BLASTX nr result
ID: Cocculus23_contig00009712
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00009712
(217 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr... 126 3e-27
emb|CBI34367.3| unnamed protein product [Vitis vinifera] 126 3e-27
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 126 3e-27
ref|XP_007160091.1| hypothetical protein PHAVU_002G291500g [Phas... 123 2e-26
ref|XP_007040304.1| Xeroderma pigmentosum complementation group ... 123 2e-26
ref|XP_007040303.1| Xeroderma pigmentosum complementation group ... 123 2e-26
ref|XP_007040302.1| Xeroderma pigmentosum complementation group ... 123 2e-26
ref|XP_007040301.1| Xeroderma pigmentosum complementation group ... 123 2e-26
ref|XP_006283168.1| hypothetical protein CARUB_v10004199mg [Caps... 123 3e-26
ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 122 4e-26
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 122 4e-26
ref|XP_006439502.1| hypothetical protein CICLE_v100190881mg, par... 122 5e-26
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So... 121 9e-26
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So... 121 9e-26
gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japo... 121 9e-26
gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indi... 121 9e-26
ref|NP_001043936.1| Os01g0691600 [Oryza sativa Japonica Group] g... 121 9e-26
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]... 121 1e-25
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso... 121 1e-25
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido... 121 1e-25
>ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum]
gi|557106496|gb|ESQ46811.1| hypothetical protein
EUTSA_v10027651mg [Eutrema salsugineum]
Length = 769
Score = 126 bits (317), Expect = 3e-27
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFIYASTANYGKVKLVLKKNRYF+ESPFPEVLKTL
Sbjct: 120 VGLETETIISVLNKLSKTKLPKEMIDFIYASTANYGKVKLVLKKNRYFIESPFPEVLKTL 179
Query: 37 LKDEAISRARIS 2
L D ISRAR S
Sbjct: 180 LSDGVISRARFS 191
>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
Length = 850
Score = 126 bits (317), Expect = 3e-27
Identities = 62/72 (86%), Positives = 70/72 (97%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI+ VL+KLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYFVESPFPEVLKTL
Sbjct: 120 VGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTL 179
Query: 37 LKDEAISRARIS 2
L+DE ISR+RIS
Sbjct: 180 LRDEVISRSRIS 191
>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
Length = 771
Score = 126 bits (317), Expect = 3e-27
Identities = 62/72 (86%), Positives = 70/72 (97%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI+ VL+KLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYFVESPFPEVLKTL
Sbjct: 120 VGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTL 179
Query: 37 LKDEAISRARIS 2
L+DE ISR+RIS
Sbjct: 180 LRDEVISRSRIS 191
>ref|XP_007160091.1| hypothetical protein PHAVU_002G291500g [Phaseolus vulgaris]
gi|561033506|gb|ESW32085.1| hypothetical protein
PHAVU_002G291500g [Phaseolus vulgaris]
Length = 768
Score = 123 bits (309), Expect = 2e-26
Identities = 60/71 (84%), Positives = 69/71 (97%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+T+++VLNKLSKTKLPK+MI FI+ STANYGKVKLVLKKNRYFVESPFPEVLKTL
Sbjct: 119 VGLETETVISVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTL 178
Query: 37 LKDEAISRARI 5
L+D+AISRARI
Sbjct: 179 LRDDAISRARI 189
>ref|XP_007040304.1| Xeroderma pigmentosum complementation group B 2 isoform 4, partial
[Theobroma cacao] gi|508777549|gb|EOY24805.1| Xeroderma
pigmentosum complementation group B 2 isoform 4, partial
[Theobroma cacao]
Length = 641
Score = 123 bits (309), Expect = 2e-26
Identities = 59/72 (81%), Positives = 70/72 (97%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 120 VGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKL 179
Query: 37 LKDEAISRARIS 2
L+D+ I+RARI+
Sbjct: 180 LQDDVIARARIA 191
>ref|XP_007040303.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
[Theobroma cacao] gi|508777548|gb|EOY24804.1| Xeroderma
pigmentosum complementation group B 2 isoform 3, partial
[Theobroma cacao]
Length = 742
Score = 123 bits (309), Expect = 2e-26
Identities = 59/72 (81%), Positives = 70/72 (97%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 141 VGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKL 200
Query: 37 LKDEAISRARIS 2
L+D+ I+RARI+
Sbjct: 201 LQDDVIARARIA 212
>ref|XP_007040302.1| Xeroderma pigmentosum complementation group B 2 isoform 2, partial
[Theobroma cacao] gi|508777547|gb|EOY24803.1| Xeroderma
pigmentosum complementation group B 2 isoform 2, partial
[Theobroma cacao]
Length = 809
Score = 123 bits (309), Expect = 2e-26
Identities = 59/72 (81%), Positives = 70/72 (97%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 141 VGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKL 200
Query: 37 LKDEAISRARIS 2
L+D+ I+RARI+
Sbjct: 201 LQDDVIARARIA 212
>ref|XP_007040301.1| Xeroderma pigmentosum complementation group B 1 isoform 1
[Theobroma cacao] gi|508777546|gb|EOY24802.1| Xeroderma
pigmentosum complementation group B 1 isoform 1
[Theobroma cacao]
Length = 771
Score = 123 bits (309), Expect = 2e-26
Identities = 59/72 (81%), Positives = 70/72 (97%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 120 VGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKL 179
Query: 37 LKDEAISRARIS 2
L+D+ I+RARI+
Sbjct: 180 LQDDVIARARIA 191
>ref|XP_006283168.1| hypothetical protein CARUB_v10004199mg [Capsella rubella]
gi|482551873|gb|EOA16066.1| hypothetical protein
CARUB_v10004199mg [Capsella rubella]
Length = 768
Score = 123 bits (308), Expect = 3e-26
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 120 VGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL 179
Query: 37 LKDEAISRARIS 2
L DE I+RAR S
Sbjct: 180 LSDEDINRARFS 191
>ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum]
Length = 765
Score = 122 bits (307), Expect = 4e-26
Identities = 60/72 (83%), Positives = 69/72 (95%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MI FI+ STANYGKVKLVLKKNRYFVESPFPEVLKTL
Sbjct: 116 VGLETETIISVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTL 175
Query: 37 LKDEAISRARIS 2
L+D+ ISRARI+
Sbjct: 176 LRDDGISRARIT 187
>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
helicase, putative [Ricinus communis]
Length = 768
Score = 122 bits (307), Expect = 4e-26
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFI+ STANYGKVKLVLKKNRY VESPFPEVLK L
Sbjct: 118 VGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRL 177
Query: 37 LKDEAISRARI 5
LKDE ISRAR+
Sbjct: 178 LKDEVISRARL 188
>ref|XP_006439502.1| hypothetical protein CICLE_v100190881mg, partial [Citrus
clementina] gi|557541764|gb|ESR52742.1| hypothetical
protein CICLE_v100190881mg, partial [Citrus clementina]
Length = 435
Score = 122 bits (306), Expect = 5e-26
Identities = 60/71 (84%), Positives = 68/71 (95%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRY VESPFPEVLK L
Sbjct: 126 VGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYLVESPFPEVLKRL 185
Query: 37 LKDEAISRARI 5
L+D+ ISRARI
Sbjct: 186 LQDDVISRARI 196
>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
Length = 768
Score = 121 bits (304), Expect = 9e-26
Identities = 59/72 (81%), Positives = 68/72 (94%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI+ VL+KLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 122 VGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL 181
Query: 37 LKDEAISRARIS 2
L D+AI +ARIS
Sbjct: 182 LADDAIGKARIS 193
>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
Length = 768
Score = 121 bits (304), Expect = 9e-26
Identities = 59/72 (81%), Positives = 68/72 (94%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI+ VL+KLSKTKLPK+MIDFI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 122 VGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL 181
Query: 37 LKDEAISRARIS 2
L D+AI +ARIS
Sbjct: 182 LADDAIGKARIS 193
>gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japonica Group]
Length = 766
Score = 121 bits (304), Expect = 9e-26
Identities = 59/72 (81%), Positives = 69/72 (95%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T TI++V++KLSKTKLP+++IDFI+ASTANYGKVKLVLKKNRYFVESPFPEVLKTL
Sbjct: 119 VGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTL 178
Query: 37 LKDEAISRARIS 2
LKD+ I RARIS
Sbjct: 179 LKDDIICRARIS 190
>gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indica Group]
Length = 766
Score = 121 bits (304), Expect = 9e-26
Identities = 59/72 (81%), Positives = 69/72 (95%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T TI++V++KLSKTKLP+++IDFI+ASTANYGKVKLVLKKNRYFVESPFPEVLKTL
Sbjct: 119 VGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTL 178
Query: 37 LKDEAISRARIS 2
LKD+ I RARIS
Sbjct: 179 LKDDIICRARIS 190
>ref|NP_001043936.1| Os01g0691600 [Oryza sativa Japonica Group]
gi|113533467|dbj|BAF05850.1| Os01g0691600 [Oryza sativa
Japonica Group]
Length = 580
Score = 121 bits (304), Expect = 9e-26
Identities = 59/72 (81%), Positives = 69/72 (95%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T TI++V++KLSKTKLP+++IDFI+ASTANYGKVKLVLKKNRYFVESPFPEVLKTL
Sbjct: 119 VGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTL 178
Query: 37 LKDEAISRARIS 2
LKD+ I RARIS
Sbjct: 179 LKDDIICRARIS 190
>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
AltName: Full=Protein araXPB; AltName: Full=RAD25
homolog 1; Short=AtXPB1; AltName: Full=XPB homolog 1
gi|11771735|gb|AAC49987.2| putative DNA repair protein
and transcription factor [Arabidopsis thaliana]
gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
[Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
repair helicase XPB1 [Arabidopsis thaliana]
Length = 767
Score = 121 bits (303), Expect = 1e-25
Identities = 58/72 (80%), Positives = 68/72 (94%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MI+FI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 119 VGLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL 178
Query: 37 LKDEAISRARIS 2
L D+ I+RAR S
Sbjct: 179 LSDDVINRARFS 190
>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 121 bits (303), Expect = 1e-25
Identities = 57/71 (80%), Positives = 68/71 (95%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+T+++VLNKLSKTKLPK+M+ FI+ STANYGKVKLVLKKNRYF+ESPFPEVLKTL
Sbjct: 119 VGLETETVISVLNKLSKTKLPKEMVKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTL 178
Query: 37 LKDEAISRARI 5
L+DE ISR+RI
Sbjct: 179 LRDETISRSRI 189
>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
Length = 767
Score = 121 bits (303), Expect = 1e-25
Identities = 58/72 (80%), Positives = 68/72 (94%)
Frame = -1
Query: 217 VGLDTDTIVTVLNKLSKTKLPKDMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKTL 38
VGL+T+TI++VLNKLSKTKLPK+MI+FI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK L
Sbjct: 119 VGLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL 178
Query: 37 LKDEAISRARIS 2
L D+ I+RAR S
Sbjct: 179 LSDDVINRARFS 190