BLASTX nr result
ID: Cocculus23_contig00009521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00009521
(1338 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 120 3e-45
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera] 120 3e-45
gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis] 124 1e-42
ref|XP_007018692.1| RNA-binding family protein, putative [Theobr... 116 9e-42
ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chlorop... 114 4e-40
gb|ACU23303.1| unknown [Glycine max] 114 4e-40
ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 114 4e-40
gb|AFK43359.1| unknown [Lotus japonicus] 109 1e-38
ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citr... 109 4e-38
ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 108 7e-38
ref|XP_004501684.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 106 3e-37
dbj|BAD43393.1| putative protein [Arabidopsis thaliana] 105 3e-36
ref|NP_192643.2| RNA recognition motif-containing protein [Arabi... 105 3e-36
ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 103 3e-36
gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlise... 100 7e-36
ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arab... 107 8e-36
ref|XP_006397214.1| hypothetical protein EUTSA_v10028847mg [Eutr... 109 1e-35
ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Caps... 105 2e-35
ref|XP_007136284.1| hypothetical protein PHAVU_009G033600g [Phas... 99 5e-35
ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 100 9e-35
>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product
[Vitis vinifera]
Length = 294
Score = 120 bits (301), Expect(2) = 3e-45
Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQ-PTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKV 603
G +KV++A QKKK S+ V +++F+ANL ++ R+KDL+EFF S N NVV+A+V
Sbjct: 156 GRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEV 215
Query: 604 IHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAE 783
I N RRS+GYGFVSF SKEEA A+S+ QG++ MGRP+R+ SRR + E+K E
Sbjct: 216 IFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTE 275
Query: 784 DTSTEVNGDGGLSDKAVEI 840
D + +N + S + +I
Sbjct: 276 DVANPLNSNSEQSGEGDDI 294
Score = 90.1 bits (222), Expect(2) = 3e-45
Identities = 46/62 (74%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = +2
Query: 251 TAV-VGTPEIESEREI-RTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRG 424
TAV V TP+ + E E RTRLIAQNIPWTCT++DI++LFEK+GTVL+VELSM+NKTRNRG
Sbjct: 71 TAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRG 130
Query: 425 LA 430
LA
Sbjct: 131 LA 132
>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 120 bits (301), Expect(2) = 3e-45
Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQ-PTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKV 603
G +KV++A QKKK S+ V +++F+ANL ++ R+KDL+EFF S N NVV+A+V
Sbjct: 156 GRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEV 215
Query: 604 IHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAE 783
I N RRS+GYGFVSF SKEEA A+S+ QG++ MGRP+R+ SRR + E+K E
Sbjct: 216 IFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTE 275
Query: 784 DTSTEVNGDGGLSDKAVEI 840
D + +N + S + +I
Sbjct: 276 DVANPLNSNSEQSGEGDDI 294
Score = 90.1 bits (222), Expect(2) = 3e-45
Identities = 46/62 (74%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = +2
Query: 251 TAV-VGTPEIESEREI-RTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRG 424
TAV V TP+ + E E RTRLIAQNIPWTCT++DI++LFEK+GTVL+VELSM+NKTRNRG
Sbjct: 71 TAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRG 130
Query: 425 LA 430
LA
Sbjct: 131 LA 132
>gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis]
Length = 605
Score = 124 bits (310), Expect(2) = 1e-42
Identities = 67/130 (51%), Positives = 92/130 (70%), Gaps = 4/130 (3%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSN----QPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVA 594
G +K+D+AR +KKK + +P VT ++FVANLS++ R+KDL+EFF S +VV+
Sbjct: 473 GRVIKIDYARLRKKKVTTPMQPKPEVTF---NLFVANLSFEARAKDLREFFNSEGHSVVS 529
Query: 595 AKVIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDV 774
A+VI N RRS GYGFV+F SK+EA+AA+S VQGKI MGRPIR+ SR+ + + +
Sbjct: 530 AEVIFHENPRRSLGYGFVAFKSKKEAEAALSAVQGKIFMGRPIRVARSRQFVKQPTGESA 589
Query: 775 MAEDTSTEVN 804
EDTSTE+N
Sbjct: 590 KTEDTSTELN 599
Score = 78.2 bits (191), Expect(2) = 1e-42
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +2
Query: 278 ESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
E+E ++ RL AQN+PW CT EDI+ LFEK+GTV +VELSM+NKTRNRGLA
Sbjct: 399 ETEEVLKNRLYAQNVPWNCTPEDIRALFEKYGTVEDVELSMFNKTRNRGLA 449
>ref|XP_007018692.1| RNA-binding family protein, putative [Theobroma cacao]
gi|508724020|gb|EOY15917.1| RNA-binding family protein,
putative [Theobroma cacao]
Length = 290
Score = 116 bits (291), Expect(2) = 9e-42
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSN-QPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKV 603
G +++++A+ +KK+ + + VP ++FVANLS++ R+K LKEFF S +NVV+A+V
Sbjct: 153 GRTLRLNYAKPKKKRPAPPEKPKPVPAFNLFVANLSYEARAKHLKEFFSSEGANVVSAEV 212
Query: 604 IHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAE 783
I N R+S+GYGFVSF SK+EA AA+S QGK+ MGRPIR+ SR+ + +S D +
Sbjct: 213 IFHENPRKSSGYGFVSFKSKKEADAAMSAFQGKMFMGRPIRVARSRQFVKVQSDDSSQPD 272
Query: 784 DTSTEVNGD 810
D S E+N D
Sbjct: 273 DKSNELNFD 281
Score = 82.4 bits (202), Expect(2) = 9e-42
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +2
Query: 260 VGTPEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
V E E +TRLIAQN+PWTCT+EDI++LFEK+GTV++VELSM+NK RNRGLA
Sbjct: 73 VNEQEQHEEEFSKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVELSMHNKARNRGLA 129
>ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 345
Score = 114 bits (285), Expect(2) = 4e-40
Identities = 60/138 (43%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVT-VPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKV 603
G +KV++AR +K+K + P V ++FVANLS++ SKDLKEFF VV+A+V
Sbjct: 185 GRVIKVNYARPKKEKTAPPPVKPKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEV 244
Query: 604 IHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAE 783
++ N RR +GYGFVSF SK+EA+AA++ QGK+ MGRPIR+ RR + +E
Sbjct: 245 VYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRVDRGRRFVQQPGDGSAKSE 304
Query: 784 DTSTEVNGDGGLSDKAVE 837
DT +E++ +G + + E
Sbjct: 305 DTPSELSVNGAEAPQPAE 322
Score = 79.3 bits (194), Expect(2) = 4e-40
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +2
Query: 269 PEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
P + E RTRL+AQN+PWT T EDI+ LFEKHG VL VELSMY K RNRGLA
Sbjct: 108 PLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNRGLA 161
>gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 114 bits (285), Expect(2) = 4e-40
Identities = 60/138 (43%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVT-VPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKV 603
G +KV++AR +K+K + P V ++FVANLS++ SKDLKEFF VV+A+V
Sbjct: 155 GRVIKVNYARPKKEKTAPPPVKPKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEV 214
Query: 604 IHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAE 783
++ N RR +GYGFVSF SK+EA+AA++ QGK+ MGRPIR+ RR + +E
Sbjct: 215 VYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRVDRGRRFVQQPGDGSAKSE 274
Query: 784 DTSTEVNGDGGLSDKAVE 837
DT +E++ +G + + E
Sbjct: 275 DTPSELSVNGAEAPQPAE 292
Score = 79.3 bits (194), Expect(2) = 4e-40
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +2
Query: 269 PEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
P + E RTRL+AQN+PWT T EDI+ LFEKHG VL VELSMY K RNRGLA
Sbjct: 78 PLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNRGLA 131
>ref|XP_003522779.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Glycine max] gi|571450000|ref|XP_006578310.1|
PREDICTED: 29 kDa ribonucleoprotein A,
chloroplastic-like isoform X2 [Glycine max]
Length = 297
Score = 114 bits (284), Expect(2) = 4e-40
Identities = 58/137 (42%), Positives = 88/137 (64%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKVI 606
G +KV++AR +K+K V ++FVANLS++ +KDLKEFF S VV+A+V+
Sbjct: 138 GRVIKVNYARPKKEKTPPPVKPKVVTFNLFVANLSYEASAKDLKEFFDSGTGKVVSAEVV 197
Query: 607 HESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAED 786
+ N RR +GYGFVS+ SK+EA+AA++ QGKI MGRPIR+ RR + +ED
Sbjct: 198 YRDNPRRPSGYGFVSYKSKKEAEAALAEFQGKIFMGRPIRVDRGRRFVQQPGDGSAKSED 257
Query: 787 TSTEVNGDGGLSDKAVE 837
T ++++ +G + + E
Sbjct: 258 TPSDLSVNGAEAQQPAE 274
Score = 79.7 bits (195), Expect(2) = 4e-40
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +2
Query: 269 PEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
P + E RTRL+AQN+PWT T EDI++LFEKHG VL VELSMY K RNRGLA
Sbjct: 61 PVVAEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKKNRNRGLA 114
>gb|AFK43359.1| unknown [Lotus japonicus]
Length = 305
Score = 109 bits (273), Expect(2) = 1e-38
Identities = 64/139 (46%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVTVPRHDV----FVANLSWKVRSKDLKEFFGSANSNVVA 594
G +K+++AR +KKK P V R V FVANLS++ SKDL+EFF S +S VV+
Sbjct: 169 GRVLKLNYARPKKKK---APPPVVQRKPVTFNLFVANLSYEATSKDLREFFDSGSSQVVS 225
Query: 595 AKVIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDV 774
A+V+ + R+STGYGFVSF SK+EA AA+S Q K MGR +R+ S+R + +
Sbjct: 226 AEVVFHEDPRKSTGYGFVSFKSKKEANAALSEFQEKTFMGRSLRVAPSKRFVQPLEESSA 285
Query: 775 MAEDTSTEVNGDGGLSDKA 831
EDTSTE++ +G D A
Sbjct: 286 KPEDTSTELSVNGAGVDNA 304
Score = 79.0 bits (193), Expect(2) = 1e-38
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2
Query: 266 TPEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
T E +E TRL+AQN+PWT T ED+++LFE++GTVL VELSMYNKTR+RGLA
Sbjct: 91 TEEATTEEFSTTRLVAQNVPWTSTPEDVRSLFERYGTVLEVELSMYNKTRSRGLA 145
>ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536032|gb|ESR47150.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 363
Score = 109 bits (272), Expect(2) = 4e-38
Identities = 62/137 (45%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVTVP--RHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G +KV++A+ KKKN P P ++F+ANLS++ R+KDL+EFF S +VV+A+
Sbjct: 225 GRTLKVNYAKI-KKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISEGWDVVSAE 283
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
VI N RRS GYGFVSF SK+ A+AAIS QGK+ MGRP+R+ SR+ ++K+ + +
Sbjct: 284 VIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGKLFMGRPLRVAPSRQFARLQTKEGLHS 343
Query: 781 EDTSTEVNGDGGLSDKA 831
++TS ++N + +D A
Sbjct: 344 DETSDDLNINAEEADTA 360
Score = 77.4 bits (189), Expect(2) = 4e-38
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +2
Query: 254 AVVGTPEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
A V T + E E +TRL+AQN+PWT T EDI+ LFE+HGTVL+VELSM++K RNRGLA
Sbjct: 144 AAVNTEQREEEYS-KTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLA 201
>ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 306
Score = 108 bits (271), Expect(2) = 7e-38
Identities = 61/137 (44%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVT--VPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G +KV++A+ KKKN P P ++F+ANLS++ R+KDL+EFF S +VV+A+
Sbjct: 168 GRTLKVNYAKV-KKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAE 226
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
VI N RRS GYGFVSF SK+ A+ AIS QGK+ MGRP+R+ SR+ ++K+ + +
Sbjct: 227 VIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKLFMGRPLRVAPSRQFARLQTKEGLHS 286
Query: 781 EDTSTEVNGDGGLSDKA 831
++TS ++N + +D A
Sbjct: 287 DETSDDLNINAEEADTA 303
Score = 77.0 bits (188), Expect(2) = 7e-38
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +2
Query: 251 TAVVGTPEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
+A E E +TRL+AQN+PWT T EDI+ LFE+HGTVL++ELSM++K RNRGLA
Sbjct: 85 SAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLA 144
>ref|XP_004501684.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 287
Score = 106 bits (264), Expect(2) = 3e-37
Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Frame = +1
Query: 463 KKKNSNQPTVTVP-RHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKVIHESNDRRSTGY 639
KK+ + P P ++FVANLS++ RSKDL+EFF S + VV+A+VI N RR +GY
Sbjct: 163 KKEKTPPPVKQNPITFNLFVANLSYEARSKDLREFFDSGSGRVVSAEVIFNENPRRPSGY 222
Query: 640 GFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAEDTSTEVNGDGGL 819
GFVSF SK+EA A+S +GK MGRPIR+ S+R + + V EDTS+E++ +
Sbjct: 223 GFVSFKSKKEATEALSAFEGKNFMGRPIRVKPSKRFVQPAEESAVSEEDTSSELSVNEAE 282
Query: 820 SDKA 831
DKA
Sbjct: 283 PDKA 286
Score = 77.8 bits (190), Expect(2) = 3e-37
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +2
Query: 278 ESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
++E RTRL+AQN+PWT T+EDI++LFE+HG VL+VELS YNK RNRGLA
Sbjct: 78 DTEELSRTRLLAQNVPWTSTAEDIRSLFEQHGKVLDVELSRYNKNRNRGLA 128
>dbj|BAD43393.1| putative protein [Arabidopsis thaliana]
Length = 304
Score = 105 bits (263), Expect(2) = 3e-36
Identities = 55/126 (43%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKN--SNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G +KVD+A+T+KKK + VP ++FVANL+++ R+K LKEFF + NVV+ +
Sbjct: 161 GRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTE 220
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
VI N RRS+GYGFVSF +K++A+AA+ QGK +GRPIRL S++ + ++K+ +
Sbjct: 221 VIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQP 280
Query: 781 EDTSTE 798
+ E
Sbjct: 281 PEEEAE 286
Score = 74.7 bits (182), Expect(2) = 3e-36
Identities = 32/53 (60%), Positives = 44/53 (83%)
Frame = +2
Query: 269 PEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGL 427
PE+ E +TRLIAQN+PWT T EDI++LFEK+G+V+++E+SM+ K RNRGL
Sbjct: 84 PEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGL 136
>ref|NP_192643.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|38603886|gb|AAR24688.1| At4g09040 [Arabidopsis
thaliana] gi|51968384|dbj|BAD42884.1| putative protein
[Arabidopsis thaliana] gi|51969486|dbj|BAD43435.1|
putative protein [Arabidopsis thaliana]
gi|51969588|dbj|BAD43486.1| putative protein
[Arabidopsis thaliana] gi|51970774|dbj|BAD44079.1|
putative protein [Arabidopsis thaliana]
gi|62319325|dbj|BAD94588.1| hypothetical protein
[Arabidopsis thaliana] gi|332657315|gb|AEE82715.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 304
Score = 105 bits (263), Expect(2) = 3e-36
Identities = 55/126 (43%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKN--SNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G +KVD+A+T+KKK + VP ++FVANL+++ R+K LKEFF + NVV+ +
Sbjct: 161 GRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTE 220
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
VI N RRS+GYGFVSF +K++A+AA+ QGK +GRPIRL S++ + ++K+ +
Sbjct: 221 VIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQP 280
Query: 781 EDTSTE 798
+ E
Sbjct: 281 PEEEAE 286
Score = 74.7 bits (182), Expect(2) = 3e-36
Identities = 32/53 (60%), Positives = 44/53 (83%)
Frame = +2
Query: 269 PEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGL 427
PE+ E +TRLIAQN+PWT T EDI++LFEK+G+V+++E+SM+ K RNRGL
Sbjct: 84 PEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGL 136
>ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449497014|ref|XP_004160289.1| PREDICTED: 31
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 103 bits (258), Expect(2) = 3e-36
Identities = 53/124 (42%), Positives = 84/124 (67%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKVI 606
G +++++A+ +K+K S ++FVANL + R+KDLKEFF S + NVV+A++I
Sbjct: 166 GRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFDSGSGNVVSAQII 225
Query: 607 HESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAED 786
N RRS+GYGFV+F +K++A+AAIS QGK MGR +R+ S++ + S++ +ED
Sbjct: 226 FNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFVKLPSEEKPQSED 285
Query: 787 TSTE 798
ST+
Sbjct: 286 ASTD 289
Score = 76.6 bits (187), Expect(2) = 3e-36
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +2
Query: 278 ESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
++E +TRL+AQN+PW T EDI++LFEK+GTVL+VELSMYNK RNRGLA
Sbjct: 92 DTEEFSQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLA 142
>gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlisea aurea]
Length = 263
Score = 100 bits (249), Expect(2) = 7e-36
Identities = 55/122 (45%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSNQPTVT--VPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G +K+++A+ +K+KN +T +P H++FVANL ++ R KDLK+FF N V+A+
Sbjct: 147 GRVLKLNWAKPKKEKNKTGVVITQPLPVHNLFVANLPFEARPKDLKDFF-----NAVSAE 201
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
VI+ N RR GYGFVSF +KEEA AA+++ Q K MGRPIR+ S+R L +K +
Sbjct: 202 VIYNENPRRPAGYGFVSFYTKEEADAALTSFQAKEFMGRPIRVARSKRFLREGTKAAIQL 261
Query: 781 ED 786
E+
Sbjct: 262 EN 263
Score = 79.0 bits (193), Expect(2) = 7e-36
Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +2
Query: 248 ITAVVGTPEIESEREI-RTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRG 424
+ +V G E EI RTRL+ QN+PWTCT++DI+ LFE +G+V+ +E SMYNKTRNRG
Sbjct: 62 VDSVTGEENAAEEDEISRTRLLVQNVPWTCTADDIQPLFENYGSVIEIEFSMYNKTRNRG 121
Query: 425 LA 430
LA
Sbjct: 122 LA 123
>ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arabidopsis lyrata subsp.
lyrata] gi|297318197|gb|EFH48619.1| hypothetical protein
ARALYDRAFT_489706 [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 107 bits (267), Expect(2) = 8e-36
Identities = 56/126 (44%), Positives = 85/126 (67%), Gaps = 2/126 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKN--SNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G +KVD+A+T+KKK + VP ++FVANL+++ R+K LKEFF + NVV+ +
Sbjct: 159 GRRLKVDYAKTKKKKTYAPREKPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTE 218
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
VI + N RRS+GYGFVSF +K++A+AA+ QGK MGRPIRL S++ + ++K+ +
Sbjct: 219 VIFQENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFMGRPIRLAKSKQFVKLQAKEGLQP 278
Query: 781 EDTSTE 798
+ E
Sbjct: 279 PEEEEE 284
Score = 71.6 bits (174), Expect(2) = 8e-36
Identities = 31/52 (59%), Positives = 42/52 (80%)
Frame = +2
Query: 272 EIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGL 427
E+ E +TRLIAQN+PWT T EDI++LFEK+G V+++E+SM+ K RNRGL
Sbjct: 83 EVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVIDIEMSMHKKERNRGL 134
>ref|XP_006397214.1| hypothetical protein EUTSA_v10028847mg [Eutrema salsugineum]
gi|557098231|gb|ESQ38667.1| hypothetical protein
EUTSA_v10028847mg [Eutrema salsugineum]
Length = 298
Score = 109 bits (273), Expect(2) = 1e-35
Identities = 60/123 (48%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKN---SNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAA 597
G +KVD+A+T+KKK +PT VP ++FVANLS++ R+K LKEFF + NVV+
Sbjct: 156 GRRLKVDYAKTKKKKTYAPREKPTA-VPTFNLFVANLSFEARAKHLKEFFDADTGNVVST 214
Query: 598 KVIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVM 777
+VI N RRS+GYGFVSF +K+ A+AA+ QGK MGRPIRL S++ + ++K+ +
Sbjct: 215 EVIFHENPRRSSGYGFVSFKTKKMAEAALVDFQGKDFMGRPIRLARSKQFVKLQAKEGLQ 274
Query: 778 AED 786
A D
Sbjct: 275 ATD 277
Score = 68.9 bits (167), Expect(2) = 1e-35
Identities = 33/50 (66%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +2
Query: 281 SEREI-RTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGL 427
+E EI +TRLIAQN+PWT T EDI++LFEK G V++VE+SM+ K RNRGL
Sbjct: 82 TEEEISKTRLIAQNVPWTSTPEDIRSLFEKFGIVVDVEMSMHKKERNRGL 131
>ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Capsella rubella]
gi|565460694|ref|XP_006288346.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557051|gb|EOA21243.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557052|gb|EOA21244.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
Length = 297
Score = 105 bits (263), Expect(2) = 2e-35
Identities = 56/126 (44%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKN--SNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G +KVD+A+ +KKK + VP ++FVANL+++ R+K LKEFF + NVV+ +
Sbjct: 151 GRRLKVDYAKAKKKKTYAPREKPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTE 210
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
VI N RRS+GYGFVSF +K++A+AAI QGK MGRPIRL S++ + ++K+ +
Sbjct: 211 VIFHENPRRSSGYGFVSFKTKKQAEAAIIEFQGKDFMGRPIRLARSKQFVKLQAKEGLQP 270
Query: 781 EDTSTE 798
+ E
Sbjct: 271 PEEEVE 276
Score = 71.6 bits (174), Expect(2) = 2e-35
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +2
Query: 266 TPEIESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGL 427
+PE+E E +TRLIAQN+PW T EDI++LFEK+G V+++E+SM+ K RNRGL
Sbjct: 74 SPEVEDEIS-KTRLIAQNVPWAATPEDIRSLFEKYGNVVDIEMSMHKKERNRGL 126
>ref|XP_007136284.1| hypothetical protein PHAVU_009G033600g [Phaseolus vulgaris]
gi|593268215|ref|XP_007136285.1| hypothetical protein
PHAVU_009G033600g [Phaseolus vulgaris]
gi|561009371|gb|ESW08278.1| hypothetical protein
PHAVU_009G033600g [Phaseolus vulgaris]
gi|561009372|gb|ESW08279.1| hypothetical protein
PHAVU_009G033600g [Phaseolus vulgaris]
Length = 306
Score = 98.6 bits (244), Expect(2) = 5e-35
Identities = 57/139 (41%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +1
Query: 427 GVXVKVDFARTQKKKNSN--QPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAK 600
G ++V++AR +KKK +P+ V ++FVANLS++ +S DLKEFF S VV A+
Sbjct: 147 GRVMRVNYARPKKKKTPPPVKPSSGVT-FNLFVANLSYEAKSTDLKEFFDSGTGKVVRAE 205
Query: 601 VIHESNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMA 780
V+ + R+ +GYGFVSF SK+EA+AA+S QGK MGR IR+ RR + + +
Sbjct: 206 VVFHESPRKPSGYGFVSFKSKKEAEAALSEFQGKDFMGRSIRVDRGRRFVQKPGDRNPKS 265
Query: 781 EDTSTEVNGDGGLSDKAVE 837
DT +E++ +G + + E
Sbjct: 266 VDTPSELSVNGAEAQQPAE 284
Score = 77.8 bits (190), Expect(2) = 5e-35
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +2
Query: 275 IESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
+ E RTRL+AQN+PWT T EDI++LFEKHG VL+VELSMY K RNRGLA
Sbjct: 72 VTEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLDVELSMYKKDRNRGLA 123
>ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Oryza
brachyantha]
Length = 352
Score = 99.8 bits (247), Expect(2) = 9e-35
Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
Frame = +1
Query: 436 VKVDFARTQKKKNSNQPTVTVPRHDVFVANLSWKVRSKDLKEFFGSANSNVVAAKVI-HE 612
+KVDFAR++KK+ P+ +P+H VFV NL+W+VRS+ L+E F S N + + +VI H
Sbjct: 226 IKVDFARSRKKRPV-VPSAPMPKHSVFVGNLTWRVRSRHLRELFAS-NPGLQSVEVIFHT 283
Query: 613 SNDRRSTGYGFVSFASKEEAKAAISTVQGKILMGRPIRLGLSRRSLDGESKDDVMAEDTS 792
++ RRS GYGFVSF+SKE A+AAIST G LMGR I + + + ED
Sbjct: 284 TSPRRSAGYGFVSFSSKEAAEAAISTFNGTKLMGRSINVMFKDDNAKKNKSAEPKEEDLK 343
Query: 793 TEVN 804
+E++
Sbjct: 344 SELS 347
Score = 75.9 bits (185), Expect(2) = 9e-35
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +2
Query: 275 IESEREIRTRLIAQNIPWTCTSEDIKNLFEKHGTVLNVELSMYNKTRNRGLA 430
+E RTRLIAQNIPW CT++D++ LF KHG+V++VELSMYN +RNRGLA
Sbjct: 148 VEEPEGPRTRLIAQNIPWDCTADDMRALFGKHGSVVDVELSMYNSSRNRGLA 199