BLASTX nr result

ID: Cocculus23_contig00008803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00008803
         (467 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007045627.1| Glutamate receptor isoform 1 [Theobroma caca...    63   5e-08
emb|CBI28942.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vin...    61   2e-07
ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinu...    60   3e-07
ref|XP_002301626.1| Glutamate receptor 3.7 precursor family prot...    57   3e-06

>ref|XP_007045627.1| Glutamate receptor isoform 1 [Theobroma cacao]
           gi|508709562|gb|EOY01459.1| Glutamate receptor isoform 1
           [Theobroma cacao]
          Length = 922

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 36/56 (64%)
 Frame = -2

Query: 334 WFCKERREAQRRHVFDSNQLHLNIFWGLFLLCGSVTLTALNRFLLKKVRIQEDYRR 167
           W CK     +RR  ++ NQLHL  FWGL+LLCG +TL AL  FLL+ VR    YRR
Sbjct: 810 WLCKMGCPGERRKNYEPNQLHLTSFWGLYLLCGCITLAALLIFLLRMVRQFVRYRR 865


>emb|CBI28942.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 36/56 (64%)
 Frame = -2

Query: 334 WFCKERREAQRRHVFDSNQLHLNIFWGLFLLCGSVTLTALNRFLLKKVRIQEDYRR 167
           WFCK      RR   + NQLH+  FWGL+LLCGS+TL AL  FLL+ +R    Y+R
Sbjct: 732 WFCKMGCPGWRRRKSEPNQLHMISFWGLYLLCGSITLIALLVFLLRTIRQFARYKR 787


>ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vinifera]
          Length = 909

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 36/56 (64%)
 Frame = -2

Query: 334 WFCKERREAQRRHVFDSNQLHLNIFWGLFLLCGSVTLTALNRFLLKKVRIQEDYRR 167
           WFCK      RR   + NQLH+  FWGL+LLCGS+TL AL  FLL+ +R    Y+R
Sbjct: 803 WFCKMGCPGWRRRKSEPNQLHMISFWGLYLLCGSITLIALLVFLLRTIRQFARYKR 858


>ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223536549|gb|EEF38195.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 921

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/56 (51%), Positives = 36/56 (64%)
 Frame = -2

Query: 334 WFCKERREAQRRHVFDSNQLHLNIFWGLFLLCGSVTLTALNRFLLKKVRIQEDYRR 167
           WFCK+    ++R   + NQL L  FWGL+LLCG VTL AL  FLL+ VR    Y+R
Sbjct: 812 WFCKKGCAGEKRQKSEPNQLRLISFWGLYLLCGGVTLAALLLFLLRAVRQFVHYKR 867


>ref|XP_002301626.1| Glutamate receptor 3.7 precursor family protein [Populus
           trichocarpa] gi|222843352|gb|EEE80899.1| Glutamate
           receptor 3.7 precursor family protein [Populus
           trichocarpa]
          Length = 861

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -2

Query: 334 WFCKERREAQRRHVFDSNQLHLNIFWGLFLLCGSVTLTALNRFLLKKVRIQEDYRR 167
           WFCK     +++H    NQL L  FWGL++LCG+  LTAL  FLL+ VR    Y+R
Sbjct: 755 WFCKMGCHGEKKHGDGPNQLKLTSFWGLYILCGAFALTALVVFLLRMVRQFVRYKR 810


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