BLASTX nr result
ID: Cocculus23_contig00008764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00008764
(1146 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007099718.1| Ribosome recycling factor [Theobroma cacao] ... 288 2e-75
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus... 288 4e-75
ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ... 284 4e-74
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera] 284 4e-74
ref|XP_002298606.1| hypothetical protein POPTR_0001s34130g [Popu... 282 2e-73
ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [S... 280 8e-73
ref|XP_003580029.1| PREDICTED: ribosome-recycling factor-like [B... 279 2e-72
ref|XP_006857385.1| hypothetical protein AMTR_s00067p00134010 [A... 277 7e-72
ref|XP_006447119.1| hypothetical protein CICLE_v10016267mg [Citr... 276 2e-71
ref|XP_006408549.1| hypothetical protein EUTSA_v10021359mg [Eutr... 275 2e-71
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ... 275 3e-71
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana... 275 3e-71
ref|NP_001149112.1| LOC100282734 [Zea mays] gi|195624822|gb|ACG3... 274 4e-71
ref|XP_004511047.1| PREDICTED: ribosome-recycling factor-like is... 274 6e-71
ref|XP_004511046.1| PREDICTED: ribosome-recycling factor-like is... 274 6e-71
gb|EMT24181.1| Ribosome-recycling factor [Aegilops tauschii] 273 8e-71
gb|EMS62905.1| Ribosome-recycling factor [Triticum urartu] 273 8e-71
ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group] g... 273 8e-71
dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare] 273 8e-71
gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japo... 273 8e-71
>ref|XP_007099718.1| Ribosome recycling factor [Theobroma cacao]
gi|508728416|gb|EOY20313.1| Ribosome recycling factor
[Theobroma cacao]
Length = 264
Score = 288 bits (738), Expect = 2e-75
Identities = 152/213 (71%), Positives = 174/213 (81%), Gaps = 3/213 (1%)
Frame = -1
Query: 900 FDFL--SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIR 730
FDFL SRRGFA TIE+ PD+GP +KA+AASQMD AIVALSREL+K+R
Sbjct: 51 FDFLRDSRRGFAKGKKSKDDSGGN-TIELAPDIGPTVKASAASQMDAAIVALSRELAKLR 109
Query: 729 TGRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLG 550
TGRASAGMLDHIIVET GVKM LN +AVVSV+DS+TLS+ PYDPN IKELE IVSSPLG
Sbjct: 110 TGRASAGMLDHIIVETGGVKMQLNHLAVVSVIDSKTLSINPYDPNTIKELESAIVSSPLG 169
Query: 549 LNPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSK 370
LNP+VDGQRLI IP LTKEH+QAMCKVV KS EDVKQSIRRARQKA+D +KKA S K
Sbjct: 170 LNPRVDGQRLIAAIPPLTKEHMQAMCKVVAKSSEDVKQSIRRARQKALDAIKKAGSSFPK 229
Query: 369 DDVKRFEKEVEELTKKFIKSAEDMCKLKEKEIT 271
D+ KR EKE++ELTK+ +K+A+D+CK KEKEIT
Sbjct: 230 DEAKRLEKEIDELTKRLVKAADDLCKAKEKEIT 262
>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
gi|223549449|gb|EEF50937.1| ribosome recycling factor,
putative [Ricinus communis]
Length = 262
Score = 288 bits (736), Expect = 4e-75
Identities = 149/214 (69%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Frame = -1
Query: 909 RLGFDFLSRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKI 733
R F SRRGFA T++V PD+GP +K +AA QM+ AIV+LSREL+K+
Sbjct: 48 RCNFLIDSRRGFAKGKKSKDDSGGG-TVQVTPDIGPAVKESAALQMEAAIVSLSRELTKL 106
Query: 732 RTGRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPL 553
RTGRASAGMLDHIIVET GVKM LNR+AVV+V+D +TLSV PYDPN++ LE IVSSPL
Sbjct: 107 RTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYDPNMVSALEKAIVSSPL 166
Query: 552 GLNPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMS 373
GLNP+VDG+RLI IP LTKEH+QAMCKVV KSCE+VKQS+RRARQKA+DT+KKA S++S
Sbjct: 167 GLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRARQKALDTIKKAGSNLS 226
Query: 372 KDDVKRFEKEVEELTKKFIKSAEDMCKLKEKEIT 271
KDDVKR EKEV+ELTKKF+KSAED+CK KEKEIT
Sbjct: 227 KDDVKRLEKEVDELTKKFVKSAEDICKAKEKEIT 260
>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
gi|296090242|emb|CBI40061.3| unnamed protein product
[Vitis vinifera]
Length = 258
Score = 284 bits (727), Expect = 4e-74
Identities = 152/211 (72%), Positives = 172/211 (81%), Gaps = 3/211 (1%)
Frame = -1
Query: 897 DFL--SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRT 727
DFL SRRGFA T+EVVPD+GP +K A SQMD A+VALSRELSK+RT
Sbjct: 46 DFLRESRRGFAKGRKSKDSDAGN-TVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLRT 104
Query: 726 GRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGL 547
GRASAGMLDHIIVET GVKM L+R+AVVSVLD +TLSVTPYD + +K+LE+ IVSSPLGL
Sbjct: 105 GRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLGL 164
Query: 546 NPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKD 367
NP+ DG+RLI IP LTKEH+QAMCKVV KSCEDVKQSIRRARQKA+D +KKA S + KD
Sbjct: 165 NPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDMIKKAGSSLPKD 224
Query: 366 DVKRFEKEVEELTKKFIKSAEDMCKLKEKEI 274
KR EKEV+ELTKKF+KSAEDMCK KEKEI
Sbjct: 225 VAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255
>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
Length = 258
Score = 284 bits (727), Expect = 4e-74
Identities = 152/211 (72%), Positives = 172/211 (81%), Gaps = 3/211 (1%)
Frame = -1
Query: 897 DFL--SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRT 727
DFL SRRGFA T+EVVPD+GP +K A SQMD A+VALSRELSK+RT
Sbjct: 46 DFLRESRRGFAKGRKSKDSDAGN-TVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLRT 104
Query: 726 GRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGL 547
GRASAGMLDHIIVET GVKM L+R+AVVSVLD +TLSVTPYD + +K+LE+ IVSSPLGL
Sbjct: 105 GRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLGL 164
Query: 546 NPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKD 367
NP+ DG+RLI IP LTKEH+QAMCKVV KSCEDVKQSIRRARQKA+D +KKA S + KD
Sbjct: 165 NPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDXIKKAGSSLPKD 224
Query: 366 DVKRFEKEVEELTKKFIKSAEDMCKLKEKEI 274
KR EKEV+ELTKKF+KSAEDMCK KEKEI
Sbjct: 225 VAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255
>ref|XP_002298606.1| hypothetical protein POPTR_0001s34130g [Populus trichocarpa]
gi|222845864|gb|EEE83411.1| hypothetical protein
POPTR_0001s34130g [Populus trichocarpa]
Length = 273
Score = 282 bits (721), Expect = 2e-73
Identities = 153/223 (68%), Positives = 173/223 (77%), Gaps = 9/223 (4%)
Frame = -1
Query: 915 SHRL------GFDFL--SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAI 763
SH+L FDFL SRRGFA GT+E V D+GP +K TA SQMD A+
Sbjct: 49 SHKLPSATLPSFDFLKQSRRGFAKGKNKSKDDSAGGTVEFV-DIGPTVKETANSQMDAAV 107
Query: 762 VALSRELSKIRTGRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKE 583
VALSREL K+RTGRASAGMLDHIIVET GVK+ LNR AVVSV+D++TLSV PYDPN +K+
Sbjct: 108 VALSRELQKLRTGRASAGMLDHIIVETDGVKLPLNRSAVVSVMDAKTLSVNPYDPNTLKQ 167
Query: 582 LEHTIVSSPLGLNPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAID 403
LE+ IVSSPLGLNPQ DG RLI IP LTKEH QAMCKVV KSCED +QSIRRARQKA+D
Sbjct: 168 LENAIVSSPLGLNPQRDGDRLIAAIPPLTKEHTQAMCKVVAKSCEDCRQSIRRARQKAMD 227
Query: 402 TMKKAASHMSKDDVKRFEKEVEELTKKFIKSAEDMCKLKEKEI 274
T+KKA S KDD K+ EKE+EE+TKKF+KSAEDMC KEKEI
Sbjct: 228 TVKKAGSSFPKDDAKKLEKEIEEMTKKFVKSAEDMCNNKEKEI 270
>ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [Sorghum bicolor]
gi|241939276|gb|EES12421.1| hypothetical protein
SORBIDRAFT_06g020970 [Sorghum bicolor]
Length = 258
Score = 280 bits (716), Expect = 8e-73
Identities = 148/227 (65%), Positives = 178/227 (78%), Gaps = 1/227 (0%)
Frame = -1
Query: 942 SLWGAYYGGSHRLGFDFLSRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTA 766
SL GA RL F F +RRGFA T++ VPD+GP +K+ A +QMD A
Sbjct: 35 SLAGAGEFAPSRL-FVFENRRGFAKGKKSKDDRGD--TVQAVPDIGPTVKSAATAQMDAA 91
Query: 765 IVALSRELSKIRTGRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIK 586
++ALSRELSK+RTGRA+ GMLDHI+VE +GVK++LNR+AVVSVLD+ TLSV PYDP +K
Sbjct: 92 VIALSRELSKLRTGRATPGMLDHIMVENAGVKVALNRIAVVSVLDAHTLSVMPYDPTSMK 151
Query: 585 ELEHTIVSSPLGLNPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAI 406
+EH I+SSPLG+NP DG R+I IP LTKE++QA+CKVVTKS ED KQSIRRARQKA+
Sbjct: 152 SIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKAL 211
Query: 405 DTMKKAASHMSKDDVKRFEKEVEELTKKFIKSAEDMCKLKEKEITSS 265
DT+KK+AS M KDDVKR EKEVEELTKKFIKSA+DMCK KEKEI+ S
Sbjct: 212 DTIKKSASSMPKDDVKRIEKEVEELTKKFIKSADDMCKAKEKEISGS 258
>ref|XP_003580029.1| PREDICTED: ribosome-recycling factor-like [Brachypodium distachyon]
Length = 261
Score = 279 bits (713), Expect = 2e-72
Identities = 142/213 (66%), Positives = 174/213 (81%), Gaps = 1/213 (0%)
Frame = -1
Query: 900 FDFLSRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTG 724
F F +RRGFA T+E VPD+GP +K+TA +QM+TA+VALSRELSK+RTG
Sbjct: 50 FLFEARRGFAKGKKSKNDSRGD-TVEAVPDIGPTVKSTATAQMETAVVALSRELSKLRTG 108
Query: 723 RASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLN 544
RAS GMLDHI+VET+ K+ LNR+AVVSVLD+ TLSV PYDP+ +K +E+ IVSSPLG+N
Sbjct: 109 RASPGMLDHIMVETADTKVGLNRIAVVSVLDAHTLSVMPYDPSSMKSIENAIVSSPLGIN 168
Query: 543 PQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDD 364
P DG R+I PIP LTKE++QA+CKVVTKS ED KQSIRRARQKA+DT+KK++S M KDD
Sbjct: 169 PTPDGNRIIAPIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSSSSMPKDD 228
Query: 363 VKRFEKEVEELTKKFIKSAEDMCKLKEKEITSS 265
+KR EKEVEE+TKKFIKSA+DMCK KEKEI+ +
Sbjct: 229 IKRLEKEVEEMTKKFIKSADDMCKAKEKEISGN 261
>ref|XP_006857385.1| hypothetical protein AMTR_s00067p00134010 [Amborella trichopoda]
gi|548861478|gb|ERN18852.1| hypothetical protein
AMTR_s00067p00134010 [Amborella trichopoda]
Length = 203
Score = 277 bits (708), Expect = 7e-72
Identities = 141/189 (74%), Positives = 164/189 (86%), Gaps = 1/189 (0%)
Frame = -1
Query: 828 IEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASAGMLDHIIVETSGVKMSLNRV 652
I+VVPDVGP +KATA SQM+ AIV+LSREL+K+RTGRASAGMLDHII E +GV+ L+RV
Sbjct: 15 IQVVPDVGPGVKATALSQMEAAIVSLSRELNKLRTGRASAGMLDHIITEANGVRTPLSRV 74
Query: 651 AVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVDGQRLIVPIPKLTKEHVQAMC 472
AVVSVLDSQTLSVTPYDPN +KE+E I+SSPLGLNP DGQRLI IP LTKEH+QAMC
Sbjct: 75 AVVSVLDSQTLSVTPYDPNALKEVERAIISSPLGLNPTADGQRLIASIPPLTKEHMQAMC 134
Query: 471 KVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRFEKEVEELTKKFIKSAEDMCK 292
KVV K+ EDVK SIRRAR A+DT+KKAAS +SKDD K+ EKEV+++TKKF+KSA+DMCK
Sbjct: 135 KVVAKASEDVKLSIRRARHNALDTIKKAASCISKDDAKKLEKEVDDMTKKFVKSADDMCK 194
Query: 291 LKEKEITSS 265
KEKEIT S
Sbjct: 195 EKEKEITGS 203
>ref|XP_006447119.1| hypothetical protein CICLE_v10016267mg [Citrus clementina]
gi|568831536|ref|XP_006470018.1| PREDICTED:
ribosome-recycling factor, chloroplastic-like [Citrus
sinensis] gi|557549730|gb|ESR60359.1| hypothetical
protein CICLE_v10016267mg [Citrus clementina]
Length = 268
Score = 276 bits (705), Expect = 2e-71
Identities = 144/211 (68%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
Frame = -1
Query: 903 GFDFLSRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRT 727
GF RRGFA T+E+V D+GP +K T SQM+ AIVALSREL+K+RT
Sbjct: 56 GFMQGCRRGFAKGKRSKDDSGAGSTVEIV-DIGPTVKETTVSQMEAAIVALSRELTKLRT 114
Query: 726 GRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGL 547
GRAS GMLDHIIVET GVKM LN +AVVSVLDS+TLS+ PYDPN +KELE IVSSPLGL
Sbjct: 115 GRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGL 174
Query: 546 NPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKD 367
NP+VDGQRLI IP LTKEH+QAMCKVV K+ EDVKQSIRR+RQKA+D MKKA S + KD
Sbjct: 175 NPRVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSSLPKD 234
Query: 366 DVKRFEKEVEELTKKFIKSAEDMCKLKEKEI 274
+KR EKE++ELTKK++KSA+D+CK KEKEI
Sbjct: 235 QMKRLEKEIDELTKKYVKSADDICKAKEKEI 265
>ref|XP_006408549.1| hypothetical protein EUTSA_v10021359mg [Eutrema salsugineum]
gi|557109695|gb|ESQ50002.1| hypothetical protein
EUTSA_v10021359mg [Eutrema salsugineum]
Length = 258
Score = 275 bits (704), Expect = 2e-71
Identities = 143/208 (68%), Positives = 170/208 (81%), Gaps = 1/208 (0%)
Frame = -1
Query: 888 SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASA 712
SRRGFA ++V PD+GP +K TA+SQM+ AI ALSR+L+K+RTGRA+
Sbjct: 54 SRRGFAKSKKSTSVL-----VDVAPDIGPSVKETASSQMEAAIDALSRDLTKLRTGRAAP 108
Query: 711 GMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVD 532
GMLDHIIVET GVKM LN +A+VSVLD +TLSV PYDP+ +KELE IVSSPLGLNP++D
Sbjct: 109 GMLDHIIVETEGVKMPLNHLALVSVLDPKTLSVNPYDPDTLKELEKAIVSSPLGLNPKLD 168
Query: 531 GQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRF 352
GQRL+ IP LTKEHVQAMCK+VTKS E VKQSIRRARQKA+DT++KA S + KD+VKR
Sbjct: 169 GQRLVASIPALTKEHVQAMCKIVTKSSEAVKQSIRRARQKALDTIRKAGSSLPKDEVKRL 228
Query: 351 EKEVEELTKKFIKSAEDMCKLKEKEITS 268
EKEVEELTKKF+KSAE+MCK KEKEIT+
Sbjct: 229 EKEVEELTKKFVKSAEEMCKSKEKEITT 256
>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
Length = 267
Score = 275 bits (702), Expect = 3e-71
Identities = 143/214 (66%), Positives = 172/214 (80%), Gaps = 3/214 (1%)
Frame = -1
Query: 897 DFL--SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRT 727
DFL SRRGFA ++ PD+GP +KA A+SQM+ AI ALSR+L+K+RT
Sbjct: 55 DFLRDSRRGFAKGKKSKDDSGTGM-VDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRT 113
Query: 726 GRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGL 547
GRA+ GMLDHI+VET GVKM LN +A+VSVLD +TLSV PYDP+ +KELE IV+SPLGL
Sbjct: 114 GRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGL 173
Query: 546 NPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKD 367
NP++DGQRL+ IP LTKEH+QAMCK+VTKS E VKQSIRRARQKA+DT+KKA S + KD
Sbjct: 174 NPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPKD 233
Query: 366 DVKRFEKEVEELTKKFIKSAEDMCKLKEKEITSS 265
+VKR EKEV+ELTKKF+KSAEDMCK KEKEIT +
Sbjct: 234 EVKRLEKEVDELTKKFVKSAEDMCKSKEKEITEA 267
>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
recycling factor [Arabidopsis thaliana]
gi|62319213|dbj|BAD94407.1| putative ribosome recycling
factor [Arabidopsis thaliana]
gi|332640195|gb|AEE73716.1| ribosome recycling factor
[Arabidopsis thaliana]
Length = 267
Score = 275 bits (702), Expect = 3e-71
Identities = 143/214 (66%), Positives = 172/214 (80%), Gaps = 3/214 (1%)
Frame = -1
Query: 897 DFL--SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRT 727
DFL SRRGFA ++ PD+GP +KA A+SQM+ AI ALSR+L+K+RT
Sbjct: 55 DFLRDSRRGFAKGKKSKDDSGTGM-VDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRT 113
Query: 726 GRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGL 547
GRA+ GMLDHI+VET GVKM LN +A+VSVLD +TLSV PYDP+ +KELE IV+SPLGL
Sbjct: 114 GRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGL 173
Query: 546 NPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKD 367
NP++DGQRL+ IP LTKEH+QAMCK+VTKS E VKQSIRRARQKA+DT+KKA S + KD
Sbjct: 174 NPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPKD 233
Query: 366 DVKRFEKEVEELTKKFIKSAEDMCKLKEKEITSS 265
+VKR EKEV+ELTKKF+KSAEDMCK KEKEIT +
Sbjct: 234 EVKRLEKEVDELTKKFVKSAEDMCKSKEKEITEA 267
>ref|NP_001149112.1| LOC100282734 [Zea mays] gi|195624822|gb|ACG34241.1| ribosome
recycling factor [Zea mays] gi|238015350|gb|ACR38710.1|
unknown [Zea mays] gi|413918761|gb|AFW58693.1| Ribosome
recycling factor [Zea mays]
Length = 259
Score = 274 bits (701), Expect = 4e-71
Identities = 142/228 (62%), Positives = 176/228 (77%), Gaps = 5/228 (2%)
Frame = -1
Query: 933 GAYYGGSHRLG----FDFLSRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDT 769
GA G+ L F F +RRGFA T++ VPD+GP +K+ A +QMD
Sbjct: 34 GASLAGAGELAPAQLFFFENRRGFAKGKKSKDDRGD--TVQAVPDIGPTVKSAATAQMDA 91
Query: 768 AIVALSRELSKIRTGRASAGMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNII 589
A++ALSRELSK+RTGRA+ GMLDHI+VE + VK++LNR+AVVSVLD+ TLSV PYDP +
Sbjct: 92 AVIALSRELSKLRTGRATPGMLDHIMVENADVKVALNRIAVVSVLDAHTLSVMPYDPTSM 151
Query: 588 KELEHTIVSSPLGLNPQVDGQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKA 409
K +EH I+SSPLG+NP DG R+I IP LTKE++QA+CKVVTKS ED KQSIRRARQKA
Sbjct: 152 KSIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKA 211
Query: 408 IDTMKKAASHMSKDDVKRFEKEVEELTKKFIKSAEDMCKLKEKEITSS 265
+DT+KK+AS M KDDVKR EKE+EELTKKFIKS++DMCK KEKEI+ +
Sbjct: 212 LDTIKKSASSMPKDDVKRIEKEIEELTKKFIKSSDDMCKAKEKEISGN 259
>ref|XP_004511047.1| PREDICTED: ribosome-recycling factor-like isoform X2 [Cicer
arietinum]
Length = 263
Score = 274 bits (700), Expect = 6e-71
Identities = 141/188 (75%), Positives = 162/188 (86%), Gaps = 1/188 (0%)
Frame = -1
Query: 831 TIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASAGMLDHIIVETSGVKMSLNR 655
T+EV P+VGP IKATAASQM+ A+ ALS ELSK+RTGRASAGMLDHIIVET GVKM+LNR
Sbjct: 74 TVEVPPNVGPNIKATAASQMEAAVAALSAELSKLRTGRASAGMLDHIIVETGGVKMALNR 133
Query: 654 VAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVDGQRLIVPIPKLTKEHVQAM 475
VA+VSVLD +TLSV PYDP +K+LE+ IVSSPLGLNP+ DG RLI IP LTKEH+QAM
Sbjct: 134 VALVSVLDPKTLSVNPYDPETLKQLENAIVSSPLGLNPKTDGDRLIAVIPPLTKEHMQAM 193
Query: 474 CKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRFEKEVEELTKKFIKSAEDMC 295
KVVTKSCED +QSIRR+RQKA+D +KK S + KDD+KR EKEVE+LTKKFIK+AED C
Sbjct: 194 NKVVTKSCEDTRQSIRRSRQKAMDAIKKLNSVLPKDDIKRLEKEVEDLTKKFIKTAEDTC 253
Query: 294 KLKEKEIT 271
K KEKEIT
Sbjct: 254 KAKEKEIT 261
>ref|XP_004511046.1| PREDICTED: ribosome-recycling factor-like isoform X1 [Cicer
arietinum]
Length = 285
Score = 274 bits (700), Expect = 6e-71
Identities = 141/188 (75%), Positives = 162/188 (86%), Gaps = 1/188 (0%)
Frame = -1
Query: 831 TIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASAGMLDHIIVETSGVKMSLNR 655
T+EV P+VGP IKATAASQM+ A+ ALS ELSK+RTGRASAGMLDHIIVET GVKM+LNR
Sbjct: 96 TVEVPPNVGPNIKATAASQMEAAVAALSAELSKLRTGRASAGMLDHIIVETGGVKMALNR 155
Query: 654 VAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVDGQRLIVPIPKLTKEHVQAM 475
VA+VSVLD +TLSV PYDP +K+LE+ IVSSPLGLNP+ DG RLI IP LTKEH+QAM
Sbjct: 156 VALVSVLDPKTLSVNPYDPETLKQLENAIVSSPLGLNPKTDGDRLIAVIPPLTKEHMQAM 215
Query: 474 CKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRFEKEVEELTKKFIKSAEDMC 295
KVVTKSCED +QSIRR+RQKA+D +KK S + KDD+KR EKEVE+LTKKFIK+AED C
Sbjct: 216 NKVVTKSCEDTRQSIRRSRQKAMDAIKKLNSVLPKDDIKRLEKEVEDLTKKFIKTAEDTC 275
Query: 294 KLKEKEIT 271
K KEKEIT
Sbjct: 276 KAKEKEIT 283
>gb|EMT24181.1| Ribosome-recycling factor [Aegilops tauschii]
Length = 260
Score = 273 bits (699), Expect = 8e-71
Identities = 141/208 (67%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Frame = -1
Query: 885 RRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASAG 709
RRGFA T+E PD+GP +K+ A +QMDTA+VALSRELSK+RTGRAS G
Sbjct: 54 RRGFAKGKKSKNDSRSD-TVEAAPDIGPTVKSAATAQMDTAVVALSRELSKLRTGRASPG 112
Query: 708 MLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVDG 529
MLDHI+VET VK+ L+R+AVVSVLDS TLSV PYDPN +K +E+ I SSPLG+NP DG
Sbjct: 113 MLDHIMVETGDVKVGLSRIAVVSVLDSHTLSVMPYDPNTMKSIENAIASSPLGINPTPDG 172
Query: 528 QRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRFE 349
R+I +P LTKE +QAMCKVVTKS ED KQSIRRARQKA+DT+KK++S M KDD+KR E
Sbjct: 173 SRIIAAVPPLTKETMQAMCKVVTKSAEDFKQSIRRARQKALDTIKKSSSSMPKDDIKRLE 232
Query: 348 KEVEELTKKFIKSAEDMCKLKEKEITSS 265
KEVEELTKKFIKSA+DMCK KEKEI+ S
Sbjct: 233 KEVEELTKKFIKSADDMCKAKEKEISGS 260
>gb|EMS62905.1| Ribosome-recycling factor [Triticum urartu]
Length = 260
Score = 273 bits (699), Expect = 8e-71
Identities = 141/208 (67%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Frame = -1
Query: 885 RRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASAG 709
RRGFA T+E PD+GP +K+ A +QMDTA+VALSRELSK+RTGRAS G
Sbjct: 54 RRGFAKGKKSKNDSRSD-TVEAAPDIGPTVKSAATAQMDTAVVALSRELSKLRTGRASPG 112
Query: 708 MLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVDG 529
MLDHI+VET VK+ L+R+AVVSVLDS TLSV PYDPN +K +E+ I SSPLG+NP DG
Sbjct: 113 MLDHIMVETGDVKVGLSRIAVVSVLDSHTLSVMPYDPNTMKSIENAIASSPLGINPTPDG 172
Query: 528 QRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRFE 349
R+I +P LTKE +QAMCKVVTKS ED KQSIRRARQKA+DT+KK++S M KDD+KR E
Sbjct: 173 SRIIAAVPPLTKETMQAMCKVVTKSAEDFKQSIRRARQKALDTIKKSSSSMPKDDIKRLE 232
Query: 348 KEVEELTKKFIKSAEDMCKLKEKEITSS 265
KEVEELTKKFIKSA+DMCK KEKEI+ S
Sbjct: 233 KEVEELTKKFIKSADDMCKAKEKEISGS 260
>ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group]
gi|21740669|emb|CAD41132.1| OSJNBa0084K20.10 [Oryza
sativa Japonica Group] gi|38347444|emb|CAE02486.2|
OSJNBa0076N16.8 [Oryza sativa Japonica Group]
gi|113564734|dbj|BAF15077.1| Os04g0490400 [Oryza sativa
Japonica Group] gi|125548818|gb|EAY94640.1| hypothetical
protein OsI_16419 [Oryza sativa Indica Group]
gi|215704152|dbj|BAG92992.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 260
Score = 273 bits (699), Expect = 8e-71
Identities = 140/209 (66%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
Frame = -1
Query: 888 SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASA 712
+RRGFA T++ PD+GP +K+ A QM+ A+VALSRELSK+RTGRAS
Sbjct: 53 ARRGFAKGKKSKDDGRGD-TVQDAPDIGPTVKSAATQQMEAAVVALSRELSKLRTGRASP 111
Query: 711 GMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVD 532
GMLDHI+VET+GVK++LNR+AVVSVLD+ TLSV PYDP+ +K +EH I+SSPLG+NP D
Sbjct: 112 GMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYDPSSMKSIEHAIISSPLGINPTPD 171
Query: 531 GQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRF 352
G R+I IP LTKE++QA+CKVVTKS ED KQSIRRARQKA+DT+KK+AS M KDDVKR
Sbjct: 172 GNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSASGMPKDDVKRL 231
Query: 351 EKEVEELTKKFIKSAEDMCKLKEKEITSS 265
EKEVEELTKKFIKSA+DMCK KEKEI+ +
Sbjct: 232 EKEVEELTKKFIKSADDMCKAKEKEISGN 260
>dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 260
Score = 273 bits (699), Expect = 8e-71
Identities = 141/208 (67%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Frame = -1
Query: 885 RRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASAG 709
RRGFA T+E PD+GP +K+ A +QMDTA+VALSRELSK+RTGRAS G
Sbjct: 54 RRGFAKGKKSKNDSRGD-TVEAAPDIGPTVKSAATAQMDTAVVALSRELSKLRTGRASPG 112
Query: 708 MLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVDG 529
MLDHI+VET VK+ L+R+AVVSVLDS TLSV PYDPN +K +E+ I SSPLG+NP DG
Sbjct: 113 MLDHIMVETGDVKVGLSRIAVVSVLDSHTLSVMPYDPNTMKSIENAIASSPLGINPTPDG 172
Query: 528 QRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRFE 349
R+I +P LTKE +QAMCKVVTKS ED KQSIRRARQKA+DT+KK++S M KDD+KR E
Sbjct: 173 SRIIAAVPPLTKETMQAMCKVVTKSAEDFKQSIRRARQKALDTIKKSSSSMPKDDIKRLE 232
Query: 348 KEVEELTKKFIKSAEDMCKLKEKEITSS 265
KEVEELTKKFIKSA+DMCK KEKEI+ S
Sbjct: 233 KEVEELTKKFIKSADDMCKAKEKEISGS 260
>gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japonica Group]
Length = 260
Score = 273 bits (699), Expect = 8e-71
Identities = 140/209 (66%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
Frame = -1
Query: 888 SRRGFAXXXXXXXXXXXXGTIEVVPDVGP-IKATAASQMDTAIVALSRELSKIRTGRASA 712
+RRGFA T++ PD+GP +K+ A QM+ A+VALSRELSK+RTGRAS
Sbjct: 53 ARRGFAKGKKSKDDGRGD-TVQDAPDIGPTVKSAATQQMEAAVVALSRELSKLRTGRASP 111
Query: 711 GMLDHIIVETSGVKMSLNRVAVVSVLDSQTLSVTPYDPNIIKELEHTIVSSPLGLNPQVD 532
GMLDHI+VET+GVK++LNR+AVVSVLD+ TLSV PYDP+ +K +EH I+SSPLG+NP D
Sbjct: 112 GMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYDPSSMKSIEHAIISSPLGINPTPD 171
Query: 531 GQRLIVPIPKLTKEHVQAMCKVVTKSCEDVKQSIRRARQKAIDTMKKAASHMSKDDVKRF 352
G R+I IP LTKE++QA+CKVVTKS ED KQSIRRARQKA+DT+KK+AS M KDDVKR
Sbjct: 172 GNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSASGMPKDDVKRL 231
Query: 351 EKEVEELTKKFIKSAEDMCKLKEKEITSS 265
EKEVEELTKKFIKSA+DMCK KEKEI+ +
Sbjct: 232 EKEVEELTKKFIKSADDMCKAKEKEISGN 260