query: 1611 VSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILK 1790
V+L+ QL N QNGRNLLS DSL A +L+ + GV L+ QMQQL M CPHQL PA+ K
Sbjct: 479 VALDKQLINVQNGRNLLSFSQDSLVAAHLVMEDGVLLSLQQMQQLQMFCPHQLFSPAVRK 538
Query: 1791 GPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSL 1970
P WTG QL+SMLLP FD P +VYI GE+ISS GS WL+DTDGN+F SL
Sbjct: 539 APSLNGCAWTGKQLISMLLPRGFDHECPSSDVYIRDGELISSE-GSFWLRDTDGNLFQSL 597
Query: 1971 IDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQ 2150
I + + LD L+ AQEVL W+SMRGL+VSLSDLY C + LQ+A+
Sbjct: 598 IKQCQDQVLDFLYIAQEVLCEWLSMRGLSVSLSDLYLCPDSDSRENMMDEVLFGLQDAKG 657
Query: 2151 TCIIKQLMVDPQMGYLLSHGEELSTKVH-EVSDPNH-XXXXXXXXXXXVGAFKEVFRDLL 2324
TC +KQ MVD +L S E+ V+ +V H V AFK VFRD+
Sbjct: 658 TCNMKQFMVDSCRDFLASIDEDEQYSVNFDVEHLCHEKQRSAALSQASVDAFKHVFRDIQ 717
Query: 2325 NRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKNRT 2504
Y SKDN+L++M K+GSKG++LK+ Q ++CLGLQHS VPL FR+P +LS N+
Sbjct: 718 TLGYKYASKDNALMAMFKSGSKGNLLKVVQHSMCLGLQHSLVPLSFRMPLQLSCDAWNK- 776
Query: 2505 ISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPGSLT 2684
+ + + V+ A S P A+VE FL GLNP ECFVHS+ R+ SFS+NAD+PG+LT
Sbjct: 777 -----QKAENAVECARSYIPSAVVEGCFLTGLNPLECFVHSVTSRESSFSDNADLPGTLT 831
Query: 2685 RKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF--------GAPVG 2840
R+LMF+MRD++ AYDG+VR+AYGNQL+QFSY + + + G G PVG
Sbjct: 832 RRLMFFMRDVHAAYDGSVRSAYGNQLIQFSYNIDEGRSAETYGTAKIVDNYDGMAGKPVG 891
Query: 2841 SLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLY 3020
SLAACSISEAAYSAL+QPIS+LE SPLL LKN+LE G K+S A +S+SLFLS+ + R +
Sbjct: 892 SLAACSISEAAYSALDQPISLLEKSPLLNLKNVLECGLKKSNAHKSMSLFLSEKLGRRRH 951
Query: 3021 GPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLTV 3200
G EY A+ ++++LER+LFSDIVS I FS Q+ SPW+CHFH+ KE ++ + L V
Sbjct: 952 GFEYGALKVQDHLERLLFSDIVSVSRIIFSSQSESKTCFSPWVCHFHVYKEIMKKRNLNV 1011
Query: 3201 QSIVDTLNCKCYYSEEVSKANLPKLQILSRDCCIED-AEECGGTFCITVS-VEISDGSAV 3374
SI++ LN +C S NLP +QI + C I D E T CITV+ VE S S+
Sbjct: 1012 DSIINILNGRC-----KSNTNLPNVQISCKSCSIADNHREKEETLCITVTIVERSKNSST 1066
Query: 3375 LMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSESCEI 3554
+ T++DL++PFLL V++G MEI KVDILW D P S +H+ GEL+L+V MS E
Sbjct: 1067 RLATIQDLMIPFLLETVLKGLMEINKVDILWKDWPRISKTHNQPYGELYLRVSMSADSEK 1126
Query: 3555 RKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFMR 3692
+ WNLL++ CL IM +IDW S PD++ D YGID W++F++
Sbjct: 1127 TRLWNLLMDYCLPIMDMIDWTCSRPDNVRDFSLAYGIDAGWKFFLQ 1172
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 1107 bits (2863), Expect = 0.0
Identities = 602/1188 (50%), Positives = 784/1188 (65%), Gaps = 28/1188 (2%)
Frame = +3
Query: 210 EQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTCSARDIKS 389
E +PSG L +++SV DI +VI +DA N+V +PKLG+PN S QC+TC A +K
Sbjct: 8 ELPIPSGLLTGINFSVSNQQDIENIAVITVDAANEVSDPKLGLPNPSYQCTTCGASSLKF 67
Query: 390 CDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTSTPENNQP 569
C+GH+G IKFP +IHPYF+SE+ ++LN +CPGCKSV+++ K S + P+
Sbjct: 68 CEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSVRQELWGKVEDPTSDYNRPKG--- 124
Query: 570 CKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLPVDYWDF 749
C+YC + YP M+F+ S+ D K++ I+VEV E + K++Q LP DYWDF
Sbjct: 125 CRYCFGSLKDWYPPMRFKLSTTDMFKKSM--IMVEVKENMSKKYQKRVAKGGLPSDYWDF 182
Query: 750 IQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPITPNSSRV 929
I KD QQ E P + L+ AQV+ LL+DID KF+KK P +SLFL FP+TPNS RV
Sbjct: 183 IPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRV 242
Query: 930 TESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISK---------LHTV 1082
TE H FSNG +LIFD+RT+ YKK++D + N+ G V DCL ISK L+ V
Sbjct: 243 TEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKAIYNIFVFCLNHV 302
Query: 1083 K------PANSDSKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLI 1244
+ S SGL+WIK+V+LGKR+D+ RM VVGDP+I+ EIGIP ++ERL I
Sbjct: 303 NYYQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQI 362
Query: 1245 SESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLL 1424
SE L+S N KL+ C L L E+GE +VRR+ LV +R+ EL +GD +YR L +GD++L
Sbjct: 363 SEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTIYRPLADGDIVL 422
Query: 1425 VNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELR 1604
VNRPPSIHQHSLIALSVK+LPV +V+SLNP+CCSPFR DFDGDCLHG+VPQS+ +RVE+R
Sbjct: 423 VNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVR 482
Query: 1605 ELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAI 1784
ELVSL+ QLTN Q+GRNLLSL HDSLTA +L+ + GVSLN FQMQQL ML HQL PAI
Sbjct: 483 ELVSLDKQLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAI 542
Query: 1785 LKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFC 1964
+K P + WTG QL S+LLP FD+ P V+I KGE+ISS GS WL+D+ N+F
Sbjct: 543 VKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELISSE-GSYWLRDSGRNLFQ 601
Query: 1965 SLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEA 2144
+LI+ K LD L AQ VL W+S RGL+VSLSDLY LQEA
Sbjct: 602 ALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHENMMDDIFCGLQEA 661
Query: 2145 EQTCIIKQLMVDPQMGYLLSHGEE----LSTKVHEVSDPNHXXXXXXXXXXXVGAFKEVF 2312
E+TC +KQLMVD L+ + E+ LS V + V AFK+VF
Sbjct: 662 EETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLI--YEKQKSAALNQASVDAFKKVF 719
Query: 2313 RDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSM 2492
RD+ N + Y KDNSL++M KAGSKG+++KL Q ++CLGLQHS V L F +P KLS +
Sbjct: 720 RDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCAA 779
Query: 2493 KNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVP 2672
N + D S PYA+VE+SFL GLNP ECF HS+ RD SFS+NA+VP
Sbjct: 780 WNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVP 839
Query: 2673 GSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVG-------DDNIIQDTGRCGFGA 2831
G+LTRKL F MRD+Y AYDGTVRNAYGNQL+QF Y + +N +D G G
Sbjct: 840 GTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSESESENNNRDRGIGGH-- 897
Query: 2832 PVGSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIER 3011
PVGSLAAC+ISEAAYSAL+QPIS+LE SPLL LK +LE G KR+ ++ SLFLS+ + +
Sbjct: 898 PVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRNSTKQTFSLFLSEKLSK 957
Query: 3012 WLYGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKG 3191
YG EY A+ +KN+LERV+F DIVS+V+I FS S + SPW+CHFH+ KE ++ +
Sbjct: 958 RSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPLPSRKKHFSPWVCHFHVCKEILKKRR 1017
Query: 3192 LTVQSIVDTLNCKCYYSEEVSKANLPKLQILSRDCCIEDA-EECGGTFCITVSV-EISDG 3365
L + S++ +LN +C + + NLP LQI+++DC + D+ E G T C+TV++ E +
Sbjct: 1018 LKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLTVTIAENTKN 1077
Query: 3366 SAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSES 3545
S + ++ ++DL++ FLL VIRGF EI +VDI WND P S GEL+L+V MS
Sbjct: 1078 SFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPKPR-CSHGELYLRVTMSGE 1136
Query: 3546 CEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
R W L+N CL IM LIDW RSHPD+ + + YGID W+YF+
Sbjct: 1137 GNSR-FWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFL 1183
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 1090 bits (2819), Expect = 0.0
Identities = 589/1199 (49%), Positives = 786/1199 (65%), Gaps = 32/1199 (2%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MDN + + +P + + +V T D K S + I+ V +PKLG+PN +SQCSTC
Sbjct: 1 MDNELNHGEQLPRACITGVHLNVSTREDTEKISTLLIETAAQVNDPKLGLPNPTSQCSTC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
A+D K CDGH+G+IKFP ++HPY++SE+ +LN ICP CK++K+ R+KGS
Sbjct: 61 GAQDTKLCDGHFGSIKFPCSILHPYYLSEVSLILNKICPACKAIKQGVRVKGS------- 113
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
+ C+YC V+ YPRM+F+ SS++ + S IIVE + L
Sbjct: 114 ---ERKGCRYCFVSS-SDYPRMRFKVSSRELFRR--STIIVEA-------------AGEL 154
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P DYWDFI KDPQ E ++P + LS AQV+ LL D+D FI K P +SL L CF +
Sbjct: 155 PPDYWDFIPKDPQHDETNTNPHRKVLSHAQVHFLLSDVDSNFITKFVPTTSSLSLDCFLV 214
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKP 1088
TPN RVTE ++ F+NG L+FDDRT+ Y+KL+D + N+ G V DCL ISK++ K
Sbjct: 215 TPNCHRVTEVMYSFNNGQSLMFDDRTRAYRKLVDFRGTANELGSRVLDCLKISKINKEKT 274
Query: 1089 A------------NSDSK-SGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDIS 1229
+S S+ SGL+WIK+V+LGKR+D+ RM VVGDP+IK EIGIPR I+
Sbjct: 275 GRDSISVEQQKIKDSPSRTSGLRWIKDVVLGKRSDHCFRMVVVGDPNIKLSEIGIPRHIA 334
Query: 1230 ERLLISESLNSRNWVKLNACCNLRLFE--RGEFHVRRKDSLVCIRHTHELELGDVVYRHL 1403
E++ ISE+LN N+ KL C LRL RG+ HVRR DSLV IR ELE+GD++YR L
Sbjct: 335 EKMQISENLNQYNFEKLFVFCQLRLGPDGRGDIHVRRNDSLVRIRKPEELEMGDIIYRAL 394
Query: 1404 DEGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSI 1583
GDV+L+NRPPSIHQHSLIAL+ K+LPV+SVVS+NP+CCSPF+ DFDGDCLHG+VPQS+
Sbjct: 395 SNGDVVLINRPPSIHQHSLIALTTKVLPVNSVVSINPLCCSPFQGDFDGDCLHGYVPQSV 454
Query: 1584 MSRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPH 1763
+RVEL ELV+L+ QL N Q+G NL+SL DSLTA YL+ + G +N+FQMQQL+MLCPH
Sbjct: 455 ETRVELTELVALDKQLVNGQSGTNLMSLSQDSLTAFYLITEDGTLMNKFQMQQLNMLCPH 514
Query: 1764 QLSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQD 1943
+L PA++K P + WT Q++SM LP FD+ FP + VYIS GE+I+SS GSSWL+D
Sbjct: 515 ELPLPAVIKHPSGNSVSWTAKQIVSMFLPADFDYAFPSNGVYISNGELIASSEGSSWLRD 574
Query: 1944 TDGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXX 2123
T GN+F SL + + LDI F+AQ VL W+SMRGL+VSLSDLY
Sbjct: 575 TSGNLFQSLTEHCHGQVLDIFFSAQGVLCEWLSMRGLSVSLSDLYLASDTCSRKNLMEEI 634
Query: 2124 HYALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEVSDPN---HXXXXXXXXXXXVG 2294
Y LQEAE+ C I+QLM+D +L+ + E S + V
Sbjct: 635 FYGLQEAEEACTIRQLMLDSFQDFLMGYDENKSQSPLTFGSEHFCYQKQKTAALSQVTVD 694
Query: 2295 AFKEVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPC 2474
A KE FRD+ N Y DNSL++M KAGSKG+MLKL Q +CLGLQHS VPL F+ P
Sbjct: 695 AIKEGFRDVQNLAYKYAGVDNSLLAMFKAGSKGNMLKLVQHCMCLGLQHSLVPLSFKFPN 754
Query: 2475 KLS-SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISF 2651
+LS + ++ G+++ +S S P A+V+ SFL GLNP ECFVHS+ RD SF
Sbjct: 755 QLSCDAWNDQKARGIVQEVGRNFESIESYIPSAVVKSSFLTGLNPVECFVHSVTSRDGSF 814
Query: 2652 SENADVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTG------ 2813
S NA++PG+L RKLM++MRDL+ AYDGTVRNAYGNQL+QFSY + + D+
Sbjct: 815 SNNAELPGTLNRKLMYFMRDLHTAYDGTVRNAYGNQLIQFSYDIDEGISTADSTTNSSYA 874
Query: 2814 ----RCGFGAPVGSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSL 2981
CG PVG+L+AC+ISEAAYSAL+QP+S+LE SPLL LKNILE G KRS A +++
Sbjct: 875 KSVINCGGSQPVGALSACAISEAAYSALDQPVSLLEASPLLNLKNILECGSKRSSAKQTM 934
Query: 2982 SLFLSKDIERWLYGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFH 3161
SLFLS ++R +G EY A+ +KN+LE + FSDIVSTV+I FS Q+ SPW+ HFH
Sbjct: 935 SLFLSDKLDRHRHGFEYGALEVKNHLEGLNFSDIVSTVMIMFSSQSGSKMRFSPWVSHFH 994
Query: 3162 ISKERVEMKGLTVQSIVDTLNCKCYYSEEVSKANLPKLQILSRDC-CIEDAEECGGTFCI 3338
ISKE V + L VQSI++ L C + A+L K+ I+ R+C C + TFCI
Sbjct: 995 ISKEIVRRRRLNVQSIIEALYAMC----NSAGADL-KIMIIGRECDCCSTPND---TFCI 1046
Query: 3339 TVSV-EISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGE 3515
+V++ E + S+ ++ R LV+PFLL+ V++GF+EIKKVDILW D P S GE
Sbjct: 1047 SVTLTEKYNNSSKELDKTRVLVIPFLLKTVVKGFLEIKKVDILWIDRP-------GSSGE 1099
Query: 3516 LFLKVYMS-ESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
L L+V MS ++ + WN+L+++C+ +M +IDW RSHPD+++DI + YGIDV ++F+
Sbjct: 1100 LCLRVSMSGKTRKGTTLWNMLMDDCIPVMDMIDWSRSHPDNVHDICTAYGIDVGQKHFL 1158
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 1066 bits (2758), Expect = 0.0
Identities = 582/1178 (49%), Positives = 768/1178 (65%), Gaps = 18/1178 (1%)
Frame = +3
Query: 210 EQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTCSARDIKS 389
EQ VP G L +++S+L+ D K S I AVN+V +P LG PN QC+TC A D K
Sbjct: 8 EQQVPEGILTGINFSILSETDAAKLSAKVIGAVNEVTDPALGFPNPIFQCTTCGANDGKK 67
Query: 390 CDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTSTPENNQP 569
C+GH+G + FP +++PYF+SE+ ++L ICPGCKSV+ D ++KGS RTS
Sbjct: 68 CEGHFGLVNFPYTILNPYFVSEVAQILKKICPGCKSVRRD-KVKGS---DRTSA------ 117
Query: 570 CKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLPVDYWDF 749
CKYC R YP KF+ S KD G+ II EVNE LLK+ Q L DYWDF
Sbjct: 118 CKYCD-GVLRGYPPTKFKVSPKDMFGRTA--IIAEVNENLLKKVQQTT-GVSLASDYWDF 173
Query: 750 IQKDPQQVEPCSSPTM-RTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPITPNSSR 926
I D QQ +S R LS AQVY +L+DID F++ L R NS+FL +TPNS R
Sbjct: 174 IPYDAQQEASVNSSNYKRVLSHAQVYSILKDIDPGFLEGLLKRKNSIFLKSCLLTPNSHR 233
Query: 927 VTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKPANSDSK 1106
VTE G +IFD+ ++Y+KL+D + ND + V D + +SK+ + +D
Sbjct: 234 VTEF------GQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPN 287
Query: 1107 S---GLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISESLNSRNWVK 1277
+ GLK++KE++L KRT++A RM VVGDP+I+ EIGIP ++E L ++ESL+ RNW +
Sbjct: 288 APATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWER 347
Query: 1278 LNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVNRPPSIHQHS 1457
+ C+L + +RG VRR LV I L+ GD+++R L +GDV+++NRPPSIHQHS
Sbjct: 348 MTDLCDLMILQRGGILVRRNGVLVRISVMDRLQNGDIIHRPLIDGDVVMINRPPSIHQHS 407
Query: 1458 LIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELRELVSLENQLTN 1637
LIALSV+ILP++SV+S+NP+ CSPFR DFDGDCLHG++PQSI SR+EL ELV+L+ QL +
Sbjct: 408 LIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLD 467
Query: 1638 QQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILKGPKCQTPMW 1817
QNG+NLLSL HDSLTA +L+ + GV L+RFQMQQL M CP QL AI+K P W
Sbjct: 468 GQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNLCYW 527
Query: 1818 TGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKAL 1997
TG QL S+LLP+ ++VFP + V IS+GEI++SS GSSWL+D N+F SL+ +G L
Sbjct: 528 TGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDVSDNLFYSLVKHHGGDTL 587
Query: 1998 DILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMV 2177
D+L+AAQ VL W+SMRGL+VSLSDLY LQEAE+ I+ LM+
Sbjct: 588 DLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSGLQEAERLSYIQLLMI 647
Query: 2178 DPQMGYLLSHGEELSTKVHEVSD--PNHXXXXXXXXXXXVGAFKEVFRDLLNRIIVYGSK 2351
+L EE + + AFK+VFRD+ N + Y S
Sbjct: 648 KYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASN 707
Query: 2352 DNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKNRTISGL-LENS 2528
DNSL++MLKAGSKG++LKL Q ++CLGLQ S VP+ FR+P +LS N S L +E
Sbjct: 708 DNSLLAMLKAGSKGNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKP 767
Query: 2529 HDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPGSLTRKLMFYMR 2708
H + + GS P A+V+ SFL GLNP ECFVHSL RD SFS +ADV G+L RKLMF+MR
Sbjct: 768 HKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMR 827
Query: 2709 DLYMAYDGTVRNAYGNQLLQFSY----------GVGDDNIIQDTGRCGFGAPVGSLAACS 2858
DLY+ YDGTVRNAYGNQ++QFSY G GD ++ G PVGSLAAC+
Sbjct: 828 DLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTKGTGD--ALESHNHAIGGHPVGSLAACA 885
Query: 2859 ISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEYVA 3038
ISEAAYSAL+QP+S LE+SPLL LK ILESG ++ S+FLSK + RW +G EY A
Sbjct: 886 ISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMFLSKRLGRWAHGFEYGA 945
Query: 3039 ITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLTVQSIVDT 3218
+ +K +LER+L S++VSTV+I FS +T PW+CHFHI KE V+ + L ++SI+D
Sbjct: 946 LEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSILDA 1005
Query: 3219 LNCKCYYSEEVSKANLPKLQILSRDCCIEDAEECGGTFCITVS-VEISDGSAVLMETVRD 3395
LN + + +LP L I +DC + +A + CITVS VE S + L++T+RD
Sbjct: 1006 LNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSEICITVSVVETSKDPSSLLDTLRD 1065
Query: 3396 LVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSESCEIRKCWNLL 3575
+V+PFLL VI+GF KKVDILW +LP S S S GEL+L+V+MSESC+ K WN L
Sbjct: 1066 VVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNAL 1125
Query: 3576 LNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
++ CL I LIDW+RS+PDD++D+ YGIDVAWEYF+
Sbjct: 1126 VDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFL 1163
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 1055 bits (2728), Expect = 0.0
Identities = 567/1194 (47%), Positives = 764/1194 (63%), Gaps = 28/1194 (2%)
Frame = +3
Query: 192 DNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTCS 371
D + E VPSG + ++ + VLTG DI K S +EI+A V LG+PNLS C+TC
Sbjct: 3 DEDLATEHIVPSGLIKAIKFDVLTGEDIEKISALEINAPTQVTCSDLGLPNLSLGCTTCG 62
Query: 372 ARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTST 551
++D KSC+GH+GAIKFP ++HPYF++EI +LN ICP CKS++ + RIK S+ +
Sbjct: 63 SKDRKSCEGHFGAIKFPFTILHPYFMAEIAEILNKICPACKSIRRELRIKRVKSLLGFNQ 122
Query: 552 PENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLP 731
P+ CKYC N RYP MKFR SS D + IIVEVN+ LK+ + NL LP
Sbjct: 123 PKG---CKYCG-NGMGRYPTMKFRVSSNDFFRRTA--IIVEVNDVALKKKR--NLGRGLP 174
Query: 732 VDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPIT 911
DYWDFI D QQ E + LS QV +L +D FIKK PR + + L+CF +
Sbjct: 175 ADYWDFILGDAQQEE--NHANRMVLSPVQVENILSGVDSNFIKKYIPRMDLVALSCFLVA 232
Query: 912 PNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKPA 1091
PN RVTE H S G L FD+RT+ KKL+D + N+ V DCL SK++ K
Sbjct: 233 PNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPDKTP 292
Query: 1092 --------------NSDSKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDIS 1229
N+ + SGL+W+K+++LGKR D + R VVGDP ++ EIG+P I+
Sbjct: 293 SNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDSSFRTVVVGDPDLELSEIGLPCQIA 352
Query: 1230 ERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDE 1409
E L +SE +N +N L CC LRL E+G+ +V RK V + ++++GD+ YR L +
Sbjct: 353 EGLQVSEYVNRQNKQNLLYCCELRLLEKGQINVCRKGRPVVLFKKEDVQIGDIFYRPLVD 412
Query: 1410 GDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMS 1589
GD +L+NRPPSIHQHS+IAL+V++LP+ SVVS+NP+CCSP R DFDGDCLHG++PQS+ +
Sbjct: 413 GDRVLINRPPSIHQHSMIALTVRVLPISSVVSINPLCCSPLRGDFDGDCLHGYIPQSVGA 472
Query: 1590 RVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQL 1769
RVEL ELV+L+ QL N Q+GRNLLSL DSLTA YLL + GV LN +QMQQL M C +L
Sbjct: 473 RVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCSRKL 532
Query: 1770 SCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTD 1949
PAI+K P T W+G QL SML+P+ FD+ FP D V++ GE+IS S S WL+D+D
Sbjct: 533 IPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASGWLRDSD 592
Query: 1950 GNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHY 2129
N+F SL++ + K LDIL AQ+ L W+SM G +VSLSDLY Y
Sbjct: 593 NNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISY 652
Query: 2130 ALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVH-EVSDPNH-XXXXXXXXXXXVGAFK 2303
LQEAEQ C QL+VD +L +E+ V +V N+ V AF+
Sbjct: 653 GLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQASVDAFR 712
Query: 2304 EVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLS 2483
+VFR++ + Y KDN+ ++M KAGSKG++LKL Q ++CLGLQHS V LP+++P KLS
Sbjct: 713 QVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLS 772
Query: 2484 SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENA 2663
+ N ++ D V+ S PYA+VE SFL GLNP ECFVHS+ RD SFS+NA
Sbjct: 773 CAAWNSQKG--MQIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNA 830
Query: 2664 DVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF--GAPV 2837
D+PG+LTR+LMF+MRD+Y AYDGTVRN YGNQL+QFSY +D+ R G PV
Sbjct: 831 DLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSHFREDTIGGEPV 890
Query: 2838 GSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWL 3017
G+L+AC++SEAAYSAL QPIS+LE SPLL LK +LE G ++ +++SLFLS+ I +
Sbjct: 891 GTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQR 950
Query: 3018 YGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLT 3197
G EY A+ +KN LER++FSDIVSTV+I F+ Q+ +E SPW+CHFH+ KE V + L
Sbjct: 951 NGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENVTRRNLE 1010
Query: 3198 VQSIVDTLNCKCYYSEEVSKANLPKLQILSRDCCI-----EDAE-----ECGGTFCITVS 3347
V SI+D+L + + SK LP L+I ++ C + E E E G CITV+
Sbjct: 1011 VHSIIDSLYQRYDSLRKGSKVTLPNLKISTKKCSVHYMAKEGGETSVDKEIDGEDCITVT 1070
Query: 3348 VEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLK 3527
+ + ++V ++ VR++++PFLLR I+G EIKKVDILW DL S S++ S GEL+L+
Sbjct: 1071 IVENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLSKGSKSYNGSSGELYLR 1130
Query: 3528 VYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
V MS + W L+N C IM +IDW RSHPD+++ S +GID W++F+
Sbjct: 1131 VTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAFGIDAGWQHFL 1184
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 1052 bits (2720), Expect = 0.0
Identities = 568/1195 (47%), Positives = 764/1195 (63%), Gaps = 29/1195 (2%)
Frame = +3
Query: 192 DNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTCS 371
D + E VPSG + ++ + VLTG DI K S +EI+A V LG+PNLS C+TC
Sbjct: 3 DEDLATEHIVPSGLIKAIKFDVLTGEDIEKISALEINAPTQVTCSDLGLPNLSLGCTTCG 62
Query: 372 ARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTST 551
++D KSC+GH+GAIKFP ++HPYF++EI +LN ICP CKS++ + RIK S+ +
Sbjct: 63 SKDRKSCEGHFGAIKFPFTILHPYFMAEIAEILNKICPACKSIRRELRIKRVKSLLGFNQ 122
Query: 552 PENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLP 731
P+ CKYC N RYP MKFR SS D + IIVEVN+ LK+ + NL LP
Sbjct: 123 PKG---CKYCG-NGMGRYPTMKFRVSSNDFFRRTA--IIVEVNDVALKKKR--NLGRGLP 174
Query: 732 VDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPIT 911
DYWDFI D QQ E + LS QV +L +D FIKK PR + + L+CF +
Sbjct: 175 ADYWDFILGDAQQEE--NHANRMVLSPVQVENILSGVDSNFIKKYIPRMDLVALSCFLVA 232
Query: 912 PNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKPA 1091
PN RVTE H S G L FD+RT+ KKL+D + N+ V DCL SK++ K
Sbjct: 233 PNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPDKTP 292
Query: 1092 --------------NSDSKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDIS 1229
N+ + SGL+W+K+++LGKR D + R VVGDP ++ EIG+P I+
Sbjct: 293 SNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDSSFRTVVVGDPDLELSEIGLPCQIA 352
Query: 1230 ERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDE 1409
E L +SE +N +N L CC LRL E+G+ +V RK V + ++++GD+ YR L +
Sbjct: 353 EGLQVSEYVNRQNKQNLLYCCELRLLEKGQINVCRKGRPVVLFKKEDVQIGDIFYRPLVD 412
Query: 1410 GDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMS 1589
GD +L+NRPPSIHQHS+IAL+V++LP+ SVVS+NP+CCSP R DFDGDCLHG++PQS+ +
Sbjct: 413 GDRVLINRPPSIHQHSMIALTVRVLPISSVVSINPLCCSPLRGDFDGDCLHGYIPQSVGA 472
Query: 1590 RVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQL 1769
RVEL ELV+L+ QL N Q+GRNLLSL DSLTA YLL + GV LN +QMQQL M C +L
Sbjct: 473 RVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCSRKL 532
Query: 1770 SCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTD 1949
PAI+K P T W+G QL SML+P+ FD+ FP D V++ GE+IS S S WL+D+D
Sbjct: 533 IPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASGWLRDSD 592
Query: 1950 GNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHY 2129
N+F SL++ + K LDIL AQ+ L W+SM G +VSLSDLY Y
Sbjct: 593 NNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEISY 652
Query: 2130 ALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVH-EVSDPNH-XXXXXXXXXXXVGAFK 2303
LQEAEQ C QL+VD +L +E+ V +V N+ V AF+
Sbjct: 653 GLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISAALSQASVDAFR 712
Query: 2304 EVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLS 2483
+VFR++ + Y KDN+ ++M KAGSKG++LKL Q ++CLGLQHS V LP+++P KLS
Sbjct: 713 QVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLS 772
Query: 2484 SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENA 2663
+ N ++ D V+ S PYA+VE SFL GLNP ECFVHS+ RD SFS+NA
Sbjct: 773 CAAWNSQKG--MQIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNA 830
Query: 2664 DVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF--GAPV 2837
D+PG+LTR+LMF+MRD+Y AYDGTVRN YGNQL+QFSY +D+ R G PV
Sbjct: 831 DLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSHFREDTIGGEPV 890
Query: 2838 GSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWL 3017
G+L+AC++SEAAYSAL QPIS+LE SPLL LK +LE G ++ +++SLFLS+ I +
Sbjct: 891 GTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQR 950
Query: 3018 YGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLT 3197
G EY A+ +KN LER++FSDIVSTV+I F+ Q+ +E SPW+CHFH+ KE V + L
Sbjct: 951 NGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENVTRRNLE 1010
Query: 3198 VQSIVDTLNCKCYYSEEVSKANLPKLQI-LSRDCCI-----EDAE-----ECGGTFCITV 3344
V SI+D+L + + SK LP L+I +R C + E E E G CITV
Sbjct: 1011 VHSIIDSLYQRYDSLRKGSKVTLPNLKISTNRKCSVHYMAKEGGETSVDKEIDGEDCITV 1070
Query: 3345 SVEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFL 3524
++ + ++V ++ VR++++PFLLR I+G EIKKVDILW DL S S++ S GEL+L
Sbjct: 1071 TIVENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLSKGSKSYNGSSGELYL 1130
Query: 3525 KVYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
+V MS + W L+N C IM +IDW RSHPD+++ S +GID W++F+
Sbjct: 1131 RVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAFGIDAGWQHFL 1185
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 1050 bits (2716), Expect = 0.0
Identities = 572/1176 (48%), Positives = 762/1176 (64%), Gaps = 16/1176 (1%)
Frame = +3
Query: 210 EQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTCSARDIKS 389
EQ VP G L +++S+L+ D K S I AVN+V +P LG PN QC+TC A D K
Sbjct: 8 EQQVPDGILRGINFSILSETDAAKLSAKVIGAVNEVTDPALGFPNPIFQCTTCGANDGKK 67
Query: 390 CDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTSTPENNQP 569
C+GH+G + FP +++PYF+SE+ ++L ICPGCKSV+ D ++K S RTS
Sbjct: 68 CEGHFGLVNFPYTILNPYFVSEVAQILKKICPGCKSVRRD-KVKVS---DRTSA------ 117
Query: 570 CKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLPVDYWDF 749
CKYC R YP KF+ S KD G+ II EVNE LLK+ Q L DYWDF
Sbjct: 118 CKYCD-GVLRGYPPTKFKVSPKDMFGRTA--IIAEVNENLLKKVQKTT-GVSLASDYWDF 173
Query: 750 IQKDPQQVEPCSSPTM-RTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPITPNSSR 926
I D QQ +S R LS AQVY +L+DID F++ L R NS+FL +TPNS R
Sbjct: 174 IPYDAQQEASVNSSNYKRVLSHAQVYSILKDIDPGFLEGLLRRKNSIFLKSCLLTPNSHR 233
Query: 927 VTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKPANSDSK 1106
VTE G +IFD+ ++Y+KL+D + ND + V D + +SK+ + +D
Sbjct: 234 VTEF------GQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPN 287
Query: 1107 S---GLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISESLNSRNWVK 1277
+ GLK++KE++L KRT++A RM VVGDP+I+ EIGIP ++E L ++E+L+ RNW +
Sbjct: 288 APATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWER 347
Query: 1278 LNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVNRPPSIHQHS 1457
+ C+L + +RG VRR LV I L+ GD+++R L +GDV+++NRPPSIHQHS
Sbjct: 348 MTDLCDLMILQRGGILVRRNGVLVRISVMDGLQKGDIIHRPLVDGDVVMINRPPSIHQHS 407
Query: 1458 LIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELRELVSLENQLTN 1637
LIALSV+ILP++SV+S+NP+ CSPFR DFDGDCLHG++PQSI S +EL ELV+L+ QL +
Sbjct: 408 LIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQLLD 467
Query: 1638 QQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILKGPKCQTPMW 1817
QNG+NLLSL HDSLTA +L+ + GV L+RFQMQQL M CP QL AI+K P W
Sbjct: 468 GQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNICYW 527
Query: 1818 TGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKAL 1997
TG QL S+LLP+ ++VFP + V IS+GEI++SS GSSWL+D N+F SL+ G L
Sbjct: 528 TGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNLFYSLVKHNGGDTL 587
Query: 1998 DILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMV 2177
D+L+AAQ VL W+SMRGL+VSLSDLY LQEAE+ I+ LM+
Sbjct: 588 DLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQEAERLSYIQLLMI 647
Query: 2178 DPQMGYLLSHGEELSTKVHEVSD--PNHXXXXXXXXXXXVGAFKEVFRDLLNRIIVYGSK 2351
+L + EE + + AFK+VFRD+ N + Y S
Sbjct: 648 KYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVFRDIQNLVYNYASN 707
Query: 2352 DNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKNRTISGL-LENS 2528
DNSL++MLKAGSKG++LKL Q +CLGLQ S VP+ FR+P +LS N S L +E
Sbjct: 708 DNSLLAMLKAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKP 767
Query: 2529 HDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPGSLTRKLMFYMR 2708
H + + GS P A+V+ SFL GLNP ECFVHSL RD SFS +ADV G+L RKLMF+MR
Sbjct: 768 HKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMR 827
Query: 2709 DLYMAYDGTVRNAYGNQLLQFSYGVGDD--------NIIQDTGRCGFGAPVGSLAACSIS 2864
DLY+ YDGTVRNAYGNQ++QFSY + ++ G PVGSLAAC+IS
Sbjct: 828 DLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESHNHAIGGHPVGSLAACAIS 887
Query: 2865 EAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEYVAIT 3044
EAAY AL+QP+S LE+SPLL LK ILESG ++ S+FLSK + RW +G EY A+
Sbjct: 888 EAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSKRLGRWAHGFEYGALE 947
Query: 3045 IKNNLERVLFSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLTVQSIVDTLN 3224
+K +LER+L S++VSTV+I FS +T PW+CHFHI KE V+ + L ++S++D LN
Sbjct: 948 VKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENVKTRRLKLRSVLDALN 1007
Query: 3225 CKCYYSEEVSKANLPKLQILSRDCCIEDAEECGGTFCITVS-VEISDGSAVLMETVRDLV 3401
+ + + +LP L I +DC + + ++ CITVS VE S + L++T+RD+V
Sbjct: 1008 MRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKSEICITVSVVETSKDPSSLLDTLRDVV 1067
Query: 3402 VPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSESCEIRKCWNLLLN 3581
+PFLL VI+GF KKVDILW +LP S S GEL+L+V+MSESC+ K WN L++
Sbjct: 1068 IPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVD 1127
Query: 3582 ECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
CL I LIDW+RS+PDD++D+ YGIDVAWEYF+
Sbjct: 1128 SCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFL 1163
>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
Length = 1410
Score = 1031 bits (2667), Expect = 0.0
Identities = 562/1173 (47%), Positives = 756/1173 (64%), Gaps = 6/1173 (0%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
M+N + ++ VP G L S+S+++ D SV+ I+ N+V +P+LG+PN SS CSTC
Sbjct: 1 MENELHEDERVPFGVLTSISFTISNKEDTESRSVMSIELSNEVTDPRLGLPNPSSSCSTC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
A D KSC+GH+G IK P V++PYF+SE+V++LN ICPGCKS+++D R+KG
Sbjct: 61 GANDSKSCEGHFGHIKLPFTVLNPYFVSEVVQVLNKICPGCKSIRQDLRVKG-------- 112
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
N YP+ KF+ SS + S II EVNE + Q+ VL
Sbjct: 113 -------------NSLEWYPKTKFKVSSNEYDHLKKSAIIAEVNESTVT-LQNKRPKRVL 158
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P DYW+F+ KD E C P R LS AQV+ LL+D+D +FIKK PR + LFL CFP+
Sbjct: 159 PADYWEFLPKDELLDESCIRPNRRVLSHAQVHYLLKDVDPEFIKKFVPRTDLLFLNCFPV 218
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKP 1088
TPN RVTE H FSNG +L + K+ K + K + G P
Sbjct: 219 TPNCHRVTEFHHAFSNGQRLKYLHSEKLSSKEVLFAQQKTNEG----------------P 262
Query: 1089 ANSDSKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISESLNSRN 1268
+N+ SG +W+KEV+LGKR+D+ LRM VVGDP+I+ EIGIP I+ER+ IS LN N
Sbjct: 263 SNT---SGSRWVKEVVLGKRSDHCLRMVVVGDPNIRLNEIGIPARIAERMHISVVLNKLN 319
Query: 1269 WVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVNRPPSIH 1448
K +AC ++R+ E+G ++ R +V +R T L++GD +YR L +GD++L+NRPPSIH
Sbjct: 320 LEKSDACRDMRVTEQG-IYIHRDSHIVRVRPTDFLKIGDTIYRPLSDGDLVLINRPPSIH 378
Query: 1449 QHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELRELVSLENQ 1628
QHS +A SVK+LP S +SLNP+CCSPFRADFDGDCLHG++PQS+ SRVEL+ELVSL+ Q
Sbjct: 379 QHSHVAFSVKVLPTGSALSLNPLCCSPFRADFDGDCLHGYIPQSVASRVELKELVSLDKQ 438
Query: 1629 LTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILKGPKCQT 1808
L N Q+G+NL+SL DSLTA +L+ + V++NRFQMQQL M H PAI+K P T
Sbjct: 439 LLNGQSGKNLISLSQDSLTAAHLMLEDSVTINRFQMQQLQMFISHHPLSPAIIKAPSLST 498
Query: 1809 PMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGY 1988
P+WTG Q+ SMLLP FD+VF VYI GE+IS+ GSSWL+DTD NIF SL +
Sbjct: 499 PVWTGKQVFSMLLPEGFDYVFSSANVYIKNGELISAE-GSSWLRDTD-NIFQSLAKNFPD 556
Query: 1989 KALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQ 2168
K LDILFAAQE+L W+S RGL+VSL DL Y LQEAEQ C+ KQ
Sbjct: 557 KVLDILFAAQEILCEWLSTRGLSVSLLDLNLSSDPSSWKNMKDEIFYGLQEAEQACMFKQ 616
Query: 2169 LMVDPQMGYLLSHGEELSTKVHEVSDPNH-XXXXXXXXXXXVGAFKEVFRDLLNRIIVYG 2345
L+ E+LS +V +H + AFK+VFRD+ Y
Sbjct: 617 LLNTCWDFLTEDSMEDLSPISLQVEKLSHDKQRSAVLSQASIDAFKKVFRDIQTLAFRYA 676
Query: 2346 SKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKN-RTISGLLE 2522
+DNSL++MLKAGSKG++LKL Q ++CLGLQHS VPL F P LS + N +S L++
Sbjct: 677 CEDNSLLTMLKAGSKGNLLKLVQHSMCLGLQHSLVPLSFGFPHLLSCAAWNEHKVSCLIQ 736
Query: 2523 NSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPGSLTRKLMFY 2702
D SA S PYA+V +SFL GLNP E FVHS+ R+ SFS+NA++PG+L R+LM++
Sbjct: 737 EDADAPKSAKSYIPYAVVGNSFLTGLNPLESFVHSVTSRESSFSDNAELPGTLHRRLMYF 796
Query: 2703 MRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGFGAPVGSLAACSISEAAYSA 2882
MRDLY+AYDGT+RN+YG+ ++QF YG D+ + G+ PVGSL+AC+ISEAAYSA
Sbjct: 797 MRDLYIAYDGTIRNSYGSHVVQFYYGT-DEGTSEIAGQ-----PVGSLSACAISEAAYSA 850
Query: 2883 LEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEYVAITIKNNLE 3062
L+QPIS+LETSPLL LKN LE G K+ +++ L+LS+ + R +G EY A+ +KN LE
Sbjct: 851 LDQPISLLETSPLLNLKNALECGSKKRQGGQTMLLYLSRRLGRQRHGYEYAALEVKNYLE 910
Query: 3063 RVLFSDIVSTVIIEFSQQT---SDVEFLSPWICHFHISKERVEMKGLTVQSIVDTLNCKC 3233
++FSDIVSTV+I F+ Q + SPW E + + LTVQS++++L +
Sbjct: 911 ALMFSDIVSTVMITFTSQAGSQKSQKSFSPW--------EILRRRRLTVQSVINSLYERH 962
Query: 3234 YYSEEVSKANLPKLQILSRDCCI-EDAEECGGTFCITVSVEISDGSAVLMETVRDLVVPF 3410
S + SK LP L+I S+DC + EE T CITVS+E S S + + TV+DL++PF
Sbjct: 963 STSRKGSKVKLPNLRIRSKDCSVPATREEDNDTCCITVSIECSKNSVIQLITVQDLLIPF 1022
Query: 3411 LLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSESCEIRKCWNLLLNECL 3590
LL +++GF EI+KVDILW+D TS + S GEL+LKV MS ++ W+ L+N+CL
Sbjct: 1023 LLETIVKGFREIEKVDILWSDRSNTSKATRDSSGELYLKVSMSGDSGVKSYWSTLMNDCL 1082
Query: 3591 HIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFM 3689
IM LIDW RSHP+++ + S+YGID W++F+
Sbjct: 1083 RIMDLIDWSRSHPENVNEFCSVYGIDSGWKFFL 1115
>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031868|gb|ESW30447.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 1014 bits (2623), Expect = 0.0
Identities = 551/1190 (46%), Positives = 759/1190 (63%), Gaps = 22/1190 (1%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MD+ PSG + ++ + VLT DI K SV+EI+A V LG+PN S +C+TC
Sbjct: 1 MDDEFFYGNKAPSGVIRAIKFDVLTENDIEKVSVLEINAAGQVTGSTLGLPNTSDECATC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
+++ K C+GH+G IKFP ++HPYF+SEI ++LN ICP CKS++ + KG+ I
Sbjct: 61 GSKNKKICEGHFGVIKFPFPILHPYFMSEIAQILNKICPVCKSIRH--KSKGAQLIFGIK 118
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
N CKYC+ N RYP MKF+ SS D + IIVEVN++ K+ +L L
Sbjct: 119 RSIN---CKYCSGNGVGRYPAMKFKFSSNDLYRRTA--IIVEVNDKASKK----SLGRSL 169
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P DYWDF+ D QQ E + R LS QV LL D+D FI+K PR N + L CFP+
Sbjct: 170 PADYWDFLPYDAQQEE--NYVNRRVLSPGQVTSLLNDVDPNFIEKYVPRNNLITLNCFPV 227
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVR-DCLNISKLHTVK 1085
TPN RVTE + SNG +L FDDRT+ KKL+D + N+ + D IS ++
Sbjct: 228 TPNCHRVTEVPYAISNGNRLSFDDRTRSCKKLVDFRGTANELSSRLNPDKTPISIFADIQ 287
Query: 1086 PA----NSDSKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISES 1253
N+ + SGL+WIK+V+LGKR D R VVGDPS++ EIGIP I+E L +SE
Sbjct: 288 KKKVAENACNSSGLRWIKDVILGKRNDSTFRTVVVGDPSLELSEIGIPCHIAESLQVSEY 347
Query: 1254 LNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVNR 1433
+N +N KL CC LRL E+G+ +V RK S + + +L++GD YR L +GD +L+NR
Sbjct: 348 VNRQNLEKLLYCCELRLLEKGQINVCRKGSSIHLFKKEDLQIGDQFYRPLCDGDKVLINR 407
Query: 1434 PPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELRELV 1613
PPSIHQHS+IAL+V++LP+ SVV +NP+CCSP R DFDGDCLHG++PQS+ +RVEL ELV
Sbjct: 408 PPSIHQHSMIALTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVSARVELSELV 467
Query: 1614 SLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILKG 1793
+L+ QL N Q+GRNLLSL DSLTA YLL + GV L+ +QMQQL MLC L+ PAI+K
Sbjct: 468 ALDKQLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQMLCNKGLAPPAIVKS 527
Query: 1794 PKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLI 1973
P + W+G QL SMLLP+ FD+ FP D V +S GE++SS S WL+D+D N+F L+
Sbjct: 528 PSSNSSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLV 587
Query: 1974 DKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQT 2153
+ + K+L+ LFAAQ VL W+SM G +VSLSDLY Y LQ+AE+
Sbjct: 588 EHFQGKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQDAEKA 647
Query: 2154 CIIKQLMVDPQMGYLLSHGEELSTKVHEVSDP--NHXXXXXXXXXXXVGAFKEVFRDLLN 2327
C KQL++D +L + EE + +D V AF+ VFR++ +
Sbjct: 648 CNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALSQASVDAFRHVFRNIQS 707
Query: 2328 RIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKNRTI 2507
Y DN+ ++M KAGSK S+++LAQ ++CLG+Q+S V L +R+P LS + N +
Sbjct: 708 LADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVRLSYRLPRHLSCAAWN-SQ 766
Query: 2508 SGL--LENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPGSL 2681
GL ++ ++S S P A+V+ SFL GLNP ECFVHS+ R FSENADVPG+L
Sbjct: 767 KGLDSIQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSVTIRASGFSENADVPGTL 826
Query: 2682 TRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF---GAPVGSLAA 2852
TR+LMF+MRDL+ AYDGTVRN YGNQL+QFSY + D+N D + G PVG+L+A
Sbjct: 827 TRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDI-DENTSCDKSFKEYAIGGEPVGALSA 885
Query: 2853 CSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEY 3032
++SEA YSAL+QP+S+LE SPLL LKN+LE G ++ +S+SLF S+ + + +G EY
Sbjct: 886 SAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSRKKNGDQSVSLFFSEKVGKQRHGFEY 945
Query: 3033 VAITIKNNLERVLFSDIVSTVIIEFS-QQTSDVEFLSPWICHFHISKERVEMKGLTVQSI 3209
A+ +KN LER+LFS IVSTV+I F+ +S +E SPW+CHFH+ KE + + L V SI
Sbjct: 946 AALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEKYSPWVCHFHLDKEILMRRKLKVHSI 1005
Query: 3210 VDTLNCKCYYSEEVSKANLPKLQILSRDCCIEDAEECGGTF---------CITVSVEISD 3362
+D L + Y K KL+I S+ C ++ + G CITV++ +
Sbjct: 1006 IDYLYQRYYSQSTEPKVGFTKLKISSKKCSVDSTAKEGEDICIDKEDSDDCITVTIVENS 1065
Query: 3363 GSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSE 3542
+ + + +VRDL++PF L I+GFM+IKKVDILWN+ +NS++ S GEL+L+V ++
Sbjct: 1066 ENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWNNQSKGTNSYNGSSGELYLRVTVAS 1125
Query: 3543 SCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFMR 3692
S + W +L+N C IM +IDW RSHPD++ + S YGIDVAW+Y+ +
Sbjct: 1126 SGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYK 1175
>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1687
Score = 1013 bits (2619), Expect = 0.0
Identities = 564/1248 (45%), Positives = 760/1248 (60%), Gaps = 83/1248 (6%)
Frame = +3
Query: 192 DNGIIREQDVPSGRLISMSYSVLTGADILKF----------------------------- 284
D + VPS + ++ + VLTG DI+K+
Sbjct: 120 DEDLATVHKVPSALIKAIKFEVLTGEDIVKYILVLISISTLQLFCVYQITVSLAVELGQL 179
Query: 285 ----SVIEIDAVNDVINPKLGVPNLSSQCSTCSARDIKSCDGHYGAIKFPVGVIHPYFIS 452
S +EI+A V LG+PN S C+TC ++D KSC+GH+GAIKFP ++HPYF++
Sbjct: 180 HEKISALEINAPGQVTCSDLGLPNSSYGCTTCGSKDRKSCEGHFGAIKFPFTILHPYFMA 239
Query: 453 EIVRMLNTICPGCKSVKEDFRIKGSTSISRTSTPENNQP--CKYCAVNPFRRYPRMKFRA 626
EI +L ICP CKS++++ R+K + S+ NNQP CKYC N RYP MKFR
Sbjct: 240 EIAEILQKICPACKSIRQEIRVKRAKSL----LGYNNQPKGCKYCCGNGMGRYPAMKFRV 295
Query: 627 SSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVLPVDYWDFIQKDPQQVEPCSSPTMRTL 806
SS D + IIVEVN+ L + + NL LP DYWDFI D QQ E + + L
Sbjct: 296 SSNDFFRRTA--IIVEVNDISLNKKR--NLGRGLPADYWDFILGDVQQEE--NHVNRKVL 349
Query: 807 SAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPITPNSSRVTESIHGFSNGPKLIFDDRT 986
S QV LL +D FI+K P + + L+CF + PN RVTE H S G L FD+RT
Sbjct: 350 SPVQVENLLSGVDPNFIEKFIPSMDLVGLSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRT 409
Query: 987 KVYKKLLDHKTPKNDFGLHVRDCLNISK--LHTVKP-----------------ANSDSKS 1109
+ KKL+D + N+ V DCL SK + P N+ + S
Sbjct: 410 RACKKLVDFRGTANELSSRVLDCLRFSKASFSVINPDRTPVNIFTELQQRKVGENACNSS 469
Query: 1110 GLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISESLNSRNWVKLNAC 1289
GL+W+K+V+LGKR D R VVGDP ++ EIGIP I+E L +SE +N +N L C
Sbjct: 470 GLRWMKDVVLGKRNDCTFRTVVVGDPDLELSEIGIPCQIAEALQVSEYVNRQNRQNLLYC 529
Query: 1290 CNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVNRPPSIHQHSLIAL 1469
C LRL E+G+ +VRR + V + +L++GD+ YR L +GD +L+NRPPSIHQHS+IAL
Sbjct: 530 CELRLLEKGQINVRRNGNPVVLYKKEDLQIGDIFYRPLVDGDKVLINRPPSIHQHSMIAL 589
Query: 1470 SVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELRELVSLENQLTNQQNG 1649
+V++LP+ SVVS+NPICCSP R DFDGDCLHG++PQS+ +RVEL ELV+L+ QL N Q+G
Sbjct: 590 TVRVLPISSVVSINPICCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDRQLINGQSG 649
Query: 1650 RNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILKGPKCQTPMWTGVQ 1829
NLLSL DSLTA +LL + GV N +Q+QQL+MLC +L+ PAI K P TP W+G Q
Sbjct: 650 GNLLSLSQDSLTAAHLLLEDGVGFNIYQVQQLEMLCNKELTSPAIFKAPSSNTPFWSGKQ 709
Query: 1830 LLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILF 2009
L SMLLP+ FD+ FP ++V++ GE+IS S S WL+D++ N+F SL++ + K LD+L
Sbjct: 710 LFSMLLPSKFDYAFPSNDVFVKDGELISCSESSGWLRDSENNVFQSLVEHFQGKILDVLH 769
Query: 2010 AAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVDPQM 2189
AQ+ L W+SM G +VSLSDLY Y L+ AEQ C QL+VD
Sbjct: 770 GAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMMEEISYGLRVAEQACDFNQLLVDHYS 829
Query: 2190 GYLLSHGEELSTKVH-EVSDPNH-XXXXXXXXXXXVGAFKEVFRDLLNRIIVYGSKDNSL 2363
+L + EE V +V NH V AF+ VFR++ + + KDNS
Sbjct: 830 DFLSASPEENEKFVTVDVDRLNHERQISAAQSQASVDAFRHVFRNIQSLADKHACKDNSF 889
Query: 2364 ISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKNRTISGL--LENSHDI 2537
++M KAGSKG++LKL Q ++CLGLQHS V L +R+P +LS + N + GL +E S D
Sbjct: 890 LAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLSYRIPRELSCAGWN-SQKGLHSMEMSSDT 948
Query: 2538 VDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPGSLTRKLMFYMRDLY 2717
++ S +A+VE SFL GLNP ECFVHS+ RD SFS+NAD+PG+LTR+LMF+MRD+Y
Sbjct: 949 LEPKQSYIAHAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTRRLMFFMRDMY 1008
Query: 2718 MAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF--GAPVGSLAACSISEAAYSALEQ 2891
AYDGTVRN YGNQL+QFSY +D+ R G PVG+L+AC++SEAAYSAL Q
Sbjct: 1009 DAYDGTVRNLYGNQLIQFSYDAEEDSSCDSYFREDIIGGEPVGALSACAVSEAAYSALSQ 1068
Query: 2892 PISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEYVAITIKNNLERVL 3071
PIS+LE SPLL LKN+LE G ++ +++SLFLS+ I + G EY A+ +KN LER +
Sbjct: 1069 PISLLEASPLLNLKNVLECGSRKKGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERYM 1128
Query: 3072 FSDIVSTVIIEFSQQTSDVEFLSPWICHFHISKERVEMKGLTVQSIVDTLNCKCYYSEEV 3251
FS+IVSTV+I F+ Q SPW+CHFH+ KE V + L V SI+D+L +
Sbjct: 1129 FSNIVSTVMIIFTPQHCSQVKYSPWVCHFHLDKENVTRRKLEVHSIIDSLYQQYDSFRRE 1188
Query: 3252 SKANLPKLQILSRD--------------CCIEDAEECG---------GTFCITVSVEISD 3362
SK LP L+I S+ C A E G G CITV+V
Sbjct: 1189 SKVILPSLKISSKSGREVENKEGQTCSKCQDYKANEGGETSVGNEKDGEDCITVAVVEDS 1248
Query: 3363 GSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMSE 3542
++V +++VR ++PFLL+ I+GF+EIKKVDILW DLP + S++ S GEL+L+V MS
Sbjct: 1249 KNSVQLDSVRKSLIPFLLQTAIKGFLEIKKVDILWKDLPKVTKSYNGSAGELYLRVTMSS 1308
Query: 3543 SCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYF 3686
+ W L+N C IM LIDW RSHPD+++ S +GID W+++
Sbjct: 1309 GNDNGTFWGRLINHCHRIMPLIDWTRSHPDNIHHFCSAFGIDAGWQHY 1356
>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031869|gb|ESW30448.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 1011 bits (2614), Expect = 0.0
Identities = 552/1191 (46%), Positives = 759/1191 (63%), Gaps = 23/1191 (1%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MD+ PSG + ++ + VLT DI K SV+EI+A V LG+PN S +C+TC
Sbjct: 1 MDDEFFYGNKAPSGVIRAIKFDVLTENDIEKVSVLEINAAGQVTGSTLGLPNTSDECATC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
+++ K C+GH+G IKFP ++HPYF+SEI ++LN ICP CKS++ + KG+ I
Sbjct: 61 GSKNKKICEGHFGVIKFPFPILHPYFMSEIAQILNKICPVCKSIRH--KSKGAQLIFGIK 118
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
N CKYC+ N RYP MKF+ SS D + IIVEVN++ K+ +L L
Sbjct: 119 RSIN---CKYCSGNGVGRYPAMKFKFSSNDLYRRTA--IIVEVNDKASKK----SLGRSL 169
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P DYWDF+ D QQ E + R LS QV LL D+D FI+K PR N + L CFP+
Sbjct: 170 PADYWDFLPYDAQQEE--NYVNRRVLSPGQVTSLLNDVDPNFIEKYVPRNNLITLNCFPV 227
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVR-DCLNISKLHTVK 1085
TPN RVTE + SNG +L FDDRT+ KKL+D + N+ + D IS ++
Sbjct: 228 TPNCHRVTEVPYAISNGNRLSFDDRTRSCKKLVDFRGTANELSSRLNPDKTPISIFADIQ 287
Query: 1086 PA----NSDSKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISES 1253
N+ + SGL+WIK+V+LGKR D R VVGDPS++ EIGIP I+E L +SE
Sbjct: 288 KKKVAENACNSSGLRWIKDVILGKRNDSTFRTVVVGDPSLELSEIGIPCHIAESLQVSEY 347
Query: 1254 LNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVNR 1433
+N +N KL CC LRL E+G+ +V RK S + + +L++GD YR L +GD +L+NR
Sbjct: 348 VNRQNLEKLLYCCELRLLEKGQINVCRKGSSIHLFKKEDLQIGDQFYRPLCDGDKVLINR 407
Query: 1434 PPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELRELV 1613
PPSIHQHS+IAL+V++LP+ SVV +NP+CCSP R DFDGDCLHG++PQS+ +RVEL ELV
Sbjct: 408 PPSIHQHSMIALTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVSARVELSELV 467
Query: 1614 SLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILKG 1793
+L+ QL N Q+GRNLLSL DSLTA YLL + GV L+ +QMQQL MLC L+ PAI+K
Sbjct: 468 ALDKQLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQMLCNKGLAPPAIVKS 527
Query: 1794 PKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLI 1973
P + W+G QL SMLLP+ FD+ FP D V +S GE++SS S WL+D+D N+F L+
Sbjct: 528 PSSNSSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLV 587
Query: 1974 DKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQT 2153
+ + K+L+ LFAAQ VL W+SM G +VSLSDLY Y LQ+AE+
Sbjct: 588 EHFQGKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQDAEKA 647
Query: 2154 CIIKQLMVDPQMGYLLSHGEELSTKVHEVSDP--NHXXXXXXXXXXXVGAFKEVFRDLLN 2327
C KQL++D +L + EE + +D V AF+ VFR++ +
Sbjct: 648 CNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALSQASVDAFRHVFRNIQS 707
Query: 2328 RIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKNRTI 2507
Y DN+ ++M KAGSK S+++LAQ ++CLG+Q+S V L +R+P LS + N +
Sbjct: 708 LADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVRLSYRLPRHLSCAAWN-SQ 766
Query: 2508 SGL--LENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPGSL 2681
GL ++ ++S S P A+V+ SFL GLNP ECFVHS+ R FSENADVPG+L
Sbjct: 767 KGLDSIQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSVTIRASGFSENADVPGTL 826
Query: 2682 TRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF---GAPVGSLAA 2852
TR+LMF+MRDL+ AYDGTVRN YGNQL+QFSY + D+N D + G PVG+L+A
Sbjct: 827 TRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDI-DENTSCDKSFKEYAIGGEPVGALSA 885
Query: 2853 CSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEY 3032
++SEA YSAL+QP+S+LE SPLL LKN+LE G ++ +S+SLF S+ + + +G EY
Sbjct: 886 SAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSRKKNGDQSVSLFFSEKVGKQRHGFEY 945
Query: 3033 VAITIKNNLERVLFSDIVSTVIIEFS-QQTSDVEFLSPWICHFHISKERVEMKGLTVQSI 3209
A+ +KN LER+LFS IVSTV+I F+ +S +E SPW+CHFH+ KE + + L V SI
Sbjct: 946 AALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEKYSPWVCHFHLDKEILMRRKLKVHSI 1005
Query: 3210 VDTLNCKCYYSEEVSKANLPKLQILS-RDCCIEDAEECGGTF---------CITVSVEIS 3359
+D L + Y K KL+I S R C ++ + G CITV++ +
Sbjct: 1006 IDYLYQRYYSQSTEPKVGFTKLKISSNRKCSVDSTAKEGEDICIDKEDSDDCITVTIVEN 1065
Query: 3360 DGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHDSSCGELFLKVYMS 3539
+ + + +VRDL++PF L I+GFM+IKKVDILWN+ +NS++ S GEL+L+V ++
Sbjct: 1066 SENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWNNQSKGTNSYNGSSGELYLRVTVA 1125
Query: 3540 ESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWEYFMR 3692
S + W +L+N C IM +IDW RSHPD++ + S YGIDVAW+Y+ +
Sbjct: 1126 SSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYK 1176
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 1006 bits (2602), Expect = 0.0
Identities = 552/1203 (45%), Positives = 753/1203 (62%), Gaps = 37/1203 (3%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MD+ +++ PS + ++ + VLT DI SV+EI+A V LG+PN S +C+TC
Sbjct: 1 MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
+D K C+GH+G IKFP ++HPYF+ EI +LN ICP CKS++ + KG+ I T
Sbjct: 61 GTKDKKFCEGHFGVIKFPTPILHPYFMLEIAHILNKICPVCKSIRH--KSKGARLIYGT- 117
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
+ + C YC+V YP M+FR SS D + IIVEV L +
Sbjct: 118 --KRSNDCNYCSV-----YPSMQFRVSSNDLFRRTA--IIVEVKA------SKKTLGTEI 162
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P D+W+FI D QQ E + R LS QV LL D+D FI+K PR N L L CFP+
Sbjct: 163 PADFWNFIPCDAQQEE--NYVNRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCLNCFPV 220
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKP 1088
TPN RVTE + S+G +L FDDRT+ KKL+D + N+ V DCL ISKL+ K
Sbjct: 221 TPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKT 280
Query: 1089 ANSD--------------SKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDI 1226
NS + SGL+WIK+V+LGKR D + R VVGDP ++ EIGIP I
Sbjct: 281 PNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHI 340
Query: 1227 SERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLD 1406
+E L +SE +N +N KL CC L L E+G+ +V RK S+V + +L++GD YR L
Sbjct: 341 AESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLA 400
Query: 1407 EGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIM 1586
+GD +L+NRPPSIHQHS+I+L+V++LP+ SVV +NP+CCSP R DFDGDCLHG++PQS+
Sbjct: 401 DGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVT 460
Query: 1587 SRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDML--CP 1760
+R+EL ELV+L+ QL N Q+GRNLLSL DSLTA YLL + GV LN +QMQQL ML
Sbjct: 461 ARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISN 520
Query: 1761 HQLSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQ 1940
+L PA++K P + +W G QL SMLLP FD+ FP D V +S GE++SSS S WL+
Sbjct: 521 KRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLR 580
Query: 1941 DTDGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXX 2120
D+D N+F SL++ Y K L+ L+AAQ+VL W+SM G +VSLSDLY
Sbjct: 581 DSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEE 640
Query: 2121 XHYALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEVSD--PNHXXXXXXXXXXXVG 2294
Y LQ+AE+ C KQL++D +L +E + +D V
Sbjct: 641 IFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLSQASVD 700
Query: 2295 AFKEVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPC 2474
AF++VFR++ + Y K NS ++M KAGSKG++LKL Q ++CLG+Q+S V L +R+P
Sbjct: 701 AFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPR 760
Query: 2475 KLS-SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISF 2651
LS + ++ ++ S ++S S PYA+VE SFL GLNP ECFVHS+ RD SF
Sbjct: 761 HLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSF 820
Query: 2652 SENADVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF-- 2825
S++AD+PG+LTR+LMF+MRDLY AYDGTVRN YGNQL+QFSY + +D+ GF
Sbjct: 821 SDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNK----GFQQ 876
Query: 2826 ----GAPVGSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFL 2993
G VG+++AC+ISEAAYSAL QP+S+LETSPLL LKN+LE G ++ +++SLFL
Sbjct: 877 YALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFL 936
Query: 2994 SKDIERWLYGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTS-DVEFLSPWICHFHISK 3170
S+ + + +G EY A+ +KN LER+LFS+IVS V+I F+ S E SPW+CHFH+ K
Sbjct: 937 SEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDK 996
Query: 3171 ERVEMKGLTVQSIVDTLNCKCYYSEEVSKANLPKLQILSRDCCIE-----------DAEE 3317
E V + L V SI+D+L + Y + SK L+I SR C + D EE
Sbjct: 997 EIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSRKCSADSMVKEGEDTSIDKEE 1056
Query: 3318 CGGTFCITVSVEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSH 3497
G CI V++ + + + +++VRDLV+PFLL I+GF+++KKVDILWN+ +NS
Sbjct: 1057 --GDDCIMVTIVENSKNPIQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQSKVTNSR 1114
Query: 3498 DSSCGELFLKVYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAW 3677
+ GEL+L+V +S + W +LL C IMH+IDW RSH D++ S YGID W
Sbjct: 1115 NGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGW 1174
Query: 3678 EYF 3686
+YF
Sbjct: 1175 QYF 1177
>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Glycine max]
Length = 1455
Score = 1003 bits (2593), Expect = 0.0
Identities = 549/1202 (45%), Positives = 753/1202 (62%), Gaps = 36/1202 (2%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MD+ +++ PS + ++ + VLT DI SV+EI+A V LG+PN S +C+TC
Sbjct: 1 MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
+D K C+GH+G IKFP ++HPYF+ EI +LN ICP CKS++ + KG+ I T
Sbjct: 61 GTKDKKFCEGHFGVIKFPTPILHPYFMLEIAHILNKICPVCKSIRH--KSKGARLIYGT- 117
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
+ + C YC+V YP M+FR SS D + IIVEV L +
Sbjct: 118 --KRSNDCNYCSV-----YPSMQFRVSSNDLFRRTA--IIVEVKA------SKKTLGTEI 162
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P D+W+FI D QQ E + R LS QV LL D+D FI+K PR N L L CFP+
Sbjct: 163 PADFWNFIPCDAQQEE--NYVNRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCLNCFPV 220
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKP 1088
TPN RVTE + S+G +L FDDRT+ KKL+D + N+ V DCL ISKL+ K
Sbjct: 221 TPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKT 280
Query: 1089 ANSD--------------SKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDI 1226
NS + SGL+WIK+V+LGKR D + R VVGDP ++ EIGIP I
Sbjct: 281 PNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHI 340
Query: 1227 SERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLD 1406
+E L +SE +N +N KL CC L L E+G+ +V RK S+V + +L++GD YR L
Sbjct: 341 AESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLA 400
Query: 1407 EGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIM 1586
+GD +L+NRPPSIHQHS+I+L+V++LP+ SVV +NP+CCSP R DFDGDCLHG++PQS+
Sbjct: 401 DGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVT 460
Query: 1587 SRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDML--CP 1760
+R+EL ELV+L+ QL N Q+GRNLLSL DSLTA YLL + GV LN +QMQQL ML
Sbjct: 461 ARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISN 520
Query: 1761 HQLSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQ 1940
+L PA++K P + +W G QL SMLLP FD+ FP D V +S GE++SSS S WL+
Sbjct: 521 KRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLR 580
Query: 1941 DTDGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXX 2120
D+D N+F SL++ Y K L+ L+AAQ+VL W+SM G +VSLSDLY
Sbjct: 581 DSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEE 640
Query: 2121 XHYALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEVSD--PNHXXXXXXXXXXXVG 2294
Y LQ+AE+ C KQL++D +L +E + +D V
Sbjct: 641 IFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLSQASVD 700
Query: 2295 AFKEVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPC 2474
AF++VFR++ + Y K NS ++M KAGSKG++LKL Q ++CLG+Q+S V L +R+P
Sbjct: 701 AFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPR 760
Query: 2475 KLS-SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISF 2651
LS + ++ ++ S ++S S PYA+VE SFL GLNP ECFVHS+ RD SF
Sbjct: 761 HLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSF 820
Query: 2652 SENADVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF-- 2825
S++AD+PG+LTR+LMF+MRDLY AYDGTVRN YGNQL+QFSY + +D+ GF
Sbjct: 821 SDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNK----GFQQ 876
Query: 2826 ----GAPVGSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFL 2993
G VG+++AC+ISEAAYSAL QP+S+LETSPLL LKN+LE G ++ +++SLFL
Sbjct: 877 YALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFL 936
Query: 2994 SKDIERWLYGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTS-DVEFLSPWICHFHISK 3170
S+ + + +G EY A+ +KN LER+LFS+IVS V+I F+ S E SPW+CHFH+ K
Sbjct: 937 SEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDK 996
Query: 3171 ERVEMKGLTVQSIVDTLNCKCYYSEEVSKANLPKLQI-----LSRDCCIEDAEECG---- 3323
E V + L V SI+D+L + Y + SK L+I S D +++ E+
Sbjct: 997 EIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGEDTSIDKE 1056
Query: 3324 -GTFCITVSVEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHD 3500
G CI V++ + + + +++VRDLV+PFLL I+GF+++KKVDILWN+ +NS +
Sbjct: 1057 EGDDCIMVTIVENSKNPIQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQSKVTNSRN 1116
Query: 3501 SSCGELFLKVYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWE 3680
GEL+L+V +S + W +LL C IMH+IDW RSH D++ S YGID W+
Sbjct: 1117 GFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQ 1176
Query: 3681 YF 3686
YF
Sbjct: 1177 YF 1178
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 1003 bits (2593), Expect = 0.0
Identities = 549/1202 (45%), Positives = 753/1202 (62%), Gaps = 36/1202 (2%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MD+ +++ PS + ++ + VLT DI SV+EI+A V LG+PN S +C+TC
Sbjct: 1 MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
+D K C+GH+G IKFP ++HPYF+ EI +LN ICP CKS++ + KG+ I T
Sbjct: 61 GTKDKKFCEGHFGVIKFPTPILHPYFMLEIAHILNKICPVCKSIRH--KSKGARLIYGT- 117
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
+ + C YC+V YP M+FR SS D + IIVEV L +
Sbjct: 118 --KRSNDCNYCSV-----YPSMQFRVSSNDLFRRTA--IIVEVKA------SKKTLGTEI 162
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P D+W+FI D QQ E + R LS QV LL D+D FI+K PR N L L CFP+
Sbjct: 163 PADFWNFIPCDAQQEE--NYVNRRVLSPVQVNYLLNDVDPDFIEKYIPRKNLLCLNCFPV 220
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKP 1088
TPN RVTE + S+G +L FDDRT+ KKL+D + N+ V DCL ISKL+ K
Sbjct: 221 TPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKT 280
Query: 1089 ANSD--------------SKSGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDI 1226
NS + SGL+WIK+V+LGKR D + R VVGDP ++ EIGIP I
Sbjct: 281 PNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCHI 340
Query: 1227 SERLLISESLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLD 1406
+E L +SE +N +N KL CC L L E+G+ +V RK S+V + +L++GD YR L
Sbjct: 341 AESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPLA 400
Query: 1407 EGDVLLVNRPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIM 1586
+GD +L+NRPPSIHQHS+I+L+V++LP+ SVV +NP+CCSP R DFDGDCLHG++PQS+
Sbjct: 401 DGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVT 460
Query: 1587 SRVELRELVSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDML--CP 1760
+R+EL ELV+L+ QL N Q+GRNLLSL DSLTA YLL + GV LN +QMQQL ML
Sbjct: 461 ARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISN 520
Query: 1761 HQLSCPAILKGPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQ 1940
+L PA++K P + +W G QL SMLLP FD+ FP D V +S GE++SSS S WL+
Sbjct: 521 KRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLR 580
Query: 1941 DTDGNIFCSLIDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXX 2120
D+D N+F SL++ Y K L+ L+AAQ+VL W+SM G +VSLSDLY
Sbjct: 581 DSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSYARENMIEE 640
Query: 2121 XHYALQEAEQTCIIKQLMVDPQMGYLLSHGEELSTKVHEVSD--PNHXXXXXXXXXXXVG 2294
Y LQ+AE+ C KQL++D +L +E + +D V
Sbjct: 641 IFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISASLSQASVD 700
Query: 2295 AFKEVFRDLLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPC 2474
AF++VFR++ + Y K NS ++M KAGSKG++LKL Q ++CLG+Q+S V L +R+P
Sbjct: 701 AFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPR 760
Query: 2475 KLS-SSMKNRTISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISF 2651
LS + ++ ++ S ++S S PYA+VE SFL GLNP ECFVHS+ RD SF
Sbjct: 761 HLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSF 820
Query: 2652 SENADVPGSLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGVGDDNIIQDTGRCGF-- 2825
S++AD+PG+LTR+LMF+MRDLY AYDGTVRN YGNQL+QFSY + +D+ GF
Sbjct: 821 SDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNK----GFQQ 876
Query: 2826 ----GAPVGSLAACSISEAAYSALEQPISILETSPLLCLKNILESGPKRSIASRSLSLFL 2993
G VG+++AC+ISEAAYSAL QP+S+LETSPLL LKN+LE G ++ +++SLFL
Sbjct: 877 YALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFL 936
Query: 2994 SKDIERWLYGPEYVAITIKNNLERVLFSDIVSTVIIEFSQQTS-DVEFLSPWICHFHISK 3170
S+ + + +G EY A+ +KN LER+LFS+IVS V+I F+ S E SPW+CHFH+ K
Sbjct: 937 SEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQEKYSPWVCHFHLDK 996
Query: 3171 ERVEMKGLTVQSIVDTLNCKCYYSEEVSKANLPKLQI-----LSRDCCIEDAEECG---- 3323
E V + L V SI+D+L + Y + SK L+I S D +++ E+
Sbjct: 997 EIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADSMVKEGEDTSIDKE 1056
Query: 3324 -GTFCITVSVEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDILWNDLPITSNSHD 3500
G CI V++ + + + +++VRDLV+PFLL I+GF+++KKVDILWN+ +NS +
Sbjct: 1057 EGDDCIMVTIVENSKNPIQLDSVRDLVIPFLLGTAIQGFLDVKKVDILWNNQSKVTNSRN 1116
Query: 3501 SSCGELFLKVYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLYDIFSIYGIDVAWE 3680
GEL+L+V +S + W +LL C IMH+IDW RSH D++ S YGID W+
Sbjct: 1117 GFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNINHFSSAYGIDAGWQ 1176
Query: 3681 YF 3686
YF
Sbjct: 1177 YF 1178
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 999 bits (2584), Expect = 0.0
Identities = 523/937 (55%), Positives = 659/937 (70%), Gaps = 19/937 (2%)
Frame = +3
Query: 189 MDNGIIREQDVPSGRLISMSYSVLTGADILKFSVIEIDAVNDVINPKLGVPNLSSQCSTC 368
MDN + EQ VPSG LI + + V T D+ K SV++IDAVN++ +PKLGVPN S QCSTC
Sbjct: 1 MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60
Query: 369 SARDIKSCDGHYGAIKFPVGVIHPYFISEIVRMLNTICPGCKSVKEDFRIKGSTSISRTS 548
A+D K C+GH+G IKFP ++HPYF++E+V++LN ICPGCKS ++ +KG+ S SR
Sbjct: 61 GAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRRL 120
Query: 549 TPENNQPCKYCAVNPFRRYPRMKFRASSKDSSGKNVSEIIVEVNERLLKEFQSINLSEVL 728
++ CKYCA N YP MKF+ SSKD K IIVE+NE+L K+ Q + VL
Sbjct: 121 ---RSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTA--IIVEMNEKLPKKLQKKSFRPVL 175
Query: 729 PVDYWDFIQKDPQQVEPCSSPTMRTLSAAQVYLLLRDIDLKFIKKLAPRPNSLFLTCFPI 908
P+DYWDFI KDPQQ E C +P R LS AQV+ LL+DID FIK+ R +S FL C P+
Sbjct: 176 PLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCLPV 235
Query: 909 TPNSSRVTESIHGFSNGPKLIFDDRTKVYKKLLDHKTPKNDFGLHVRDCLNISKLHTVKP 1088
TPN+ RVTE H SNG LIFD ++ YKKL+D + N+ V DCL SK ++
Sbjct: 236 TPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKASNLRS 295
Query: 1089 ANSDSK------SGLKWIKEVLLGKRTDYALRMTVVGDPSIKFCEIGIPRDISERLLISE 1250
S SK SGLKWIKEVLLGKRT+++ RM VVGDP ++ EIGIP I+E LLISE
Sbjct: 296 EKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISE 355
Query: 1251 SLNSRNWVKLNACCNLRLFERGEFHVRRKDSLVCIRHTHELELGDVVYRHLDEGDVLLVN 1430
LNS NW K+ CNLRL E+G+ +VRRK +L +R ++ + GD++YR L +GD++L+N
Sbjct: 356 HLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLIN 415
Query: 1431 RPPSIHQHSLIALSVKILPVDSVVSLNPICCSPFRADFDGDCLHGFVPQSIMSRVELREL 1610
RPPSIHQHS+IALSVK+LP++SVVS+NP+CCSPFR DFDGDCLHG++PQS+ SRVEL EL
Sbjct: 416 RPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSEL 475
Query: 1611 VSLENQLTNQQNGRNLLSLCHDSLTAIYLLRKKGVSLNRFQMQQLDMLCPHQLSCPAILK 1790
V+L QL N+Q+GRNLLSL DSL+A +L+ + GV LN FQMQQL+M CP+QL PAI+K
Sbjct: 476 VALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIK 535
Query: 1791 GPKCQTPMWTGVQLLSMLLPNCFDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSL 1970
P T +WTG QL SMLLP F++VFPL+ V IS GE+ISSS GS+WL+D DGN+F SL
Sbjct: 536 APLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSL 595
Query: 1971 IDKYGYKALDILFAAQEVLLGWISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQ 2150
+ KALD L+AAQEVL W+SMRGL+VSLSD+Y L AEQ
Sbjct: 596 VKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQ 655
Query: 2151 TCIIKQLMVDPQMGYLLSHGEELSTKVHEVSDPN----HXXXXXXXXXXXVGAFKEVFRD 2318
TC KQL+VD +L+ GE V V D V AFK+ FRD
Sbjct: 656 TCHFKQLLVDSSQNFLIGSGENNQNGV--VPDVQSLWYERQGSAALCQSSVCAFKQKFRD 713
Query: 2319 LLNRIIVYGSKDNSLISMLKAGSKGSMLKLAQQTLCLGLQHSSVPLPFRVPCKLSSSMKN 2498
+ N + Y +KDNSL++MLKAGSKG++LKL QQ LCLGLQHS VPL F++P +LS + N
Sbjct: 714 IQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWN 773
Query: 2499 R-TISGLLENSHDIVDSAGSNFPYAIVEDSFLDGLNPTECFVHSLACRDISFSENADVPG 2675
+ + GL++N D + A S PYA+VE+SFL GLNP ECFVHS+ RD SFS+NAD+PG
Sbjct: 774 KQKVPGLIQN--DTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPG 831
Query: 2676 SLTRKLMFYMRDLYMAYDGTVRNAYGNQLLQFSYGV-----GDDNIIQDTGRCGF---GA 2831
+LTR+LMF+MRDLY+AYDGTVRNAYGNQL+QFSY + D I +DT C + G
Sbjct: 832 TLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGINEDT--CAYDMGGQ 889
Query: 2832 PVGSLAACSISEAAYSALEQPISILETSPLLCLKNIL 2942
PVGS++AC+ISEAAYSAL+QPIS+LE SPLL LKN L
Sbjct: 890 PVGSISACAISEAAYSALDQPISLLEPSPLLNLKNHL 926
Score = 265 bits (677), Expect = 1e-67
Identities = 127/256 (49%), Positives = 179/256 (69%)
Frame = +3
Query: 2922 LCLKNILESGPKRSIASRSLSLFLSKDIERWLYGPEYVAITIKNNLERVLFSDIVSTVII 3101
L L+ +LE G ++S A R++SLFLSK +E+ +G EY A+ +KN+LE++LFSDIVSTV+I
Sbjct: 1065 LILQRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMI 1124
Query: 3102 EFSQQTSDVEFLSPWICHFHISKERVEMKGLTVQSIVDTLNCKCYYSEEVSKANLPKLQI 3281
FS Q SPW+CHFH+ +E + + L SI+D L KC + SK NLP LQI
Sbjct: 1125 VFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQI 1184
Query: 3282 LSRDCCIEDAEECGGTFCITVSVEISDGSAVLMETVRDLVVPFLLRMVIRGFMEIKKVDI 3461
S+DC ++ +E FCITVS+ S S + ++TVRDLV+PFLL V++G +++KKVDI
Sbjct: 1185 TSKDCFVDMEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDI 1244
Query: 3462 LWNDLPITSNSHDSSCGELFLKVYMSESCEIRKCWNLLLNECLHIMHLIDWKRSHPDDLY 3641
LWND P S+ SS G L+L+VY+S C + W +L++ CL IM +IDW+RSHPD+++
Sbjct: 1245 LWNDNP-DSDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIH 1303
Query: 3642 DIFSIYGIDVAWEYFM 3689
DIF +YGID W+YF+
Sbjct: 1304 DIFVVYGIDAGWKYFL 1319