BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00009547
         (1905 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520518.1| protein with unknown function [Ricinus commu...   322   5e-85
ref|XP_007016334.1| Transcription initiation factor IIA subunit ...   316   2e-83
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241...   308   7e-81
ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prun...   289   4e-75
gb|EXC10718.1| Transcription initiation factor IIA large subunit...   288   5e-75
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   288   5e-75
ref|XP_004486980.1| PREDICTED: transcription initiation factor I...   288   8e-75
ref|XP_007150356.1| hypothetical protein PHAVU_005G146700g [Phas...   285   5e-74
ref|XP_004143132.1| PREDICTED: transcription initiation factor I...   281   6e-73
ref|XP_003547006.1| PREDICTED: transcription initiation factor I...   281   1e-72
ref|XP_004294662.1| PREDICTED: transcription initiation factor I...   275   7e-71
ref|XP_007150517.1| hypothetical protein PHAVU_005G159000g [Phas...   273   3e-70
ref|XP_003537974.1| PREDICTED: transcription initiation factor I...   272   4e-70
ref|XP_003597404.1| Transcription factor/ transcription initiati...   270   1e-69
ref|XP_003539601.1| PREDICTED: transcription initiation factor I...   263   2e-67
gb|AFW77526.1| transcription factor/ transcription initiation fa...   261   1e-66
ref|NP_001148522.1| LOC100282138 [Zea mays] gi|195619992|gb|ACG3...   261   1e-66
ref|XP_004962494.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   259   2e-66
ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutr...   259   4e-66
ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutr...   258   5e-66

>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
            gi|223540360|gb|EEF41931.1| protein with unknown function
            [Ricinus communis]
          Length = 383

 Score =  322 bits (824), Expect = 5e-85
 Identities = 190/375 (50%), Positives = 219/375 (58%), Gaps = 47/375 (12%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            VYI+VIEDV+NKVRDEF+ +G  E VL++LQA+WE KMM+ GVI GPIERSS  K V GG
Sbjct: 11   VYIHVIEDVVNKVRDEFINNGPGETVLNELQAIWELKMMQAGVICGPIERSSGAKTVPGG 70

Query: 419  SAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEH-SIYHLPT--PSD 589
              ITPVHDLNV                               G+ ++ S+Y++PT   S+
Sbjct: 71   -VITPVHDLNVPYEGTEEYETPTAEILFPPTPLPGTAQTPLPGSVDNSSMYNIPTGPTSE 129

Query: 590  YSTP-HDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQ 766
            Y TP  DSGG TE K GRPSPYMQPPSPW+NQRP  +DVN+AYVEGREEADRG S   NQ
Sbjct: 130  YPTPVSDSGGSTEAKAGRPSPYMQPPSPWINQRP-PLDVNIAYVEGREEADRGTS---NQ 185

Query: 767  PTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE-------------- 904
            P TQDFF   SGKRKREDFA Q    G++PQQDGAGD  ++V Q E              
Sbjct: 186  PLTQDFFTGASGKRKREDFAAQYNNGGFIPQQDGAGDTPFEVLQVERDTVISADIEILSS 245

Query: 905  ---------------------------LYPYQGVASEDYNTVNTPAGHELQAGTPAVAAX 1003
                                       +Y YQGVA+EDYN  NTPA ++LQA TPA+   
Sbjct: 246  VTRRGLKIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAIIPQ 305

Query: 1004 XXXXXXXXXXXXXXXXXXXXXXXXXXXXP--NTQHLVLAQFDKVSRTKSKWKCTLKDGIM 1177
                                           NTQHLVLAQFDKV+RTKS+WKCTLKDGIM
Sbjct: 306  NDVVDDDDDEPLNEDDDDDDDLDDVDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIM 365

Query: 1178 HINGKDILFTKATGE 1222
            HIN KDILF KATGE
Sbjct: 366  HINNKDILFNKATGE 380


>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
            gi|508786697|gb|EOY33953.1| Transcription initiation
            factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score =  316 bits (810), Expect = 2e-83
 Identities = 191/385 (49%), Positives = 218/385 (56%), Gaps = 57/385 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDVINKVRDEF+ +G   E VL++LQ +WE KMM+ GV+ GPIERSS  KQ   
Sbjct: 9    VYIHVIEDVINKVRDEFINNGGPGETVLNELQGIWEMKMMQAGVVCGPIERSSGQKQPTP 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
            G  ITPVHDLNV                               G+A+ S+Y++PT  SDY
Sbjct: 69   GGPITPVHDLNVPYEGPEEYETPTADMLFPPTPLQTPVPTPLPGSADGSMYNIPTGSSDY 128

Query: 593  STP-HDSGGVTEVKPGRPSPYMQPPSPWMNQR-PLGVDVNVAYVEGREEADRGASHQPNQ 766
             TP  D GG T+ K  RPSPYMQ PSPW NQR PL VDVNVAYVEGR+E DRG SH   Q
Sbjct: 129  PTPVTDGGGNTDAKGARPSPYMQSPSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSH---Q 185

Query: 767  PTTQDFFVVPSGKRKREDFAPQI-PGSGYMPQQDGAGDATYDVFQSE------------- 904
            P TQDFF++ SGKRKREDF  Q   G GY+PQQDGAGDA Y+V ++E             
Sbjct: 186  PLTQDFFMMSSGKRKREDFTTQYHNGGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDS 245

Query: 905  --------------------------------------LYPYQGVASEDYNTVNTPAGHE 970
                                                  +Y YQGV +EDYN VNTPA ++
Sbjct: 246  TTTAKSEILAHLARSSSKIPQLDGPIPDPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPND 305

Query: 971  LQAGTPA-VAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSK 1147
            LQA TPA VA                               NTQHLVLAQFDKV+RTKS+
Sbjct: 306  LQAATPAPVAQNDTGDDDDDEPLNEDDDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSR 365

Query: 1148 WKCTLKDGIMHINGKDILFTKATGE 1222
            WKCTLKDGIMHIN KDILF KATGE
Sbjct: 366  WKCTLKDGIMHINNKDILFNKATGE 390


>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
            gi|297746029|emb|CBI16085.3| unnamed protein product
            [Vitis vinifera]
          Length = 393

 Score =  308 bits (788), Expect = 7e-81
 Identities = 181/384 (47%), Positives = 214/384 (55%), Gaps = 56/384 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VY++VIEDVINKVRDEF+ +G   E VLS+LQ +WE KM++ GV++GPIERS+  KQ +G
Sbjct: 10   VYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIERSTAPKQTSG 69

Query: 416  GSAITP-VHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSD 589
              A TP VHDLNV                               G  ++S+Y++PT P++
Sbjct: 70   APAPTPPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGMGDNSMYNIPTGPTE 129

Query: 590  YSTPHDSGGVTEVKPGRPSPYMQPPSPWMNQRP-LGVDVNVAYVEGREEADRGASHQPNQ 766
            Y    D GG T++K GRP  YM PPSPWM QRP L VDVNVAYVEGR+E DRG S QP  
Sbjct: 130  YPAAQDGGGATDMKSGRPPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQP-- 187

Query: 767  PTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE-------------- 904
              TQDFF++ SGKRKREDF  Q   SGY+PQQDGAGD   +VF+ E              
Sbjct: 188  -LTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDIL 246

Query: 905  -------------------------------------LYPYQGVASEDYNTVNTPAGHEL 973
                                                 +Y YQGV +EDYN VNTPA +++
Sbjct: 247  TKANREIFPQVAGSYVRIPQLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDI 306

Query: 974  QAGTPAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-NTQHLVLAQFDKVSRTKSKW 1150
            QAGTPAV                                 NTQHLVLAQFDKV+RTKSKW
Sbjct: 307  QAGTPAVGIQNDVGDDDDDEPPLNENDDDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKW 366

Query: 1151 KCTLKDGIMHINGKDILFTKATGE 1222
            KCTLKDGIMHIN KDILF KA GE
Sbjct: 367  KCTLKDGIMHINNKDILFNKANGE 390


>ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prunus persica]
            gi|462400973|gb|EMJ06530.1| hypothetical protein
            PRUPE_ppa006992mg [Prunus persica]
          Length = 386

 Score =  289 bits (739), Expect = 4e-75
 Identities = 174/382 (45%), Positives = 206/382 (53%), Gaps = 54/382 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            VY++VIEDVINKVR+EF+ SG  E VL +LQ  WE KMM+ GV++ PIER+  +K    G
Sbjct: 8    VYVSVIEDVINKVREEFMNSGPGEDVLKELQGTWEAKMMQAGVVNTPIERAVASKPTP-G 66

Query: 419  SAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDYS 595
            SAITPVHDLNV                               GT + ++Y++PT  SD+S
Sbjct: 67   SAITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGTGD-NLYNIPTGGSDFS 125

Query: 596  T------PHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQ 757
                     + G  TE+K GRPSPYMQPPSPWMN RP  +DVN+AYVEGR+E DRG SH 
Sbjct: 126  ASANESGSSNGGSNTELKAGRPSPYMQPPSPWMNHRP-PLDVNIAYVEGRDEVDRGTSH- 183

Query: 758  PNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE----------- 904
              QP TQDFF + SGKRKRED A Q P  G++PQQDGAGDA  +VF+ E           
Sbjct: 184  --QPPTQDFFQMNSGKRKREDLASQYPAGGFIPQQDGAGDAAPEVFEIEVSGGSTSIGGR 241

Query: 905  -----------------------------------LYPYQGVASEDYNTVNTPAGHELQA 979
                                               +Y YQG  +EDYN  NTP  ++L  
Sbjct: 242  ACSEMVTCALRSTPKIPQLDGPIPDPYDDALSTPNIYNYQGTFNEDYNVANTPTPNDLPV 301

Query: 980  GTPA-VAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKC 1156
             TPA V                                NT HLVLAQFDKV+RTKS+WKC
Sbjct: 302  STPAPVVQNDVGDDDDDEPPLNENDDDDLDDVDQGEEVNTHHLVLAQFDKVTRTKSRWKC 361

Query: 1157 TLKDGIMHINGKDILFTKATGE 1222
            TLKDGIM IN KDILF KATGE
Sbjct: 362  TLKDGIMRINNKDILFNKATGE 383


>gb|EXC10718.1| Transcription initiation factor IIA large subunit [Morus notabilis]
          Length = 404

 Score =  288 bits (738), Expect = 5e-75
 Identities = 174/383 (45%), Positives = 207/383 (54%), Gaps = 59/383 (15%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            VY++VIEDVI+KVRDEF+ +G  E VL +LQ +WE KMM  GV++ PIERS   K   GG
Sbjct: 8    VYVSVIEDVISKVRDEFINNGPGEDVLKELQGMWEAKMMHAGVVNSPIERSGAAKPTPGG 67

Query: 419  SAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY- 592
              ITPVHDLNV                               GTA+  IY++PT P+DY 
Sbjct: 68   -PITPVHDLNVPYEGTEEYETPTADMLFPPTPLQTPIQTPLPGTAD--IYNIPTGPTDYP 124

Query: 593  ----STPH------DSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADR 742
                 TP         GG T++K GRPSPYMQPPSPWM+QRP  +DVN+AYVEGR+E DR
Sbjct: 125  ASGNETPSGGGGGGGGGGNTDMKGGRPSPYMQPPSPWMSQRP-SLDVNIAYVEGRDEVDR 183

Query: 743  GASHQPNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE------ 904
            G SH   QP TQDFF+ PSGKRKR++   Q    G++PQQDGAGD   +VF+ E      
Sbjct: 184  GTSH---QPPTQDFFMPPSGKRKRDELPSQYQAGGFLPQQDGAGDVAPEVFEIEVIGGST 240

Query: 905  ----------------------------------------LYPYQGVASEDYNTVNTPAG 964
                                                    +Y YQGV +EDYN  NTPA 
Sbjct: 241  SDGTRGNSEILASVLGVSSKIPQLDGPIPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAP 300

Query: 965  HELQAGTPAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-NTQHLVLAQFDKVSRTK 1141
            ++L AGTPA+ A                               NTQHLVLAQFDKV+RTK
Sbjct: 301  NDLPAGTPAIPAPNDVGEDDDDEPPLNENDDDELDDIDQGEELNTQHLVLAQFDKVTRTK 360

Query: 1142 SKWKCTLKDGIMHINGKDILFTK 1210
            S+WKCTLKDGIM IN KDILF K
Sbjct: 361  SRWKCTLKDGIMRINNKDILFNK 383


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoformX1 [Glycine max]
          Length = 391

 Score =  288 bits (738), Expect = 5e-75
 Identities = 178/385 (46%), Positives = 207/385 (53%), Gaps = 57/385 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDV+ KVRDEF+ +G   E VL +LQA+WE KMM+ G + GPIERS+  K   G
Sbjct: 9    VYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSTAAKPTPG 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
            G  ITPVHDLNV                               GT ++S Y++PT PSDY
Sbjct: 69   GP-ITPVHDLNVPYEGTDEYETPTADMLFPPTPLQTPIQTPLPGTGDNSTYNIPTGPSDY 127

Query: 593  -STPHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQP 769
             S+ +D+GG  + K  RP+PYMQ PSPWMNQRP  +DVNVAYVEGR+EADRG S   NQP
Sbjct: 128  PSSGNDTGGNADGKGARPAPYMQSPSPWMNQRP-PLDVNVAYVEGRDEADRGTS---NQP 183

Query: 770  TTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE--------------- 904
             TQDFF +PSGKRKR D   Q    GY+PQQDGAGDAT+  F+ E               
Sbjct: 184  PTQDFFTMPSGKRKRNDLTSQYNAGGYIPQQDGAGDATHGDFEIEVSGRGISINSHHTIS 243

Query: 905  ----------------------------------LYPYQGVASEDYNTVNTPAGHELQAG 982
                                              +Y Y  V SEDYN  NTPA  E+ A 
Sbjct: 244  KGKMSADLERSTSRIPQLDGPIPYDDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPAS 303

Query: 983  TPAV-----AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSK 1147
            TPA+                                     NT HLVLAQFDKV+RTKS+
Sbjct: 304  TPALLVQNEVGNDFDDDDDDEPPLNEEDDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSR 363

Query: 1148 WKCTLKDGIMHINGKDILFTKATGE 1222
            WKCTLKDGIMHIN KDILF KATGE
Sbjct: 364  WKCTLKDGIMHINNKDILFNKATGE 388


>ref|XP_004486980.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Cicer arietinum]
          Length = 389

 Score =  288 bits (736), Expect = 8e-75
 Identities = 178/382 (46%), Positives = 205/382 (53%), Gaps = 54/382 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDV+ KVRDEF  +G   E VL +LQA+WE KM++ G + GPIERSS   +   
Sbjct: 9    VYIDVIEDVMVKVRDEFTNNGGPGEEVLRELQAIWESKMIQAGAVLGPIERSSGANKPTP 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
            G  ITPVHDLNV                               GT +   Y++PT PSDY
Sbjct: 69   GGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGTGDTPTYNIPTGPSDY 128

Query: 593  -STPHDS-GGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQ 766
             S+ +D+ GG  +VK GRP  YMQPPSPW+NQRP  +DVNVAYVEGREEADRGAS   NQ
Sbjct: 129  PSSGNDTAGGNADVKGGRPGTYMQPPSPWINQRP-PLDVNVAYVEGREEADRGAS---NQ 184

Query: 767  PTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE-------------- 904
            P TQDFF +P GKRKR D  PQ    GY+PQQDG+GDA    F+ E              
Sbjct: 185  PMTQDFFTMPGGKRKRNDLPPQYDAGGYIPQQDGSGDAASGNFEIEVCGGGISINSQHTS 244

Query: 905  ----------------------------------LYPYQGVASEDYNTVNTPAGHELQAG 982
                                              +Y Y GV SEDYN  NTPA  E+ A 
Sbjct: 245  FKGKMPADLERLASRIPQLDGPIPYEDDVLSTPNIYNYGGVYSEDYNIANTPAPPEVPAS 304

Query: 983  TPAVAA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKC 1156
            TPA+ A                                NT HLVLAQFDKV+RTKS+WKC
Sbjct: 305  TPALVAQNEVANEDDDDEPPLNENDDDDMDDLDQGDDQNTHHLVLAQFDKVTRTKSRWKC 364

Query: 1157 TLKDGIMHINGKDILFTKATGE 1222
            TLKDGIMHIN KDILF KATGE
Sbjct: 365  TLKDGIMHINNKDILFNKATGE 386


>ref|XP_007150356.1| hypothetical protein PHAVU_005G146700g [Phaseolus vulgaris]
            gi|561023620|gb|ESW22350.1| hypothetical protein
            PHAVU_005G146700g [Phaseolus vulgaris]
          Length = 386

 Score =  285 bits (729), Expect = 5e-74
 Identities = 178/382 (46%), Positives = 207/382 (54%), Gaps = 54/382 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDV+ KVRDEF+ +G   E VL +LQA+WE KMM+ G + GPIERS+  K   G
Sbjct: 9    VYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSAAAKPTPG 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
            G  ITPVHDLN+                               GT ++S Y++PT PSDY
Sbjct: 69   G-PITPVHDLNM--PYTEEYETPTAEMLFPPTPLQTPIQTPLPGTGDNSTYNIPTGPSDY 125

Query: 593  -STPHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQP 769
             S+ +D+GG  + K GRP+PYM+PPSPWMN RP  +DVNVAYVEGR+EADRG S   NQP
Sbjct: 126  PSSGNDNGGNADGKGGRPAPYMKPPSPWMNPRP-PLDVNVAYVEGRDEADRGTS---NQP 181

Query: 770  TTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE--------------- 904
             TQDFF + SGKRKR D   Q    GY+PQQDGAGDA   VF+ E               
Sbjct: 182  LTQDFFTMSSGKRKRNDLTSQYNSGGYIPQQDGAGDAALGVFEIEVNGGDISINSHHTIS 241

Query: 905  ---------------------------------LYPYQGVASEDYNTVNTPAGHELQAGT 985
                                             +Y Y  V SEDYN  NTPA  E+ A T
Sbjct: 242  KAKVPADLERLTSRIPQLDGPIPYEDDALSTPNIYNYGEVFSEDYNISNTPAPPEVPAST 301

Query: 986  PAVAA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKC 1156
            PA+ A                                 NT HLVLAQFDKVSRTKS+WKC
Sbjct: 302  PALVAQNEVGNDDDDDDEPPLNEEDDDDLDDIEQGDDQNTHHLVLAQFDKVSRTKSRWKC 361

Query: 1157 TLKDGIMHINGKDILFTKATGE 1222
            TLKDGIMHIN KDILF KATGE
Sbjct: 362  TLKDGIMHINNKDILFNKATGE 383


>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Cucumis sativus] gi|449496658|ref|XP_004160191.1|
            PREDICTED: transcription initiation factor IIA large
            subunit-like [Cucumis sativus]
          Length = 402

 Score =  281 bits (720), Expect = 6e-73
 Identities = 178/396 (44%), Positives = 215/396 (54%), Gaps = 68/396 (17%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            +YINVIEDVINK+RDEF+ +G  E VL +LQ +WE KMM+ G ++GPIERS+ +K   GG
Sbjct: 8    IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSKPTPGG 67

Query: 419  SAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDYS 595
              ITPVHDLNV                               GTA++++Y++PT PSD+S
Sbjct: 68   P-ITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGPSDHS 126

Query: 596  -----------TPHDSGGVT-EVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREE-A 736
                       TP  SG    EV+ GRP+PYMQPPS WM QR   VDVN+AYVEGREE A
Sbjct: 127  ASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPS-WMGQRT-PVDVNIAYVEGREEAA 184

Query: 737  DRGASHQPNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE---- 904
            DRGA+   +   TQDFF++ SGKRKR+DFA Q   +G++PQQDGAGDA   VF+ E    
Sbjct: 185  DRGAA-GAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEISGC 243

Query: 905  -----------------------------------------------LYPYQGVASEDYN 943
                                                           +Y YQGV +EDYN
Sbjct: 244  NSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNEDYN 303

Query: 944  TVNTPAGHELQAGTPAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP---NTQHLVLA 1114
              NTPA ++  AGTPAV                                   +TQHLVLA
Sbjct: 304  IANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLA 363

Query: 1115 QFDKVSRTKSKWKCTLKDGIMHINGKDILFTKATGE 1222
            QFDKV+RTKS+WKCTLKDGIMHIN KDILF KATGE
Sbjct: 364  QFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 399


>ref|XP_003547006.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Glycine max]
          Length = 390

 Score =  281 bits (718), Expect = 1e-72
 Identities = 176/384 (45%), Positives = 205/384 (53%), Gaps = 56/384 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDV+ KVRDEF+ +G   E VL +LQA+WE KMM+ G + GPIERSS  K   G
Sbjct: 9    VYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSSAAKATPG 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
            G  ITPVHDLNV                               GT ++S Y++PT  +DY
Sbjct: 69   GP-ITPVHDLNVPYEGTEEYETPTADMLFPPTPLQTPIQTPLPGTGDNSTYNIPTGANDY 127

Query: 593  -STPHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQP 769
             S+ +D+GG  + K  RP+PYMQP SPWMNQRP  +DVNVAYVEGR+EAD+G S   NQP
Sbjct: 128  PSSGNDTGGNADGKGARPAPYMQPSSPWMNQRP-PLDVNVAYVEGRDEADKGTS---NQP 183

Query: 770  TTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE--------------- 904
             TQDFF   SGKRKR D   Q    GY+PQQDGAGDA + VF+ E               
Sbjct: 184  LTQDFFTRTSGKRKRNDLTSQYNVGGYIPQQDGAGDAAHGVFEIEVSGGGISINSHHTIS 243

Query: 905  ---------------------------------LYPYQGVASEDYNTVNTPAGHELQAGT 985
                                             +Y Y  V SEDYN  NTPA  E+ A T
Sbjct: 244  KEKMSADLERSTSRIPQLDGPIPYDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPAST 303

Query: 986  PAVAA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKW 1150
            PA+ A                                   NT HLVLAQFDKV+RTKS+W
Sbjct: 304  PALLAQNEVGNDFDDDDDDEPPLNEEDDDDLDDMEQGDDQNTHHLVLAQFDKVARTKSRW 363

Query: 1151 KCTLKDGIMHINGKDILFTKATGE 1222
            KCTLKDGIMHIN KDILF KATGE
Sbjct: 364  KCTLKDGIMHINNKDILFNKATGE 387


>ref|XP_004294662.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Fragaria vesca subsp. vesca]
          Length = 377

 Score =  275 bits (702), Expect = 7e-71
 Identities = 167/378 (44%), Positives = 201/378 (53%), Gaps = 50/378 (13%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            VYI+VIEDVINKV++EF  +G  E VL +LQ  WE KMM+ GV++ PIERS+  K   G 
Sbjct: 7    VYISVIEDVINKVKEEFA-NGAGEDVLKELQGTWEAKMMQAGVVNAPIERSAAAKPTPG- 64

Query: 419  SAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GTAEHSIYH 571
              +TPVHDLNV                                        GTAE   Y+
Sbjct: 65   --VTPVHDLNVPYEGTEEYETPTADLLFPPTPAPTPIPQTPLQPQTPGQTPGTAE--TYN 120

Query: 572  LPT-PSDYSTPHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGA 748
            +PT  SD S   ++G  T++KPGRPSPYMQPPSPWM QRP  +DVN+AYVEGR+E DRGA
Sbjct: 121  IPTGASDDSAGGNAGANTDLKPGRPSPYMQPPSPWMTQRP-PLDVNIAYVEGRDEVDRGA 179

Query: 749  SHQPNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE-------- 904
            SHQP    TQDFF + +GKRKRE+  PQ    G++PQQDGA DA  + F+ E        
Sbjct: 180  SHQP---PTQDFFTMSAGKRKREEIPPQYQAGGFIPQQDGAADAIPEFFEIEICGGSTSI 236

Query: 905  --------------------------------LYPYQGVASEDYNTVNTPAGHELQAGTP 988
                                            +Y YQG  +EDYN  NTPA +++     
Sbjct: 237  GRAYGKMSACTPKIPQLDGPIPDPYEELSTPNIYNYQGAFNEDYNIANTPAPNDVPVTPA 296

Query: 989  AVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKCTLKD 1168
             V                                NTQHLVLAQFDKV+RTKS+WKCTLKD
Sbjct: 297  PVVNDVGDDDEDDEPPLNENDDDDQDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKD 356

Query: 1169 GIMHINGKDILFTKATGE 1222
            GIMHIN KD+LF KATGE
Sbjct: 357  GIMHINNKDVLFNKATGE 374


>ref|XP_007150517.1| hypothetical protein PHAVU_005G159000g [Phaseolus vulgaris]
            gi|561023781|gb|ESW22511.1| hypothetical protein
            PHAVU_005G159000g [Phaseolus vulgaris]
          Length = 385

 Score =  273 bits (697), Expect = 3e-70
 Identities = 172/382 (45%), Positives = 203/382 (53%), Gaps = 54/382 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDV+ KVRDEF+ +G   E VL +LQA+WE KMM+ G + GPIERS+  K   G
Sbjct: 9    VYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSTAAKPTPG 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
               ITPVHDLN+                               GT ++S Y++PT PS+Y
Sbjct: 69   --PITPVHDLNM--PYTEEYETPTAEMLFPPTPLQTPIQTPLPGTGDNSTYNIPTGPSEY 124

Query: 593  -STPHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQP 769
             S+ +D+GG  + K GRP+ YMQPPSPWMN RP  +DVNVAYVEGR+EADRG S   NQP
Sbjct: 125  PSSGNDTGGNADGKGGRPATYMQPPSPWMNPRP-SLDVNVAYVEGRDEADRGTS---NQP 180

Query: 770  TTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE--------------- 904
             TQDFF + SGKRKR D        GY+PQQDGAGDA   VF+ E               
Sbjct: 181  LTQDFFTMSSGKRKRNDLPSHHNAGGYIPQQDGAGDAALGVFEIEVNGGDISINSHHTIS 240

Query: 905  --------------------------------LYPYQGVASEDYNTVNTPAGHELQAGTP 988
                                            +Y Y  V S+DYN  NTPA  E+   TP
Sbjct: 241  KGKMQADLERLTTRIPQLDGPIPYDDELSTPNIYNYGEVFSDDYNISNTPAPPEVPVSTP 300

Query: 989  AVAA----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKC 1156
            A+ A                                  NT HLVLAQFDKV+RTKS+WKC
Sbjct: 301  ALLAQNEVGNDEDDDDDEPPLNEEDDDELDDMEQGDDQNTHHLVLAQFDKVTRTKSRWKC 360

Query: 1157 TLKDGIMHINGKDILFTKATGE 1222
            TLKDGIMHIN KDILF KATGE
Sbjct: 361  TLKDGIMHINNKDILFNKATGE 382


>ref|XP_003537974.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoform X1 [Glycine max]
          Length = 392

 Score =  272 bits (695), Expect = 4e-70
 Identities = 173/386 (44%), Positives = 205/386 (53%), Gaps = 58/386 (15%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI VI+DV+NKVRDEF+ +G   + VL +LQ++WE KMM+ G I GPIERS   K   G
Sbjct: 9    VYIQVIDDVMNKVRDEFVNNGGPGDEVLKELQSIWESKMMQAGAIVGPIERSGAPKPTPG 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
            G  ITPVHDLN+                               GT ++S+Y++PT PSDY
Sbjct: 69   GP-ITPVHDLNMPYEGTEEYETPTAEMLFPPTPLQTPLQTPLPGTVDNSMYNIPTGPSDY 127

Query: 593  -STPHDSGGVTEVKPGRPSPYMQPP-SPWMNQRP-----LGVDVNVAYVEGREEADRGAS 751
             S  ++ G   E+K GRP PYMQPP SPW NQ         +DVNVAYVEGR+EA+RGAS
Sbjct: 128  PSAGNEPGANNEIKGGRPGPYMQPPPSPWTNQNQNQNQRAPLDVNVAYVEGRDEAERGAS 187

Query: 752  HQPNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSELY------- 910
               NQP TQDFF+  SGKRKR++ A Q    GY+PQQDGAGDA   + + E+Y       
Sbjct: 188  ---NQPLTQDFFM-SSGKRKRDEIASQYNAGGYIPQQDGAGDAASQILEIEVYGGGMSID 243

Query: 911  ----------------------------PYQ------------GVASEDYNTVNTPAGHE 970
                                        PY             GV +EDYN  NTPA  E
Sbjct: 244  AGHSTSKGKMPAQSDRPASQIPQLDGPIPYDDDVLSTPNIYNYGVFNEDYNIANTPAPSE 303

Query: 971  LQAGTPAVAA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKS 1144
            + A TPA  A                                NT HLVLAQFDKV+RTKS
Sbjct: 304  VPASTPAPIAQNEVDEEDDDDEPPLNENDDDDLDDLDQGEDQNTHHLVLAQFDKVTRTKS 363

Query: 1145 KWKCTLKDGIMHINGKDILFTKATGE 1222
            +WKCTLKDGIMHIN KDILF KATGE
Sbjct: 364  RWKCTLKDGIMHINNKDILFNKATGE 389


>ref|XP_003597404.1| Transcription factor/ transcription initiation factor [Medicago
            truncatula] gi|355486452|gb|AES67655.1| Transcription
            factor/ transcription initiation factor [Medicago
            truncatula] gi|388523053|gb|AFK49588.1| unknown [Medicago
            truncatula]
          Length = 388

 Score =  270 bits (691), Expect = 1e-69
 Identities = 172/383 (44%), Positives = 205/383 (53%), Gaps = 55/383 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEG--VLSQLQALWEHKMMECGVISGPIERSS-LNKQV 409
            VYI+VIEDV+ KVRDEF+ +G   G  VL +LQA+WE K ++ G + GPIER++ +N+ +
Sbjct: 9    VYIDVIEDVMVKVRDEFVNTGASPGDEVLRELQAIWESKCIQAGAVLGPIERNTGVNRPM 68

Query: 410  AGGSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PS 586
             GG  ITPVHDLNV                               G  E   Y++PT PS
Sbjct: 69   PGGP-ITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGPGETPNYNIPTGPS 127

Query: 587  DYSTPHDSGGVTEVKPGRPSPYMQPPSPWMN--QRPLGVDVNVAYVEGREEADRGASHQP 760
            DYS+ +D+GG  +VK GR + +M PPSPWMN  QRP  +DVNVAYVEGR+EADRGAS   
Sbjct: 128  DYSSGNDAGGNADVKGGRQA-FMPPPSPWMNMNQRP-PLDVNVAYVEGRDEADRGAS--- 182

Query: 761  NQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSE------------ 904
            NQP TQDFF +  GKRKR D  P     GY+PQQDGAGDA    F+ E            
Sbjct: 183  NQPMTQDFFTMTGGKRKRNDLPPPYDAGGYIPQQDGAGDAVSGDFEIEVCGGSISFNSQH 242

Query: 905  ------------------------------------LYPYQGVASEDYNTVNTPAGHELQ 976
                                                +Y Y GV +EDYN  NTPA  E+ 
Sbjct: 243  TNSKGKMPADLERLASRIPQLDGPIPYEDDVLSTPNIYNYGGVFNEDYNIANTPAPPEVP 302

Query: 977  AGTPA-VAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWK 1153
            A TPA VA                               +T HLVLAQFDKV+RTKS+WK
Sbjct: 303  ASTPALVAQNEAVNEDEDDEPLNEDDDDDLDDLDQEDDQDTNHLVLAQFDKVTRTKSRWK 362

Query: 1154 CTLKDGIMHINGKDILFTKATGE 1222
            CTLKDGIMHIN KDILF KATGE
Sbjct: 363  CTLKDGIMHINKKDILFNKATGE 385


>ref|XP_003539601.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoformX2 [Glycine max]
          Length = 389

 Score =  263 bits (672), Expect = 2e-67
 Identities = 168/384 (43%), Positives = 203/384 (52%), Gaps = 56/384 (14%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI VI+DV+ KVRDEF+ +G   + VL +LQ++WE KM++ G I GPIERS   K   G
Sbjct: 9    VYIQVIDDVMIKVRDEFVNNGGPGDEVLKELQSIWESKMLQAGAIVGPIERSGAPKPTPG 68

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSDY 592
            G  ITPVHDLN+                               GT ++S+Y++PT PSDY
Sbjct: 69   GP-ITPVHDLNMPYEGTEEYETPTAEMLFPPTPLQTPLQTPLPGTVDNSMYNIPTGPSDY 127

Query: 593  -STPHDSGGVTEVKPGRPSPYMQPPSPWMNQRP---LGVDVNVAYVEGREEADRGASHQP 760
             S  ++ G   E+K GRP PYMQPP PW +Q       +DVNVAYVEGR+ A+RGAS   
Sbjct: 128  PSAGNEPGENNEIKGGRPGPYMQPP-PWTSQNQNQRAPLDVNVAYVEGRDAAERGAS--- 183

Query: 761  NQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSELY---------- 910
            NQP TQDFF+  SGKRKR++ A Q    GY+PQQDGAGDA   +F+ E+Y          
Sbjct: 184  NQPLTQDFFM-SSGKRKRDEIASQYNAGGYIPQQDGAGDADSQIFEIEVYGGGISIDAGH 242

Query: 911  -------------------------PYQ------------GVASEDYNTVNTPAGHELQA 979
                                     PY             GV +EDYN  NTPA  ++ A
Sbjct: 243  STSNGKMPAHSDRPASQIPQFDGPIPYDDDVVSTPNMYNYGVFNEDYNIANTPASSDVPA 302

Query: 980  GTPAVAA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKW 1150
             TPA  A                                 NT HLVLAQFDKV+RTKS+W
Sbjct: 303  STPAPVAQNEVDEEDDDDDEPLNENDDDDDLDDLDQGEDQNTHHLVLAQFDKVTRTKSRW 362

Query: 1151 KCTLKDGIMHINGKDILFTKATGE 1222
            KCTLKDGIMHIN KDILF KATGE
Sbjct: 363  KCTLKDGIMHINNKDILFNKATGE 386


>gb|AFW77526.1| transcription factor/ transcription initiation factor [Zea mays]
          Length = 438

 Score =  261 bits (666), Expect = 1e-66
 Identities = 163/387 (42%), Positives = 204/387 (52%), Gaps = 59/387 (15%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            VYI+VI+DVI+KVR++F+  GV + VL++LQALWE KM+ CG ISG IER+      AGG
Sbjct: 54   VYISVIDDVISKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIERTKAAAASAGG 113

Query: 419  SAIT--PVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSD 589
            ++ T  PVHDLNV                                  +  +Y++PT PSD
Sbjct: 114  TSGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQTPLPGTDTGMYNIPTGPSD 173

Query: 590  YSTPHDS---GGVT----EVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGA 748
            Y+    S    G+T    + K GRPSPYM PPSPWMNQRPLGVDVNVAYVEGRE+ DRG 
Sbjct: 174  YAPSPISDIRNGMTINGADPKAGRPSPYMPPPSPWMNQRPLGVDVNVAYVEGREDPDRGV 233

Query: 749  SHQPNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQS--------- 901
              QP QP TQDF  + SGKRKR+++  Q+P   ++PQQDG+ D   +   S         
Sbjct: 234  --QP-QPLTQDFLTMSSGKRKRDEYPGQLPSGSFVPQQDGSADQIVEFVVSKENANQHWS 290

Query: 902  ----------------------------ELYPYQGVASEDYNTVNTPAGHELQAGTPAVA 997
                                        + + + GV +EDYNT    A  E +A TPAV 
Sbjct: 291  SIINKLETPTKTVTPVIPQCDGIQDDYNDQFFFPGVPTEDYNTPGESA--EYRAPTPAVG 348

Query: 998  A------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTK 1141
                                                      PNTQHLVLAQFDKV+RTK
Sbjct: 349  TPKPRNDAGDDNDDDDDDEEPPLNEDDDDDDDLDDLEEGEDEPNTQHLVLAQFDKVTRTK 408

Query: 1142 SKWKCTLKDGIMHINGKDILFTKATGE 1222
            ++WKCTLKDGIMH+NG+D+LF KATGE
Sbjct: 409  NRWKCTLKDGIMHLNGRDVLFNKATGE 435


>ref|NP_001148522.1| LOC100282138 [Zea mays] gi|195619992|gb|ACG31826.1| transcription
            factor/ transcription initiation factor [Zea mays]
          Length = 393

 Score =  261 bits (666), Expect = 1e-66
 Identities = 163/387 (42%), Positives = 204/387 (52%), Gaps = 59/387 (15%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            VYI+VI+DVI+KVR++F+  GV + VL++LQALWE KM+ CG ISG IER+      AGG
Sbjct: 9    VYISVIDDVISKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIERTKAAAASAGG 68

Query: 419  SAIT--PVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSD 589
            ++ T  PVHDLNV                                  +  +Y++PT PSD
Sbjct: 69   TSGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQTPLPGTDTGMYNIPTGPSD 128

Query: 590  YSTPHDS---GGVT----EVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGA 748
            Y+    S    G+T    + K GRPSPYM PPSPWMNQRPLGVDVNVAYVEGRE+ DRG 
Sbjct: 129  YAPSPISDIRNGMTINGADPKAGRPSPYMPPPSPWMNQRPLGVDVNVAYVEGREDPDRGV 188

Query: 749  SHQPNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQS--------- 901
              QP QP TQDF  + SGKRKR+++  Q+P   ++PQQDG+ D   +   S         
Sbjct: 189  --QP-QPLTQDFLTMSSGKRKRDEYPGQLPSGSFVPQQDGSADQIVEFVVSKENANQHWS 245

Query: 902  ----------------------------ELYPYQGVASEDYNTVNTPAGHELQAGTPAVA 997
                                        + + + GV +EDYNT    A  E +A TPAV 
Sbjct: 246  SIINKLETPTKTVTPVIPQCDGIQDDYNDQFFFPGVPTEDYNTPGESA--EYRAPTPAVG 303

Query: 998  A------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTK 1141
                                                      PNTQHLVLAQFDKV+RTK
Sbjct: 304  TPKPRNDAGDDNDDDDDDEEPPLNEDDDDDDDLDDLEEGEDEPNTQHLVLAQFDKVTRTK 363

Query: 1142 SKWKCTLKDGIMHINGKDILFTKATGE 1222
            ++WKCTLKDGIMH+NG+D+LF KATGE
Sbjct: 364  NRWKCTLKDGIMHLNGRDVLFNKATGE 390


>ref|XP_004962494.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIA
            subunit 1-like [Setaria italica]
          Length = 436

 Score =  259 bits (663), Expect = 2e-66
 Identities = 161/381 (42%), Positives = 201/381 (52%), Gaps = 53/381 (13%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVEEGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAGG 418
            VYI+VI+DVI+KVR++F+  GV + VL++LQALWE KM+ CG ISG I+R+       GG
Sbjct: 58   VYISVIDDVISKVREDFITYGVGDAVLNELQALWEMKMLHCGAISGNIDRTKAVGASTGG 117

Query: 419  SA--ITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHSIYHLPT-PSD 589
            +A    PVHDLNV                                  +  +Y++PT PSD
Sbjct: 118  TAGATPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQTPLPGTDAGMYNIPTGPSD 177

Query: 590  YSTPHDSG-------GVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGA 748
            Y+    S           + K GRPSPYM PPSPWMNQRPLGVDVNVAYVEGRE+ DRG 
Sbjct: 178  YAPSPISDVRNGMVINGADPKTGRPSPYMPPPSPWMNQRPLGVDVNVAYVEGREDPDRGV 237

Query: 749  SHQPNQPTTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDATYDVFQSELYPYQ--- 919
              QP QP TQDF ++ SGKRKR+++  Q+P   ++PQQDG+ D   +   S+   +Q   
Sbjct: 238  --QP-QPLTQDFLMMSSGKRKRDEYPGQLPSGSFVPQQDGSADQIVEFAVSKENAHQLWS 294

Query: 920  ----------------------------------GVASEDYNTVNTPAGHELQAGTPAVA 997
                                              GV +EDYNT    A  E +A TPAVA
Sbjct: 295  SIMNKQETSTKSVTPVIPQRDGIQDDYNDQFFFPGVPTEDYNTPGESA--EYRAPTPAVA 352

Query: 998  A------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKCT 1159
                                                PNTQHLVLAQFDKV+RTK++WKCT
Sbjct: 353  TPKPRNDEGDDDDEPPLNEDDDDDDELDDLEQGEDEPNTQHLVLAQFDKVTRTKNRWKCT 412

Query: 1160 LKDGIMHINGKDILFTKATGE 1222
            LKDGIMH+NG+D+LF KATGE
Sbjct: 413  LKDGIMHLNGRDVLFNKATGE 433


>ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutrema salsugineum]
            gi|557095570|gb|ESQ36152.1| hypothetical protein
            EUTSA_v10007947mg [Eutrema salsugineum]
          Length = 375

 Score =  259 bits (661), Expect = 4e-66
 Identities = 167/374 (44%), Positives = 197/374 (52%), Gaps = 46/374 (12%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDV+NKVR+EF+ +G   E VL++LQ +WE KMM+ GV+SGPIERSS  K   G
Sbjct: 10   VYIHVIEDVVNKVREEFINNGGPGESVLNELQGIWEMKMMQAGVLSGPIERSSAQKPTPG 69

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHS-IYHLPT-PSD 589
            G      HDLNV                               GTA++S +Y++PT  SD
Sbjct: 70   GPL---THDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPTGSSD 126

Query: 590  YSTPHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQP 769
            Y TP    G      GRPSPYMQPPSPW N R   +DVNVAYV+GR+E +RG S   NQ 
Sbjct: 127  YPTPGTENGSNPDAKGRPSPYMQPPSPWTNPR---LDVNVAYVDGRDEPERGNS---NQQ 180

Query: 770  TTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDAT---------------------- 883
             TQD FV  +GKRKR+D + Q    G +PQQDGA DA                       
Sbjct: 181  FTQDLFVPSNGKRKRDDSSAQYQNGGSIPQQDGASDAMPKANLEGDAFCITFVGNRKVLR 240

Query: 884  -------------------YDVFQS--ELYPYQGVASEDYNTVNTPAGHELQAGTPAVAA 1000
                               YD   S   +Y YQG  SED+N   TPA +E+QA TP VAA
Sbjct: 241  DFICSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG-PSEDFNEGRTPAPNEIQASTP-VAA 298

Query: 1001 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKCTLKDGIMH 1180
                                          NTQHLVLAQF+KV+RTKS+WKC LKDGIMH
Sbjct: 299  QNDIIEDDEELLNEDDDDDELDDLESGEDMNTQHLVLAQFEKVTRTKSRWKCNLKDGIMH 358

Query: 1181 INGKDILFTKATGE 1222
            IN KDILF KATGE
Sbjct: 359  INDKDILFNKATGE 372


>ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutrema salsugineum]
            gi|312282103|dbj|BAJ33917.1| unnamed protein product
            [Thellungiella halophila] gi|557095572|gb|ESQ36154.1|
            hypothetical protein EUTSA_v10007946mg [Eutrema
            salsugineum]
          Length = 375

 Score =  258 bits (660), Expect = 5e-66
 Identities = 167/374 (44%), Positives = 196/374 (52%), Gaps = 46/374 (12%)
 Frame = +2

Query: 239  VYINVIEDVINKVRDEFLQSGVE-EGVLSQLQALWEHKMMECGVISGPIERSSLNKQVAG 415
            VYI+VIEDV+NKVR+EF+ +G   E VL++LQ +WE KMM+ GV+SGPIERSS  K   G
Sbjct: 10   VYIHVIEDVVNKVREEFINNGGPGESVLNELQGIWEMKMMQAGVLSGPIERSSAQKPTPG 69

Query: 416  GSAITPVHDLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAEHS-IYHLPT-PSD 589
            G      HDLNV                               GTA++S +Y++PT  SD
Sbjct: 70   GPL---THDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPTGSSD 126

Query: 590  YSTPHDSGGVTEVKPGRPSPYMQPPSPWMNQRPLGVDVNVAYVEGREEADRGASHQPNQP 769
            Y TP    G      GRPSPYMQPPSPW N R   +DVNVAYV+GR+E +RG S   NQ 
Sbjct: 127  YPTPGTENGSNPDAKGRPSPYMQPPSPWTNPR---LDVNVAYVDGRDEPERGNS---NQQ 180

Query: 770  TTQDFFVVPSGKRKREDFAPQIPGSGYMPQQDGAGDAT---------------------- 883
             TQD FV  +GKRKR+D + Q    G +PQQDGA DA                       
Sbjct: 181  FTQDLFVPSNGKRKRDDSSAQYQNGGSIPQQDGASDAMPKANIEGDTLCITLVGNRKFPR 240

Query: 884  -------------------YDVFQS--ELYPYQGVASEDYNTVNTPAGHELQAGTPAVAA 1000
                               YD   S   +Y YQG  SED+N   TPA +E+QA TP VAA
Sbjct: 241  DFICSSSKIPQVDGPMPDPYDEILSTPNIYSYQG-PSEDFNDGRTPAPNEIQASTP-VAA 298

Query: 1001 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVSRTKSKWKCTLKDGIMH 1180
                                          NTQHLVLAQFDKV+RTKS+WKC LKDGIMH
Sbjct: 299  QNDIIEDDEELLNEDDDDDELDDLESGEDMNTQHLVLAQFDKVTRTKSRWKCNLKDGIMH 358

Query: 1181 INGKDILFTKATGE 1222
            IN KDILF KA GE
Sbjct: 359  INDKDILFNKAAGE 372