BLASTX nr result
ID: Cocculus23_contig00008935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00008935
(1031 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264... 301 4e-79
ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citr... 278 3e-72
ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I sub... 276 1e-71
ref|XP_007017752.1| DNA-directed RNA polymerases, putative isofo... 276 1e-71
gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RP... 275 3e-71
ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I sub... 275 3e-71
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub... 267 5e-69
ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutr... 262 2e-67
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin... 262 2e-67
ref|XP_007139687.1| hypothetical protein PHAVU_008G050600g [Phas... 258 2e-66
ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arab... 258 3e-66
ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, part... 257 6e-66
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub... 257 6e-66
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm... 256 1e-65
ref|XP_002306915.2| hypothetical protein POPTR_0005s25810g [Popu... 253 7e-65
ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thalia... 253 7e-65
gb|AAK93576.1| unknown protein [Arabidopsis thaliana] 252 2e-64
ref|XP_004239824.1| PREDICTED: uncharacterized protein LOC101248... 246 8e-63
ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Popu... 246 1e-62
ref|XP_006365851.1| PREDICTED: uncharacterized protein LOC102591... 245 2e-62
>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
gi|302142630|emb|CBI19833.3| unnamed protein product
[Vitis vinifera]
Length = 233
Score = 301 bits (770), Expect = 4e-79
Identities = 151/228 (66%), Positives = 187/228 (82%), Gaps = 5/228 (2%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGL+VSDANL+VY+HPSKA +V QAILRELS+LLFKFNE FDG+VLA+DV + K AKI
Sbjct: 1 MEGLRVSDANLIVYVHPSKANRVSQAILRELSSLLFKFNEIFDGVVLAYDVDIPSKDAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
LPGIHPYFGVRLKAKLLLFSPKP+ L+EGKVVKL +ESIH++VLGFS+A IT+E+IR EF
Sbjct: 61 LPGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFSSAIITDEEIRGEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+YKIKHGE VF S SHKRHVIKVGTMIRFLVK DEE+LHISGSL P +TG I WL++ +
Sbjct: 121 KYKIKHGEAVFVSRSHKRHVIKVGTMIRFLVKSLDEEILHISGSLNPPHTGSILWLDKKL 180
Query: 691 DEGSQSERTTKKRRREAYGQDLEHFE--EG---ALQNTPSLSKNSKRR 819
++ S S R+TKKRR ++++ + +G +L N+ + K+ KR+
Sbjct: 181 EDASPSSRSTKKRRENGESREMQEHDTVDGGVFSLDNSHHIKKSKKRK 228
>ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citrus clementina]
gi|557537269|gb|ESR48387.1| hypothetical protein
CICLE_v10002352mg [Citrus clementina]
Length = 233
Score = 278 bits (710), Expect = 3e-72
Identities = 145/228 (63%), Positives = 177/228 (77%), Gaps = 5/228 (2%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLKVSDA++ VYLHPSK+ KV QAILRELS+LLFKFNE F+G++LA+DV + K KI
Sbjct: 1 MEGLKVSDADMEVYLHPSKSKKVSQAILRELSSLLFKFNEIFEGVLLAYDVNILDKNGKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L GIHPYFGV+LKAKLLLFSPKP+ LVEGKVV+L + SIHVIVLGFS+A IT++DIREEF
Sbjct: 61 LFGIHPYFGVKLKAKLLLFSPKPNMLVEGKVVRLTQASIHVIVLGFSSAIITDQDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
Y K+GEEVFAS SHKRHVIKVGTMIRFLVK FDEE+LHISGSL PA+TG I+WL++
Sbjct: 121 NYTTKYGEEVFASRSHKRHVIKVGTMIRFLVKSFDEEILHISGSLKPAHTGSIRWLDKKS 180
Query: 691 DEGSQSERTTKKRRREAYGQDLEHFEE-----GALQNTPSLSKNSKRR 819
++ +T KRR +++ E ++ N + K+ KRR
Sbjct: 181 KNVCLADSSTTKRREVEGKSEMQDNETVGAAVSSVSNDHQIKKSKKRR 228
>ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Citrus sinensis]
Length = 233
Score = 276 bits (706), Expect = 1e-71
Identities = 144/228 (63%), Positives = 176/228 (77%), Gaps = 5/228 (2%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLKVSDA++ VYLHPSK+ KV QAILRELS+LLFKFNE F+G++LA+DV + K KI
Sbjct: 1 MEGLKVSDADMEVYLHPSKSKKVSQAILRELSSLLFKFNEIFEGVLLAYDVNILDKNGKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L GIHPYFGV+LKAKLLLFSPKP+ LVEGKVV+L + SIHVIVLGFS+A IT++DIREEF
Sbjct: 61 LCGIHPYFGVKLKAKLLLFSPKPNMLVEGKVVRLTQASIHVIVLGFSSAIITDQDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
Y K+GEEVFAS SHK HVIKVGTMIRFLVK FDEE+LHISGSL+PA TG I+WL++
Sbjct: 121 NYTTKYGEEVFASRSHKWHVIKVGTMIRFLVKSFDEEILHISGSLIPARTGSIRWLDKKS 180
Query: 691 DEGSQSERTTKKRRREAYGQDLEHFEE-----GALQNTPSLSKNSKRR 819
++ +T KRR +++ E ++ N + K+ KRR
Sbjct: 181 KNVCLADSSTTKRREVEGKSEMQDNETVGAAVSSVSNDHQIKKSKKRR 228
>ref|XP_007017752.1| DNA-directed RNA polymerases, putative isoform 1 [Theobroma cacao]
gi|508723080|gb|EOY14977.1| DNA-directed RNA
polymerases, putative isoform 1 [Theobroma cacao]
Length = 243
Score = 276 bits (705), Expect = 1e-71
Identities = 141/228 (61%), Positives = 177/228 (77%)
Frame = +1
Query: 145 LMMEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTA 324
L M+GL V+DA+LVVY+HPSK+ KV QAILRELS+LLFKFNE FDG++LA+DV ++ K A
Sbjct: 15 LKMKGLSVADADLVVYVHPSKSRKVSQAILRELSSLLFKFNEAFDGVLLAYDVNIQDKQA 74
Query: 325 KILPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIRE 504
KIL G+HPYFG+RLKA LLLFSPK D L+EGKVVKL +ESIHVI+LGFS+A IT ++IR
Sbjct: 75 KILSGVHPYFGLRLKANLLLFSPKSDMLLEGKVVKLSQESIHVIILGFSSAIITAQNIRG 134
Query: 505 EFRYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQ 684
EF+YK K EE+FAS SHKRHVIKVGTMIRFLVK FDEE+LHI GSL+PA+TG I WL+
Sbjct: 135 EFKYKTKDEEELFASRSHKRHVIKVGTMIRFLVKSFDEEILHIIGSLMPAHTGSICWLDW 194
Query: 685 HIDEGSQSERTTKKRRREAYGQDLEHFEEGALQNTPSLSKNSKRRRTD 828
+++E S+ +R+ K R + +D L + K+ K R T+
Sbjct: 195 NLEEISEFDRSATKSRGREWQEDKTFEGTTPLSYNNHIKKSKKHRITE 242
>gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RPA43 [Morus
notabilis]
Length = 234
Score = 275 bits (702), Expect = 3e-71
Identities = 138/217 (63%), Positives = 175/217 (80%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
ME LKVS+A +VVY+HPSK+ K+ A+LRELS+LLFKF+E FDG+VLA++ + K+AKI
Sbjct: 1 MECLKVSEAKMVVYVHPSKSTKIYDAVLRELSSLLFKFDENFDGVVLAYEFDILDKSAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L GIHPY GVR+KAKLLLFSPKPD L+EG+VVK+ + SIHVIVLGF++A ITEE+IR+EF
Sbjct: 61 LSGIHPYIGVRIKAKLLLFSPKPDMLLEGRVVKVTQGSIHVIVLGFASAVITEEEIRDEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
YKIKH EEVF+S HK H IKVGTMIRFLVK DEE+LHISGSL+PA+TGCI+WL +H+
Sbjct: 121 VYKIKHEEEVFSSKFHKHHTIKVGTMIRFLVKSLDEEILHISGSLIPAHTGCIRWLAKHL 180
Query: 691 DEGSQSERTTKKRRREAYGQDLEHFEEGALQNTPSLS 801
D+ + + R+ KKRR E+ EE LQ+ ++S
Sbjct: 181 DDDTITGRSKKKRR--------ENEEESILQDHGTVS 209
>ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Cicer
arietinum]
Length = 232
Score = 275 bits (702), Expect = 3e-71
Identities = 141/215 (65%), Positives = 174/215 (80%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLKVS ANLVVY+HPSK+ +V A+LRELS++LF +NE FDGIVLA+DV K A+I
Sbjct: 1 MEGLKVSKANLVVYIHPSKSRQVSNAVLRELSSMLFAYNEIFDGIVLAYDVNSFDKCARI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
LPGI+PYFGV+LK +LLFSPKPD L+EGKVVKL ESIHV+VLGF++A ITE+DIR+EF
Sbjct: 61 LPGIYPYFGVKLKVNMLLFSPKPDMLLEGKVVKLTHESIHVVVLGFASAVITEKDIRKEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
Y+ KHG++V+AS SHKRHVIKVGTMIRF VK FDEE+LHI GSL+P NTG I WL++++
Sbjct: 121 VYRTKHGQDVYASKSHKRHVIKVGTMIRFSVKSFDEEILHIYGSLVPDNTGSIHWLDKNL 180
Query: 691 DEGSQSERTTKKRRREAYGQDLEHFEEGALQNTPS 795
+ S S+R+TKKR E GQ L E+ A+ PS
Sbjct: 181 EVVSLSDRSTKKRENE--GQPLMS-EKDAIDGEPS 212
>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
[Cucumis sativus] gi|449476884|ref|XP_004154864.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like [Cucumis sativus]
Length = 231
Score = 267 bits (683), Expect = 5e-69
Identities = 129/196 (65%), Positives = 163/196 (83%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLKVSDAN+VVY+HPSK+ K+ QA+LREL A+L KF+EKF+G++LA++ + K AKI
Sbjct: 1 MEGLKVSDANMVVYVHPSKSKKISQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGV +KAKLLLFSPKP+ L+EGKVVKL +ESIHVIVLGF++A IT EDIR+EF
Sbjct: 61 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+++ KHGEE+F S +HK H+IKVGTMIR LVK FDEE+LHISGSL+P++TG I WLE++
Sbjct: 121 KHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180
Query: 691 DEGSQSERTTKKRRRE 738
EGS + K R E
Sbjct: 181 VEGSVTMSKRKMRENE 196
>ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutrema salsugineum]
gi|557086719|gb|ESQ27571.1| hypothetical protein
EUTSA_v10019169mg [Eutrema salsugineum]
Length = 196
Score = 262 bits (669), Expect = 2e-67
Identities = 125/194 (64%), Positives = 157/194 (80%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLK+SDA L+VY+HPSK V QAI RELSALLF+++E FDG++LA+D V K AKI
Sbjct: 1 MEGLKLSDAELMVYIHPSKCRNVFQAICRELSALLFQYDETFDGVLLAYDFTVESKQAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G++PYFGVR+ KLLLF PKP++LVEGK+VK+ ESIHV+VLGFSAA IT+ DIREEF
Sbjct: 61 LAGLNPYFGVRINTKLLLFDPKPNSLVEGKIVKISPESIHVVVLGFSAAVITDIDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+YK++ GE F S SHKRH +KVGTM+R V+ FDEEVLHI+GSL+PANTGC+KWLE+
Sbjct: 121 KYKMRDGEGCFVSRSHKRHALKVGTMLRLQVESFDEEVLHIAGSLMPANTGCVKWLEKQS 180
Query: 691 DEGSQSERTTKKRR 732
+E +R K+R+
Sbjct: 181 EEALHMDRDHKRRK 194
>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
gi|571541492|ref|XP_006601777.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X1 [Glycine
max] gi|571541496|ref|XP_006601778.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X2 [Glycine
max] gi|255631830|gb|ACU16282.1| unknown [Glycine max]
Length = 232
Score = 262 bits (669), Expect = 2e-67
Identities = 139/228 (60%), Positives = 174/228 (76%), Gaps = 4/228 (1%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLKVS ANL VY+HPSK+ +V QA+LR+LS+LLF F+E FDG+VLA+DV AKI
Sbjct: 1 MEGLKVSKANLTVYIHPSKSNQVSQAVLRQLSSLLFTFSEIFDGVVLAYDVNSFDTCAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGV+LK LLLFSPKP+ L+EGKVVK+ +ESIHV+VLGFS+A I+E+DIREEF
Sbjct: 61 LSGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIISEKDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
K K G+EV+ S SHKRHVIKVGTMIRFLVK FDEE+LH+ GSL+P +TG I WL++++
Sbjct: 121 VCKTKRGQEVYVSRSHKRHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKNL 180
Query: 691 DEGSQSERTTKKRR----REAYGQDLEHFEEGALQNTPSLSKNSKRRR 822
+ S S+R+ KKRR R QD E L N SK SK+++
Sbjct: 181 EVDSHSDRSEKKRRIVPERIMLEQDAVDGELSTL-NIGQKSKKSKKQK 227
>ref|XP_007139687.1| hypothetical protein PHAVU_008G050600g [Phaseolus vulgaris]
gi|543176404|gb|AGV54225.1| DNA-directed RNA polymerase
I subunit rpa43-like protein [Phaseolus vulgaris]
gi|561012820|gb|ESW11681.1| hypothetical protein
PHAVU_008G050600g [Phaseolus vulgaris]
Length = 232
Score = 258 bits (660), Expect = 2e-66
Identities = 137/225 (60%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
ME LKVS ANL VY+HPSK+ +V +A+LRELS+LLF F+E G+VLA+DV AKI
Sbjct: 1 MEWLKVSKANLTVYIHPSKSNQVSKAVLRELSSLLFTFSEIVGGVVLAYDVNSLDTCAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
LPG+HPY GV+LKA LLLF PKP+TL+EGKVVKL +ESIHV+VLGFSAA ITE+DIREEF
Sbjct: 61 LPGVHPYLGVKLKANLLLFCPKPNTLLEGKVVKLTQESIHVVVLGFSAAIITEKDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
K K G+EV+AS S+KRHVIKVGTMIRFLVK FDEE+LHI GSL+P +TG I WL++++
Sbjct: 121 VCKTKKGQEVYASRSNKRHVIKVGTMIRFLVKSFDEEILHICGSLIPDHTGSIYWLDKNL 180
Query: 691 DEGSQSERTTKKRRREAYGQDLEH-FEEGALQNTPSLSKNSKRRR 822
+ S ++R+ KK+R E LE +G L N + K + +R
Sbjct: 181 EVVSHADRSEKKKRIEPERIMLEQGAVDGELSNLDIVQKRTNAKR 225
>ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arabidopsis lyrata subsp.
lyrata] gi|297334877|gb|EFH65295.1| hypothetical protein
ARALYDRAFT_316494 [Arabidopsis lyrata subsp. lyrata]
Length = 196
Score = 258 bits (659), Expect = 3e-66
Identities = 120/194 (61%), Positives = 156/194 (80%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLK+S+A L++Y+HPSK+ V QAI RELS+LLF++NE FDG++LA+D V+ K AKI
Sbjct: 1 MEGLKLSEAELMIYIHPSKSRNVFQAICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGVR+ +LLLF PKP + VEGK+VK+ ESIHVIVLGFSAA IT+ DIREEF
Sbjct: 61 LAGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+Y+++ GE F S SHKRH +K+GTM+R V+ FDEEV+HI+GSLLP NTGC+KWLE
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLENKS 180
Query: 691 DEGSQSERTTKKRR 732
+E ++R K+R+
Sbjct: 181 EEALHTDRDHKRRK 194
>ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, partial [Capsella rubella]
gi|482571392|gb|EOA35580.1| hypothetical protein
CARUB_v10020789mg, partial [Capsella rubella]
Length = 270
Score = 257 bits (656), Expect = 6e-66
Identities = 119/194 (61%), Positives = 158/194 (81%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLK+S+A L+VY+HPSK+ V QAI RELS+LLF++ E FDG++LA+D V+ K AKI
Sbjct: 75 MEGLKLSEAELMVYIHPSKSRNVFQAICRELSSLLFQYTETFDGVLLAYDATVKSKQAKI 134
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGVR+ +LLLF PKP +LVEG++VK+ ESIHV+VLGFSAA +T+ DIREEF
Sbjct: 135 LSGLHPYFGVRVNTRLLLFDPKPKSLVEGEIVKISPESIHVVVLGFSAAVVTDLDIREEF 194
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
++++K GE F S SHKRH +K+GT++R V+ FDEEVLHI+GSLLP NTGC+KWLE+H
Sbjct: 195 KFRVKDGEGCFVSRSHKRHALKLGTILRLQVQSFDEEVLHIAGSLLPENTGCVKWLEKHS 254
Query: 691 DEGSQSERTTKKRR 732
+E ++R K+R+
Sbjct: 255 EEVLPTDRDRKRRK 268
>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Glycine max] gi|571479213|ref|XP_006587794.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like isoform X2 [Glycine max]
gi|571479215|ref|XP_006587795.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa43-like isoform X3 [Glycine
max]
Length = 232
Score = 257 bits (656), Expect = 6e-66
Identities = 135/230 (58%), Positives = 169/230 (73%), Gaps = 4/230 (1%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLKVS ANL Y+HPSK +V Q ILR+LS+LLFKF+E F G+VLA+D+ AKI
Sbjct: 1 MEGLKVSKANLTAYIHPSKTNQVSQPILRQLSSLLFKFSEIFHGVVLAYDLNSLHTCAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
LPG+HPYFGV+LK LLLFSPKP+ L+EGKVVK+ +ESIHV+VLGFS+A ITE+DIREEF
Sbjct: 61 LPGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIITEKDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
K K G+EV+AS SHK+HVIKVGTMIRFLVK FDEE+LH+ GSL+P +TG I WL++++
Sbjct: 121 VCKTKRGQEVYASRSHKQHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKNL 180
Query: 691 DEGSQSERTTKKRR----REAYGQDLEHFEEGALQNTPSLSKNSKRRRTD 828
+ S R+ KKRR R QD E L K+ K++ +
Sbjct: 181 EADSHVYRSKKKRRIVPERIMLEQDAVDGELSTLDIVQKSKKSKKQKHQE 230
>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
gi|223551211|gb|EEF52697.1| conserved hypothetical
protein [Ricinus communis]
Length = 229
Score = 256 bits (654), Expect = 1e-65
Identities = 132/210 (62%), Positives = 161/210 (76%), Gaps = 2/210 (0%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGL +S+ANLVVY+HPS++ V QAILRELS+LLFKFNE FDG+VLA+ K A+I
Sbjct: 1 MEGLSISEANLVVYVHPSQSKNVSQAILRELSSLLFKFNENFDGVVLAYAFNAPDKQARI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGVRL+A +L+FSPKPD L+EGKVVK+ +ESIHVIVLGFS+A IT+EDIR+EF
Sbjct: 61 LCGVHPYFGVRLQATMLVFSPKPDMLLEGKVVKVTRESIHVIVLGFSSAIITDEDIRDEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
RYK KHGE ++ S HK+HVIKVGTMIRF+VK DEE LHISGSL+P +TG I WL
Sbjct: 121 RYKRKHGEALYVSRPHKQHVIKVGTMIRFVVKSLDEETLHISGSLVPTHTGSISWL---- 176
Query: 691 DEGSQSERTTK--KRRREAYGQDLEHFEEG 774
EG TT ++R ++E EEG
Sbjct: 177 -EGDMKNTTTDSGNKKRTQLDGEIEVQEEG 205
>ref|XP_002306915.2| hypothetical protein POPTR_0005s25810g [Populus trichocarpa]
gi|550339753|gb|EEE93911.2| hypothetical protein
POPTR_0005s25810g [Populus trichocarpa]
Length = 230
Score = 253 bits (647), Expect = 7e-65
Identities = 130/228 (57%), Positives = 169/228 (74%), Gaps = 2/228 (0%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGL SDANL+VY+HPS++ V +AILRELS+LLFK+++ FDG+VLA+ V + K A+I
Sbjct: 1 MEGLSKSDANLIVYVHPSQSKNVDKAILRELSSLLFKYSQAFDGVVLAYSVDPQDKCARI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGVRL+A LL+FSPKP+ L+EGKVVK+ +ESIH IVLGFS+A IT+E+IR E
Sbjct: 61 LSGVHPYFGVRLRANLLIFSPKPNMLLEGKVVKITRESIHCIVLGFSSAIITDENIRNEL 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQH- 687
+YK KHGE V+ S HKRHVIKVG +IRF VK DEE+LHISGSL+PANTG + WL+++
Sbjct: 121 KYKAKHGEGVYVSRYHKRHVIKVGAVIRFEVKSLDEEILHISGSLIPANTGSVHWLDKYF 180
Query: 688 IDEGSQSERTTK-KRRREAYGQDLEHFEEGALQNTPSLSKNSKRRRTD 828
+D S + TK + E Q E + N + K+ KRRR +
Sbjct: 181 VDAAIDSNKETKTEEEMEMQEQITVGGETLSFVNDHEIKKSKKRRRAE 228
>ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|42572115|ref|NP_974148.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|23297345|gb|AAN12946.1|
unknown protein [Arabidopsis thaliana]
gi|332197622|gb|AEE35743.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|332197623|gb|AEE35744.1|
DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 196
Score = 253 bits (647), Expect = 7e-65
Identities = 117/194 (60%), Positives = 156/194 (80%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLK+S+A L++++HPS++ V Q I RELS+LLF++NE FDG++LA+D V+ K AKI
Sbjct: 1 MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGVR+ +LLLF PKP + VEGK+VK+ ESIHVIVLGFSAA IT+ DIREEF
Sbjct: 61 LTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+Y+++ GE F S SHKRH +K+GTM+R V+ FDEEV+HI+GSLLP NTGC+KWLE+
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKS 180
Query: 691 DEGSQSERTTKKRR 732
+E ++R K+R+
Sbjct: 181 EEALPTDRDHKRRK 194
>gb|AAK93576.1| unknown protein [Arabidopsis thaliana]
Length = 196
Score = 252 bits (643), Expect = 2e-64
Identities = 116/194 (59%), Positives = 155/194 (79%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGLK+S+A L++++HPS++ V Q I RELS+LLF++NE FDG++LA+D V+ K AKI
Sbjct: 1 MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGVR+ +LLLF PKP + VEGK+ K+ ESIHVIVLGFSAA IT+ DIREEF
Sbjct: 61 LTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIAKISPESIHVIVLGFSAAVITDVDIREEF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+Y+++ GE F S SHKRH +K+GTM+R V+ FDEEV+HI+GSLLP NTGC+KWLE+
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKS 180
Query: 691 DEGSQSERTTKKRR 732
+E ++R K+R+
Sbjct: 181 EEALPTDRDHKRRK 194
>ref|XP_004239824.1| PREDICTED: uncharacterized protein LOC101248579 [Solanum
lycopersicum]
Length = 231
Score = 246 bits (629), Expect = 8e-63
Identities = 121/193 (62%), Positives = 154/193 (79%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
ME LK ANL+VYLHPS A V A+ RELS+LLFKFNE DG+VL ++ A+I
Sbjct: 1 MEALKECRANLLVYLHPSNAKNVETAVYRELSSLLFKFNEALDGVVLTYEPKFSSNLARI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
LPGIHPYFGV+L+AKLLLF+PKP+ L+EG+VVK+G++SIH++VLGFS+A I +EDIRE+F
Sbjct: 61 LPGIHPYFGVKLEAKLLLFNPKPEMLLEGEVVKVGQQSIHIVVLGFSSAVIADEDIREDF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+YKIKHG+EVF S S+K+H IKVGT +RF VK FDEE+LH+ GSL+P NTG I+WLE
Sbjct: 121 KYKIKHGKEVFVSRSNKKHRIKVGTTLRFSVKNFDEEILHMCGSLIPDNTGNIQWLETKA 180
Query: 691 DEGSQSERTTKKR 729
+E SQ+ T+KR
Sbjct: 181 EE-SQAYSITEKR 192
>ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Populus trichocarpa]
gi|550344135|gb|EEE81261.2| hypothetical protein
POPTR_0002s02620g [Populus trichocarpa]
Length = 232
Score = 246 bits (628), Expect = 1e-62
Identities = 124/230 (53%), Positives = 170/230 (73%), Gaps = 4/230 (1%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
MEGL S A+L+VY HPS++ V +AILRELS+LLFK+++ FDG+VLA+ V + K A+I
Sbjct: 1 MEGLSKSVADLIVYEHPSQSKDVDKAILRELSSLLFKYSQAFDGVVLAYSVEPQDKCARI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
L G+HPYFGVRL+A +L+FSPKP+ L+EGKVVKL +ESIH IVLGFS+A +T+E+IR E
Sbjct: 61 LSGVHPYFGVRLQANMLIFSPKPNMLLEGKVVKLTRESIHCIVLGFSSAIVTDENIRNEL 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQ-H 687
+YK KHGE V+ S HKRHVIKVG ++RF+VK DEE+LHISGSL+PANTG + WL++ +
Sbjct: 121 KYKSKHGEGVYVSRYHKRHVIKVGAVLRFVVKSLDEEILHISGSLIPANTGSVHWLDKYY 180
Query: 688 IDEGSQSERTTKKRRREAYGQDLEHFEEG---ALQNTPSLSKNSKRRRTD 828
+D G+ S + +++ E + G L N + ++ KRRR +
Sbjct: 181 VDAGTDSNKKARRQIEEEVEMQEQVIVGGETLPLVNDHEVKRSKKRRRAE 230
>ref|XP_006365851.1| PREDICTED: uncharacterized protein LOC102591771 [Solanum tuberosum]
Length = 231
Score = 245 bits (625), Expect = 2e-62
Identities = 122/193 (63%), Positives = 152/193 (78%)
Frame = +1
Query: 151 MEGLKVSDANLVVYLHPSKAAKVRQAILRELSALLFKFNEKFDGIVLAHDVIVRGKTAKI 330
ME LK ANLVV LHPS A V + RELS+LLFKFNE DG+VL ++ A+I
Sbjct: 1 MEALKECRANLVVNLHPSNAKNVETGVYRELSSLLFKFNEALDGVVLTYEPKFSSNLARI 60
Query: 331 LPGIHPYFGVRLKAKLLLFSPKPDTLVEGKVVKLGKESIHVIVLGFSAAAITEEDIREEF 510
LPGIHPYFGVRL+AKLLLF+PKP+ L+EG+VVK+G++SIH++VLGFS+A I +EDIRE+F
Sbjct: 61 LPGIHPYFGVRLEAKLLLFNPKPEMLLEGEVVKVGEQSIHIVVLGFSSAVIADEDIREDF 120
Query: 511 RYKIKHGEEVFASSSHKRHVIKVGTMIRFLVKRFDEEVLHISGSLLPANTGCIKWLEQHI 690
+YKIKHG+EVF S S+K+H IKVGT +RF VK FDEE+LHI GSL+P NTG I+WLE
Sbjct: 121 KYKIKHGKEVFVSRSNKKHRIKVGTTLRFSVKNFDEEILHICGSLIPDNTGNIQWLETKA 180
Query: 691 DEGSQSERTTKKR 729
+E SQ+ T+KR
Sbjct: 181 EE-SQAYSITEKR 192