BLASTX nr result
ID: Cocculus23_contig00009196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00009196
(434 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006434781.1| hypothetical protein CICLE_v10002178mg [Citr... 163 3e-38
ref|XP_006434778.1| hypothetical protein CICLE_v10002178mg [Citr... 163 3e-38
ref|XP_006434777.1| hypothetical protein CICLE_v10002178mg [Citr... 163 3e-38
ref|XP_006473329.1| PREDICTED: chlorophyll a-b binding protein P... 160 2e-37
ref|XP_006465467.1| PREDICTED: chlorophyll a-b binding protein 7... 160 2e-37
ref|XP_006374944.1| chlorophyll A-B binding family protein [Popu... 156 3e-36
ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4... 155 4e-36
gb|EXC19762.1| Chlorophyll a-b binding protein P4 [Morus notabilis] 155 7e-36
gb|EYU25420.1| hypothetical protein MIMGU_mgv1a011943mg [Mimulus... 154 9e-36
ref|XP_006828393.1| hypothetical protein AMTR_s00060p00031820 [A... 154 2e-35
ref|XP_006343439.1| PREDICTED: chlorophyll a-b binding protein P... 153 3e-35
ref|XP_002510221.1| chlorophyll A/B binding protein, putative [R... 153 3e-35
ref|XP_007017246.1| Photosystem I light harvesting complex gene ... 152 4e-35
ref|XP_007017245.1| Light-harvesting complex I protein Lhca5 iso... 152 4e-35
ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4... 152 5e-35
ref|XP_004242952.1| PREDICTED: chlorophyll a-b binding protein 7... 152 6e-35
ref|XP_004242951.1| PREDICTED: chlorophyll a-b binding protein 7... 152 6e-35
gb|ABN10530.1| Lhca5 protein [Gentiana lutea] 152 6e-35
ref|XP_002891322.1| light-harvesting complex protein [Arabidopsi... 147 1e-33
ref|NP_175137.1| photosystem I light harvesting complex protein ... 146 3e-33
>ref|XP_006434781.1| hypothetical protein CICLE_v10002178mg [Citrus clementina]
gi|557536903|gb|ESR48021.1| hypothetical protein
CICLE_v10002178mg [Citrus clementina]
Length = 226
Score = 163 bits (412), Expect = 3e-38
Identities = 94/145 (64%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 PCYSSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAH-RQTWXXXXXXXXXX 178
P SSS N +S F +P++S TT R A VVRA R TW
Sbjct: 13 PSSSSSFICNDVNKSSIGITSAF-LPAKSGTTRR--YLATVVRAQQRPTWLPGLDPPPYL 69
Query: 179 XXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVW 358
AGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGIL TDLLRVT I LPVW
Sbjct: 70 DGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVW 129
Query: 359 YEAGAMKFEFASTRTLFIVQLLLMG 433
YEAGA++F+FASTRTLFIVQLLLMG
Sbjct: 130 YEAGAVEFKFASTRTLFIVQLLLMG 154
>ref|XP_006434778.1| hypothetical protein CICLE_v10002178mg [Citrus clementina]
gi|567884441|ref|XP_006434779.1| hypothetical protein
CICLE_v10002178mg [Citrus clementina]
gi|567884443|ref|XP_006434780.1| hypothetical protein
CICLE_v10002178mg [Citrus clementina]
gi|557536900|gb|ESR48018.1| hypothetical protein
CICLE_v10002178mg [Citrus clementina]
gi|557536901|gb|ESR48019.1| hypothetical protein
CICLE_v10002178mg [Citrus clementina]
gi|557536902|gb|ESR48020.1| hypothetical protein
CICLE_v10002178mg [Citrus clementina]
Length = 265
Score = 163 bits (412), Expect = 3e-38
Identities = 94/145 (64%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 PCYSSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAH-RQTWXXXXXXXXXX 178
P SSS N +S F +P++S TT R A VVRA R TW
Sbjct: 13 PSSSSSFICNDVNKSSIGITSAF-LPAKSGTTRR--YLATVVRAQQRPTWLPGLDPPPYL 69
Query: 179 XXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVW 358
AGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGIL TDLLRVT I LPVW
Sbjct: 70 DGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVW 129
Query: 359 YEAGAMKFEFASTRTLFIVQLLLMG 433
YEAGA++F+FASTRTLFIVQLLLMG
Sbjct: 130 YEAGAVEFKFASTRTLFIVQLLLMG 154
>ref|XP_006434777.1| hypothetical protein CICLE_v10002178mg [Citrus clementina]
gi|557536899|gb|ESR48017.1| hypothetical protein
CICLE_v10002178mg [Citrus clementina]
Length = 189
Score = 163 bits (412), Expect = 3e-38
Identities = 94/145 (64%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 PCYSSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAH-RQTWXXXXXXXXXX 178
P SSS N +S F +P++S TT R A VVRA R TW
Sbjct: 13 PSSSSSFICNDVNKSSIGITSAF-LPAKSGTTRR--YLATVVRAQQRPTWLPGLDPPPYL 69
Query: 179 XXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVW 358
AGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGIL TDLLRVT I LPVW
Sbjct: 70 DGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVW 129
Query: 359 YEAGAMKFEFASTRTLFIVQLLLMG 433
YEAGA++F+FASTRTLFIVQLLLMG
Sbjct: 130 YEAGAVEFKFASTRTLFIVQLLLMG 154
>ref|XP_006473329.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568838667|ref|XP_006473330.1| PREDICTED: chlorophyll
a-b binding protein P4, chloroplastic-like isoform X2
[Citrus sinensis] gi|568838669|ref|XP_006473331.1|
PREDICTED: chlorophyll a-b binding protein P4,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 265
Score = 160 bits (405), Expect = 2e-37
Identities = 91/142 (64%), Positives = 99/142 (69%), Gaps = 1/142 (0%)
Frame = +2
Query: 11 SSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAH-RQTWXXXXXXXXXXXXX 187
SSS ++ SS +P++ TT R A VVRA R TW
Sbjct: 15 SSSSFISKDVNKSSIGITSAFLPAKPGTTRR--YLATVVRAQQRPTWLPGVDPPPYLDGT 72
Query: 188 XAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVWYEA 367
AGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGIL TDLLRVT I LPVWYEA
Sbjct: 73 LAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVWYEA 132
Query: 368 GAMKFEFASTRTLFIVQLLLMG 433
GA++F+FASTRTLFIVQLLLMG
Sbjct: 133 GAVEFKFASTRTLFIVQLLLMG 154
>ref|XP_006465467.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Citrus sinensis]
Length = 158
Score = 160 bits (405), Expect = 2e-37
Identities = 91/142 (64%), Positives = 99/142 (69%), Gaps = 1/142 (0%)
Frame = +2
Query: 11 SSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAH-RQTWXXXXXXXXXXXXX 187
SSS ++ SS +P++ TT R A VVRA R TW
Sbjct: 15 SSSSFISKDVNKSSIGITSAFLPAKPGTTRR--YLATVVRAQQRPTWLPGVDPPPYLDGT 72
Query: 188 XAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVWYEA 367
AGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGIL TDLLRVT I LPVWYEA
Sbjct: 73 LAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILFTDLLRVTGIRELPVWYEA 132
Query: 368 GAMKFEFASTRTLFIVQLLLMG 433
GA++F+FASTRTLFIVQLLLMG
Sbjct: 133 GAVEFKFASTRTLFIVQLLLMG 154
>ref|XP_006374944.1| chlorophyll A-B binding family protein [Populus trichocarpa]
gi|550323257|gb|ERP52741.1| chlorophyll A-B binding
family protein [Populus trichocarpa]
Length = 266
Score = 156 bits (394), Expect = 3e-36
Identities = 89/146 (60%), Positives = 99/146 (67%), Gaps = 2/146 (1%)
Frame = +2
Query: 2 PCYSSS-GSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAH-RQTWXXXXXXXXX 175
PC SSS SL+ SS +P++ S+ +VV A R TW
Sbjct: 13 PCLSSSLCSLSKNINKSSFGAAETFLPAKPSSIR---CTPVVVHAQQRPTWLPGLDPPPY 69
Query: 176 XXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPV 355
AGDFGFDPLGLGEDP+SL+WYVQAELVHARFAMAGVAGIL TDLLRVT I LPV
Sbjct: 70 LDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHARFAMAGVAGILFTDLLRVTGIRKLPV 129
Query: 356 WYEAGAMKFEFASTRTLFIVQLLLMG 433
WYEAGA+KFEFASTRTL +VQLLLMG
Sbjct: 130 WYEAGAVKFEFASTRTLIVVQLLLMG 155
>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
product [Vitis vinifera]
Length = 264
Score = 155 bits (393), Expect = 4e-36
Identities = 80/105 (76%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Frame = +2
Query: 122 VVRAH-RQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGV 298
VV+A R TW AGDFGFDPLGLGEDPE+LRWYVQAELVHARFAMAGV
Sbjct: 50 VVQAQQRPTWLPGLDPPPYLNGTLAGDFGFDPLGLGEDPENLRWYVQAELVHARFAMAGV 109
Query: 299 AGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
AGIL+TDLLRVT ISNLPVWYEAGA+KFEFAST LFIVQL+LMG
Sbjct: 110 AGILVTDLLRVTGISNLPVWYEAGAVKFEFASTEALFIVQLILMG 154
>gb|EXC19762.1| Chlorophyll a-b binding protein P4 [Morus notabilis]
Length = 264
Score = 155 bits (391), Expect = 7e-36
Identities = 85/144 (59%), Positives = 97/144 (67%), Gaps = 1/144 (0%)
Frame = +2
Query: 5 CYSSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAH-RQTWXXXXXXXXXXX 181
C S N + P+ K P+ + + T R +V RA R TW
Sbjct: 14 CSLSLVCKNVSKPSFGVAKLPWPAQAGKARTRT---RVMVTRAQLRPTWLPGLDPPPYLD 70
Query: 182 XXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVWY 361
AGD+GFDPLGLGEDPESLRWYVQAELVHARFAM GVAGILLTDLLRV IS++PVWY
Sbjct: 71 GSLAGDYGFDPLGLGEDPESLRWYVQAELVHARFAMLGVAGILLTDLLRVAGISSIPVWY 130
Query: 362 EAGAMKFEFASTRTLFIVQLLLMG 433
EAGA+K+EFA+T TLFIVQLLLMG
Sbjct: 131 EAGAIKYEFANTGTLFIVQLLLMG 154
>gb|EYU25420.1| hypothetical protein MIMGU_mgv1a011943mg [Mimulus guttatus]
Length = 266
Score = 154 bits (390), Expect = 9e-36
Identities = 79/112 (70%), Positives = 85/112 (75%)
Frame = +2
Query: 98 NRPALRALVVRAHRQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHA 277
++ A R V R TW AGDFGFDPLGLGEDPESL+WYVQAELVHA
Sbjct: 43 SKKASRVTVRAQDRPTWLPGLDPPSYLNGTLAGDFGFDPLGLGEDPESLKWYVQAELVHA 102
Query: 278 RFAMAGVAGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
RFAMAGVAGIL TDLLRVT IS+LPVWYEAGA KF+FA+T TLFIVQLLLMG
Sbjct: 103 RFAMAGVAGILFTDLLRVTGISDLPVWYEAGATKFDFANTTTLFIVQLLLMG 154
>ref|XP_006828393.1| hypothetical protein AMTR_s00060p00031820 [Amborella trichopoda]
gi|548833141|gb|ERM95809.1| hypothetical protein
AMTR_s00060p00031820 [Amborella trichopoda]
Length = 260
Score = 154 bits (388), Expect = 2e-35
Identities = 76/117 (64%), Positives = 86/117 (73%)
Frame = +2
Query: 83 RSSTTNRPALRALVVRAHRQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQA 262
RS R ++ A R TW AGDFGFDPLGLGEDP+SL+WYVQA
Sbjct: 34 RSKRQRHHHRRCVITSAQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPKSLKWYVQA 93
Query: 263 ELVHARFAMAGVAGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
ELVHARFAMA VAGILLTDLLR T +S++P WYEAGA+KFEFASTR+LFIVQL+LMG
Sbjct: 94 ELVHARFAMAAVAGILLTDLLRTTGVSSIPAWYEAGAIKFEFASTRSLFIVQLILMG 150
>ref|XP_006343439.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Solanum tuberosum]
Length = 266
Score = 153 bits (386), Expect = 3e-35
Identities = 79/105 (75%), Positives = 83/105 (79%), Gaps = 1/105 (0%)
Frame = +2
Query: 122 VVRAH-RQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGV 298
+V+AH R TW AGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGV
Sbjct: 51 LVQAHQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGV 110
Query: 299 AGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
AGILLTDLLRVT I +LPVWYEAGA KF FAST TL I+QLLLMG
Sbjct: 111 AGILLTDLLRVTGIRDLPVWYEAGATKFNFASTTTLLIIQLLLMG 155
>ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223550922|gb|EEF52408.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 269
Score = 153 bits (386), Expect = 3e-35
Identities = 77/115 (66%), Positives = 86/115 (74%)
Frame = +2
Query: 89 STTNRPALRALVVRAHRQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAEL 268
ST++R RA+V R TW AGD+GFDPLGLGEDPESL+WYVQAEL
Sbjct: 44 STSSRCYTRAVVRAQQRPTWLPGLDSPPYLDGTLAGDYGFDPLGLGEDPESLKWYVQAEL 103
Query: 269 VHARFAMAGVAGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
VHARFAM G+AGIL TDLLRVT I LPVWYEAGA+K+EFASTRTL +VQLL MG
Sbjct: 104 VHARFAMLGIAGILFTDLLRVTGIRKLPVWYEAGAVKYEFASTRTLLVVQLLWMG 158
>ref|XP_007017246.1| Photosystem I light harvesting complex gene 5 isoform 2, partial
[Theobroma cacao] gi|508722574|gb|EOY14471.1|
Photosystem I light harvesting complex gene 5 isoform 2,
partial [Theobroma cacao]
Length = 247
Score = 152 bits (385), Expect = 4e-35
Identities = 85/144 (59%), Positives = 95/144 (65%)
Frame = +2
Query: 2 PCYSSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAHRQTWXXXXXXXXXXX 181
PC SSS ++ K A S++ R + V R TW
Sbjct: 13 PCSSSSSIFHNKI---YKPSLGAASTLWSTSAPRRYGQIAVQAQQRPTWLPGLDPPPYLD 69
Query: 182 XXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVWY 361
AGD+GFDPLGLGEDPESL+WYVQAELVHARFAMAGVAGIL TDLLRVT ISNLPVWY
Sbjct: 70 GTLAGDYGFDPLGLGEDPESLKWYVQAELVHARFAMAGVAGILFTDLLRVTGISNLPVWY 129
Query: 362 EAGAMKFEFASTRTLFIVQLLLMG 433
EAGA+KF+FAST TL +VQLLLMG
Sbjct: 130 EAGAVKFDFASTGTLIVVQLLLMG 153
>ref|XP_007017245.1| Light-harvesting complex I protein Lhca5 isoform 1 [Theobroma
cacao] gi|508722573|gb|EOY14470.1| Light-harvesting
complex I protein Lhca5 isoform 1 [Theobroma cacao]
Length = 264
Score = 152 bits (385), Expect = 4e-35
Identities = 85/144 (59%), Positives = 95/144 (65%)
Frame = +2
Query: 2 PCYSSSGSLNSTFPASSKCKCPFAVPSRSSTTNRPALRALVVRAHRQTWXXXXXXXXXXX 181
PC SSS ++ K A S++ R + V R TW
Sbjct: 13 PCSSSSSIFHNKI---YKPSLGAASTLWSTSAPRRYGQIAVQAQQRPTWLPGLDPPPYLD 69
Query: 182 XXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVWY 361
AGD+GFDPLGLGEDPESL+WYVQAELVHARFAMAGVAGIL TDLLRVT ISNLPVWY
Sbjct: 70 GTLAGDYGFDPLGLGEDPESLKWYVQAELVHARFAMAGVAGILFTDLLRVTGISNLPVWY 129
Query: 362 EAGAMKFEFASTRTLFIVQLLLMG 433
EAGA+KF+FAST TL +VQLLLMG
Sbjct: 130 EAGAVKFDFASTGTLIVVQLLLMG 153
>ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus] gi|449522610|ref|XP_004168319.1|
PREDICTED: chlorophyll a-b binding protein 4,
chloroplastic-like [Cucumis sativus]
Length = 259
Score = 152 bits (384), Expect = 5e-35
Identities = 79/133 (59%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Frame = +2
Query: 47 SSKCKCPFAVPSRSSTTNRPALRALVVR----AHRQTWXXXXXXXXXXXXXXAGDFGFDP 214
SS P PS+ P+ R L++ HRQTW AGDFGFDP
Sbjct: 16 SSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDP 75
Query: 215 LGLGEDPESLRWYVQAELVHARFAMAGVAGILLTDLLRVTKISNLPVWYEAGAMKFEFAS 394
LGLGEDP+SL+WYVQAELVH RFAM GV+G+LLTDLLRVT IS LPVWY AGA+++ FA+
Sbjct: 76 LGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFAN 135
Query: 395 TRTLFIVQLLLMG 433
RTLFIVQLLLMG
Sbjct: 136 KRTLFIVQLLLMG 148
>ref|XP_004242952.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Solanum lycopersicum]
Length = 256
Score = 152 bits (383), Expect = 6e-35
Identities = 77/105 (73%), Positives = 83/105 (79%), Gaps = 1/105 (0%)
Frame = +2
Query: 122 VVRAH-RQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGV 298
+ +AH R TW AGDFGFDPLGLGEDPESL+WYVQAELVHARFAMAGV
Sbjct: 47 LAQAHQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPESLKWYVQAELVHARFAMAGV 106
Query: 299 AGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
AGILLTDLLRVT+I +LPVWYEAGA KF FAST TL I+QLLLMG
Sbjct: 107 AGILLTDLLRVTRIRDLPVWYEAGATKFNFASTTTLLIIQLLLMG 151
>ref|XP_004242951.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Solanum lycopersicum]
Length = 262
Score = 152 bits (383), Expect = 6e-35
Identities = 77/105 (73%), Positives = 83/105 (79%), Gaps = 1/105 (0%)
Frame = +2
Query: 122 VVRAH-RQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGV 298
+ +AH R TW AGDFGFDPLGLGEDPESL+WYVQAELVHARFAMAGV
Sbjct: 47 LAQAHQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPESLKWYVQAELVHARFAMAGV 106
Query: 299 AGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
AGILLTDLLRVT+I +LPVWYEAGA KF FAST TL I+QLLLMG
Sbjct: 107 AGILLTDLLRVTRIRDLPVWYEAGATKFNFASTTTLLIIQLLLMG 151
>gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
Length = 272
Score = 152 bits (383), Expect = 6e-35
Identities = 77/105 (73%), Positives = 83/105 (79%), Gaps = 1/105 (0%)
Frame = +2
Query: 122 VVRAH-RQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGV 298
VVRA R TW AGDFGFDPLGLGEDPESL+WYVQAELVH+RFAMAGV
Sbjct: 58 VVRAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMAGV 117
Query: 299 AGILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
AGIL TDLLR T +SNLPVWYEAGA KF+FA+T TLFIVQ+LLMG
Sbjct: 118 AGILFTDLLRTTGLSNLPVWYEAGATKFQFANTTTLFIVQMLLMG 162
>ref|XP_002891322.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
gi|297337164|gb|EFH67581.1| light-harvesting complex
protein [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 147 bits (372), Expect = 1e-33
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +2
Query: 125 VRAHRQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAG 304
V R TW AGD+GFDPLGLGEDPESLRWYVQAELVH+RFAM GVAG
Sbjct: 42 VAVERATWLPGLDPPPYLDGKLAGDYGFDPLGLGEDPESLRWYVQAELVHSRFAMLGVAG 101
Query: 305 ILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
IL TDLLR T I NLPVWYEAGA+KF+FAST+TL +VQ LLMG
Sbjct: 102 ILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMG 144
>ref|NP_175137.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana] gi|30693978|ref|NP_849778.1| photosystem I
light harvesting complex protein 5 [Arabidopsis
thaliana] gi|12321000|gb|AAG50618.1|AC083835_3
light-harvesting complex protein [Arabidopsis thaliana]
gi|17063199|gb|AAL32974.1| At1g45474/F2G19.4
[Arabidopsis thaliana] gi|19699116|gb|AAL90924.1|
At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|62320735|dbj|BAD95402.1| light-harvesting complex
protein [Arabidopsis thaliana]
gi|332193996|gb|AEE32117.1| photosystem I light
harvesting complex protein 5 [Arabidopsis thaliana]
gi|332193997|gb|AEE32118.1| photosystem I light
harvesting complex protein 5 [Arabidopsis thaliana]
Length = 256
Score = 146 bits (369), Expect = 3e-33
Identities = 71/103 (68%), Positives = 78/103 (75%)
Frame = +2
Query: 125 VRAHRQTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMAGVAG 304
V R TW AGD+GFDPLGLGEDPESL+WYVQAELVH+RFAM GVAG
Sbjct: 42 VAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAG 101
Query: 305 ILLTDLLRVTKISNLPVWYEAGAMKFEFASTRTLFIVQLLLMG 433
IL TDLLR T I NLPVWYEAGA+KF+FAST+TL +VQ LLMG
Sbjct: 102 ILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMG 144