BLASTX nr result
ID: Cocculus23_contig00009349
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00009349
(203 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
emb|CBI15839.3| unnamed protein product [Vitis vinifera] 100 2e-19
ref|XP_007155315.1| hypothetical protein PHAVU_003G190600g [Phas... 96 4e-18
gb|EXB45758.1| hypothetical protein L484_003842 [Morus notabilis] 93 3e-17
ref|XP_006466530.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17
ref|XP_006426011.1| hypothetical protein CICLE_v10025167mg [Citr... 92 6e-17
ref|XP_002438055.1| hypothetical protein SORBIDRAFT_10g007350 [S... 92 6e-17
ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat... 91 1e-16
gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis] 91 2e-16
ref|XP_006658490.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_007211285.1| hypothetical protein PRUPE_ppa002699mg [Prun... 91 2e-16
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 91 2e-16
ref|XP_006395522.1| hypothetical protein EUTSA_v10003772mg [Eutr... 91 2e-16
gb|EMT21135.1| Pentatricopeptide repeat-containing protein [Aegi... 91 2e-16
ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
ref|XP_006656772.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
>ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 536
Score = 107 bits (268), Expect = 1e-21
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPG 22
GMHGYGK+A+DAF M +KPDGVTFVGLL +CSHSGL GR YFSEM+ YG+EPG
Sbjct: 244 GMHGYGKEAVDAFIAMEREGIKPDGVTFVGLLCSCSHSGLVSVGRSYFSEMKIVYGIEPG 303
Query: 21 IEHYGCM 1
IEHYGCM
Sbjct: 304 IEHYGCM 310
>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 100 bits (250), Expect = 2e-19
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPG 22
GM+G G++AI AF M + +KPDGVTFVG+LS CSHSGL G+RYFSEM G YG+EPG
Sbjct: 282 GMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPG 341
Query: 21 IEHYGCM 1
+EHYGCM
Sbjct: 342 VEHYGCM 348
>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 100 bits (250), Expect = 2e-19
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPG 22
GM+G G++AI AF M + +KPDGVTFVG+LS CSHSGL G+RYFSEM G YG+EPG
Sbjct: 210 GMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPG 269
Query: 21 IEHYGCM 1
+EHYGCM
Sbjct: 270 VEHYGCM 276
>ref|XP_007155315.1| hypothetical protein PHAVU_003G190600g [Phaseolus vulgaris]
gi|561028669|gb|ESW27309.1| hypothetical protein
PHAVU_003G190600g [Phaseolus vulgaris]
Length = 626
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHGYG++AI F EM E+ V+PDG+TF+ LL ACSHSGL EG +FS+M+ YG+EP I
Sbjct: 331 MHGYGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGYVFFSKMKNLYGIEPAI 390
Query: 18 EHYGCM 1
EHYGCM
Sbjct: 391 EHYGCM 396
>gb|EXB45758.1| hypothetical protein L484_003842 [Morus notabilis]
Length = 633
Score = 93.2 bits (230), Expect = 3e-17
Identities = 39/67 (58%), Positives = 54/67 (80%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPG 22
G+HGYGK+A+D FA M E ++KPD VTFVG+LSAC+H+GL +GR +F++M+ YG+ P
Sbjct: 425 GIHGYGKEALDMFARMCETQLKPDEVTFVGVLSACNHAGLLRQGRDFFTQMKTNYGITPT 484
Query: 21 IEHYGCM 1
IEHY C+
Sbjct: 485 IEHYTCV 491
>ref|XP_006466530.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Citrus sinensis]
Length = 622
Score = 92.4 bits (228), Expect = 6e-17
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHG+GKDA+ F EM ++KP +TF+GLLSAC+H+GL EGRR+F+ M+ Y +EP +
Sbjct: 328 MHGFGKDALQLFNEMCRIRLKPSDITFIGLLSACAHAGLVNEGRRFFNTMKDEYAIEPKV 387
Query: 18 EHYGCM 1
EHYGCM
Sbjct: 388 EHYGCM 393
>ref|XP_006426011.1| hypothetical protein CICLE_v10025167mg [Citrus clementina]
gi|557528001|gb|ESR39251.1| hypothetical protein
CICLE_v10025167mg [Citrus clementina]
Length = 622
Score = 92.4 bits (228), Expect = 6e-17
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHG+GKDA+ F EM ++KP +TF+GLLSAC+H+GL EGRR+F+ M+ Y +EP +
Sbjct: 328 MHGFGKDALQLFNEMCRIRLKPSDITFIGLLSACAHAGLVNEGRRFFNTMKDEYAIEPKV 387
Query: 18 EHYGCM 1
EHYGCM
Sbjct: 388 EHYGCM 393
>ref|XP_002438055.1| hypothetical protein SORBIDRAFT_10g007350 [Sorghum bicolor]
gi|241916278|gb|EER89422.1| hypothetical protein
SORBIDRAFT_10g007350 [Sorghum bicolor]
Length = 587
Score = 92.4 bits (228), Expect = 6e-17
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVE-------NKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEG 43
GM+G+G+DAI AF +MVE N VKPDGVTFV LLSACSHSGL E R++FS+M
Sbjct: 292 GMNGHGEDAIAAFHDMVEGRGRLNGNSVKPDGVTFVALLSACSHSGLVLEARKFFSQMLP 351
Query: 42 AYGVEPGIEHYGCM 1
YG+ P EHYGCM
Sbjct: 352 VYGLPPQPEHYGCM 365
>ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Fragaria vesca subsp. vesca]
Length = 643
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHGYGK+AI F +M + V+PDG+TF+ +L ACSH+GL EG YFS+M YG++P I
Sbjct: 348 MHGYGKEAIQVFRKMEASGVRPDGITFISVLYACSHAGLVNEGCEYFSKMREMYGIDPAI 407
Query: 18 EHYGCM 1
EHYGCM
Sbjct: 408 EHYGCM 413
>ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 1428
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHG G++AI F EM E+ V+PDG+TF+ LL ACSHSGL EG FS+M+ YG+EP I
Sbjct: 1133 MHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAI 1192
Query: 18 EHYGCM 1
EHYGCM
Sbjct: 1193 EHYGCM 1198
>gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis]
Length = 616
Score = 90.9 bits (224), Expect = 2e-16
Identities = 38/66 (57%), Positives = 53/66 (80%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHG +DA++ F++M++NK+KPDG+TFV +L+AC+H GL +G R FS M+ YGVEP I
Sbjct: 400 MHGRAEDAVELFSKMLKNKLKPDGITFVNILNACAHGGLVDKGLRIFSSMKKLYGVEPEI 459
Query: 18 EHYGCM 1
EHYGC+
Sbjct: 460 EHYGCV 465
>ref|XP_006658490.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like, partial [Oryza brachyantha]
Length = 576
Score = 90.9 bits (224), Expect = 2e-16
Identities = 35/67 (52%), Positives = 55/67 (82%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPG 22
GMHG+G++A++ FAEM + ++P+ +TF+ +L+ACSH+GL EGR ++S M+ +G+EPG
Sbjct: 281 GMHGHGQEALEVFAEMKRSGLRPNYITFISVLAACSHAGLLDEGRHWYSAMKQEFGIEPG 340
Query: 21 IEHYGCM 1
+EHYGCM
Sbjct: 341 VEHYGCM 347
>ref|XP_007211285.1| hypothetical protein PRUPE_ppa002699mg [Prunus persica]
gi|462407020|gb|EMJ12484.1| hypothetical protein
PRUPE_ppa002699mg [Prunus persica]
Length = 643
Score = 90.9 bits (224), Expect = 2e-16
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHGYGK+A F +M + ++PDG+TF+ +L ACSH+GL EG YFS+M YG+EP I
Sbjct: 348 MHGYGKEATQVFHDMEASGIRPDGITFISVLYACSHAGLIDEGCEYFSKMRYLYGIEPAI 407
Query: 18 EHYGCM 1
EHYGCM
Sbjct: 408 EHYGCM 413
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHG+GKDAI F++M E+KVKP+ VTF +L ACSH GL EGR +F++ME YGV PG+
Sbjct: 448 MHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGV 507
Query: 18 EHYGCM 1
+HY CM
Sbjct: 508 KHYACM 513
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
MHG+GKDAI F++M E+KVKP+ VTF +L ACSH GL EGR +F++ME YGV PG+
Sbjct: 327 MHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGV 386
Query: 18 EHYGCM 1
+HY CM
Sbjct: 387 KHYACM 392
>ref|XP_006395522.1| hypothetical protein EUTSA_v10003772mg [Eutrema salsugineum]
gi|557092161|gb|ESQ32808.1| hypothetical protein
EUTSA_v10003772mg [Eutrema salsugineum]
Length = 664
Score = 90.5 bits (223), Expect = 2e-16
Identities = 37/67 (55%), Positives = 54/67 (80%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPG 22
GMHG+ A++ F M+++ V+P+ +TFV +L+ACSH+GL EG R+F+EM+G +GVEPG
Sbjct: 369 GMHGHADKALELFPVMIDSGVRPNHITFVSVLAACSHAGLHVEGWRWFNEMKGRFGVEPG 428
Query: 21 IEHYGCM 1
+EHYGCM
Sbjct: 429 LEHYGCM 435
>gb|EMT21135.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 469
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 5/72 (6%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMVE-----NKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAY 37
G +G G+DA+ AF +MVE N+V+PD VTFV LLSACSHSGL EGR F+EM A+
Sbjct: 291 GRNGRGEDAVRAFRDMVETSNKNNEVRPDSVTFVALLSACSHSGLVREGRELFAEMLPAH 350
Query: 36 GVEPGIEHYGCM 1
GV PG EHYGCM
Sbjct: 351 GVAPGAEHYGCM 362
>ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = -3
Query: 195 HGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGIE 16
HG+G A+DAF +MV+ +PDG+TFVG+LSACSH+GL EGR+YF + YG+ P +E
Sbjct: 633 HGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTME 692
Query: 15 HYGCM 1
HY CM
Sbjct: 693 HYACM 697
>ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 90.1 bits (222), Expect = 3e-16
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = -3
Query: 198 MHGYGKDAIDAFAEMVENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAYGVEPGI 19
+HG G++A++AF +MVE+ +KPD + F+G+L ACSH GL EGRR FS M YG+EP +
Sbjct: 274 VHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPAL 333
Query: 18 EHYGCM 1
EHYGCM
Sbjct: 334 EHYGCM 339
>ref|XP_006656772.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Oryza brachyantha]
Length = 472
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 5/72 (6%)
Frame = -3
Query: 201 GMHGYGKDAIDAFAEMV-----ENKVKPDGVTFVGLLSACSHSGLFWEGRRYFSEMEGAY 37
GM+G G+DA+ AF +MV +V+PDGVTFV LLSACSHSGL EGRR F+EM +
Sbjct: 259 GMNGRGEDAVRAFHDMVGRSQTRREVRPDGVTFVALLSACSHSGLVAEGRRLFAEMVPVH 318
Query: 36 GVEPGIEHYGCM 1
GVEP EHYGCM
Sbjct: 319 GVEPREEHYGCM 330