BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00009619
         (2448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   740   0.0  
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...   732   0.0  
ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...   729   0.0  
ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplast...   722   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...   712   0.0  
ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplast...   715   0.0  
ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|50...   715   0.0  
ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplast...   707   0.0  
ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplast...   701   0.0  
ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [A...   694   0.0  
gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Mimulus...   705   0.0  
ref|XP_007153283.1| hypothetical protein PHAVU_003G022300g [Phas...   699   0.0  
ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplast...   696   0.0  
ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus...   697   0.0  
ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplast...   697   0.0  
ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplast...   678   0.0  
ref|XP_002463658.1| hypothetical protein SORBIDRAFT_01g003750 [S...   688   0.0  
gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]        681   0.0  
ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana] gi|...   690   0.0  
gb|AAG51377.1|AC011560_9 putative DNA gyrase subunit A; 1114-760...   690   0.0  

>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score =  740 bits (1911), Expect(2) = 0.0
 Identities = 382/488 (78%), Positives = 416/488 (85%), Gaps = 1/488 (0%)
 Frame = +2

Query: 230  LSPLIPSTMAFSARLGFTT-SSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXX 406
            + P    T  F   + F+  SSL+R++ S  L              S LRFLS       
Sbjct: 1    MKPYFTPTALFHPPMAFSAASSLLRHQFSLPLHHRL----------SYLRFLSVTAPPRK 50

Query: 407  XXXXXXXEETVSEERGGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLG 586
                      V   R   +EGNGSLVLKE+ GRDG+IVP ELHKEATEAYMAYAMSVLLG
Sbjct: 51   P-------HLVRARRRDDEEGNGSLVLKEKDGRDGRIVPTELHKEATEAYMAYAMSVLLG 103

Query: 587  RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVR 766
            RALPDVRDGLKPVHRRILFAMHELGLSSRKP+KKCARVVGEVLGKFHPHGDTAVYD+LVR
Sbjct: 104  RALPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVR 163

Query: 767  MAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFD 946
            MAQDFS+R PLI+GHGNFGS+DADPPAAMRYTECRLE LTEAMLL DL QDTVDF+PNFD
Sbjct: 164  MAQDFSLRCPLIQGHGNFGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFD 223

Query: 947  NSQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE 1126
            NSQKEP+LLPAR+PTLLLNGSSGIAVGMATNIPPHN+GELVD L VLI NPEATLQELLE
Sbjct: 224  NSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLE 283

Query: 1127 CMPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTN 1306
             MPGPDFPTGGLIMGN GILEAYR+G+GRI+VRGKT+VELLDSKTKRTAVIIKE+PYQTN
Sbjct: 284  YMPGPDFPTGGLIMGNIGILEAYRTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTN 343

Query: 1307 KSALVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSS 1486
            KS+LVEKIAELVENKS++GISDIRDESDR+GMRIVIELKRGSD SIVLN LYRLTALQSS
Sbjct: 344  KSSLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSS 403

Query: 1487 FSCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQN 1666
            FSCNM+GILDGQPKLMGLKELLQAFLDFRCSV+ERRARFKLS AQER+HIVEGI+VGL N
Sbjct: 404  FSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLDN 463

Query: 1667 VDGVYELL 1690
            +D V  ++
Sbjct: 464  LDAVIRVI 471



 Score =  385 bits (990), Expect(2) = 0.0
 Identities = 193/257 (75%), Positives = 226/257 (87%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IR+I+E+ +N +AS  LR E+GLSE+QAEA+LDI+LR++T LE +KFV E K L EQISK
Sbjct: 468  IRVIKEAPSNAMASTGLRNEFGLSERQAEAILDISLRRITRLEREKFVTESKSLMEQISK 527

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+ QILQ+IE+EAIELKN+F+T RR             +DVIPNEEMLLA+SEK
Sbjct: 528  LQELLSSRKQILQLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLLAVSEK 587

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP+TFNLQNRGTIGKSVG +RVND MSDF+VCHAHD+VLYFSDRG+V+SARAYK
Sbjct: 588  GYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGIVHSARAYK 647

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPEC+RTAAGTPLVQIL L+DGERITSIIPVSEF EDQ+L+MLTMNGYIKKVSLN+FS+I
Sbjct: 648  IPECTRTAAGTPLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNGYIKKVSLNFFSSI 707

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGDELK
Sbjct: 708  RSTGIIAIQLVPGDELK 724


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score =  732 bits (1889), Expect(2) = 0.0
 Identities = 376/477 (78%), Positives = 415/477 (87%), Gaps = 5/477 (1%)
 Frame = +2

Query: 275  GFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXX----EETVS 442
            G   S L+R++L+  L S+    +R   G SELRFLST                 +E V 
Sbjct: 6    GLRISYLLRHQLAPPLVSN--RFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRRDEPVK 63

Query: 443  EERGGGDEGNGSL-VLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLK 619
            +E   G +GNGS+ V K+  G DG+IV   LHKEAT+AYMAYAMSVLLGRALPDVRDGLK
Sbjct: 64   DEGDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRDGLK 123

Query: 620  PVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPL 799
            PVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PL
Sbjct: 124  PVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPL 183

Query: 800  IRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPA 979
            I+GHGNFGSIDADPPAAMRYTECRLE L+EAMLL DL  +TVDFVPNFDNSQKEP+LLPA
Sbjct: 184  IQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSLLPA 243

Query: 980  RIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGG 1159
            R+PTLLLNGSSGIAVGMATNIPPHNLGE+VDAL VLIHNPEATLQELLE MPGPDFPTGG
Sbjct: 244  RLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDFPTGG 303

Query: 1160 LIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAEL 1339
            LIMGN GILEAYR+G+GRI VRGKT+VELLDSKTKRTAVIIKE+PYQTNKSALVE+IAEL
Sbjct: 304  LIMGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVERIAEL 363

Query: 1340 VENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDG 1519
            VENK+++GISDIRDESDRTGMRIVIELKRG+D SIV NNLYRLT+LQSSFSCNMVGI++G
Sbjct: 364  VENKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMVGIING 423

Query: 1520 QPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYELL 1690
            QPKLMGLKELLQAFLDFRCSV+ERRARFKL HAQER+HIVEGI++GL N+DGV  L+
Sbjct: 424  QPKLMGLKELLQAFLDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIRLI 480



 Score =  371 bits (953), Expect(2) = 0.0
 Identities = 190/257 (73%), Positives = 219/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IR+IRE+S+++IASA+LR ++ LSEKQAEA+LDI LR+LT LE KKF+DE K L E ISK
Sbjct: 477  IRLIREASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISK 536

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+N ILQ+IE+EA ELK+KF   RR             IDVIPNEEMLLA SEK
Sbjct: 537  LEELLSSRNNILQLIEQEATELKDKFPNPRRSVLEDTDSGQVEDIDVIPNEEMLLAFSEK 596

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP+TFNLQ+RGTIGKSVG +RVND MSDF+VC AHDHVLYFSD+G+VYSARAYK
Sbjct: 597  GYVKRMKPNTFNLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYSARAYK 656

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPEC RTAAGTPLVQ+LSL+DGERITSIIPVSEF  DQ+L+MLT  GYIKKVSLN+FS+I
Sbjct: 657  IPECGRTAAGTPLVQVLSLSDGERITSIIPVSEFEGDQFLLMLTAYGYIKKVSLNFFSSI 716

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLV GDELK
Sbjct: 717  RSTGIIAIQLVSGDELK 733


>ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
            chloroplastic/mitochondrial-like, partial [Cucumis
            sativus]
          Length = 799

 Score =  729 bits (1882), Expect(2) = 0.0
 Identities = 375/477 (78%), Positives = 414/477 (86%), Gaps = 5/477 (1%)
 Frame = +2

Query: 275  GFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXX----EETVS 442
            G   S L+R++L+  L S+    +R   G SELRFLST                 +E V 
Sbjct: 6    GLRISYLLRHQLAPPLVSN--RFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRRDEPVK 63

Query: 443  EERGGGDEGNGSL-VLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLK 619
            +E   G +GNGS+ V K+  G DG+IV   LHKEAT+AYMAYAMSVLLGRALPDVRDGLK
Sbjct: 64   DEGDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRDGLK 123

Query: 620  PVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPL 799
            PVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PL
Sbjct: 124  PVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPL 183

Query: 800  IRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPA 979
            I+GH NFGSIDADPPAAMRYTECRLE L+EAMLL DL  +TVDFVPNFDNSQKEP+LLPA
Sbjct: 184  IQGHXNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSLLPA 243

Query: 980  RIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGG 1159
            R+PTLLLNGSSGIAVGMATNIPPHNLGE+VDAL VLIHNPEATLQELLE MPGPDFPTGG
Sbjct: 244  RLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDFPTGG 303

Query: 1160 LIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAEL 1339
            LIMGN GILEAYR+G+GRI VRGKT+VELLDSKTKRTAVIIKE+PYQTNKSALVE+IAEL
Sbjct: 304  LIMGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVERIAEL 363

Query: 1340 VENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDG 1519
            VENK+++GISDIRDESDRTGMRIVIELKRG+D SIV NNLYRLT+LQSSFSCNMVGI++G
Sbjct: 364  VENKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMVGIING 423

Query: 1520 QPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYELL 1690
            QPKLMGLKELLQAFLDFRCSV+ERRARFKL HAQER+HIVEGI++GL N+DGV  L+
Sbjct: 424  QPKLMGLKELLQAFLDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIRLI 480



 Score =  371 bits (953), Expect(2) = 0.0
 Identities = 190/257 (73%), Positives = 219/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IR+IRE+S+++IASA+LR ++ LSEKQAEA+LDI LR+LT LE KKF+DE K L E ISK
Sbjct: 477  IRLIREASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISK 536

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+N ILQ+IE+EA ELK+KF   RR             IDVIPNEEMLLA SEK
Sbjct: 537  LEELLSSRNNILQLIEQEATELKDKFPNPRRSVLEDTDSGQVEDIDVIPNEEMLLAFSEK 596

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP+TFNLQ+RGTIGKSVG +RVND MSDF+VC AHDHVLYFSD+G+VYSARAYK
Sbjct: 597  GYVKRMKPNTFNLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYSARAYK 656

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPEC RTAAGTPLVQ+LSL+DGERITSIIPVSEF  DQ+L+MLT  GYIKKVSLN+FS+I
Sbjct: 657  IPECGRTAAGTPLVQVLSLSDGERITSIIPVSEFEGDQFLLMLTAYGYIKKVSLNFFSSI 716

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLV GDELK
Sbjct: 717  RSTGIIAIQLVSGDELK 733


>ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X3 [Solanum tuberosum]
          Length = 957

 Score =  722 bits (1864), Expect(2) = 0.0
 Identities = 374/504 (74%), Positives = 423/504 (83%), Gaps = 14/504 (2%)
 Frame = +2

Query: 227  KLSPLIPST-MAFSARLGFTTSSLIRYRLSSHLS-----SSFVGISRCSRGFSELRFLST 388
            KL  L P T  A S  + F+T   +      H +     S F G+ R S   SELRFLS+
Sbjct: 2    KLHTLNPQTSFAQSNPMAFSTGIRLLRCYHHHFTFTAIPSRFSGLRRAS---SELRFLSS 58

Query: 389  XXXXXXXXXXXXXEETVSEERGGGDEGNGSLVLKERSGRDG--------KIVPIELHKEA 544
                            V+EE  G DEGNGS++L++R G +G        +IV  ELHKEA
Sbjct: 59   VTPPRKQVRPVSARRKVTEEEVG-DEGNGSVILRDRDGNEGGGGGGGGERIVLTELHKEA 117

Query: 545  TEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKF 724
            TEAYM+YAMSVLLGRALPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKCARVVGEVLGKF
Sbjct: 118  TEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKF 177

Query: 725  HPHGDTAVYDTLVRMAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLE 904
            HPHGD AVYD+LVRMAQDFS+R PLIRGHGNFGSIDADPPAAMRYTECRLE LTEAMLL 
Sbjct: 178  HPHGDNAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLA 237

Query: 905  DLHQDTVDFVPNFDNSQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSV 1084
            DL Q+TVDFVPNFDNSQKEP+LLPARIP LLLNG+SGIAVGMATNIPPHNLGELVDALS 
Sbjct: 238  DLEQNTVDFVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSA 297

Query: 1085 LIHNPEATLQELLECMPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTK 1264
            LIHNPEATLQELLE MPGPDFPTGG+IMGN GILEAYR+G+GR+V+RGKTD+ELLD+KTK
Sbjct: 298  LIHNPEATLQELLEYMPGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTK 357

Query: 1265 RTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSI 1444
            R A+II+E+PYQTNK++LVEKIA+LVENK++EG+SDIRDESDR+GMR+VIELKRGSD +I
Sbjct: 358  RAAIIIQEIPYQTNKASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAI 417

Query: 1445 VLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQE 1624
            VLNNLYRLTALQSSFSCNMVGIL+GQPKLMGLKELLQAFLDFRCSV+ERRA++KLS AQE
Sbjct: 418  VLNNLYRLTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQE 477

Query: 1625 RKHIVEGIIVGLQNVDGVYELLGK 1696
            R HIVEGII+GL N+D V + + K
Sbjct: 478  RSHIVEGIIIGLDNLDEVIKTIRK 501



 Score =  376 bits (966), Expect(2) = 0.0
 Identities = 193/257 (75%), Positives = 222/257 (86%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I+ IR++S++ +A+A LRKE+ L+EKQAEA+LDI+LR+LT+LE  KFVDEGK L  QISK
Sbjct: 496  IKTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRAQISK 555

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSSK QILQ+IE+EA+E+K+K+ T RR             IDVIPNEEMLLA+SEK
Sbjct: 556  LEELLSSKKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLAISEK 615

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP TFNLQNRGTIGKSVG +RVND MSDFLVC AHD VLYFSD+G VYS  AYK
Sbjct: 616  GYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSYPAYK 675

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSRTAAGTPL+QILSL+DGERITSIIPVSEFV DQYLVMLT+NGYIKKVSLNYF++I
Sbjct: 676  IPECSRTAAGTPLIQILSLSDGERITSIIPVSEFVGDQYLVMLTVNGYIKKVSLNYFASI 735

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGDELK
Sbjct: 736  RSTGIIAIQLVPGDELK 752


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score =  712 bits (1839), Expect(2) = 0.0
 Identities = 364/462 (78%), Positives = 406/462 (87%), Gaps = 5/462 (1%)
 Frame = +2

Query: 326  SSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXXEETVSEERGGGDEGNGSLVLKERS-- 499
            S F G+ + S   SELRFLS+                  EE G  DEGNGS++L++R   
Sbjct: 27   SRFSGLRKTS---SELRFLSSVTPPPRKQLRPVSARRKEEEVG--DEGNGSVILRDRGEN 81

Query: 500  -GRDG--KIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS 670
              R+G  ++V  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRIL+AMHELGLSS
Sbjct: 82   EDRNGGERVVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSS 141

Query: 671  RKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPLIRGHGNFGSIDADPPAA 850
            +KP+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLIRGHGNFGSIDADPPAA
Sbjct: 142  KKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPAA 201

Query: 851  MRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPARIPTLLLNGSSGIAVGM 1030
            MRYTECRLE LTE+MLL DL Q+TVDFVPNFDNSQKEP+LLPAR+P LLLNG+SGIAVGM
Sbjct: 202  MRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSLLPARVPNLLLNGASGIAVGM 261

Query: 1031 ATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNTGILEAYRSGKG 1210
            ATNIPPHNLGELVDALS LIHNPEATLQELLE MPGPDFPTGG+IMGN GILEA+R+G+G
Sbjct: 262  ATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMGNIGILEAFRTGRG 321

Query: 1211 RIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESD 1390
            R+V+RGKTD+ELLDSKTKR A+II+E+PYQTNK++LVEKIA+LVENK +EG+SDIRDESD
Sbjct: 322  RVVIRGKTDIELLDSKTKRAAIIIQEIPYQTNKASLVEKIADLVENKILEGVSDIRDESD 381

Query: 1391 RTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDF 1570
            R+GMRIVIELKRGSD +IVLNNLYRLTALQSSFSCNMVGIL+GQPKLMGLKELLQAFLDF
Sbjct: 382  RSGMRIVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDF 441

Query: 1571 RCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYELLGK 1696
            RCSV+ERRARFKLS AQER HIVEGIIVGL N+D V   + K
Sbjct: 442  RCSVVERRARFKLSQAQERNHIVEGIIVGLDNLDEVINTIRK 483



 Score =  377 bits (969), Expect(2) = 0.0
 Identities = 195/257 (75%), Positives = 219/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I  IR++S+N +A+A+LRKE+ LSEKQAEA+LDI+LR+LT+LE  KFV+EGK L  QISK
Sbjct: 478  INTIRKASSNALAAASLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLRTQISK 537

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSSK QILQ+IE+EAIE+KNKF   RR             IDVIPNEEMLLA+SEK
Sbjct: 538  LEELLSSKKQILQLIEEEAIEIKNKFFNPRRSMLEDTDSGDLEDIDVIPNEEMLLAISEK 597

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP TFNLQNRGTIGKSVG +RVND MSDFLVC AHD VLYFSD+G VYS+ AYK
Sbjct: 598  GYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSSPAYK 657

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSRTAAGTPLVQILSL+DGERITSIIPVSEF  DQYLVMLT+NGYIKKVSLNYF++I
Sbjct: 658  IPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAADQYLVMLTVNGYIKKVSLNYFASI 717

Query: 2398 RATGIIAIQLVPGDELK 2448
            R TGIIAIQLVP DELK
Sbjct: 718  RCTGIIAIQLVPDDELK 734


>ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Solanum lycopersicum]
          Length = 953

 Score =  715 bits (1845), Expect(2) = 0.0
 Identities = 365/487 (74%), Positives = 418/487 (85%), Gaps = 4/487 (0%)
 Frame = +2

Query: 248  STMAFSARLGFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXX 427
            ++MAFS  +        ++  ++ + S F G+ + S   SELRFLS+             
Sbjct: 16   NSMAFSTGIRLLRCYHHQFTFTA-IPSRFSGLRKAS---SELRFLSSVTPSRKHVRPVSA 71

Query: 428  EETVSEERGGGDEGNGSLVLKERSGRDG----KIVPIELHKEATEAYMAYAMSVLLGRAL 595
               V+EE  G +EGNGS+VL++R G +G    +IV  ELHKEATEAYM+YAMSVLLGRAL
Sbjct: 72   RRKVTEEEVG-EEGNGSVVLRDRDGNEGGGGERIVHTELHKEATEAYMSYAMSVLLGRAL 130

Query: 596  PDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQ 775
            PDVRDGLKPVHRRIL+AMHELGLSS+KP+KK ARVVGEVLGKFHPHGD AVYD+LVRMAQ
Sbjct: 131  PDVRDGLKPVHRRILYAMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNAVYDSLVRMAQ 190

Query: 776  DFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQ 955
            DFS+R PLIRGHGNFGSIDADPPAAMRYTECRLE LTEAMLL DL Q+TVDFVPNFDNSQ
Sbjct: 191  DFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQ 250

Query: 956  KEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMP 1135
            KEP+LLPARIP LLLNG+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE MP
Sbjct: 251  KEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMP 310

Query: 1136 GPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSA 1315
            GPDFPTGG+IMGN GILEAYR+G+GR+V+RGKTD+ELLD+KTKR A+II+E+PYQTNK++
Sbjct: 311  GPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKAS 370

Query: 1316 LVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSC 1495
            LVEKIA+LVENK++EG+SDIRDESDR+GMR+VIELKRGSD +IVLNNLYRLT LQSSFSC
Sbjct: 371  LVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTPLQSSFSC 430

Query: 1496 NMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDG 1675
            NMVGIL+GQPKLMGLKELLQAFLDFRCSV+ERRA++KLS AQER HIVEGII+GL N+D 
Sbjct: 431  NMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEGIIIGLDNLDE 490

Query: 1676 VYELLGK 1696
            V   + K
Sbjct: 491  VINTIRK 497



 Score =  372 bits (956), Expect(2) = 0.0
 Identities = 190/257 (73%), Positives = 221/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I  IR++S++ +A+A LRKE+ L+EKQAEA+LDI+LR+LT+LE  KFVDEGK L  QISK
Sbjct: 492  INTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRTQISK 551

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+ QILQ+IE+EA+E+K+K+ T RR             IDVIPNEEMLLA+SEK
Sbjct: 552  LEELLSSEKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIPNEEMLLAISEK 611

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP TFNLQNRGTIGKSVG +RVND MSDFLVC AHD VLYFSD+G VYS+ AYK
Sbjct: 612  GYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSSPAYK 671

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSRTAAGTPL+QILSL+DGERITSIIPVS+F  DQYLVMLT+NGYIKKVSLNYF++I
Sbjct: 672  IPECSRTAAGTPLIQILSLSDGERITSIIPVSDFAGDQYLVMLTVNGYIKKVSLNYFASI 731

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGDELK
Sbjct: 732  RSTGIIAIQLVPGDELK 748


>ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|508727564|gb|EOY19461.1|
            DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score =  715 bits (1846), Expect(2) = 0.0
 Identities = 374/488 (76%), Positives = 415/488 (85%), Gaps = 9/488 (1%)
 Frame = +2

Query: 254  MAFSARLGFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXXEE 433
            M+ S  L F   S +R+ L  +L+ S  G+S      S LRFLS                
Sbjct: 1    MSLSYTLRF---SFLRHNL--YLAPS--GVSALRPNLSHLRFLSVTPTRPLL-------S 46

Query: 434  TVSEERGGGDE-----GNGSL--VLKERSGR--DGKIVPIELHKEATEAYMAYAMSVLLG 586
             V   R GG E     GNGSL  ++ + SG   DG++VP ELHKEATE+YMAYA+SVLLG
Sbjct: 47   PVKARRAGGQEDEDGAGNGSLTAIVNDGSGGGGDGRVVPTELHKEATESYMAYALSVLLG 106

Query: 587  RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVR 766
            RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYD+LVR
Sbjct: 107  RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVR 166

Query: 767  MAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFD 946
            MAQDFS+R+PLI+GHGNFGSIDADPPAAMRYTECRLE LTEA+LL DL QDTVDFVPNFD
Sbjct: 167  MAQDFSLRFPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAILLADLEQDTVDFVPNFD 226

Query: 947  NSQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE 1126
            NS KEP+LLPAR+PTLLLNG+SGIAVGMATNIPPHNLGELVD L  LI NPEA+LQELLE
Sbjct: 227  NSHKEPSLLPARLPTLLLNGTSGIAVGMATNIPPHNLGELVDVLCALIQNPEASLQELLE 286

Query: 1127 CMPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTN 1306
             MPGPDFPTGGLIMGN GILEAYR+G+GRIVVRGK D+ELLDSKTKR+AVIIKE+PYQTN
Sbjct: 287  YMPGPDFPTGGLIMGNLGILEAYRTGRGRIVVRGKADIELLDSKTKRSAVIIKEIPYQTN 346

Query: 1307 KSALVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSS 1486
            KS+LVEKIAELVENKS+EGISDIRDESDR+GMR+VIELKRGSD SIVLNNLYRLTALQSS
Sbjct: 347  KSSLVEKIAELVENKSLEGISDIRDESDRSGMRVVIELKRGSDPSIVLNNLYRLTALQSS 406

Query: 1487 FSCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQN 1666
            FSCNMVGILDGQPK MGLKELLQ+FLDFRCSV+ERRAR+KLS AQ+R+HIVEGI+VGL N
Sbjct: 407  FSCNMVGILDGQPKQMGLKELLQSFLDFRCSVVERRARYKLSQAQDRRHIVEGIVVGLDN 466

Query: 1667 VDGVYELL 1690
            +D V +++
Sbjct: 467  LDSVIDII 474



 Score =  370 bits (951), Expect(2) = 0.0
 Identities = 191/257 (74%), Positives = 217/257 (84%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I IIRE+S+N  ASA LR E+ LS+KQAEA+LDI LR+L  LE KKFV E + L EQISK
Sbjct: 471  IDIIREASSNAAASAGLRNEFNLSDKQAEAILDINLRRLNLLERKKFVGESRSLMEQISK 530

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+  ILQ+IE+EAIELK+KF++ RR             IDVIPNEEMLLA SEK
Sbjct: 531  LTELLSSRKNILQLIEQEAIELKSKFSSPRRSILEDSDGGQLEDIDVIPNEEMLLAFSEK 590

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP+TFNLQNRGTIGKSVG +R ND MSDF+VC AHDHVLYFSD+G+VY+ARAYK
Sbjct: 591  GYVKRMKPNTFNLQNRGTIGKSVGKLRFNDAMSDFIVCRAHDHVLYFSDKGIVYTARAYK 650

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPE SRTAAGTPLVQI+SL++GERITSII VSEF EDQ+L MLT+NGYIKKVSLNYFSAI
Sbjct: 651  IPESSRTAAGTPLVQIISLSEGERITSIISVSEFAEDQFLAMLTVNGYIKKVSLNYFSAI 710

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGDELK
Sbjct: 711  RSTGIIAIQLVPGDELK 727


>ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 935

 Score =  707 bits (1825), Expect(2) = 0.0
 Identities = 364/488 (74%), Positives = 403/488 (82%), Gaps = 6/488 (1%)
 Frame = +2

Query: 245  PSTMAFSARLGFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXX 424
            PS++ F        S +    L     S F+   R     SELRFLS             
Sbjct: 3    PSSLHFQNPNPIFCSPMAHSALRVLRLSPFLQPLRLRHAPSELRFLSARAPRRPASAFRS 62

Query: 425  XEETVSEERGGGDEGNGSLVLKERSGRD------GKIVPIELHKEATEAYMAYAMSVLLG 586
                        D+ NGS+     +  D      G++VP ELHKEATEAYMAYAMSVLLG
Sbjct: 63   ARRR--------DDENGSVTTAASATTDNGYVSEGRVVPTELHKEATEAYMAYAMSVLLG 114

Query: 587  RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVR 766
            RALPDVRDGLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGDTAVYD+LVR
Sbjct: 115  RALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSLVR 174

Query: 767  MAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFD 946
            MAQDFS+R PLI+GHGNFGSIDADPPAAMRYTECRL+ LTEAMLL DL QDTVDFVPNFD
Sbjct: 175  MAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLTDLEQDTVDFVPNFD 234

Query: 947  NSQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE 1126
            NSQKEP+LLPAR+PTLLLNGSSGIAVGMATNIPPHNLGE+VD L VLIHNPEATLQELLE
Sbjct: 235  NSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEATLQELLE 294

Query: 1127 CMPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTN 1306
             MPGPDFPTGGLIMGN GILEAYR+G+GR+++RGKTD+ELLDSKTKRTA+IIKE+PYQTN
Sbjct: 295  YMPGPDFPTGGLIMGNLGILEAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIKEIPYQTN 354

Query: 1307 KSALVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSS 1486
            K+ LVEKIAELVENKS++GISDIRDESDR+GMRIVIELKRGSD  IVLNNLYRLT+LQS+
Sbjct: 355  KATLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQST 414

Query: 1487 FSCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQN 1666
            FSCNMVGIL+GQPK MGLKELLQAFLDFRCSV+ERRARFKLS AQER+HIVEGI++G  N
Sbjct: 415  FSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGILIGFDN 474

Query: 1667 VDGVYELL 1690
            +DGV  ++
Sbjct: 475  LDGVIRII 482



 Score =  375 bits (964), Expect(2) = 0.0
 Identities = 194/257 (75%), Positives = 220/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IRIIRE+S+N+ A+A LR  + LSEKQAEALLDI+LR+L+  ES  FV E K L EQISK
Sbjct: 479  IRIIREASSNSAAAAGLRNAFSLSEKQAEALLDISLRRLSLRESGNFVAESKSLMEQISK 538

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+  IL++IE+EAIELK+KF+  RR             IDVIPNEEM+LALSEK
Sbjct: 539  LEELLSSRKNILELIEQEAIELKSKFSNPRRSMLEDTDNGQLEDIDVIPNEEMILALSEK 598

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKPSTFNLQNRGTIGKSVG ++VND+MSDFLVCHAHDHVLYFSD+G VYSARAYK
Sbjct: 599  GYMKRMKPSTFNLQNRGTIGKSVGKLKVNDSMSDFLVCHAHDHVLYFSDKGTVYSARAYK 658

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSRTAAGTPLVQILSL+DGERITSIIPVSEF EDQ+L+MLTM GYIK+VSLN FS+I
Sbjct: 659  IPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAEDQFLLMLTMQGYIKRVSLNLFSSI 718

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+ GIIAIQLVPGDELK
Sbjct: 719  RSIGIIAIQLVPGDELK 735


>ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Cicer arietinum]
          Length = 942

 Score =  701 bits (1810), Expect(2) = 0.0
 Identities = 362/487 (74%), Positives = 405/487 (83%), Gaps = 6/487 (1%)
 Frame = +2

Query: 248  STMAFSARLGFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXX 427
            STM+FS        S  R    S  + +    S   R  SELRFLS              
Sbjct: 12   STMSFS--------SAFRLLTLSPFTPTITRFSFFRRTSSELRFLSASTRRRPSISVKAS 63

Query: 428  EETVSEERGGGDEGNGSLVLKERSG------RDGKIVPIELHKEATEAYMAYAMSVLLGR 589
                 E    G+ GNGSL + + +G       +G+IV  ELHKEATEAYM+YAMSVLLGR
Sbjct: 64   SGRRDEPEQDGN-GNGSLAVIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVLLGR 122

Query: 590  ALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRM 769
            ALPDVRDGLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGD+AVYD++VRM
Sbjct: 123  ALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSMVRM 182

Query: 770  AQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDN 949
            AQDFS+R PL+ GHGNFGSIDADPPAAMRYTECRLE L EAMLL DL QDTVDF PNFDN
Sbjct: 183  AQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPNFDN 242

Query: 950  SQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEC 1129
            SQKEP++LPAR+PTLLLNGSSGIAVGMATNIPPHNLGE+VD L V+IHNPEATLQELLE 
Sbjct: 243  SQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATLQELLEY 302

Query: 1130 MPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNK 1309
            MPGPDFPTGGLIMGN GILEAYR+G+GR++VRGKTD+ELLDSKTKRTA+IIKE+PYQTNK
Sbjct: 303  MPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIPYQTNK 362

Query: 1310 SALVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSF 1489
            +ALVEKIAELVENKS+EGISDIRDESDR+GMRIVIELKRGSD  IVLNNLYRLT+LQS+F
Sbjct: 363  AALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTF 422

Query: 1490 SCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNV 1669
            SCNMVGIL+GQPK MGLKELLQAFLDFRCSV+ERRARF+LS AQ+R+H+VEGI+VG  N+
Sbjct: 423  SCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILVGFNNL 482

Query: 1670 DGVYELL 1690
            D V  ++
Sbjct: 483  DRVIRII 489



 Score =  377 bits (969), Expect(2) = 0.0
 Identities = 195/257 (75%), Positives = 222/257 (86%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IRIIRE+S+NTIA+A LR E+ LSEKQAEALLD++LR+LT  ES  FV E K L EQISK
Sbjct: 486  IRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENKSLVEQISK 545

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+  IL++IE+EAI+LKNKFA+ RR             IDVIPNEEMLLALSEK
Sbjct: 546  LEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIPNEEMLLALSEK 605

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GYLKRMKPSTFNLQNRGTIGKSVG +++ND+MSDF+VC AHD+VLYFSD+G VYSARAYK
Sbjct: 606  GYLKRMKPSTFNLQNRGTIGKSVGKLKMNDSMSDFIVCRAHDYVLYFSDKGTVYSARAYK 665

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSRTAAGTPLVQILSL+DGERITSIIPVSEF EDQ+L+MLTM GYIK+V LN FS+I
Sbjct: 666  IPECSRTAAGTPLVQILSLSDGERITSIIPVSEFTEDQFLLMLTMQGYIKRVPLNSFSSI 725

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGD+LK
Sbjct: 726  RSTGIIAIQLVPGDKLK 742


>ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [Amborella trichopoda]
            gi|548835451|gb|ERM97286.1| hypothetical protein
            AMTR_s00119p00135690 [Amborella trichopoda]
          Length = 963

 Score =  694 bits (1790), Expect(2) = 0.0
 Identities = 363/505 (71%), Positives = 414/505 (81%), Gaps = 23/505 (4%)
 Frame = +2

Query: 245  PSTMAFSARLGFTTSSLIRYRLSS-HLSSSFVGISRCS----RGFS---ELRFLSTXXXX 400
            PS MAFS+ L   T +L+R+  SS  L  SF           R FS   E+R LS     
Sbjct: 17   PSLMAFSSSLRLATKTLVRFHHSSLQLHGSFTCFPHLQTPNYRFFSVKKEVRLLSGVSRG 76

Query: 401  XXXXXXXXXEETVSEERGGGDEG---------------NGSLVLKERSGRDGKIVPIELH 535
                         ++ R GGDEG               NG +++KE++  + ++V  ELH
Sbjct: 77   PGKGSGVVR----AKRRDGGDEGKGEKKALENDDAEGGNGGVMVKEKAF-EARVVMAELH 131

Query: 536  KEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVL 715
            KEATE+Y+AYA+SVL+GRALPDVRDGLKPVHRRI+FAMHELG SSRKPFKKCARVVGEVL
Sbjct: 132  KEATESYLAYALSVLVGRALPDVRDGLKPVHRRIIFAMHELGFSSRKPFKKCARVVGEVL 191

Query: 716  GKFHPHGDTAVYDTLVRMAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAM 895
            GKFHPHGDTAVYD+LVRMAQDFSMR PLI+GHGNFGSIDADPPAAMRYTECRLE LTEAM
Sbjct: 192  GKFHPHGDTAVYDSLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAM 251

Query: 896  LLEDLHQDTVDFVPNFDNSQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDA 1075
             L DL Q+TV+FVPNFD SQKEP+LLPAR+P LLLNGSSGIAVGMATNIPPHNLGELVDA
Sbjct: 252  FLSDLEQNTVNFVPNFDGSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDA 311

Query: 1076 LSVLIHNPEATLQELLECMPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDS 1255
            LSVL+HNP+ATLQELLE MPGPDFPTGG IMGN GIL+AYR+G+GRIVVRGKTDVE+LD+
Sbjct: 312  LSVLLHNPDATLQELLEYMPGPDFPTGGEIMGNIGILDAYRTGRGRIVVRGKTDVEVLDA 371

Query: 1256 KTKRTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSD 1435
            K K +A++I+E+PYQTNK++LVEKIAELVE+KSIEG+SDIRDESDR+GMRIVIELK+GSD
Sbjct: 372  KGKLSALVIREIPYQTNKASLVEKIAELVEDKSIEGVSDIRDESDRSGMRIVIELKKGSD 431

Query: 1436 SSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSH 1615
             SIVLN LY+LT LQSSFSCNMVGILDGQPKLMGLKE+LQAFLDFRCSVIERRARFKL  
Sbjct: 432  PSIVLNKLYKLTVLQSSFSCNMVGILDGQPKLMGLKEMLQAFLDFRCSVIERRARFKLKQ 491

Query: 1616 AQERKHIVEGIIVGLQNVDGVYELL 1690
            AQER+HI+EGI+VGL N+D V  L+
Sbjct: 492  AQEREHIIEGILVGLDNLDDVIHLI 516



 Score =  384 bits (985), Expect(2) = 0.0
 Identities = 194/257 (75%), Positives = 224/257 (87%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I +IRE+S+ ++ASAAL+K Y LS+KQAEALLDITLRKLTSLE KKFV+EG+ L EQISK
Sbjct: 513  IHLIRENSSLSMASAALKKAYNLSDKQAEALLDITLRKLTSLERKKFVEEGESLKEQISK 572

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            LNELLSSK  + QMIE+EAIE+KNKF T RR             IDVIPNEEMLL  SEK
Sbjct: 573  LNELLSSKKLVYQMIEQEAIEVKNKFRTPRRSSLEEGDGSQLEEIDVIPNEEMLLVFSEK 632

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRM+P+TF+LQNRGTIGKSVG MRVND +SDF+VCHAHDHVLYFSD+G+VYSARA++
Sbjct: 633  GYVKRMRPNTFSLQNRGTIGKSVGKMRVNDALSDFIVCHAHDHVLYFSDKGIVYSARAFR 692

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPEC+RTAAGTPLVQILSL+DGERITS+IPVSEFV+DQYL+MLT  G+IKK+SL +FSAI
Sbjct: 693  IPECTRTAAGTPLVQILSLSDGERITSVIPVSEFVKDQYLIMLTAKGFIKKISLEFFSAI 752

Query: 2398 RATGIIAIQLVPGDELK 2448
            R TGIIAIQLVPGDELK
Sbjct: 753  RITGIIAIQLVPGDELK 769


>gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Mimulus guttatus]
          Length = 928

 Score =  705 bits (1819), Expect(2) = 0.0
 Identities = 366/472 (77%), Positives = 408/472 (86%), Gaps = 9/472 (1%)
 Frame = +2

Query: 308  LSSH---LSSSFVGISRC--SRGFSELRFLSTXXXXXXXXXXXXXEETVSEERGGGDEGN 472
            L SH   LS S  G SR   +R  +ELRFLS+              +  S +R    E N
Sbjct: 10   LRSHPHTLSFSVAGPSRLLLARRVTELRFLSSVGPQRRLFAV----KASSRKREDEVEEN 65

Query: 473  GSLVLKERSGR----DGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRIL 640
            GS+   +  G     +G++V  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRIL
Sbjct: 66   GSVATVKDGGGGEGGEGRVVVYELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRIL 125

Query: 641  FAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPLIRGHGNF 820
            +AMHELGLSSRKP KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLIRGHGNF
Sbjct: 126  YAMHELGLSSRKPHKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNF 185

Query: 821  GSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPARIPTLLL 1000
            GS+DADPPAAMRYTECRLE L EAMLL DL QDTVDFVPNFDNSQKEP+LLPARIP LLL
Sbjct: 186  GSMDADPPAAMRYTECRLEALAEAMLLSDLEQDTVDFVPNFDNSQKEPSLLPARIPNLLL 245

Query: 1001 NGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNTG 1180
            NG+SGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE MPGPDFPTGG+IMGNTG
Sbjct: 246  NGASGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGIIMGNTG 305

Query: 1181 ILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAELVENKSIE 1360
            IL+AYR+G+GR+V+RGKTDVEL DSK+KR+A+IIKE+PYQTNK++LVEKIAELVENK +E
Sbjct: 306  ILDAYRTGRGRVVIRGKTDVELFDSKSKRSAIIIKEIPYQTNKASLVEKIAELVENKILE 365

Query: 1361 GISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGL 1540
            GISDIRDESDR+GMRIVIELKRGS+ SIVLNNLYRLTALQS+FSCNMVGIL+GQPKLMGL
Sbjct: 366  GISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRLTALQSTFSCNMVGILNGQPKLMGL 425

Query: 1541 KELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYELLGK 1696
            KELLQAFLDFRCSV+ERRA++KLS AQ+R HIVEGII GL+N+D V +L+ K
Sbjct: 426  KELLQAFLDFRCSVVERRAKYKLSQAQDRYHIVEGIITGLENLDRVIDLIRK 477



 Score =  370 bits (951), Expect(2) = 0.0
 Identities = 192/257 (74%), Positives = 217/257 (84%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I +IR++S++ +A+  LRKE+ LS+KQAEA+LDI+LRKLTSLE  KFVDEGK L+ QISK
Sbjct: 472  IDLIRKASSHVLATTELRKEFDLSDKQAEAILDISLRKLTSLEKNKFVDEGKSLSLQISK 531

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+ QIL+MIE EA E+KNKF T RR             IDVIPNEE+LLALSEK
Sbjct: 532  LQELLSSRKQILEMIEDEANEIKNKFFTPRRSMLEDTDSGQLEDIDVIPNEEILLALSEK 591

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GYLKRM+P TFNLQ RGTIGKSVG +RVNDTMSDFLVC  HD+VLYFSD+G VYSARAYK
Sbjct: 592  GYLKRMRPDTFNLQTRGTIGKSVGKLRVNDTMSDFLVCRTHDYVLYFSDKGTVYSARAYK 651

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSR AAGTPLV ILSL++GERITSIIPVSEF  DQYL+MLT+ GYIKKVSLNYFS+I
Sbjct: 652  IPECSRAAAGTPLVHILSLSEGERITSIIPVSEFEGDQYLMMLTVKGYIKKVSLNYFSSI 711

Query: 2398 RATGIIAIQLVPGDELK 2448
            R TGIIAIQLVPGDELK
Sbjct: 712  RCTGIIAIQLVPGDELK 728


>ref|XP_007153283.1| hypothetical protein PHAVU_003G022300g [Phaseolus vulgaris]
            gi|561026637|gb|ESW25277.1| hypothetical protein
            PHAVU_003G022300g [Phaseolus vulgaris]
          Length = 942

 Score =  699 bits (1803), Expect(2) = 0.0
 Identities = 343/418 (82%), Positives = 383/418 (91%)
 Frame = +2

Query: 437  VSEERGGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGL 616
            V   R   + G+ +      +G +G++VP ELHKEATEAYMAYAMSVLLGRALPDVRDGL
Sbjct: 72   VKAVRRSDENGSVTATADSGNGSEGRVVPTELHKEATEAYMAYAMSVLLGRALPDVRDGL 131

Query: 617  KPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYP 796
            KPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R P
Sbjct: 132  KPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSP 191

Query: 797  LIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLP 976
            LI+GHGNFGSIDADPPAAMRYTECRL+ LTEAMLL DL QDTVDFVPNFDNSQKEP+LLP
Sbjct: 192  LIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLADLEQDTVDFVPNFDNSQKEPSLLP 251

Query: 977  ARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTG 1156
            AR+PTLLLNGSSGIAVGMATNIPPHNLGE+VD L VLIHNPEATLQELLE MPGPDFPTG
Sbjct: 252  ARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEATLQELLEYMPGPDFPTG 311

Query: 1157 GLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAE 1336
            GLIMGN GIL+AYR+G+GR+++RGKTD+ELLDSKTKRTA+IIKE+PYQTNK++LVEKIAE
Sbjct: 312  GLIMGNLGILDAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIKEIPYQTNKASLVEKIAE 371

Query: 1337 LVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILD 1516
            +VENKS++GISDIRDESDR+GMRIVIELKRGSD  IVLNNLYRLT+LQS+FSCNMVGIL+
Sbjct: 372  VVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILN 431

Query: 1517 GQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYELL 1690
            GQPK MGLKELLQAFLDFRCSV+ERRA FKLS A+ RKHIVEGI++G  N+D V  ++
Sbjct: 432  GQPKQMGLKELLQAFLDFRCSVVERRAMFKLSQARGRKHIVEGILIGFDNLDEVIRII 489



 Score =  376 bits (966), Expect(2) = 0.0
 Identities = 195/257 (75%), Positives = 219/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IRIIRE+S+N+ A+  LR  + LSEKQAEALLD++LR+LT  ES  FV E K L EQISK
Sbjct: 486  IRIIREASSNSAAAVGLRNAFSLSEKQAEALLDMSLRRLTLRESGNFVAESKSLMEQISK 545

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+  IL++IE+EAIELKNKFA  RR             IDVIPNE+MLLA+SEK
Sbjct: 546  LEELLSSRKNILELIEQEAIELKNKFANPRRSMLEDTDNGQLEDIDVIPNEDMLLAVSEK 605

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GYLKRMKPSTFNLQNRGTIGKSVG +RVND+MSDFLVC AHDHVLYFSD+G VYSARAYK
Sbjct: 606  GYLKRMKPSTFNLQNRGTIGKSVGKLRVNDSMSDFLVCRAHDHVLYFSDKGTVYSARAYK 665

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            +PECSRTAAGTPLV ILSL+DGERITSIIPVSEFVEDQ+L+MLTM GYIK+VSLN FS+I
Sbjct: 666  VPECSRTAAGTPLVHILSLSDGERITSIIPVSEFVEDQFLLMLTMQGYIKRVSLNLFSSI 725

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGDELK
Sbjct: 726  RSTGIIAIQLVPGDELK 742


>ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Cicer arietinum]
          Length = 944

 Score =  696 bits (1797), Expect(2) = 0.0
 Identities = 362/489 (74%), Positives = 405/489 (82%), Gaps = 8/489 (1%)
 Frame = +2

Query: 248  STMAFSARLGFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXX 427
            STM+FS        S  R    S  + +    S   R  SELRFLS              
Sbjct: 12   STMSFS--------SAFRLLTLSPFTPTITRFSFFRRTSSELRFLSASTRRRPSISVKAS 63

Query: 428  EETVSEERGGGDEGNGSLVLKERSG------RDGKIVPIELHKEATEAYMAYAMSVLLGR 589
                 E    G+ GNGSL + + +G       +G+IV  ELHKEATEAYM+YAMSVLLGR
Sbjct: 64   SGRRDEPEQDGN-GNGSLAVIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVLLGR 122

Query: 590  ALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRM 769
            ALPDVRDGLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGD+AVYD++VRM
Sbjct: 123  ALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSMVRM 182

Query: 770  AQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDN 949
            AQDFS+R PL+ GHGNFGSIDADPPAAMRYTECRLE L EAMLL DL QDTVDF PNFDN
Sbjct: 183  AQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPNFDN 242

Query: 950  SQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEAT--LQELL 1123
            SQKEP++LPAR+PTLLLNGSSGIAVGMATNIPPHNLGE+VD L V+IHNPEAT  LQELL
Sbjct: 243  SQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATVSLQELL 302

Query: 1124 ECMPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQT 1303
            E MPGPDFPTGGLIMGN GILEAYR+G+GR++VRGKTD+ELLDSKTKRTA+IIKE+PYQT
Sbjct: 303  EYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIPYQT 362

Query: 1304 NKSALVEKIAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQS 1483
            NK+ALVEKIAELVENKS+EGISDIRDESDR+GMRIVIELKRGSD  IVLNNLYRLT+LQS
Sbjct: 363  NKAALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQS 422

Query: 1484 SFSCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQ 1663
            +FSCNMVGIL+GQPK MGLKELLQAFLDFRCSV+ERRARF+LS AQ+R+H+VEGI+VG  
Sbjct: 423  TFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILVGFN 482

Query: 1664 NVDGVYELL 1690
            N+D V  ++
Sbjct: 483  NLDRVIRII 491



 Score =  377 bits (969), Expect(2) = 0.0
 Identities = 195/257 (75%), Positives = 222/257 (86%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IRIIRE+S+NTIA+A LR E+ LSEKQAEALLD++LR+LT  ES  FV E K L EQISK
Sbjct: 488  IRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENKSLVEQISK 547

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+  IL++IE+EAI+LKNKFA+ RR             IDVIPNEEMLLALSEK
Sbjct: 548  LEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIPNEEMLLALSEK 607

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GYLKRMKPSTFNLQNRGTIGKSVG +++ND+MSDF+VC AHD+VLYFSD+G VYSARAYK
Sbjct: 608  GYLKRMKPSTFNLQNRGTIGKSVGKLKMNDSMSDFIVCRAHDYVLYFSDKGTVYSARAYK 667

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSRTAAGTPLVQILSL+DGERITSIIPVSEF EDQ+L+MLTM GYIK+V LN FS+I
Sbjct: 668  IPECSRTAAGTPLVQILSLSDGERITSIIPVSEFTEDQFLLMLTMQGYIKRVPLNSFSSI 727

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGD+LK
Sbjct: 728  RSTGIIAIQLVPGDKLK 744


>ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus trichocarpa]
            gi|550330577|gb|EEF01573.2| DNA gyrase subunit A family
            protein [Populus trichocarpa]
          Length = 948

 Score =  697 bits (1800), Expect(2) = 0.0
 Identities = 353/452 (78%), Positives = 393/452 (86%), Gaps = 5/452 (1%)
 Frame = +2

Query: 356  RGFSELRFLSTXXXXXXXXXXXXXEETVSEERGGGDEGNGSLVLKERSGR-----DGKIV 520
            R  S+LRF S+             EE  ++     D  NGSL++K+ +G      +G++V
Sbjct: 46   RSVSDLRFSSSSPRIRPVVQSRRREEPATD-----DSENGSLLVKDPNGGSPGGGNGRVV 100

Query: 521  PIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARV 700
              ELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+KPFKKCARV
Sbjct: 101  QTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARV 160

Query: 701  VGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPLIRGHGNFGSIDADPPAAMRYTECRLEP 880
            VGEVLGKFHPHGDTAVYD LVRMAQDFS+R PLI+GHGNFGS+DADPPAAMRYTECRL+ 
Sbjct: 161  VGEVLGKFHPHGDTAVYDALVRMAQDFSLRCPLIQGHGNFGSVDADPPAAMRYTECRLDG 220

Query: 881  LTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPARIPTLLLNGSSGIAVGMATNIPPHNLG 1060
            LTEA+ L DL QDTVDFVPNFDNSQKEP+L P R+PTLLLNGSSGIAVGMAT IPPHNLG
Sbjct: 221  LTEAVFLADLEQDTVDFVPNFDNSQKEPSLFPTRLPTLLLNGSSGIAVGMATKIPPHNLG 280

Query: 1061 ELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNTGILEAYRSGKGRIVVRGKTDV 1240
            ELVD L  LIHNPEATLQELLE MPGPDFPTGG+IMGN GIL+AYRSG+GRIVVRGKTDV
Sbjct: 281  ELVDVLCALIHNPEATLQELLEYMPGPDFPTGGIIMGNQGILDAYRSGQGRIVVRGKTDV 340

Query: 1241 ELLDSKTKRTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRTGMRIVIEL 1420
            ELLDSKTKR AVIIKE+PYQTNK++LVEKIAELVE+K+++GISDIRDESDR+GMRIVIEL
Sbjct: 341  ELLDSKTKRNAVIIKEIPYQTNKASLVEKIAELVEDKNLDGISDIRDESDRSGMRIVIEL 400

Query: 1421 KRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRCSVIERRAR 1600
            KRG+D SIVLNNLYRLT LQSSFSCNMVGILDGQPK MGLKELLQAFLDFRCSV+ERRA 
Sbjct: 401  KRGADPSIVLNNLYRLTPLQSSFSCNMVGILDGQPKQMGLKELLQAFLDFRCSVVERRAM 460

Query: 1601 FKLSHAQERKHIVEGIIVGLQNVDGVYELLGK 1696
            FKLS AQ+R+HIVEG++ GL N+D V +++ K
Sbjct: 461  FKLSEAQKRRHIVEGVMAGLDNLDRVVDIIRK 492



 Score =  375 bits (962), Expect(2) = 0.0
 Identities = 191/257 (74%), Positives = 221/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            + IIR++S+N IASA LR E+ LSEKQAEA+LDI+LR+LT LE KKFV+E K L EQI+K
Sbjct: 487  VDIIRKASSNAIASADLRNEFSLSEKQAEAILDISLRRLTLLEGKKFVEESKSLMEQITK 546

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+  ILQ+IE+EA+ELKNKF+  RR             IDVIPNEEMLLA+SEK
Sbjct: 547  LEELLSSRGNILQLIEQEAVELKNKFSNPRRSMLEDSDSGQLEDIDVIPNEEMLLAISEK 606

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP+TFNLQNRGTIGKSVG +R +D MSDF+VCHAHD VLYFSD+G+VYSA AYK
Sbjct: 607  GYVKRMKPNTFNLQNRGTIGKSVGKLRDSDAMSDFIVCHAHDRVLYFSDQGIVYSAPAYK 666

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPEC+R AAGTPL+Q LSL+DGERITSIIPVSEFVEDQ+L+MLT+NGYIKKVSLN FSAI
Sbjct: 667  IPECTRAAAGTPLIQFLSLSDGERITSIIPVSEFVEDQFLLMLTVNGYIKKVSLNSFSAI 726

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGDELK
Sbjct: 727  RSTGIIAIQLVPGDELK 743


>ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 939

 Score =  697 bits (1800), Expect(2) = 0.0
 Identities = 350/415 (84%), Positives = 381/415 (91%)
 Frame = +2

Query: 443  EERGGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKP 622
            E  G G  GNGS+++K+    D +IV +ELHKEAT+AYMAYAMSVLLGRALPD+RDGLKP
Sbjct: 71   EGAGEGQNGNGSVLVKDS---DERIVRVELHKEATDAYMAYAMSVLLGRALPDIRDGLKP 127

Query: 623  VHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPLI 802
            VHRRIL+AMHEL LSSRKPF KCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLI
Sbjct: 128  VHRRILYAMHELRLSSRKPFVKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLI 187

Query: 803  RGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPAR 982
             GHGNFGSIDADP AAMRYTECRLE LTEAMLL DL QDTVDFVPNFDNSQKEP+LLPAR
Sbjct: 188  NGHGNFGSIDADPAAAMRYTECRLEALTEAMLLSDLEQDTVDFVPNFDNSQKEPSLLPAR 247

Query: 983  IPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGL 1162
            +P LLLNGSSGIAVGMATNIPPHNLGELVD LSVLIHNPEATLQELLE MPGPDFPTGGL
Sbjct: 248  VPNLLLNGSSGIAVGMATNIPPHNLGELVDVLSVLIHNPEATLQELLEYMPGPDFPTGGL 307

Query: 1163 IMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAELV 1342
            IMGN GILEAYR+G+GRIVVRGKTD+E LDSK KR+A+IIKE+PYQTNK+ALVEKIA+LV
Sbjct: 308  IMGNLGILEAYRTGRGRIVVRGKTDIESLDSKGKRSAIIIKEIPYQTNKAALVEKIAQLV 367

Query: 1343 ENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQ 1522
            ENK ++GISDIRDESDRTGMR+VIELKRGSD SIVLNNLYRLT+LQSSFSCNMVGIL+GQ
Sbjct: 368  ENKILDGISDIRDESDRTGMRVVIELKRGSDPSIVLNNLYRLTSLQSSFSCNMVGILNGQ 427

Query: 1523 PKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYEL 1687
            PKLMGLKELLQAFLDFRCSVIERRA+FKLS AQ+R+HIVEGI VGL N+  V  +
Sbjct: 428  PKLMGLKELLQAFLDFRCSVIERRAKFKLSQAQDRRHIVEGIAVGLDNLQRVMRI 482



 Score =  371 bits (952), Expect(2) = 0.0
 Identities = 189/257 (73%), Positives = 218/257 (84%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            +RI  E+SNNTIAS+ LR E+ LSEKQAEA+LD   R+L  LE KKF +E + L EQISK
Sbjct: 480  MRISLEASNNTIASSLLRNEFNLSEKQAEAILDFNFRRLNVLERKKFDNESESLKEQISK 539

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSSK +ILQ++E+EAI++KNKFA  RR             IDVIPN+EMLLA SEK
Sbjct: 540  LEELLSSKKRILQVVEQEAIDIKNKFANPRRSMLEDSDGGQLDDIDVIPNDEMLLAFSEK 599

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP+TFNLQNRGTIGKSVG +RVND MSDF+VCHAHDHVL+FSD+G VYSARAYK
Sbjct: 600  GYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDHVLFFSDKGTVYSARAYK 659

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSRTAAGTPLVQILSL+DGERITS+IPVSEF  DQ+L+MLT+NGYIKKVSL+ FS+I
Sbjct: 660  IPECSRTAAGTPLVQILSLSDGERITSVIPVSEFAGDQFLLMLTVNGYIKKVSLSSFSSI 719

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQLVPGDELK
Sbjct: 720  RSTGIIAIQLVPGDELK 736


>ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Citrus sinensis]
          Length = 942

 Score =  678 bits (1749), Expect(2) = 0.0
 Identities = 354/481 (73%), Positives = 397/481 (82%)
 Frame = +2

Query: 248  STMAFSARLGFTTSSLIRYRLSSHLSSSFVGISRCSRGFSELRFLSTXXXXXXXXXXXXX 427
            S MA S+ L F++S  + +    H  + F+   R        RFLS              
Sbjct: 10   SPMALSSTLRFSSSFFLFHNHCRH--ARFLSSPR--------RFLSFPPSRPPPSSRTPI 59

Query: 428  EETVSEERGGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVR 607
              +  EER G    NGS V         +IVP+ELH+E T +Y+ Y+MSVLLGRALPDVR
Sbjct: 60   LASKDEERNG----NGS-VATVGPNVSPRIVPVELHEEMTGSYITYSMSVLLGRALPDVR 114

Query: 608  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSM 787
            DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+
Sbjct: 115  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSL 174

Query: 788  RYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPA 967
            RYPLIRGHGNFGSIDADP AAMRYTECRLE L+EAMLL D+ QDTV+FVPNFD SQKEP+
Sbjct: 175  RYPLIRGHGNFGSIDADPAAAMRYTECRLEALSEAMLLADIDQDTVNFVPNFDESQKEPS 234

Query: 968  LLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDF 1147
            LLPAR+PTLLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLE MPGPDF
Sbjct: 235  LLPARLPTLLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPGPDF 294

Query: 1148 PTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEK 1327
            PTGGLIMGN GIL+AYR+G+GRI VRGKT+VELLDSK+KR  VIIKE+PYQTNKS LVEK
Sbjct: 295  PTGGLIMGNLGILDAYRTGRGRITVRGKTEVELLDSKSKRMGVIIKEIPYQTNKSMLVEK 354

Query: 1328 IAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVG 1507
            IAELVENK+++GISDIRDESDR+GMRIVIELKRG+D SIV+N+LYRLTALQSSFSCNMVG
Sbjct: 355  IAELVENKTLDGISDIRDESDRSGMRIVIELKRGADPSIVVNSLYRLTALQSSFSCNMVG 414

Query: 1508 ILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYEL 1687
            ILDGQPK MGLKE+LQAFLDFRCSV+ERRARFKLS  +ER+HIVEGI+VGL N+D V  +
Sbjct: 415  ILDGQPKQMGLKEVLQAFLDFRCSVVERRARFKLSQVKERRHIVEGIMVGLDNLDRVIRI 474

Query: 1688 L 1690
            +
Sbjct: 475  V 475



 Score =  379 bits (973), Expect(2) = 0.0
 Identities = 193/257 (75%), Positives = 220/257 (85%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            IRI+RE+ +N+ ASAAL+ E+ LSEKQA+A+LD+ LR+LT LE KKFVDE K L EQI K
Sbjct: 472  IRIVREAPSNSTASAALKDEFKLSEKQADAILDMNLRRLTMLERKKFVDESKTLMEQILK 531

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L ELLSS+  ILQ+IE+EAIELKN+F+T R              ID+IPN+EMLLA+SEK
Sbjct: 532  LEELLSSRKNILQLIEQEAIELKNRFSTPRLSMLEDADSGQLDDIDIIPNDEMLLAISEK 591

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMKP+TFNLQNRGTIGKSVG +RVND MSDF+VC AHDHVLYFSDRG+VYSARAYK
Sbjct: 592  GYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDRGIVYSARAYK 651

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPEC+R AAGTPLVQILSL+DGERITSIIPVSEF  DQ+LVMLTMNGYIKKVSLN FS+I
Sbjct: 652  IPECTRNAAGTPLVQILSLSDGERITSIIPVSEFAGDQFLVMLTMNGYIKKVSLNLFSSI 711

Query: 2398 RATGIIAIQLVPGDELK 2448
            R TGIIAIQLVPGDELK
Sbjct: 712  RTTGIIAIQLVPGDELK 728


>ref|XP_002463658.1| hypothetical protein SORBIDRAFT_01g003750 [Sorghum bicolor]
            gi|241917512|gb|EER90656.1| hypothetical protein
            SORBIDRAFT_01g003750 [Sorghum bicolor]
          Length = 845

 Score =  688 bits (1776), Expect(2) = 0.0
 Identities = 333/413 (80%), Positives = 379/413 (91%)
 Frame = +2

Query: 452  GGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR 631
            GGG++G G   +KER      I+P+ELHKEAT+AYM+YAMSVLLGRALPDVRDGLKPVHR
Sbjct: 81   GGGEDGGGGAAVKER------ILPVELHKEATQAYMSYAMSVLLGRALPDVRDGLKPVHR 134

Query: 632  RILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPLIRGH 811
            RIL+AMHE+GL+SR+PF+KCARVVGEVLGKFHPHGDTAVY++LVRMAQDFSMRYPL++GH
Sbjct: 135  RILYAMHEMGLASRRPFRKCARVVGEVLGKFHPHGDTAVYESLVRMAQDFSMRYPLVQGH 194

Query: 812  GNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPARIPT 991
            GNFGS+DADPPAAMRYTECRL+ L EAM L DL  +TVDFVPNFDNSQKEP+LLPAR+P+
Sbjct: 195  GNFGSVDADPPAAMRYTECRLDSLAEAMFLTDLELNTVDFVPNFDNSQKEPSLLPARVPS 254

Query: 992  LLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMG 1171
            LLLNGSSGIAVGMATNIPPHNLGELVD LSV+I NPEATLQELLECMPGPDFPTGG I+G
Sbjct: 255  LLLNGSSGIAVGMATNIPPHNLGELVDVLSVIIQNPEATLQELLECMPGPDFPTGGTILG 314

Query: 1172 NTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAELVENK 1351
            N GILEAY+SG+GRIVVRGKTD+E +D K+KRTA+IIKE+PYQTNK+ LV+KIAEL E+K
Sbjct: 315  NQGILEAYKSGRGRIVVRGKTDIETIDEKSKRTAIIIKEIPYQTNKATLVQKIAELAEDK 374

Query: 1352 SIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKL 1531
             +EGISDIRDESDRTGMR+VIELKR +D +IVLNNLYR TALQSSFSCNMV ILDGQPKL
Sbjct: 375  VLEGISDIRDESDRTGMRVVIELKRSADPAIVLNNLYRHTALQSSFSCNMVAILDGQPKL 434

Query: 1532 MGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYELL 1690
            MGLKE+LQAFLDFRCSVIERRAR+KLS A ERKHIVEGI++GL N+D V +++
Sbjct: 435  MGLKEILQAFLDFRCSVIERRARYKLSQALERKHIVEGIVIGLDNLDAVIQMI 487



 Score =  365 bits (936), Expect(2) = 0.0
 Identities = 188/258 (72%), Positives = 220/258 (85%), Gaps = 1/258 (0%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I++IRE+SN+T A+ AL KE+ LSEKQAEALLDITL++LTSLE KKFVDE K+L+E+ISK
Sbjct: 484  IQMIRETSNHTAATGALVKEFDLSEKQAEALLDITLKRLTSLERKKFVDEAKILSEEISK 543

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLA-LSE 2034
            LNELLSSK  I Q+I++EA +LKNKF+T RR             ID+IPNEEMLL  LSE
Sbjct: 544  LNELLSSKELIFQLIQQEAADLKNKFSTPRRSLIDDSVSCEVDDIDIIPNEEMLLKILSE 603

Query: 2035 KGYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAY 2214
            KGY KRM P+TF+LQ+RGTIGKSVG MR+ND+ SDF+VC  HDHVLYFSD+G+VYSARAY
Sbjct: 604  KGYAKRMNPNTFSLQHRGTIGKSVGKMRLNDSTSDFIVCQTHDHVLYFSDKGIVYSARAY 663

Query: 2215 KIPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSA 2394
            KIPEC+RTA GTPLVQ+L L+DGERITSIIPVSEF EDQ LVMLT+NGYIKKV LN FS+
Sbjct: 664  KIPECTRTATGTPLVQLLPLSDGERITSIIPVSEFGEDQCLVMLTVNGYIKKVPLNAFSS 723

Query: 2395 IRATGIIAIQLVPGDELK 2448
            IR+TGII+IQLVPGDELK
Sbjct: 724  IRSTGIISIQLVPGDELK 741


>gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]
          Length = 932

 Score =  681 bits (1757), Expect(2) = 0.0
 Identities = 332/413 (80%), Positives = 378/413 (91%)
 Frame = +2

Query: 452  GGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR 631
            GGG+ G   LV+KER      I+P+ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHR
Sbjct: 83   GGGEGGGAGLVVKER------ILPVELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHR 136

Query: 632  RILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRYPLIRGH 811
            RIL+AMHE+GL+SR+PF+KCARVVGEVLGKFHPHGDTAVY++LVRMAQDFSMRYPL++GH
Sbjct: 137  RILYAMHEMGLASRRPFRKCARVVGEVLGKFHPHGDTAVYESLVRMAQDFSMRYPLVQGH 196

Query: 812  GNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPALLPARIPT 991
            GNFGS+DADPPAAMRYTECRL+ L EAM L DL  +TVDFVPNFDNSQKEP+LLP+R+P+
Sbjct: 197  GNFGSVDADPPAAMRYTECRLDSLAEAMFLTDLELNTVDFVPNFDNSQKEPSLLPSRVPS 256

Query: 992  LLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMG 1171
            LLLNGSSGIAVGMATNIPPHNLGELVD LSV+I N EATLQELLE MPGPDFPTGG I+G
Sbjct: 257  LLLNGSSGIAVGMATNIPPHNLGELVDVLSVIIENREATLQELLERMPGPDFPTGGTILG 316

Query: 1172 NTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEKIAELVENK 1351
            N GILEAY+SG+GRIVVRGKTD+E +D K+KRTA+IIKE+PYQTNK+ LV+KIAELVE+K
Sbjct: 317  NQGILEAYKSGRGRIVVRGKTDIETIDEKSKRTAIIIKEIPYQTNKATLVQKIAELVEDK 376

Query: 1352 SIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKL 1531
             +EGISDIRDESDRTGMR+VIELKR +D ++VLNNLYR TALQSSFSCNMV ILDGQPKL
Sbjct: 377  VLEGISDIRDESDRTGMRVVIELKRSADPAVVLNNLYRHTALQSSFSCNMVAILDGQPKL 436

Query: 1532 MGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYELL 1690
            MGLKE+LQAFLDFRCSVIERRAR+KLS A ERKHIVEGI++GL N+D V +++
Sbjct: 437  MGLKEILQAFLDFRCSVIERRARYKLSQALERKHIVEGIVIGLDNLDAVIQII 489



 Score =  367 bits (941), Expect(2) = 0.0
 Identities = 187/257 (72%), Positives = 218/257 (84%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I+IIRE+SN+T A+ AL  E+ LSEKQAEALLDITL+KLTSLE KKFVDE K ++E+ISK
Sbjct: 486  IQIIRETSNHTAATRALVNEFDLSEKQAEALLDITLKKLTSLERKKFVDEAKTMSEEISK 545

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            LNELLSSK  I Q+I++EA +LK+KF+T RR             ID+IPNEEMLL LSEK
Sbjct: 546  LNELLSSKKLIFQLIQQEAADLKSKFSTPRRSVIDDSISSEVDDIDIIPNEEMLLILSEK 605

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY KRM P TF+LQ+RGTIGKSVG MR+ND+ SDF+VC  HDHVLYFSD+G+VYSARAYK
Sbjct: 606  GYAKRMNPDTFSLQHRGTIGKSVGKMRMNDSTSDFIVCQTHDHVLYFSDKGIVYSARAYK 665

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPEC+RTA GTPLVQ+L L+DGERITSIIPVSEF E+QYLVMLT+NGYIKKV LN FS+I
Sbjct: 666  IPECTRTATGTPLVQLLPLSDGERITSIIPVSEFGENQYLVMLTVNGYIKKVPLNAFSSI 725

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGII+IQLVPGDELK
Sbjct: 726  RSTGIISIQLVPGDELK 742


>ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana]
            gi|110808536|sp|Q9CAF6.2|GYRA_ARATH RecName:
            Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
            gi|332641422|gb|AEE74943.1| DNA gyrase subunit A
            [Arabidopsis thaliana]
          Length = 950

 Score =  690 bits (1780), Expect(2) = 0.0
 Identities = 341/423 (80%), Positives = 381/423 (90%)
 Frame = +2

Query: 428  EETVSEERGGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVR 607
            +E V EE G     NG LV+   SG + +IVP ELHKEATE+YM+YA+SVLLGRALPDVR
Sbjct: 78   DEQVKEESGAN---NGGLVV---SGDESRIVPFELHKEATESYMSYALSVLLGRALPDVR 131

Query: 608  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSM 787
            DGLKPVHRRILFAMHELG+SS+KP+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQ FS+
Sbjct: 132  DGLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSL 191

Query: 788  RYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPA 967
            R PLI+GHGNFGSIDADPPAAMRYTECRL+PL EA+LL DL QDTVDFV NFDNSQKEPA
Sbjct: 192  RCPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPA 251

Query: 968  LLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDF 1147
            +LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLE MP PDF
Sbjct: 252  VLPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDF 311

Query: 1148 PTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEK 1327
            PTGG+IMGN G+L+AYR+G+GR+VVRGK +VELLD KTKR AVII E+PYQTNK+ LV+K
Sbjct: 312  PTGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQK 371

Query: 1328 IAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVG 1507
            IAELVENK++EGISDIRDESDR GMR+VIELKRG D ++VLNNLYR TALQSSFSCNMVG
Sbjct: 372  IAELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVG 431

Query: 1508 ILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYEL 1687
            I DG+PKLMGLKELLQAF+DFRCSV+ERRARFKLSHAQ+RKHI+EGI+VGL NVD V EL
Sbjct: 432  ICDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIEL 491

Query: 1688 LGK 1696
            + K
Sbjct: 492  ITK 494



 Score =  354 bits (909), Expect(2) = 0.0
 Identities = 178/257 (69%), Positives = 218/257 (84%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I +I ++S+++ A+AAL+ EYGLSEKQAEA+L+ITLR+LT+LE KKF DE   LTEQI+K
Sbjct: 489  IELITKASSHSSATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITK 548

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L +LLS++  IL++IE+EAIELK++F++ RR             IDVIPNEEML+A+SEK
Sbjct: 549  LEQLLSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAVSEK 608

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMK  TFNLQ+RGTIGKSVG +RV+D MSDFLVCHAHDHVL+FSDRG+VYS RAYK
Sbjct: 609  GYVKRMKADTFNLQHRGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYK 668

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSR AAGTPLVQILS+++GER+TSI+PVSEF ED+YL+MLT+NG IKKVSL  FS I
Sbjct: 669  IPECSRNAAGTPLVQILSMSEGERVTSIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGI 728

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQL  GDELK
Sbjct: 729  RSTGIIAIQLNSGDELK 745


>gb|AAG51377.1|AC011560_9 putative DNA gyrase subunit A; 1114-7603 [Arabidopsis thaliana]
          Length = 917

 Score =  690 bits (1780), Expect(2) = 0.0
 Identities = 341/423 (80%), Positives = 381/423 (90%)
 Frame = +2

Query: 428  EETVSEERGGGDEGNGSLVLKERSGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVR 607
            +E V EE G     NG LV+   SG + +IVP ELHKEATE+YM+YA+SVLLGRALPDVR
Sbjct: 78   DEQVKEESGAN---NGGLVV---SGDESRIVPFELHKEATESYMSYALSVLLGRALPDVR 131

Query: 608  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSM 787
            DGLKPVHRRILFAMHELG+SS+KP+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQ FS+
Sbjct: 132  DGLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSL 191

Query: 788  RYPLIRGHGNFGSIDADPPAAMRYTECRLEPLTEAMLLEDLHQDTVDFVPNFDNSQKEPA 967
            R PLI+GHGNFGSIDADPPAAMRYTECRL+PL EA+LL DL QDTVDFV NFDNSQKEPA
Sbjct: 192  RCPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPA 251

Query: 968  LLPARIPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDF 1147
            +LPAR+P LLLNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLE MP PDF
Sbjct: 252  VLPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDF 311

Query: 1148 PTGGLIMGNTGILEAYRSGKGRIVVRGKTDVELLDSKTKRTAVIIKEVPYQTNKSALVEK 1327
            PTGG+IMGN G+L+AYR+G+GR+VVRGK +VELLD KTKR AVII E+PYQTNK+ LV+K
Sbjct: 312  PTGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQK 371

Query: 1328 IAELVENKSIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVG 1507
            IAELVENK++EGISDIRDESDR GMR+VIELKRG D ++VLNNLYR TALQSSFSCNMVG
Sbjct: 372  IAELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVG 431

Query: 1508 ILDGQPKLMGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNVDGVYEL 1687
            I DG+PKLMGLKELLQAF+DFRCSV+ERRARFKLSHAQ+RKHI+EGI+VGL NVD V EL
Sbjct: 432  ICDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIEL 491

Query: 1688 LGK 1696
            + K
Sbjct: 492  ITK 494



 Score =  354 bits (909), Expect(2) = 0.0
 Identities = 178/257 (69%), Positives = 218/257 (84%)
 Frame = +1

Query: 1678 IRIIRESSNNTIASAALRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISK 1857
            I +I ++S+++ A+AAL+ EYGLSEKQAEA+L+ITLR+LT+LE KKF DE   LTEQI+K
Sbjct: 489  IELITKASSHSSATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITK 548

Query: 1858 LNELLSSKNQILQMIEKEAIELKNKFATSRRXXXXXXXXXXXXXIDVIPNEEMLLALSEK 2037
            L +LLS++  IL++IE+EAIELK++F++ RR             IDVIPNEEML+A+SEK
Sbjct: 549  LEQLLSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAVSEK 608

Query: 2038 GYLKRMKPSTFNLQNRGTIGKSVGTMRVNDTMSDFLVCHAHDHVLYFSDRGVVYSARAYK 2217
            GY+KRMK  TFNLQ+RGTIGKSVG +RV+D MSDFLVCHAHDHVL+FSDRG+VYS RAYK
Sbjct: 609  GYVKRMKADTFNLQHRGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYK 668

Query: 2218 IPECSRTAAGTPLVQILSLADGERITSIIPVSEFVEDQYLVMLTMNGYIKKVSLNYFSAI 2397
            IPECSR AAGTPLVQILS+++GER+TSI+PVSEF ED+YL+MLT+NG IKKVSL  FS I
Sbjct: 669  IPECSRNAAGTPLVQILSMSEGERVTSIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGI 728

Query: 2398 RATGIIAIQLVPGDELK 2448
            R+TGIIAIQL  GDELK
Sbjct: 729  RSTGIIAIQLNSGDELK 745